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Gene: Klhl12 (kelch-like family member 12) Rattus norvegicus

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Symbol:

Klhl12

Name:

kelch-like family member 12

RGD ID:

628717

Description:

Predicted to enable identical protein binding activity and ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in several processes, including COPII vesicle coating; mesenchymal cell differentiation; and protein monoubiquitination. Predicted to be located in centriolar satellite. Predicted to be part of COPII vesicle coat and Cul3-RING ubiquitin ligase complex. Predicted to be active in COPII-coated ER to Golgi transport vesicle. Orthologous to human KLHL12 (kelch like family member 12); PARTICIPATES IN Wnt signaling, canonical pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

C3ip1; CUL3-interacting protein 1; kelch-like 12; kelch-like 12 (Drosophila); kelch-like protein 12; kelch-like protein C3IP1; MGC93127

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KLHL12 (kelch like family member 12)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Klhl12 (kelch-like 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Klhl12 (kelch like family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KLHL12 (kelch like family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KLHL12 (kelch like family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Klhl12 (kelch like family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KLHL12 (kelch like family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KLHL12 (kelch like family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Klhl12 (kelch like family member 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ACACB (acetyl-CoA carboxylase beta)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Klhl12 (kelch-like 12)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	KLHL12 (kelch like family member 12)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	klhl12 (kelch-like family member 12)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	klhl12	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	klhl12	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	48,451,920 - 48,485,638 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	48,455,227 - 48,485,641 (+)	Ensembl				GRCr8
mRatBN7.2	13	45,899,913 - 45,933,648 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	45,899,928 - 45,933,643 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	48,510,471 - 48,539,585 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	49,798,539 - 49,827,653 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	47,062,852 - 47,091,932 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	51,280,933 - 51,314,753 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	51,282,684 - 51,314,797 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	56,337,598 - 56,371,511 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	47,403,579 - 47,433,301 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	46,231,068 - 46,260,077 (+)	NCBI		Celera
RGSC_v3.1	13	47,417,621 - 47,447,343 (+)	NCBI
Cytogenetic Map	13	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adult myoclonic epilepsy 5 (ISO)

gastrointestinal stromal tumor (ISO)

Hypokalemic Periodic Paralysis, Type 1 (ISO)

parathyroid carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

17beta-estradiol 3-benzoate (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

benzene (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

choline (ISO)

cisplatin (ISO)

cocaine (EXP)

doxorubicin (ISO)

endosulfan (EXP)

ethyl methanesulfonate (ISO)

folic acid (ISO)

L-methionine (ISO)

methyl methanesulfonate (ISO)

oxaliplatin (EXP)

paracetamol (EXP)

pentanal (ISO)

perfluorohexanesulfonic acid (ISO)

potassium chromate (ISO)

potassium dichromate (ISO)

resveratrol (ISO)

sodium fluoride (ISO)

sunitinib (ISO)

testosterone (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trovafloxacin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anatomical structure morphogenesis (IEA)

COPII vesicle coating (IBA,IEA,ISO,ISS)

endoplasmic reticulum to Golgi vesicle-mediated transport (IEA,ISO,ISS)

neural crest cell development (IEA,ISO,ISS)

neural crest formation (IEA,ISO,ISS)

proteasome-mediated ubiquitin-dependent protein catabolic process (IBA)

protein monoubiquitination (IEA,ISO,ISS)

protein ubiquitination (IEA)

tissue development (IEA)

vesicle-mediated transport (IEA)

Wnt signaling pathway (IEA,ISO,ISS)

Cellular Component

centriolar satellite (IEA,ISO)

COPII vesicle coat (IEA,ISO,ISS)

COPII-coated ER to Golgi transport vesicle (IBA,IEA,ISO,ISS)

Cul3-RING ubiquitin ligase complex (IBA,IEA,ISO,ISS)

cytoplasm (IBA)

cytoplasmic vesicle (IEA)

Molecular Function

identical protein binding (IEA,ISO)

protein binding (ISO)

ubiquitin-like ligase-substrate adaptor activity (IBA)

Molecular Pathway Annotations Click to see Annotation Detail View

Wnt signaling, canonical pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15489334	PMID:16189514	PMID:20970343	PMID:22358839	PMID:24334870	PMID:25416956	PMID:27107012	PMID:27716508

Genomics

Comparative Map Data

Klhl12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	48,451,920 - 48,485,638 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	48,455,227 - 48,485,641 (+)	Ensembl				GRCr8
mRatBN7.2	13	45,899,913 - 45,933,648 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	45,899,928 - 45,933,643 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	48,510,471 - 48,539,585 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	49,798,539 - 49,827,653 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	47,062,852 - 47,091,932 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	51,280,933 - 51,314,753 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	51,282,684 - 51,314,797 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	56,337,598 - 56,371,511 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	47,403,579 - 47,433,301 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	46,231,068 - 46,260,077 (+)	NCBI		Celera
RGSC_v3.1	13	47,417,621 - 47,447,343 (+)	NCBI
Cytogenetic Map	13	q13	NCBI

KLHL12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	202,891,120 - 202,928,599 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	202,891,116 - 202,928,636 (-)	Ensembl			hg38	GRCh38
GRCh37	1	202,860,248 - 202,897,727 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	201,126,853 - 201,162,994 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	199,591,886 - 199,628,028	NCBI
Celera	1	175,989,447 - 176,025,617 (-)	NCBI		Celera
Cytogenetic Map	1	q32.1	NCBI
HuRef	1	174,025,817 - 174,061,990 (-)	NCBI		HuRef
CHM1_1	1	204,282,479 - 204,318,606 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	202,153,802 - 202,191,306 (-)	NCBI		T2T-CHM13v2.0

Klhl12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	134,383,269 - 134,418,611 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	134,383,269 - 134,418,756 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	134,455,495 - 134,490,880 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	134,455,531 - 134,491,018 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	136,352,132 - 136,387,450 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	136,271,966 - 136,307,284 (+)	NCBI		MGSCv36	mm8
Celera	1	137,062,147 - 137,097,576 (+)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	58.23	NCBI

Klhl12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	38,900,022 - 38,931,374 (-)	Ensembl
ChiLan1.0	NW_004955406	38,903,233 - 38,931,756 (-)	NCBI	ChiLan1.0	ChiLan1.0

KLHL12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	46,451,868 - 46,489,315 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	46,419,800 - 46,456,306 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	178,490,467 - 178,527,919 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	182,785,420 - 182,821,965 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	182,785,420 - 182,821,965 (-)	Ensembl			panPan2	panpan1.1

