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vesicle targeting, to, from or within Golgi - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:vesicle targeting, to, from or within Golgi
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Accession:GO:0048199 term browser browse the term
Definition:The process in which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation.
Synonyms:exact_synonym: Golgi vesicle targeting
 narrow_synonym: dictyosome vesicle targeting;   vesicle targeting, to, from or within dictyosome

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show annotations for term's descendants           Sort by:
vesicle targeting, to, from or within Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in IEP
IEA
ISO 		PMID:17101722
GO_REF:0000107
(PMID:17101722) 		Ensembl
RGD		 PMID:17101722 PMID:17101722 GO_REF:0000107, RGD:2317246 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753 		JBrowse link
COPI coating of Golgi vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgap2 ARF GTPase activating protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:77,236,305...77,248,445
Ensembl chr 3:77,236,322...77,248,455 		JBrowse link
G Arfgap3 ARF GTPase activating protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:114,432,873...114,479,206
Ensembl chr 7:114,432,873...114,479,208 		JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO
IEA 		(PMID:12047556), (PMID:17956946)
GO_REF:0000107 		RGD
Ensembl		 PMID:12047556 PMID:17956946 GO_REF:0000107 NCBI chr 1:245,018,535...245,147,052
Ensembl chr 1:245,018,568...245,147,042 		JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 involved_in ISO
IBA
IEA 		(PMID:18287528)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:18287528 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,029,646...9,034,160
Ensembl chr17:9,029,646...9,034,176 		JBrowse link
COPI-coated vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in ISO
IEA
ISS 		(PMID:10052452)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:10052452 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753 		JBrowse link
COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in ISO
IEA
ISS 		(PMID:22358839)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:22358839 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Klhl12 kelch-like family member 12 involved_in IEA
IBA
ISS
ISO 		GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:22358839), (PMID:27716508) 		Ensembl
GO_Central
UniProt
RGD		 PMID:22358839 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643 		JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISO
IEA
ISS 		(PMID:27716508)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189 		JBrowse link
G Pef1 penta-EF hand domain containing 1 involved_in ISO
IBA
IEA
ISS 		(PMID:27716508)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024 		RGD
GO_Central
Ensembl
UniProt		 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067 		JBrowse link
G Preb prolactin regulatory element binding involved_in IDA PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A involved_in ISO
IEA 		(PMID:23433038), (PMID:32358066)
GO_REF:0000107 		RGD
Ensembl		 PMID:23433038 PMID:32358066 GO_REF:0000107 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23433038), (PMID:32358066) 		UniProt
Ensembl
RGD		 PMID:23433038 PMID:32358066 GO_REF:0000024 GO_REF:0000107 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:43,885,542...43,911,976
Ensembl chr11:43,885,661...43,911,976 		JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA
ISS 		(PMID:24618899)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:24618899 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Preb prolactin regulatory element binding involved_in IEA
IBA
ISO 		GO_REF:0000104
GO_REF:0000107
GO_REF:0000033
(PMID:32358066) 		UniProt
Ensembl
GO_Central
RGD		 PMID:32358066 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO
IEA 		(PMID:17005010)
GO_REF:0000107 		RGD
Ensembl		 PMID:17005010 GO_REF:0000107 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273 		JBrowse link
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1ar adaptor-related protein complex 1 associated regulatory protein involved_in ISO
IEA
IBA 		(PMID:19706427)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033 		RGD
Ensembl
InterPro
GO_Central		 PMID:19706427 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:216,276,631...216,309,020
Ensembl chr 2:216,276,631...216,309,013 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO
IEA 		(PMID:15020712)
GO_REF:0000107 		RGD
Ensembl		 PMID:15020712 GO_REF:0000107 NCBI chr10:95,042,451...95,079,679
Ensembl chr10:94,542,946...94,579,846 		JBrowse link
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep19 centrosomal protein 19 involved_in ISS
ISO
IEA
IBA 		GO_REF:0000024
(PMID:28659385)
GO_REF:0000107
GO_REF:0000033 		UniProt
RGD
Ensembl
GO_Central		 PMID:28659385 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:68,677,869...68,687,117
Ensembl chr11:68,677,871...68,687,022 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      vesicle targeting 42
        vesicle targeting, to, from or within Golgi 18
          COPI-coated vesicle budding + 5
          Golgi transport vesicle coating + 4
          regulation of vesicle targeting, to, from or within Golgi 0
          vesicle targeting, cis-Golgi to rough endoplasmic reticulum + 0
          vesicle targeting, inter-Golgi cisterna + 0
          vesicle targeting, rough ER to cis-Golgi + 10
          vesicle targeting, trans-Golgi to endosome + 2
          vesicle targeting, trans-Golgi to periciliary membrane compartment 1
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cellular localization 3706
        establishment of localization in cell 2163
          establishment of vesicle localization 189
            vesicle targeting 42
              vesicle targeting, to, from or within Golgi 18
                COPI-coated vesicle budding + 5
                Golgi transport vesicle coating + 4
                regulation of vesicle targeting, to, from or within Golgi 0
                vesicle targeting, cis-Golgi to rough endoplasmic reticulum + 0
                vesicle targeting, inter-Golgi cisterna + 0
                vesicle targeting, rough ER to cis-Golgi + 10
                vesicle targeting, trans-Golgi to endosome + 2
                vesicle targeting, trans-Golgi to periciliary membrane compartment 1
paths to the root