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ONTOLOGY REPORT - ANNOTATIONS

Term:establishment of spindle orientation
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Accession:GO:0051294 term browser browse the term
Definition:Any process that set the alignment of spindle relative to other cellular structures.
Synonyms:exact_synonym: orienting of spindle;   spindle orientation

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establishment of spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 acts_upstream_of_or_within ISO (PMID:21822276) MGI PMID:21822276 NCBI chrNW_004624732:23,553,876...23,814,565
Ensembl chrNW_004624732:23,581,356...23,811,640 		JBrowse link
G Kif25 kinesin family member 25 involved_in ISO (PMID:28263957) UniProt PMID:28263957 NCBI chrNW_004624785:11,485,976...11,505,351 JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:3,227,518...3,245,137
Ensembl chrNW_004624849:3,227,758...3,245,118 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:5,329,988...5,376,368
Ensembl chrNW_004624801:5,329,916...5,370,345 		JBrowse link
G Map4 microtubule associated protein 4 acts_upstream_of_or_within ISO (PMID:21822276) MGI PMID:21822276 NCBI chrNW_004624730:73,490,974...73,656,097 JBrowse link
G Spag5 sperm associated antigen 5 acts_upstream_of_or_within ISO (PMID:22031545) MGI PMID:22031545 NCBI chrNW_004624786:1,163,350...1,183,071
Ensembl chrNW_004624786:1,163,606...1,182,764 		JBrowse link
establishment of meiotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mos MOS proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624886:3,934,081...3,935,341
Ensembl chrNW_004624886:3,934,192...3,935,220 		JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 involved_in ISO (PMID:22336914) UniProt PMID:22336914 NCBI chrNW_004624778:13,948,567...13,968,643
Ensembl chrNW_004624778:13,953,390...13,968,683 		JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 involved_in ISO (PMID:22336914) UniProt PMID:22336914 NCBI chrNW_004624776:16,412,683...16,450,784
Ensembl chrNW_004624776:16,413,048...16,445,892 		JBrowse link
establishment of mitotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (MGI:4457234|PMID:19448628)
(PMID:19448628)		 UniProt PMID:19448628 MGI:4457234 NCBI chrNW_004624885:1,314,885...1,362,730
Ensembl chrNW_004624885:1,311,512...1,362,730 		JBrowse link
G Bccip BRCA2 and CDKN1A interacting protein involved_in ISO (PMID:28394342) UniProt PMID:28394342 NCBI chrNW_004624737:21,326,652...21,339,956
Ensembl chrNW_004624737:21,323,309...21,339,970 		JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:14,736,273...14,930,168
Ensembl chrNW_004624760:14,736,104...14,930,119 		JBrowse link
G Cenpa centromere protein A involved_in ISO (PMID:19468067) UniProt PMID:19468067 NCBI chrNW_004624738:8,899,260...8,906,379
Ensembl chrNW_004624738:8,899,362...8,906,373 		JBrowse link
G Dctn1 dynactin subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:29,105,310...29,135,124
Ensembl chrNW_004624749:29,115,561...29,137,276 		JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISO (MGI:5788402|PMID:9448628) UniProt PMID:9448628 MGI:5788402 NCBI chrNW_004624929:969,294...976,420
Ensembl chrNW_004624929:968,823...976,414 		JBrowse link
G Enkd1 enkurin domain containing 1 involved_in ISO (PMID:35197565) UniProt PMID:35197565 NCBI chrNW_004624746:18,676,146...18,686,739
Ensembl chrNW_004624746:18,682,597...18,686,735 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO (PMID:21385765) MGI PMID:21385765 NCBI chrNW_004624744:19,782,174...19,975,496
Ensembl chrNW_004624744:19,782,790...19,977,335 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21764747) Ensembl
MGI		 PMID:21764747 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Gja1 gap junction protein alpha 1 involved_in ISO (PMID:30992345) ARUK-UCL PMID:30992345 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313 		JBrowse link
G Gpsm1 G protein signaling modulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:1,507,255...1,529,170
Ensembl chrNW_004624760:1,507,242...1,529,163 		JBrowse link
G Gpsm2 G protein signaling modulator 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21385765) TreeGrafter
MGI		 PMID:21385765 GO_REF:0000118 NCBI chrNW_004624772:4,634,005...4,704,280
Ensembl chrNW_004624772:4,651,326...4,704,280 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809 		JBrowse link