KLHL12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	256,814 - 284,132 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	311,438 - 338,723 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	266,263 - 293,556 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	249,707 - 293,556 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	254,937 - 282,247 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	364,012 - 391,323 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	386,991 - 414,305 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Klhl12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	72,446,749 - 72,479,474 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936567	1,680,286 - 1,716,235 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936567	1,681,421 - 1,714,150 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KLHL12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	24,869,829 - 24,900,266 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	24,869,816 - 24,902,981 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	29,227,964 - 29,260,937 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KLHL12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	26,479,798 - 26,516,293 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666055	27,256,921 - 27,293,054 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Klhl12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	7,919,700 - 7,948,217 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624807	7,919,216 - 7,948,254 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Klhl12
243 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	114
Count of miRNA genes:	104
Interacting mature miRNAs:	108
Transcripts:	ENSRNOT00000005832
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37216241	90057603	Rat
9589141	Insul28	Insulin level QTL 28	10.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	13	11866254	56866254	Rat
6893344	Cm79	Cardiac mass QTL 79	1.5	0.04	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	46272922	51216694	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
61391	Bp5	Blood pressure QTL 5	5.6		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	24853925	69853925	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	39968211	83286298	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
631645	Bp121	Blood pressure QTL 121	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	17468282	62468282	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
1331784	Bp222	Blood pressure QTL 222	2.944		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	24335432	55601132	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37087983	82087983	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	40983585	85983585	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	13	47354258	94285672	Rat
2302275	Gluco37	Glucose level QTL 37	3.8		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	13	12448421	48744906	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
4145117	Mcs27	Mammary carcinoma susceptibility QTL 27		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	13	45990077	50392939	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	0.002	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	13	26244808	71244808	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	33794096	78794096	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	34834947	79834947	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
2301962	Cm72	Cardiac mass QTL 72	4.12		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	13	33794096	60914504	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	39814726	84814726	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	39968211	84968211	Rat
6893338	Cm76	Cardiac mass QTL 76	0	0.99	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	26244808	71244808	Rat
12879472	Bp399	Blood pressure QTL 399			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	47780418	50392939	Rat
11530006	Niddm72	Non-insulin dependent diabetes mellitus QTL 72		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	38286298	83286298	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
9589164	Gluco66	Glucose level QTL 66	6.67	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	17711336	62711336	Rat
7411662	Foco29	Food consumption QTL 29	20.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	13	11866254	56866254	Rat

Markers in Region

RH129486

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	9,621,420 - 9,621,604 (+)	MAPPER	mRatBN7.2
mRatBN7.2	13	45,916,257 - 45,916,441 (-)	MAPPER	mRatBN7.2
mRatBN7.2	13	45,916,257 - 45,916,441 (+)	MAPPER	mRatBN7.2
mRatBN7.2	20	9,621,420 - 9,621,604 (-)	MAPPER	mRatBN7.2
Rnor_6.0	20	10,275,097 - 10,275,280	NCBI	Rnor6.0
Rnor_6.0	13	51,297,241 - 51,297,424	NCBI	Rnor6.0
Rnor_5.0	13	56,353,905 - 56,354,088	UniSTS	Rnor5.0
Rnor_5.0	20	12,464,410 - 12,464,593	UniSTS	Rnor5.0
RGSC_v3.4	13	47,416,575 - 47,416,758	UniSTS	RGSC3.4
RGSC_v3.4	20	9,960,064 - 9,960,247	UniSTS	RGSC3.4
Celera	20	11,135,285 - 11,135,468	UniSTS
Celera	13	46,244,064 - 46,244,247	UniSTS
Cytogenetic Map	13	q13	UniSTS
Cytogenetic Map	20	p12	UniSTS

RH129888

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	45,916,291 - 45,916,488 (+)	MAPPER	mRatBN7.2
mRatBN7.2	20	9,621,393 - 9,621,570 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	51,297,275 - 51,297,471	NCBI	Rnor6.0
Rnor_5.0	13	56,353,939 - 56,354,135	UniSTS	Rnor5.0
RGSC_v3.4	13	47,416,609 - 47,416,805	UniSTS	RGSC3.4
Celera	13	46,244,098 - 46,244,294	UniSTS
Cytogenetic Map	13	q13	UniSTS
Cytogenetic Map	20	p12	UniSTS

RH137226

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	45,933,305 - 45,933,512 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	51,314,411 - 51,314,617	NCBI	Rnor6.0
Rnor_5.0	13	56,371,174 - 56,371,380	UniSTS	Rnor5.0
RGSC_v3.4	13	47,434,271 - 47,434,477	UniSTS	RGSC3.4
Celera	13	46,261,047 - 46,261,253	UniSTS
RH 3.4 Map	13	171.4	UniSTS
Cytogenetic Map	13	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001433872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_153730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC106215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ133126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC086983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ210179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000005832 ⟹ ENSRNOP00000005832

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	48,455,227 - 48,485,641 (+)	Ensembl
mRatBN7.2 Ensembl	13	45,899,928 - 45,933,643 (+)	Ensembl
Rnor_6.0 Ensembl	13	51,282,684 - 51,314,797 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119533 ⟹ ENSRNOP00000086049

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	48,455,266 - 48,484,346 (+)	Ensembl
mRatBN7.2 Ensembl	13	45,901,006 - 45,932,356 (+)	Ensembl

RefSeq Acc Id:

NM_153730 ⟹ NP_714952

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,455,265 - 48,484,335 (+)	NCBI
mRatBN7.2	13	45,903,263 - 45,932,336 (+)	NCBI
Rnor_6.0	13	51,284,245 - 51,313,441 (+)	NCBI
Rnor_5.0	13	56,337,598 - 56,371,511 (+)	NCBI
RGSC_v3.4	13	47,403,579 - 47,433,301 (+)	RGD
Celera	13	46,231,068 - 46,260,077 (+)	RGD

Sequence:

