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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of RNA splicing
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Accession:GO:0043484 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.



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regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07051190.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AC141959.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Aff2 AF4/FMR2 family, member 2 involved_in IBA
ISO
PMID:21873635
(MGI:4430801|PMID:19136466)
(PMID:19136466)
RGD PMID:19136466 PMID:21873635 MGI:4430801, RGD:13792537 NCBI chr  X:147,928,130...148,432,484
Ensembl chr  X:147,928,407...148,429,995
JBrowse link
G Ahnak AHNAK nucleoprotein involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5545966|PMID:21940993)
PMID:21873635
UniProt
RGD
PMID:21940993 PMID:21873635 GO_REF:0000024 MGI:5545966, RGD:13792537 NCBI chr 1:205,882,223...205,970,934
Ensembl chr 1:205,882,273...205,970,926
JBrowse link
G Akap17a A-kinase anchoring protein 17A involved_in IBA
ISO
PMID:21873635
(PMID:19840947)
RGD PMID:19840947 PMID:21873635 RGD:13792537 NCBI chr12:16,310,427...16,315,166
Ensembl chr12:16,310,437...16,314,479
JBrowse link
G Brdt bromodomain testis associated involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5448498|PMID:22570411)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22570411 GO_REF:0000024 GO_REF:0000107 MGI:5448498 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
G Ccnl1 cyclin L1 involved_in ISO
IEA
(PMID:12501247)
GO_REF:0000107
RGD
Ensembl
PMID:12501247 GO_REF:0000107 NCBI chr 2:150,184,865...150,199,524
Ensembl chr 2:150,184,798...150,197,368
JBrowse link
G Ccnl2 cyclin L2 involved_in ISO (PMID:18216018) RGD PMID:18216018 NCBI chr 5:166,416,940...166,428,997 JBrowse link
G Cdk12 cyclin-dependent kinase 12 IDA RGD PMID:16537916 RGD:8553775 NCBI chr10:83,201,177...83,256,906
Ensembl chr10:83,201,211...83,280,888
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in ISO
ISS
(PMID:16946708)
GO_REF:0000024
RGD
UniProt
PMID:16946708 GO_REF:0000024 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Clk1 CDC-like kinase 1 involved_in ISO (PMID:19168442) RGD PMID:19168442 NCBI chr 9:59,947,774...59,959,002
Ensembl chr 9:59,947,764...59,957,000
JBrowse link
G Clk2 CDC-like kinase 2 involved_in ISO (PMID:9637771) RGD PMID:9637771 NCBI chr 2:174,570,614...174,582,645 JBrowse link
G Clk3 CDC-like kinase 3 involved_in ISO
ISS
(PMID:9637771)
GO_REF:0000024
RGD
UniProt
PMID:9637771 GO_REF:0000024 NCBI chr 8:58,152,155...58,167,196
Ensembl chr 8:58,152,155...58,168,181
JBrowse link
G Clk4 CDC-like kinase 4 involved_in ISO (PMID:19168442) RGD PMID:19168442 NCBI chr10:35,523,382...35,541,387
Ensembl chr10:35,524,755...35,541,352
JBrowse link
G Cpne1 copine 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,587,548...144,629,603
Ensembl chr 3:144,588,995...144,598,636
JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 involved_in IBA
ISO
ISS
IEA
PMID:21873635
(MGI:5915403|PMID:29107558)
GO_REF:0000024
(PMID:19285943)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19285943 PMID:29107558 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5915403, RGD:13792537 NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:19285943)
UniProt
Ensembl
RGD
PMID:19285943 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr19:34,034,559...34,041,726
Ensembl chr19:34,034,559...34,041,726
JBrowse link
G Fam50a family with sequence similarity 50, member A involved_in ISO (PMID:32703943) RGD PMID:32703943 NCBI chr  X:152,095,245...152,102,362
Ensembl chr  X:152,095,245...152,102,362
JBrowse link
G Fastk Fas-activated serine/threonine kinase involved_in ISO (PMID:17135269), (PMID:17592127) RGD PMID:17135269 PMID:17592127 NCBI chr 4:10,732,273...10,736,332
Ensembl chr 4:10,732,256...10,737,430
JBrowse link
G Fblim1 filamin binding LIM protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,883,946...153,915,524
Ensembl chr 5:153,883,960...153,913,757
JBrowse link
G Fus FUS RNA binding protein involved_in ISO (PMID:25453086), (PMID:27731383) RGD PMID:25453086 PMID:27731383 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414
JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:19,412,944...19,429,364
Ensembl chr14:19,412,156...19,429,362
JBrowse link
G Hnrnpf heterogeneous nuclear ribonucleoprotein F involved_in ISO
IBA
ISS
(PMID:20526337), (PMID:9111328)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:9111328 PMID:20526337 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:151,083,262...151,104,464
Ensembl chr 4:151,083,062...151,109,038
JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 involved_in ISO
IEA
IBA
ISS
(PMID:16946708)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16946708 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr10:34,692,868...34,702,849
Ensembl chr10:34,693,555...34,702,846
JBrowse link
G Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:97,780,890...97,786,846
Ensembl chr  X:97,780,785...97,787,041
JBrowse link
G Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:25,616,400...25,625,814
Ensembl chr20:25,614,733...25,625,750
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:14,969,953...15,000,574
Ensembl chr 6:14,970,057...14,999,745
JBrowse link
G Ildr1 immunoglobulin-like domain containing receptor 1 acts_upstream_of_or_within ISO (PMID:28785060) RGD PMID:28785060 NCBI chr11:64,085,774...64,118,760
Ensembl chr11:64,008,566...64,118,760
JBrowse link
G Ildr2 immunoglobulin-like domain containing receptor 2 acts_upstream_of_or_within ISO (PMID:28785060) RGD PMID:28785060 NCBI chr13:78,518,770...78,580,627
Ensembl chr13:78,518,802...78,576,924
JBrowse link
G LOC103690302 AF4/FMR2 family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC679087 similar to swan involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:25,589,460...25,597,875 JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in ISO (PMID:15257297), (PMID:16946708) RGD PMID:15257297 PMID:16946708 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 involved_in ISO (PMID:15257297), (PMID:16946708) RGD PMID:15257297 PMID:16946708 NCBI chr15:97,385,238...97,542,924
Ensembl chr15:97,385,244...97,542,937
JBrowse link
G Mbnl3 muscleblind-like splicing regulator 3 involved_in ISO (PMID:15257297) RGD PMID:15257297 NCBI chr  X:130,641,942...130,737,179
Ensembl chr  X:130,648,538...130,737,056
JBrowse link
G Mettl4 methyltransferase like 4 involved_in ISO (PMID:31913360) RGD PMID:31913360 NCBI chr 9:111,440,976...111,523,871
Ensembl chr 9:111,441,027...111,464,749
JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO
IEA
(PMID:10672515)
GO_REF:0000107
RGD
Ensembl
PMID:10672515 GO_REF:0000107 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:23512658)
Ensembl
RGD
PMID:23512658 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Prx periaxin involved_in IBA
ISO
PMID:21873635
(MGI:5545966|PMID:21940993)
RGD PMID:21940993 PMID:21873635 MGI:5545966, RGD:13792537 NCBI chr 1:82,785,082...82,807,154
Ensembl chr 1:82,786,815...82,807,407
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:74,313,536...74,399,439
Ensembl chr 5:74,315,101...74,399,791
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
JBrowse link
G Rbm12 RNA binding motif protein 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,587,548...144,629,950
Ensembl chr 3:144,611,623...144,629,915
JBrowse link
G Rbm12b RNA binding motif protein 12B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:25,597,405...25,610,324
Ensembl chr 5:25,590,493...25,611,245
JBrowse link
G Rbm17 RNA binding motif protein 17 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014
JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:19285943) RGD PMID:19285943 NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO (MGI:5919306|PMID:23604122) RGD PMID:23604122 MGI:5919306 NCBI chr20:10,123,111...10,148,704
Ensembl chr20:10,123,125...10,147,928
JBrowse link
G Smptb polypyrimidine tract-binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:16,609,016...16,610,898
Ensembl chr  X:16,599,038...16,600,920
Ensembl chr  X:16,599,038...16,600,920
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 involved_in ISO
ISS
(PMID:2467746)
GO_REF:0000024
RGD
UniProt
PMID:2467746 GO_REF:0000024 NCBI chr 1:95,856,039...95,876,434
Ensembl chr 1:95,856,036...95,876,392
JBrowse link
G Son SON DNA and RNA binding protein involved_in ISO (PMID:27545680) RGD PMID:27545680 NCBI chr11:30,850,890...30,923,167
Ensembl chr11:30,892,005...30,923,167
JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in IBA
ISO
PMID:21873635
(MGI:4414616|PMID:19737518)
RGD PMID:19737518 PMID:21873635 MGI:4414616, RGD:13792537 NCBI chr12:39,998,975...40,158,897
Ensembl chr12:39,999,488...40,155,725
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 acts_upstream_of_or_within ISO (PMID:28785060) RGD PMID:28785060 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Tra2b transformer 2 beta homolog involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:10749975)
GO_REF:0000024
(PMID:28785060)
RGD
UniProt
PMID:10749975 PMID:28785060 GO_REF:0000024 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
G Zfp326 zinc finger protein 326 involved_in ISO (PMID:22446626) RGD PMID:22446626 NCBI chr14:3,941,210...3,980,419
Ensembl chr14:3,941,958...3,980,384
JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001
JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326
JBrowse link
G C1qbp complement C1q binding protein involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:10022843)
UniProt
RGD
PMID:10022843 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A acts_upstream_of_or_within ISO (MGI:5317240|PMID:21470964) RGD PMID:21470964 MGI:5317240 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3814796|PMID:18480465)
Ensembl
RGD
PMID:18480465 GO_REF:0000107 MGI:3814796 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5532638|PMID:23636947)
