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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of mRNA splicing, via spliceosome
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Accession:GO:0048026 term browser browse the term
Definition:Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
Synonyms:exact_synonym: positive regulation of nuclear mRNA splicing, via spliceosome;   up regulation of nuclear mRNA splicing, via spliceosome;   upregulation of nuclear mRNA splicing, via spliceosome
 narrow_synonym: activation of nuclear mRNA splicing via U2-type spliceosome;   activation of nuclear mRNA splicing, via spliceosome;   positive regulation of nuclear mRNA splicing via U2-type spliceosome;   stimulation of nuclear mRNA splicing via U2-type spliceosome;   stimulation of nuclear mRNA splicing, via spliceosome;   up regulation of nuclear mRNA splicing via U2-type spliceosome;   upregulation of nuclear mRNA splicing via U2-type spliceosome
 broad_synonym: positive regulation of pre-mRNA splicing
 alt_id: GO:0035057


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positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF3 CUGBP Elav-like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:127,060,330...127,075,106
Ensembl chr 1:130,701,452...130,718,578 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:30,495,149...30,818,358
Ensembl chr18:34,068,123...34,374,372 		JBrowse link
G DAZAP1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 Ensembl chr19:1,391,764...1,408,254 JBrowse link
G HMX2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr10:119,700,416...119,708,444 JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G LMNTD2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr11:559,779...564,584
Ensembl chr11:588,816...594,794 		JBrowse link
G LOC100988043 eukaryotic initiation factor 4A-III acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chr17:74,221,793...74,233,738 JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:68,724,176...68,764,423
Ensembl chr 9:96,845,422...96,885,624 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,553,379...3,669,367
Ensembl chr11:3,661,568...3,767,443 		JBrowse link
G OBI1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr13:59,840,406...59,884,765
Ensembl chr13:78,874,466...78,918,446 		JBrowse link
G PRDX6 peroxiredoxin 6 involved_in ISO (PMID:16186110) UniProt PMID:16186110 NCBI chr 1:148,988,836...149,000,345 JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480465) Ensembl
MGI		 PMID:18480465 GO_REF:0000107 NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828 		JBrowse link
G RBMXL1 RBMX like 1 involved_in ISO PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr 1:91,695,452...91,708,711 JBrowse link
G SF3B4 splicing factor 3b subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:125,268,113...125,273,405
Ensembl chr 1:128,924,317...128,929,610 		JBrowse link
G SLC39A5 solute carrier family 39 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr12:32,677,330...32,685,316
Ensembl chr12:32,929,033...32,936,158 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr19:46,094,679...46,118,022
Ensembl chr19:55,021,402...55,046,281 		JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:12840015) UniProt PMID:12840015 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315 		JBrowse link
G STH saitohin involved_in ISO (PMID:16186110) UniProt PMID:16186110 NCBI chr17:11,475,944...11,479,303 JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355 		JBrowse link
G TRA2A transformer 2 alpha homolog acts_upstream_of_or_within ISO (PMID:22194695) MGI PMID:22194695 NCBI chr 7:24,184,844...24,213,889
Ensembl chr 7:23,791,479...23,820,124 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22194695) Ensembl
MGI		 PMID:22194695 GO_REF:0000107 NCBI chr 3:182,942,623...182,963,938
Ensembl chr 3:191,414,777...191,436,103 		JBrowse link
G ZFP64 ZFP64 zinc finger protein acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr20:48,430,392...48,535,618
Ensembl chr20:49,516,786...49,653,435 		JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chr17:15,622,030...15,624,812
Ensembl chr17:15,843,190...15,846,044 		JBrowse link
G EXOSC10 exosome component 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224 		JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr13:95,349,449...95,373,984
Ensembl chr13:114,415,784...114,438,692 		JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chr  X:108,897,140...108,916,620
Ensembl chr  X:119,292,231...119,311,632 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16641
    regulation of biological process 11253
      regulation of cellular process 10896
        regulation of metabolic process 6440
          regulation of primary metabolic process 5327
            regulation of RNA splicing 155
              regulation of mRNA splicing, via spliceosome 108
                positive regulation of mRNA splicing, via spliceosome 27
                  positive regulation of mRNA cis splicing, via spliceosome 5
Path 2
Term Annotations click to browse term
  biological_process 16641
    cellular process 16198
      metabolic process 10768
        primary metabolic process 9464
          nucleobase-containing compound metabolic process 5307
            nucleic acid metabolic process 4794
              RNA metabolic process 4264
                RNA biosynthetic process 4072
                  RNA processing 847
                    RNA splicing 370
                      RNA splicing, via transesterification reactions 283
                        RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 283
                          mRNA splicing, via spliceosome 283
                            regulation of mRNA splicing, via spliceosome 108
                              positive regulation of mRNA splicing, via spliceosome 27
                                positive regulation of mRNA cis splicing, via spliceosome 5
paths to the root