show sequence

GCGCTTGATGGGCGGCATTATGGCCCCTAAAGACATAATGACAAATACTCACGCCAAGTCCATC
CTCAACTCAATGAACTCCCTCAGGAAGAGCAATACCCTCTGTGACGTGACCTTGAGAGTGGAGC
AGAAAGACTTCCCTGCCCACCGGATTGTGCTGGCTGCCTGCAGCGATTATTTCTGTGCCATGTT
CACTAGTGAGCTTTCAGAGAAGGGGAAGCCATATGTTGACATTCAAGGTTTAACTGCTTCTACA
ATGGAAATCCTGTTGGACTTCGTGTATACAGAAACAGTACATGTGACAGTGGAGAATGTTCAAG
AACTGCTCCCTGCAGCCTGTCTTCTCCAGTTGAAAGGTGTAAAACAAGCCTGCTGTGAGTTCTT
AGAAAGTCAGTTGGATCCATCTAATTGCCTGGGTATCAGGGATTTTGCTGAAACTCACAATTGC
GTTGACCTGATGCAAGCAGCTGAGGTTTTTAGCCAGAAGCATTTTCCTGAAGTGGTACAGCACG
AAGAGTTCATTCTTCTGAGTCAAGGAGAGGTGGAGAAGCTAATCAAGTGCGATGAGATTCAGGT
GGATTCTGAAGAGCCAGTCTTTGAGGCTGTCATCAACTGGGTGAAGCATGCCAAGAAGGAGCGA
GAGGAGTCTTTGCCTGACCTCCTGCAGTATGTTCGGATGCCCCTGCTGACCCCTAGGTACATTA
CAGATGTGATTGATGCTGAGCCTTTTATCCGCTGTAGTTTACAGTGCAGGGACCTAGTTGATGA
AGCCAAGAAGTTTCACCTGAGGCCTGAACTTCGGAGTCAGATGCAAGGACCCAGGACAAGAGCC
CGACTAGGAGCCAATGAAGTGCTTCTGGTGGTTGGGGGCTTCGGAAGCCAGCAGTCTCCTATTG
ATGTGGTAGAGAAATATGACCCCAAGACACAGGAGTGGAGCTTTTTGCCAAGTATCACTCGCAA
GAGACGGTATGTGGCCTCGGTTTCCTTACATGATCGGATCTATGTGATTGGTGGCTATGATGGC
CGTTCCCGCCTCAGTTCAGTGGAGTGTCTAGACTACACAGCAGATGAAGACGGAGTGTGGTACT
CTGTGGCCCCTATGAATGTGCGGCGAGGCCTTGCTGGAGCCACCACACTGGGAGATATGATTTA
CGTTTCTGGAGGCTTTGATGGAAGCAGGCGTCATACAAGTATGGAGCGGTATGACCCAAACATT
GACCAGTGGAGTATGCTGGGAGATATGCAGACAGCTCGAGAGGGCGCGGGACTAGTGGTGGCCA
GCGGCATAATCTACTGTCTAGGAGGATATGATGGCTTGAATATATTAAATTCAGTTGAGAAATA
TGATCCCCATACAGGACACTGGACTAATGTTACGCCTATGGCCACCAAGCGTTCTGGTGCTGGA
GTAGCCCTACTGAATGACCATATTTATGTGGTGGGAGGGTTCGATGGTACAGCCCACCTTTCTT
CTGTTGAAGCTTATAACATTCGCACGGATTCCTGGACAACTGTCACAAGTATGACCACACCACG
ATGCTATGTAGGGGCCACAGTGCTTCGAGGGAGACTCTATGCAATCGCAGGATACGATGGGAAT
TCTCTGCTGAGCAGCATTGAGTGTTATGACCCTATCATCGACAGCTGGGAAGTAGTGGCCTCCA
TGGGAACCCAGCGTTGTGACGCTGGTGTGTGTGTTCTCCGAGAAAAGTAACTGTTATTTGGACA
CCAGCTGGGAACAGTTTGTGGGAGAATGAAGGATCCTTTCCAGAATGTTCACTTCTCACTGTGT
GCACAGGGCGATTACAGGCACCAGTGCTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A

hide sequence

RefSeq Acc Id:

XM_006249843 ⟹ XP_006249905

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,451,922 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,913 - 45,933,648 (+)	NCBI
Rnor_6.0	13	51,280,938 - 51,314,748 (+)	NCBI
Rnor_5.0	13	56,337,598 - 56,371,511 (+)	NCBI

Sequence:

show sequence

AGAGTTTACCACGGAGACTGCTCCGCGGCGGCTGGTCCGGGCGGCTGCGGCGGCGGCGCTCTGG
CTCCTCAGCCGCCTGCGAGCCCCGCGCCCAGCACCTCCGCTCGGGCGGCCCGGGAGCCCTGCGC
TTGATGGGCGGCATTATGGCCCCTAAAGACATAATGACAAATACTCACGCCAAGTCCATCCTCA
ACTCAATGAACTCCCTCAGGAAGAGCAATACCCTCTGTGACGTGACCTTGAGAGTGGAGCAGAA
AGACTTCCCTGCCCACCGGATTGTGCTGGCTGCCTGCAGCGATTATTTCTGTGCCATGTTCACT
AGTGAGGTAAATGCGAGTCTTTGCTATCTTTCAGAGAAGGGGAAGCCATATGTTGACATTCAAG
GTTTAACTGCTTCTACAATGGAAATCCTGTTGGACTTCGTGTATACAGAAACAGTACATGTGAC
AGTGGAGAATGTTCAAGAACTGCTCCCTGCAGCCTGTCTTCTCCAGTTGAAAGGTGTAAAACAA