Ensembl
RGD
PMID:23636947 GO_REF:0000107 MGI:5532638 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:22570490 RGD:9999428 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO (MGI:3615094|PMID:16376875) RGD PMID:16376875 MGI:3615094 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5532638|PMID:23636947)
RGD PMID:23636947 PMID:21873635 MGI:5532638, RGD:13792537 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:15009664)
(MGI:6271441|PMID:17679093)
(MGI:5532638|PMID:23636947)
GO_REF:0000024
RGD
UniProt
PMID:15009664 PMID:17679093 PMID:23636947 GO_REF:0000024 MGI:5532638 MGI:6271441 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 5:74,313,536...74,399,439
Ensembl chr 5:74,315,101...74,399,791
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5532638|PMID:23636947)
Ensembl
RGD
PMID:23636947 GO_REF:0000107 MGI:5532638 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm42 RNA binding motif protein 42 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 1:85,898,618...85,908,569
Ensembl chr 1:85,898,625...85,908,573
JBrowse link
G Rbmxl1 RBMX like 1 involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS
(PMID:12665594)
GO_REF:0000024
RGD
UniProt
PMID:12665594 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
JBrowse link
G Sfswap splicing factor SWAP involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:11684676)
(MGI:3688015|PMID:11684676)
RGD PMID:11684676 MGI:3688015 NCBI chr 5:148,088,765...148,102,964
Ensembl chr 5:148,088,823...148,101,768
JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 5:144,060,981...144,090,798
Ensembl chr 5:144,061,463...144,089,229
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in ISO
ISS
(PMID:15009664)
GO_REF:0000024
RGD
UniProt
PMID:15009664 GO_REF:0000024 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499
JBrowse link
G Tra2b transformer 2 beta homolog acts_upstream_of_or_within ISO (MGI:5304203|PMID:22194695) RGD PMID:22194695 MGI:5304203 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
JBrowse link
negative regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 IMP RGD PMID:19116344 RGD:2313309 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817
JBrowse link
G LOC100361854 ribosomal protein S26-like involved_in ISO (PMID:15716004) RGD PMID:15716004 NCBI chr  X:107,822,116...107,822,555
Ensembl chr  X:107,822,178...107,822,525
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO (PMID:18335065) RGD PMID:18335065 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in IMP
ISO
(PMID:18335065) RGD PMID:18335065 PMID:18534753 RGD:10045970 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 involved_in ISO
IEA
(PMID:18335065)
GO_REF:0000107
RGD
Ensembl
PMID:18335065 GO_REF:0000107 NCBI chr 5:74,313,536...74,399,439
Ensembl chr 5:74,315,101...74,399,791
JBrowse link
G Rps13 ribosomal protein S13 involved_in ISO (PMID:17881366) RGD PMID:17881366 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:19328063)
(MGI:3840374|PMID:19328063)
RGD PMID:19328063 MGI:3840374 NCBI chr 7:130,512,428...130,543,637
Ensembl chr 7:130,527,316...130,543,633
JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07061152.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:108,405,707...108,406,249 JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Cirbp cold inducible RNA binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,533,857...9,538,899 JBrowse link
G Dazap1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5532638|PMID:23636947)
RGD PMID:23636947 PMID:21873635 MGI:5532638, RGD:13792537 NCBI chr 7:9,423,673...9,448,116
Ensembl chr 7:9,424,178...9,538,818
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (MGI:3814796|PMID:18480465) RGD PMID:18480465 MGI:3814796 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532638|PMID:23636947)
GO_REF:0000107
RGD
Ensembl
PMID:23636947 GO_REF:0000107 MGI:5532638 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 1:196,315,112...196,320,880
Ensembl chr 1:196,315,115...196,319,156
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
JBrowse link
G Ncl nucleolin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in ISO
ISS
(PMID:28221134)
GO_REF:0000024
RGD
UniProt
PMID:28221134 GO_REF:0000024 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr15:81,269,413...81,308,734
Ensembl chr15:81,269,416...81,308,734
JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO UniProtKB:Q8IWL8 (PMID:16186110) RGD PMID:16186110 NCBI chr13:73,528,746...73,539,295
Ensembl chr13:73,528,210...73,539,355
JBrowse link
G Prpf19 pre-mRNA processing factor 19 acts_upstream_of_or_within ISO (MGI:3814796|PMID:18480465) RGD PMID:18480465 MGI:3814796 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Rbm3 RNA binding motif protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:14,348,909...14,352,387
Ensembl chr  X:14,348,910...14,353,580
JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743
JBrowse link
G Rbmxl1 RBMX like 1 involved_in IDA