G Htt huntingtin involved_in ISO (PMID:20696378) UniProt PMID:20696378 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase like 1 involved_in ISO (PMID:27926875) UniProt PMID:27926875 NCBI chrNW_004624817:4,779,875...4,794,644
Ensembl chrNW_004624817:4,779,057...4,793,732 		JBrowse link
G Insc INSC spindle orientation adaptor protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21385765) MGI
TreeGrafter		 PMID:21385765 GO_REF:0000118 NCBI chrNW_004624766:6,935,814...7,016,335
Ensembl chrNW_004624766:6,884,824...7,016,392 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:30992345) ARUK-UCL PMID:30992345 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:34608293) UniProt PMID:34608293 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Mapre1 microtubule associated protein RP/EB family member 1 involved_in ISO (PMID:34608293) UniProt PMID:34608293 NCBI chrNW_004624842:6,416,877...6,444,043 JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO (PMID:21947081) MGI PMID:21947081 NCBI chrNW_004624861:4,373,743...4,556,933 JBrowse link
G Misp mitotic spindle positioning involved_in ISO (PMID:23509069), (PMID:23574715) UniProt PMID:23509069 PMID:23574715 NCBI chrNW_004624828:7,800,424...7,812,035 JBrowse link
G Ndc80 NDC80 kinetochore complex component involved_in ISO (PMID:19468067) UniProt PMID:19468067 NCBI chrNW_004624770:12,937,887...12,974,352
Ensembl chrNW_004624770:12,939,763...12,974,162 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:236,715...284,200
Ensembl chrNW_004624782:236,735...268,516 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,981,963...11,039,504
Ensembl chrNW_004624786:11,000,615...11,034,689 		JBrowse link
G Nsfl1c NSFL1 cofactor involved_in ISO (PMID:23649807) UniProt PMID:23649807 NCBI chrNW_004624741:2,746,853...2,774,038
Ensembl chrNW_004624741:2,748,796...2,774,119 		JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21385765) TreeGrafter
MGI		 PMID:21385765 GO_REF:0000118 NCBI chrNW_004624817:4,896,066...4,963,440
Ensembl chrNW_004624817:4,924,827...4,963,436 		JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22031545) Ensembl
MGI		 PMID:22031545 GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (MGI:5430302|PMID:19959710) UniProt PMID:19959710 MGI:5430302 NCBI chrNW_004624855:4,019,088...4,539,289
Ensembl chrNW_004624855:4,019,056...4,536,324 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO (PMID:23509069) UniProt PMID:23509069 NCBI chrNW_004624782:8,811,593...8,823,060
Ensembl chrNW_004624782:8,811,616...8,826,749 		JBrowse link
G Sapcd2 suppressor APC domain containing 2 involved_in ISO (MGI:5882149|PMID:26766442) UniProt PMID:26766442 MGI:5882149 NCBI chrNW_004624760:843,746...848,104
Ensembl chrNW_004624760:843,760...847,327 		JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:20,326,565...20,350,937
Ensembl chrNW_004624733:20,326,893...20,350,923 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21764747) MGI
Ensembl		 PMID:21764747 GO_REF:0000107 NCBI chrNW_004624777:3,728,984...3,735,373
Ensembl chrNW_004624777:3,731,299...3,735,373 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21764747) Ensembl
MGI		 PMID:21764747 GO_REF:0000107 NCBI chrNW_004624751:20,091,612...20,096,581
Ensembl chrNW_004624751:20,091,609...20,096,563 		JBrowse link
G Ubxn2b UBX domain protein 2B involved_in ISO (PMID:23649807) UniProt PMID:23649807 NCBI chrNW_004624744:33,676,900...33,725,388
Ensembl chrNW_004624744:33,696,129...33,725,383 		JBrowse link
G Zw10 zw10 kinetochore protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:9,221,123...9,255,294
Ensembl chrNW_004624784:9,221,128...9,255,284 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15258
    cellular process 14889
      establishment or maintenance of cell polarity 238
        establishment of cell polarity 158
          establishment of spindle orientation 45
            establishment of meiotic spindle orientation 3
            establishment of mitotic spindle orientation + 36
Path 2
Term Annotations click to browse term
  biological_process 15258
    cellular process 14889
      cellular component organization or biogenesis 6253
        cellular component organization 6063
          organelle organization 3360
            cytoskeleton organization 1386
              microtubule cytoskeleton organization 641
                establishment of spindle localization 58
                  establishment of spindle orientation 45
                    establishment of meiotic spindle orientation 3
                    establishment of mitotic spindle orientation + 36
paths to the root