GCCTGCTGTGAGTTCTTAGAAAGTCAGTTGGATCCATCTAATTGCCTGGGTATCAGGGATTTTG
CTGAAACTCACAATTGCGTTGACCTGATGCAAGCAGCTGAGGTTTTTAGCCAGAAGCATTTTCC
TGAAGTGGTACAGCACGAAGAGTTCATTCTTCTGAGTCAAGGAGAGGTGGAGAAGCTAATCAAG
TGCGATGAGATTCAGGTGGATTCTGAAGAGCCAGTCTTTGAGGCTGTCATCAACTGGGTGAAGC
ATGCCAAGAAGGAGCGAGAGGAGTCTTTGCCTGACCTCCTGCAGTATGTTCGGATGCCCCTGCT
GACCCCTAGGTACATTACAGATGTGATTGATGCTGAGCCTTTTATCCGCTGTAGTTTACAGTGC
AGGGACCTAGTTGATGAAGCCAAGAAGTTTCACCTGAGGCCTGAACTTCGGAGTCAGATGCAAG
GACCCAGGACAAGAGCCCGACTAGGAGCCAATGAAGTGCTTCTGGTGGTTGGGGGCTTCGGAAG
CCAGCAGTCTCCTATTGATGTGGTAGAGAAATATGACCCCAAGACACAGGAGTGGAGCTTTTTG
CCAAGTATCACTCGCAAGAGACGGTATGTGGCCTCGGTTTCCTTACATGATCGGATCTATGTGA
TTGGTGGCTATGATGGCCGTTCCCGCCTCAGTTCAGTGGAGTGTCTAGACTACACAGCAGATGA
AGACGGAGTGTGGTACTCTGTGGCCCCTATGAATGTGCGGCGAGGCCTTGCTGGAGCCACCACA
CTGGGAGATATGATTTACGTTTCTGGAGGCTTTGATGGAAGCAGGCGTCATACAAGTATGGAGC
GGTATGACCCAAACATTGACCAGTGGAGTATGCTGGGAGATATGCAGACAGCTCGAGAGGGCGC
GGGACTAGTGGTGGCCAGCGGCATAATCTACTGTCTAGGAGGATATGATGGCTTGAATATATTA
AATTCAGTTGAGAAATATGATCCCCATACAGGACACTGGACTAATGTTACGCCTATGGCCACCA
AGCGTTCTGGTGCTGGAGTAGCCCTACTGAATGACCATATTTATGTGGTGGGAGGGTTCGATGG
TACAGCCCACCTTTCTTCTGTTGAAGCTTATAACATTCGCACGGATTCCTGGACAACTGTCACA
AGTATGACCACACCACGATGCTATGTAGGGGCCACAGTGCTTCGAGGGAGACTCTATGCAATCG
CAGGATACGATGGGAATTCTCTGCTGAGCAGCATTGAGTGTTATGACCCTATCATCGACAGCTG
GGAAGTAGTGGCCTCCATGGGAACCCAGCGTTGTGACGCTGGTGTGTGTGTTCTCCGAGAAAAG
TAACTGTTATTTGGACACCAGCTGGGAACAGTTTGTGGGAGAATGAAGGATCCTTTCCAGAATG
TTCACTTCTCACTGTGTGCACAGGGCGATTACAGGCACCAGTGCTGTGATGATTGTACTTATTT
GACGCACATGCTCCTTCTCACTGGCCATCCTGCTCAGACGCACGGGGAACAGGTCCTCAAGGGA
AGAGAATGCACACACGGATCAGAGACACAGATCATGGCTCTCTGTGGTCTGAGGAGCACTTTCT
TCTGTTTGTAACTTACCATGTGCTTGGGAGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTATGTGTTGTGCCTCGTATATTGCAGAGAATTAAGGTGAGTATGGCCTACTAGA
TGTGGGCAGTGTCCATCCTGTGTGATTGGAAGGATATCAGTTTATATAAGCTTGGTAAAATGAA
AGTCTTTTCTCCACTCAGAAGCAAAAATATCTTTTCTAAATACAGAGGTAGCTCGAGGCACCAC
AGTTCCTTTCTGTAGGAAACCAAGAGATCACTGTCAACATTTGAGAGGCCAAGAAGGAAGATTC
GTGCTGTTCTCACTTAGGGAGACATAGTTGGCACAGAGATTTGAGTAAGTGGCAGGAGCTGAAT
GGAATGTGGGTGAACCCAGAAAATCACTGAAGTGTGAACTGGAAGGCTGGCAAGGACATATTAT
CTGACTCCATGGTCTTTCTAATGTAAAATGTTGCACCATCTTGGTTGGCACTGGAGACTGAGAG
ATTAACAGTGGAAAAGGTTAGAATAAGAAATGCTGTAAATGTGCAGAGTTCAACATACCTGTGG
TAAACTAGAAATATCTGTGATTTTACAATCATCTTAGTCCCTGCCAGGGCTCCCATAGCCGTGG
CAGTATTTGTCTTATGTGGGTGAAAAGACCATCTTCCTGGTGAATCAAGTGCTACCACGTTACT
TCGCCTCCACACTATTTATTTGGGGATGGGTGGGGTTGCTGCAGCCTAGTAGTTCAGGTACTGA
TTACTGCCCTGTTGTTTTAAGGGCGCACTTCCACTGAGGAGTGTTTAATACTGCTGTGTGGTAC
GTTCAGTTCTCTTCCTGCTATATCTTCTGTACTTGTCATTACAGTGTATTTTATTCATCCTGGA
ACAAAATAATCAAGGACAATTGAAAATCTTTTGTTAGTTTCCGCACCTCTGCCAATGTTCCCGA
GCTGCCATTCTGGCTCCTCTGTCATGGTGAATTCTGCAGTTACTGGTATAGCAAATAGGAGAGT
GTGGGAGCCGGAACTGGGCTGCACTTGCCTTTTGCTCTGGAATCCCACTTTTCCTCTCTCCCTG
AATTGTGTTTGCTGATAGAGTTAATTTCCTTTGTATTTTTTTAAGAAAACATTAAAAATGAACT
GTCTCAAATGGC

