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ONTOLOGY REPORT - ANNOTATIONS

Term:auditory receptor cell stereocilium organization
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Accession:GO:0060088 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.
Synonyms:exact_synonym: auditory receptor cell stereocilium organisation
 related_synonym: auditory receptor cell stereocilium organization and biogenesis


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auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD24 ankyrin repeat domain 24 involved_in ISO (MGI:6885507|PMID:35175278) UniProt PMID:35175278 MGI:6885507 NCBI chr20:55,391,381...55,404,538
Ensembl chr20:55,391,652...55,404,544 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G CDH23 cadherin related 23 acts_upstream_of_or_within ISO (PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:11322776)
(PMID:12121736)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:15537665)		 MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chr 4:22,206,972...22,570,875
Ensembl chr 4:22,207,001...22,571,131 		JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chr12:14,160,524...14,318,174
Ensembl chr12:14,144,390...14,318,582 		JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487), (PMID:19423712) Ensembl
MGI		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr23:45,512,639...45,551,010
Ensembl chr23:45,513,416...45,551,178 		JBrowse link
G CLRN2 clarin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:62,958,242...62,967,878
Ensembl chr 3:62,959,224...62,967,994 		JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
MGI		 PMID:30380417 GO_REF:0000107 NCBI chr 2:40,310,285...40,330,200
Ensembl chr 2:40,315,807...40,328,240 		JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15905332)
(PMID:17876667), (PMID:23217710)		 Ensembl
MGI		 PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 NCBI chr12:4,919,732...4,936,823
Ensembl chr12:4,902,832...4,936,413 		JBrowse link
G MYO3A myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr 2:7,455,125...7,695,483
Ensembl chr 2:7,455,625...7,696,043 		JBrowse link
G MYO3B myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr36:14,804,662...15,229,597
Ensembl chr36:14,803,514...15,209,820 		JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12121736)
(PMID:11753415)
(PMID:17050716)		 Ensembl
MGI		 PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 NCBI chr21:21,539,735...21,624,063
Ensembl chr21:21,539,785...21,624,279 		JBrowse link
G NHERF1 NHERF family PDZ scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24920589) Ensembl
MGI		 PMID:24920589 GO_REF:0000107 NCBI chr 9:5,661,792...5,679,783
Ensembl chr 9:5,662,464...5,679,570 		JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:16887306)
(PMID:23217710)
(PMID:15537665)
(PMID:11124469)
(PMID:10978835)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr26:33,426,728...34,589,208
Ensembl chr26:33,719,839...34,588,017 		JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24334608) Ensembl
TreeGrafter
MGI		 PMID:24334608 GO_REF:0000107 GO_REF:0000118 NCBI chr28:13,693,032...13,711,654
Ensembl chr28:13,693,023...13,711,784 		JBrowse link
G PLS1 plastin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,243,631...38,347,195
Ensembl chr23:38,243,024...38,347,202 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388 		JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,823,053...23,041,765
Ensembl chr35:22,824,106...23,041,743 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SOD1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chr31:26,540,291...26,544,212
Ensembl chr31:26,486,274...26,662,815 		JBrowse link
G STRC stereocilin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18849963)
(PMID:30801007)		 Ensembl
MGI		 PMID:18849963 PMID:30801007 GO_REF:0000107 NCBI chr30:10,444,726...10,459,058
Ensembl chr30:10,444,793...10,460,785 		JBrowse link
G TECTA tectorin alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007) Ensembl
MGI		 PMID:30801007 GO_REF:0000107 NCBI chr 5:12,879,963...12,949,211
Ensembl chr 5:12,879,951...12,949,147 		JBrowse link
G TPRN taperin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
TreeGrafter
MGI		 PMID:30380417 GO_REF:0000107 GO_REF:0000118
G TRIOBP TRIO and F-actin binding protein acts_upstream_of_or_within ISO (PMID:20510926) MGI PMID:20510926 NCBI chr10:26,856,981...26,913,330
Ensembl chr10:26,857,678...26,911,083 		JBrowse link
G WHRN whirlin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27117407) Ensembl
TreeGrafter
MGI		 PMID:27117407 GO_REF:0000107 GO_REF:0000118 NCBI chr11:68,617,383...68,699,824
Ensembl chr11:68,617,377...68,699,977 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17924
    developmental process 6840
      anatomical structure morphogenesis 3003
        embryonic morphogenesis 702
          auditory receptor cell morphogenesis 29
            auditory receptor cell stereocilium organization 25
Path 2
Term Annotations click to browse term
  biological_process 17924
    developmental process 6840
      anatomical structure development 6424
        multicellular organism development 5184
          system development 4514
            nervous system development 2798
              neurogenesis 2079
                generation of neurons 1796
                  neuron differentiation 1714
                    mechanoreceptor differentiation 100
                      inner ear receptor cell differentiation 93
                        inner ear receptor cell development 68
                          auditory receptor cell development 37
                            auditory receptor cell morphogenesis 29
                              auditory receptor cell stereocilium organization 25
paths to the root