hide sequence

RefSeq Acc Id:

XM_006249844 ⟹ XP_006249906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,452,114 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,913 - 45,933,648 (+)	NCBI
Rnor_6.0	13	51,280,938 - 51,314,748 (+)	NCBI
Rnor_5.0	13	56,337,598 - 56,371,511 (+)	NCBI

Sequence:

show sequence

AGAGTTTACCACGGAGACTGCTCCGCGGCGGCTGGTCCGGGCGGCTGCGGCGGCGGCGCTCTGG
CTCCTCAGCCGCCTGCGAGCCCCGCGCCCAGCACCTCCGCTCGGGCGGCCCGGGAGCCCTGGTG
AGTGGGCGCGGCCCTGACACGCGCCCTTTCCCTTCTGCCCTCAGCCGGGGACGCGGCCTTCCCC
CAGCCCTGGTACCCCTTGGTCGGGAGGAGACGCGCTGGGGCGCTGCAGGCAGGCTTAGTGCTGC
CTTCTCAGCTTCTCCTGCGCAGCTCCCGCCTGCCCCAGAGAAGGTTTAACCTGGAAGGAAAGAA
TTCAGCCGAGAAACAGTTAAGGGGACATTTATTTAGCAGAGCTACACACTCCAAAGATTGGAGT
GGGCTTCCTCCGAAGCGCTTGATGGGCGGCATTATGGCCCCTAAAGACATAATGACAAATACTC
ACGCCAAGTCCATCCTCAACTCAATGAACTCCCTCAGGAAGAGCAATACCCTCTGTGACGTGAC
CTTGAGAGTGGAGCAGAAAGACTTCCCTGCCCACCGGATTGTGCTGGCTGCCTGCAGCGATTAT
TTCTGTGCCATGTTCACTAGTGAGGTAAATGCGAGTCTTTGCTATCTTTCAGAGAAGGGGAAGC
CATATGTTGACATTCAAGGTTTAACTGCTTCTACAATGGAAATCCTGTTGGACTTCGTGTATAC
AGAAACAGTACATGTGACAGTGGAGAATGTTCAAGAACTGCTCCCTGCAGCCTGTCTTCTCCAG
TTGAAAGGTGTAAAACAAGCCTGCTGTGAGTTCTTAGAAAGTCAGTTGGATCCATCTAATTGCC
TGGGTATCAGGGATTTTGCTGAAACTCACAATTGCGTTGACCTGATGCAAGCAGCTGAGGTTTT
TAGCCAGAAGCATTTTCCTGAAGTGGTACAGCACGAAGAGTTCATTCTTCTGAGTCAAGGAGAG
GTGGAGAAGCTAATCAAGTGCGATGAGATTCAGGTGGATTCTGAAGAGCCAGTCTTTGAGGCTG
TCATCAACTGGGTGAAGCATGCCAAGAAGGAGCGAGAGGAGTCTTTGCCTGACCTCCTGCAGTA
TGTTCGGATGCCCCTGCTGACCCCTAGGTACATTACAGATGTGATTGATGCTGAGCCTTTTATC
CGCTGTAGTTTACAGTGCAGGGACCTAGTTGATGAAGCCAAGAAGTTTCACCTGAGGCCTGAAC
TTCGGAGTCAGATGCAAGGACCCAGGACAAGAGCCCGACTAGGAGCCAATGAAGTGCTTCTGGT
GGTTGGGGGCTTCGGAAGCCAGCAGTCTCCTATTGATGTGGTAGAGAAATATGACCCCAAGACA
CAGGAGTGGAGCTTTTTGCCAAGTATCACTCGCAAGAGACGGTATGTGGCCTCGGTTTCCTTAC
ATGATCGGATCTATGTGATTGGTGGCTATGATGGCCGTTCCCGCCTCAGTTCAGTGGAGTGTCT
AGACTACACAGCAGATGAAGACGGAGTGTGGTACTCTGTGGCCCCTATGAATGTGCGGCGAGGC
CTTGCTGGAGCCACCACACTGGGAGATATGATTTACGTTTCTGGAGGCTTTGATGGAAGCAGGC
GTCATACAAGTATGGAGCGGTATGACCCAAACATTGACCAGTGGAGTATGCTGGGAGATATGCA
GACAGCTCGAGAGGGCGCGGGACTAGTGGTGGCCAGCGGCATAATCTACTGTCTAGGAGGATAT
GATGGCTTGAATATATTAAATTCAGTTGAGAAATATGATCCCCATACAGGACACTGGACTAATG
TTACGCCTATGGCCACCAAGCGTTCTGGTGCTGGAGTAGCCCTACTGAATGACCATATTTATGT
GGTGGGAGGGTTCGATGGTACAGCCCACCTTTCTTCTGTTGAAGCTTATAACATTCGCACGGAT
TCCTGGACAACTGTCACAAGTATGACCACACCACGATGCTATGTAGGGGCCACAGTGCTTCGAG
GGAGACTCTATGCAATCGCAGGATACGATGGGAATTCTCTGCTGAGCAGCATTGAGTGTTATGA
CCCTATCATCGACAGCTGGGAAGTAGTGGCCTCCATGGGAACCCAGCGTTGTGACGCTGGTGTG
TGTGTTCTCCGAGAAAAGTAACTGTTATTTGGACACCAGCTGGGAACAGTTTGTGGGAGAATGA
AGGATCCTTTCCAGAATGTTCACTTCTCACTGTGTGCACAGGGCGATTACAGGCACCAGTGCTG
TGATGATTGTACTTATTTGACGCACATGCTCCTTCTCACTGGCCATCCTGCTCAGACGCACGGG
GAACAGGTCCTCAAGGGAAGAGAATGCACACACGGATCAGAGACACAGATCATGGCTCTCTGTG
GTCTGAGGAGCACTTTCTTCTGTTTGTAACTTACCATGTGCTTGGGAGAATGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTGTGCCTCGTATATTGCAGAGAATTAAGG
TGAGTATGGCCTACTAGATGTGGGCAGTGTCCATCCTGTGTGATTGGAAGGATATCAGTTTATA
TAAGCTTGGTAAAATGAAAGTCTTTTCTCCACTCAGAAGCAAAAATATCTTTTCTAAATACAGA
GGTAGCTCGAGGCACCACAGTTCCTTTCTGTAGGAAACCAAGAGATCACTGTCAACATTTGAGA
GGCCAAGAAGGAAGATTCGTGCTGTTCTCACTTAGGGAGACATAGTTGGCACAGAGATTTGAGT
AAGTGGCAGGAGCTGAATGGAATGTGGGTGAACCCAGAAAATCACTGAAGTGTGAACTGGAAGG
CTGGCAAGGACATATTATCTGACTCCATGGTCTTTCTAATGTAAAATGTTGCACCATCTTGGTT
GGCACTGGAGACTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAAATGCTGTAAATGTGCAG
AGTTCAACATACCTGTGGTAAACTAGAAATATCTGTGATTTTACAATCATCTTAGTCCCTGCCA
GGGCTCCCATAGCCGTGGCAGTATTTGTCTTATGTGGGTGAAAAGACCATCTTCCTGGTGAATC
AAGTGCTACCACGTTACTTCGCCTCCACACTATTTATTTGGGGATGGGTGGGGTTGCTGCAGCC
TAGTAGTTCAGGTACTGATTACTGCCCTGTTGTTTTAAGGGCGCACTTCCACTGAGGAGTGTTT
AATACTGCTGTGTGGTACGTTCAGTTCTCTTCCTGCTATATCTTCTGTACTTGTCATTACAGTG
TATTTTATTCATCCTGGAACAAAATAATCAAGGACAATTGAAAATCTTTTGTTAGTTTCCGCAC
CTCTGCCAATGTTCCCGAGCTGCCATTCTGGCTCCTCTGTCATGGTGAATTCTGCAGTTACTGG
TATAGCAAATAGGAGAGTGTGGGAGCCGGAACTGGGCTGCACTTGCCTTTTGCTCTGGAATCCC
ACTTTTCCTCTCTCCCTGAATTGTGTTTGCTGATAGAGTTAATTTCCTTTGTATTTTTTTAAGA
AAACATTAAAAATGAACTGTCTCAAATGGC

hide sequence

RefSeq Acc Id:

XM_006249845 ⟹ XP_006249907

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,451,985 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,914 - 45,933,648 (+)	NCBI
Rnor_6.0	13	51,280,933 - 51,314,748 (+)	NCBI
Rnor_5.0	13	56,337,598 - 56,371,511 (+)	NCBI

Sequence:

show sequence

AGCCTAGAGTTTACCACGGAGACTGCTCCGCGGCGGCTGGTCCGGGCGGCTGCGGCGGCGGCGC
TCTGGCTCCTCAGCCGCCTGCGAGCCCCGCGCCCAGCACCTCCGCTCGGGCGGCCCGGGAGCCC
TGCGCTTGATGGGCGGCATTATGGCCCCTAAAGACATAATGACAAATACTCACGCCAAGTCCAT
CCTCAACTCAATGAACTCCCTCAGGAAGAGCAATACCCTCTGTGACGTGACCTTGAGAGTGGAG
CAGAAAGACTTCCCTGCCCACCGGATTGTGCTGGCTGCCTGCAGCGATTATTTCTGTGCCATGT
TCACTAGTGAGCTTTCAGAGAAGGGGAAGCCATATGTTGACATTCAAGGTTTAACTGCTTCTAC
AATGGAAATCCTGTTGGACTTCGTGTATACAGAAACAGTACATGTGACAGTGGAGAATGTTCAA
GAACTGCTCCCTGCAGCCTGTCTTCTCCAGTTGAAAGGTGTAAAACAAGCCTGCTGTGAGTTCT
TAGAAAGTCAGTTGGATCCATCTAATTGCCTGGGTATCAGGGATTTTGCTGAAACTCACAATTG
CGTTGACCTGATGCAAGCAGCTGAGGTTTTTAGCCAGAAGCATTTTCCTGAAGTGGTACAGCAC
GAAGAGTTCATTCTTCTGAGTCAAGGAGAGGTGGAGAAGCTAATCAAGTGCGATGAGATTCAGG
TGGATTCTGAAGAGCCAGTCTTTGAGGCTGTCATCAACTGGGTGAAGCATGCCAAGAAGGAGCG
AGAGGAGTCTTTGCCTGACCTCCTGCAGTATGTTCGGATGCCCCTGCTGACCCCTAGGTACATT
ACAGATGTGATTGATGCTGAGCCTTTTATCCGCTGTAGTTTACAGTGCAGGGACCTAGTTGATG
AAGCCAAGAAGTTTCACCTGAGGCCTGAACTTCGGAGTCAGATGCAAGGACCCAGGACAAGAGC
CCGACTAGGAGCCAATGAAGTGCTTCTGGTGGTTGGGGGCTTCGGAAGCCAGCAGTCTCCTATT
GATGTGGTAGAGAAATATGACCCCAAGACACAGGAGTGGAGCTTTTTGCCAAGTATCACTCGCA
AGAGACGGTATGTGGCCTCGGTTTCCTTACATGATCGGATCTATGTGATTGGTGGCTATGATGG
CCGTTCCCGCCTCAGTTCAGTGGAGTGTCTAGACTACACAGCAGATGAAGACGGAGTGTGGTAC
TCTGTGGCCCCTATGAATGTGCGGCGAGGCCTTGCTGGAGCCACCACACTGGGAGATATGATTT
ACGTTTCTGGAGGCTTTGATGGAAGCAGGCGTCATACAAGTATGGAGCGGTATGACCCAAACAT
TGACCAGTGGAGTATGCTGGGAGATATGCAGACAGCTCGAGAGGGCGCGGGACTAGTGGTGGCC
AGCGGCATAATCTACTGTCTAGGAGGATATGATGGCTTGAATATATTAAATTCAGTTGAGAAAT
ATGATCCCCATACAGGACACTGGACTAATGTTACGCCTATGGCCACCAAGCGTTCTGGTGCTGG
AGTAGCCCTACTGAATGACCATATTTATGTGGTGGGAGGGTTCGATGGTACAGCCCACCTTTCT
TCTGTTGAAGCTTATAACATTCGCACGGATTCCTGGACAACTGTCACAAGTATGACCACACCAC
GATGCTATGTAGGGGCCACAGTGCTTCGAGGGAGACTCTATGCAATCGCAGGATACGATGGGAA
TTCTCTGCTGAGCAGCATTGAGTGTTATGACCCTATCATCGACAGCTGGGAAGTAGTGGCCTCC
ATGGGAACCCAGCGTTGTGACGCTGGTGTGTGTGTTCTCCGAGAAAAGTAACTGTTATTTGGAC
ACCAGCTGGGAACAGTTTGTGGGAGAATGAAGGATCCTTTCCAGAATGTTCACTTCTCACTGTG
TGCACAGGGCGATTACAGGCACCAGTGCTGTGATGATTGTACTTATTTGACGCACATGCTCCTT
CTCACTGGCCATCCTGCTCAGACGCACGGGGAACAGGTCCTCAAGGGAAGAGAATGCACACACG
GATCAGAGACACAGATCATGGCTCTCTGTGGTCTGAGGAGCACTTTCTTCTGTTTGTAACTTAC
CATGTGCTTGGGAGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG
TTGTGCCTCGTATATTGCAGAGAATTAAGGTGAGTATGGCCTACTAGATGTGGGCAGTGTCCAT
CCTGTGTGATTGGAAGGATATCAGTTTATATAAGCTTGGTAAAATGAAAGTCTTTTCTCCACTC
AGAAGCAAAAATATCTTTTCTAAATACAGAGGTAGCTCGAGGCACCACAGTTCCTTTCTGTAGG
AAACCAAGAGATCACTGTCAACATTTGAGAGGCCAAGAAGGAAGATTCGTGCTGTTCTCACTTA
GGGAGACATAGTTGGCACAGAGATTTGAGTAAGTGGCAGGAGCTGAATGGAATGTGGGTGAACC
CAGAAAATCACTGAAGTGTGAACTGGAAGGCTGGCAAGGACATATTATCTGACTCCATGGTCTT
TCTAATGTAAAATGTTGCACCATCTTGGTTGGCACTGGAGACTGAGAGATTAACAGTGGAAAAG
GTTAGAATAAGAAATGCTGTAAATGTGCAGAGTTCAACATACCTGTGGTAAACTAGAAATATCT
GTGATTTTACAATCATCTTAGTCCCTGCCAGGGCTCCCATAGCCGTGGCAGTATTTGTCTTATG
TGGGTGAAAAGACCATCTTCCTGGTGAATCAAGTGCTACCACGTTACTTCGCCTCCACACTATT
TATTTGGGGATGGGTGGGGTTGCTGCAGCCTAGTAGTTCAGGTACTGATTACTGCCCTGTTGTT
TTAAGGGCGCACTTCCACTGAGGAGTGTTTAATACTGCTGTGTGGTACGTTCAGTTCTCTTCCT
GCTATATCTTCTGTACTTGTCATTACAGTGTATTTTATTCATCCTGGAACAAAATAATCAAGGA
CAATTGAAAATCTTTTGTTAGTTTCCGCACCTCTGCCAATGTTCCCGAGCTGCCATTCTGGCTC
CTCTGTCATGGTGAATTCTGCAGTTACTGGTATAGCAAATAGGAGAGTGTGGGAGCCGGAACTG
GGCTGCACTTGCCTTTTGCTCTGGAATCCCACTTTTCCTCTCTCCCTGAATTGTGTTTGCTGAT
AGAGTTAATTTCCTTTGTATTTTTTTAAGAAAACATTAAAAATGAACTGTCTCAAATGGC

hide sequence

RefSeq Acc Id:

XM_008769540 ⟹ XP_008767762

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,452,119 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,915 - 45,933,648 (+)	NCBI
Rnor_6.0	13	51,280,941 - 51,314,748 (+)	NCBI

Sequence:

show sequence

GTTTACCACGGAGACTGCTCCGCGGCGGCTGGTCCGGGCGGCTGCGGCGGCGGCGCTCTGGCTC
CTCAGCCGCCTGCGAGCCCCGCGCCCAGCACCTCCGCTCGGGCGGCCCGGGAGCCCTGGTGAGT
GGGCGCGGCCCTGACACGCGCCCTTTCCCTTCTGCCCTCAGCCGGGGACGCGGCCTTCCCCCAG
CCCTGGTACCCCTTGGTCGGGAGGAGACGCGCTGGGGCGCTGCAGGCAGGCTTAGTGCTGCCTT
CTCAGCTTCTCCTGCGCAGCTCCCGCCTGCCCCAGAGAAGGTTTAACCTGGAAGGAAAGAATTC
AGCCGAGAAACAGTTAAGGGGACATTTATTTAGCAGAGCTACACACTCCAAAGATTGGAGTGGG
CTTCCTCCGAAGCGCTTGATGGGCGGCATTATGGCCCCTAAAGACATAATGACAAATACTCACG
CCAAGTCCATCCTCAACTCAATGAACTCCCTCAGGAAGAGCAATACCCTCTGTGACGTGACCTT
GAGAGTGGAGCAGAAAGACTTCCCTGCCCACCGGATTGTGCTGGCTGCCTGCAGCGATTATTTC
TGTGCCATGTTCACTAGTGAGATGAAAGGTCTCAACAAATGCCTTGCCAAGGTCACATTGCTTA
GAGCACCACAGAGAGCAAATGCCTGTAATGCCAGCCCTCAGAAGTCTGGGTGAGAGGATGGCTA
TAAATTCAAGGACAGCTTGGGCTACAACCTGGAAACCAGGTCAGCCACATAGCATAATCAGCTT
TCAGAGAAGGGGAAGCCATATGTTGACATTCAAGGTTTAACTGCTTCTACAATGGAAATCCTGT
TGGACTTCGTGTATACAGAAACAGTACATGTGACAGTGGAGAATGTTCAAGAACTGCTCCCTGC
AGCCTGTCTTCTCCAGTTGAAAGGTGTAAAACAAGCCTGCTGTGAGTTCTTAGAAAGTCAGTTG
GATCCATCTAATTGCCTGGGTATCAGGGATTTTGCTGAAACTCACAATTGCGTTGACCTGATGC
AAGCAGCTGAGGTTTTTAGCCAGAAGCATTTTCCTGAAGTGGTACAGCACGAAGAGTTCATTCT
TCTGAGTCAAGGAGAGGTGGAGAAGCTAATCAAGTGCGATGAGATTCAGGTGGATTCTGAAGAG
CCAGTCTTTGAGGCTGTCATCAACTGGGTGAAGCATGCCAAGAAGGAGCGAGAGGAGTCTTTGC
CTGACCTCCTGCAGTATGTTCGGATGCCCCTGCTGACCCCTAGGTACATTACAGATGTGATTGA
TGCTGAGCCTTTTATCCGCTGTAGTTTACAGTGCAGGGACCTAGTTGATGAAGCCAAGAAGTTT
CACCTGAGGCCTGAACTTCGGAGTCAGATGCAAGGACCCAGGACAAGAGCCCGACTAGGAGCCA
ATGAAGTGCTTCTGGTGGTTGGGGGCTTCGGAAGCCAGCAGTCTCCTATTGATGTGGTAGAGAA
ATATGACCCCAAGACACAGGAGTGGAGCTTTTTGCCAAGTATCACTCGCAAGAGACGGTATGTG
GCCTCGGTTTCCTTACATGATCGGATCTATGTGATTGGTGGCTATGATGGCCGTTCCCGCCTCA
GTTCAGTGGAGTGTCTAGACTACACAGCAGATGAAGACGGAGTGTGGTACTCTGTGGCCCCTAT
GAATGTGCGGCGAGGCCTTGCTGGAGCCACCACACTGGGAGATATGATTTACGTTTCTGGAGGC
TTTGATGGAAGCAGGCGTCATACAAGTATGGAGCGGTATGACCCAAACATTGACCAGTGGAGTA
TGCTGGGAGATATGCAGACAGCTCGAGAGGGCGCGGGACTAGTGGTGGCCAGCGGCATAATCTA
CTGTCTAGGAGGATATGATGGCTTGAATATATTAAATTCAGTTGAGAAATATGATCCCCATACA
GGACACTGGACTAATGTTACGCCTATGGCCACCAAGCGTTCTGGTGCTGGAGTAGCCCTACTGA
ATGACCATATTTATGTGGTGGGAGGGTTCGATGGTACAGCCCACCTTTCTTCTGTTGAAGCTTA
TAACATTCGCACGGATTCCTGGACAACTGTCACAAGTATGACCACACCACGATGCTATGTAGGG
GCCACAGTGCTTCGAGGGAGACTCTATGCAATCGCAGGATACGATGGGAATTCTCTGCTGAGCA
GCATTGAGTGTTATGACCCTATCATCGACAGCTGGGAAGTAGTGGCCTCCATGGGAACCCAGCG
TTGTGACGCTGGTGTGTGTGTTCTCCGAGAAAAGTAACTGTTATTTGGACACCAGCTGGGAACA
GTTTGTGGGAGAATGAAGGATCCTTTCCAGAATGTTCACTTCTCACTGTGTGCACAGGGCGATT
ACAGGCACCAGTGCTGTGATGATTGTACTTATTTGACGCACATGCTCCTTCTCACTGGCCATCC
TGCTCAGACGCACGGGGAACAGGTCCTCAAGGGAAGAGAATGCACACACGGATCAGAGACACAG
ATCATGGCTCTCTGTGGTCTGAGGAGCACTTTCTTCTGTTTGTAACTTACCATGTGCTTGGGAG
AATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTGTGCCTCGTATA
TTGCAGAGAATTAAGGTGAGTATGGCCTACTAGATGTGGGCAGTGTCCATCCTGTGTGATTGGA
AGGATATCAGTTTATATAAGCTTGGTAAAATGAAAGTCTTTTCTCCACTCAGAAGCAAAAATAT
CTTTTCTAAATACAGAGGTAGCTCGAGGCACCACAGTTCCTTTCTGTAGGAAACCAAGAGATCA
CTGTCAACATTTGAGAGGCCAAGAAGGAAGATTCGTGCTGTTCTCACTTAGGGAGACATAGTTG
GCACAGAGATTTGAGTAAGTGGCAGGAGCTGAATGGAATGTGGGTGAACCCAGAAAATCACTGA
AGTGTGAACTGGAAGGCTGGCAAGGACATATTATCTGACTCCATGGTCTTTCTAATGTAAAATG
TTGCACCATCTTGGTTGGCACTGGAGACTGAGAGATTAACAGTGGAAAAGGTTAGAATAAGAAA
TGCTGTAAATGTGCAGAGTTCAACATACCTGTGGTAAACTAGAAATATCTGTGATTTTACAATC
ATCTTAGTCCCTGCCAGGGCTCCCATAGCCGTGGCAGTATTTGTCTTATGTGGGTGAAAAGACC
ATCTTCCTGGTGAATCAAGTGCTACCACGTTACTTCGCCTCCACACTATTTATTTGGGGATGGG
TGGGGTTGCTGCAGCCTAGTAGTTCAGGTACTGATTACTGCCCTGTTGTTTTAAGGGCGCACTT
CCACTGAGGAGTGTTTAATACTGCTGTGTGGTACGTTCAGTTCTCTTCCTGCTATATCTTCTGT
ACTTGTCATTACAGTGTATTTTATTCATCCTGGAACAAAATAATCAAGGACAATTGAAAATCTT
TTGTTAGTTTCCGCACCTCTGCCAATGTTCCCGAGCTGCCATTCTGGCTCCTCTGTCATGGTGA
ATTCTGCAGTTACTGGTATAGCAAATAGGAGAGTGTGGGAGCCGGAACTGGGCTGCACTTGCCT
TTTGCTCTGGAATCCCACTTTTCCTCTCTCCCTGAATTGTGTTTGCTGATAGAGTTAATTTCCT
TTGTATTTTTTTAAGAAAACATTAAAAATGAACTGTCTCAAATGGC

hide sequence

RefSeq Acc Id:

XM_039090401 ⟹ XP_038946329

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,451,920 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,913 - 45,933,648 (+)	NCBI

RefSeq Acc Id:

XM_039090402 ⟹ XP_038946330

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,451,922 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,914 - 45,933,648 (+)	NCBI

RefSeq Acc Id:

XM_039090404 ⟹ XP_038946332

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,451,926 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,913 - 45,933,648 (+)	NCBI

RefSeq Acc Id:

XM_039090405 ⟹ XP_038946333

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,452,119 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,915 - 45,933,648 (+)	NCBI

RefSeq Acc Id:

XM_039090406 ⟹ XP_038946334

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,452,119 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,915 - 45,933,648 (+)	NCBI

RefSeq Acc Id:

XM_039090407 ⟹ XP_038946335

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,452,119 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,915 - 45,933,648 (+)	NCBI

RefSeq Acc Id:

XM_039090408 ⟹ XP_038946336

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,451,923 - 48,485,638 (+)	NCBI
mRatBN7.2	13	45,899,913 - 45,933,648 (+)	NCBI

RefSeq Acc Id:

XM_063272056 ⟹ XP_063128126

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,451,929 - 48,485,638 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001420801	(Get FASTA)	NCBI Sequence Viewer
	NP_001420802	(Get FASTA)	NCBI Sequence Viewer
	NP_714952	(Get FASTA)	NCBI Sequence Viewer
	XP_006249905	(Get FASTA)	NCBI Sequence Viewer
	XP_006249906	(Get FASTA)	NCBI Sequence Viewer
	XP_006249907	(Get FASTA)	NCBI Sequence Viewer
	XP_008767762	(Get FASTA)	NCBI Sequence Viewer
	XP_038946329	(Get FASTA)	NCBI Sequence Viewer
	XP_038946330	(Get FASTA)	NCBI Sequence Viewer
	XP_038946332	(Get FASTA)	NCBI Sequence Viewer
	XP_038946333	(Get FASTA)	NCBI Sequence Viewer
	XP_038946334	(Get FASTA)	NCBI Sequence Viewer
	XP_038946335	(Get FASTA)	NCBI Sequence Viewer
	XP_038946336	(Get FASTA)	NCBI Sequence Viewer
	XP_063128126	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH86983	(Get FASTA)	NCBI Sequence Viewer
	CAC79640	(Get FASTA)	NCBI Sequence Viewer
	EDM09724	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000005832
	ENSRNOP00000086049
GenBank Protein	Q8R2H4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_714952 ⟸ NM_153730

- UniProtKB:

A6ICC3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGGIMAPKDIMTNTHAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTS
ELSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLES
QLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKCDEIQVDS
EEPVFEAVINWVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAK
KFHLRPELRSQMQGPRTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRR
YVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVS
GGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYCLGGYDGLNILNSVEKYDP
HTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY
VGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVASMGTQRCDAGVCVLREK

hide sequence

RefSeq Acc Id:

XP_006249907 ⟸ XM_006249845

- Peptide Label:

isoform X4

- Sequence:

show sequence

MGGIMAPKDIMTNTHAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTS
ELSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLES
QLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKCDEIQVDS
EEPVFEAVINWVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAK
KFHLRPELRSQMQGPRTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRR
YVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVS
GGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYCLGGYDGLNILNSVEKYDP
HTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY
VGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVASMGTQRCDAGVCVLREK

hide sequence

RefSeq Acc Id:	XP_006249906 ⟸ XM_006249844
- Peptide Label:	isoform X3
- UniProtKB:	A0A140TA97 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGGIMAPKDIMTNTHAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTS EVNASLCYLSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQA CCEFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKC DEIQVDSEEPVFEAVINWVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCR DLVDEAKKFHLRPELRSQMQGPRTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYCLGGYDGLNILN SVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVASMGTQRCDAGVCVLREK hide sequence

RefSeq Acc Id:	XP_006249905 ⟸ XM_006249843
- Peptide Label:	isoform X3
- UniProtKB:	A0A140TA97 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGGIMAPKDIMTNTHAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTS EVNASLCYLSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQA CCEFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKC DEIQVDSEEPVFEAVINWVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCR DLVDEAKKFHLRPELRSQMQGPRTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYCLGGYDGLNILN SVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVASMGTQRCDAGVCVLREK hide sequence

RefSeq Acc Id:

XP_008767762 ⟸ XM_008769540

- Peptide Label:

isoform X5

- Sequence:

show sequence

MEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLGIRDFAETHNC
VDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKCDEIQVDSEEPVFEAVINWVKHAKKER
EESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAKKFHLRPELRSQMQGPRTRA
RLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDG
RSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNI
DQWSMLGDMQTAREGAGLVVASGIIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAG
VALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGN
SLLSSIECYDPIIDSWEVVASMGTQRCDAGVCVLREK

hide sequence

Ensembl Acc Id:

ENSRNOP00000005832 ⟸ ENSRNOT00000005832

RefSeq Acc Id:	XP_038946329 ⟸ XM_039090401
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038946336 ⟸ XM_039090408
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038946332 ⟸ XM_039090404
- Peptide Label:	isoform X3
- UniProtKB:	A0A140TA97 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038946330 ⟸ XM_039090402
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A1G7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038946333 ⟸ XM_039090405
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038946334 ⟸ XM_039090406
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038946335 ⟸ XM_039090407
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000086049 ⟸ ENSRNOT00000119533

RefSeq Acc Id:	XP_063128126 ⟸ XM_063272056
- Peptide Label:	isoform X4
- UniProtKB:	A6ICC3 (UniProtKB/TrEMBL)

Protein Domains

BACK BTB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8R2H4-F1-model_v2	AlphaFold	Q8R2H4	1-568	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628717	AgrOrtholog
BioCyc Gene	G2FUF-18230	BioCyc
Ensembl Genes	ENSRNOG00000004193	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000005832	ENTREZGENE
	ENSRNOT00000119533	ENTREZGENE
Gene3D-CATH	1.25.40.420	UniProtKB/Swiss-Prot
	2.120.10.80	UniProtKB/Swiss-Prot
	Potassium Channel Kv1.1, Chain A	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7133597	IMAGE-MGC_LOAD
InterPro	BACK	UniProtKB/Swiss-Prot
	BTB-kelch_protein	UniProtKB/Swiss-Prot
	BTB/POZ_dom	UniProtKB/Swiss-Prot
	Kelch-typ_b-propeller	UniProtKB/Swiss-Prot
	Kelch_1	UniProtKB/Swiss-Prot
	SKP1/BTB/POZ_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:266772	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93127	IMAGE-MGC_LOAD
NCBI Gene	266772	ENTREZGENE
PANTHER	KELCH PROTEIN	UniProtKB/Swiss-Prot
	KELCH-LIKE PROTEIN 12	UniProtKB/Swiss-Prot
Pfam	BACK	UniProtKB/Swiss-Prot
	BTB	UniProtKB/Swiss-Prot
	Kelch_1	UniProtKB/Swiss-Prot
	Kelch_KLHDC2_KLHL20_DRC7	UniProtKB/Swiss-Prot
PhenoGen	Klhl12	PhenoGen
PIRSF	Kelch-like_protein_gigaxonin	UniProtKB/Swiss-Prot
PRINTS	KELCHREPEAT	UniProtKB/Swiss-Prot
PROSITE	BTB	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000004193	RatGTEx
SMART	BACK	UniProtKB/Swiss-Prot
	BTB	UniProtKB/Swiss-Prot
	Kelch	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF117281	UniProtKB/Swiss-Prot
	SSF54695	UniProtKB/Swiss-Prot
UniProt	A0A140TA97	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A1G7	ENTREZGENE, UniProtKB/TrEMBL
	A6ICC3	ENTREZGENE, UniProtKB/TrEMBL
	KLH12_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	F8WG02	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-02-06	Klhl12	kelch-like family member 12	Klhl12	kelch-like 12 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Klhl12	kelch-like 12 (Drosophila)	C3ip1	kelch-like protein C3IP1	Symbol and Name updated	1299863	APPROVED
2004-02-26	C3ip1	kelch-like protein C3IP1			Symbol and Name status set to approved	625702	APPROVED
2003-02-27	C3ip1	kelch-like protein C3IP1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)