IBA
PMID:19282290
PMID:21873635
UniProt
GO_Central
PMID:19282290 PMID:21873635 RGD:2316827, RGD:13792537 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Rbmxl1b RNA binding motif protein, X-linked-like 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:43,956,265...43,957,973
Ensembl chr 4:43,956,281...43,957,944
JBrowse link
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:415,117...425,460
Ensembl chr  Y:415,178...425,426
JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5532638|PMID:23636947)
RGD PMID:23636947 PMID:21873635 MGI:5532638, RGD:13792537 NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959
JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 1:95,856,039...95,876,434
Ensembl chr 1:95,856,036...95,876,392
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:12840015) RGD PMID:12840015 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:20123736)
UniProt
RGD
PMID:20123736 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Tra2a transformer 2 alpha homolog involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5304203|PMID:22194695)
RGD PMID:22194695 PMID:21873635 MGI:5304203, RGD:13792537 NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712
JBrowse link
G Tra2b transformer 2 beta homolog involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:2176173|MGI:4450919 (MGI:5304203|PMID:22194695)
(PMID:15009664)
PMID:21873635
UniProt
RGD
PMID:15009664 PMID:22194695 PMID:21873635 GO_REF:0000024 MGI:5304203, RGD:13792537 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
G Zfp64 zinc finger protein 64 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 3:157,666,819...157,695,774
Ensembl chr 3:157,633,211...157,695,809
JBrowse link
positive regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO
IMP
(PMID:28377597) RGD PMID:28377597 PMID:28377597 RGD:13464257 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in ISO (PMID:11779464), (PMID:19622636)
(MGI:6114871|PMID:25164867)
RGD PMID:11779464 PMID:19622636 PMID:25164867 MGI:6114871 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029
JBrowse link
G Habp4 hyaluronan binding protein 4 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:19523114)
PMID:21873635
UniProt
RGD
PMID:19523114 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:934,931...957,604
Ensembl chr17:935,654...957,565
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:22684629 RGD:10002775 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like involved_in ISO (PMID:18669861) RGD PMID:18669861 NCBI chr 6:14,969,953...15,000,574
Ensembl chr 6:14,970,057...14,999,745
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO (PMID:20625543) RGD PMID:20625543
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO (PMID:20625543) RGD PMID:20625543 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 IMP RGD PMID:11118435 RGD:632715 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO
IEA
ISS
(PMID:20348923)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20348923 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Polr2a RNA polymerase II subunit A involved_in ISO (PMID:21536736) RGD PMID:21536736 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455
JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
ISO
PMID:22466703
(MGI:5442495|PMID:22466703)
(PMID:22466703)
RGD PMID:22466703 PMID:22466703 MGI:5442495, RGD:7241566 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISO
ISS
(PMID:22246180)
GO_REF:0000024
RGD
UniProt
PMID:22246180 GO_REF:0000024 NCBI chr18:54,013,374...54,024,182
Ensembl chr18:54,013,351...54,024,569
JBrowse link
G Setx senataxin involved_in ISO (PMID:19515850) RGD PMID:19515850 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803
JBrowse link
G Slc38a2 solute carrier family 38, member 2 involved_in ISO UniProtKB:P17861 (PMID:22215663) RGD PMID:22215663 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
JBrowse link
G Smn1 survival of motor neuron 1, telomeric involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5318917|PMID:22037760)
Ensembl
RGD
PMID:22037760 GO_REF:0000107 MGI:5318917 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IMP RGD PMID:16308321 RGD:11038784 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IMP RGD PMID:9199345 RGD:11039429 NCBI chr 6:100,605,165...100,610,192
Ensembl chr 6:100,605,456...100,610,177
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:21536736) RGD PMID:21536736 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:11283611) RGD PMID:11283611 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07065078.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:6402838|PMID:32109384)
RGD PMID:32109384 PMID:21873635 MGI:6402838, RGD:13792537 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333
JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in IBA
ISO
PMID:21873635
(PMID:11158314)
RGD PMID:11158314 PMID:21873635 RGD:13792537 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:19720736)
(PMID:11158314)
RGD PMID:11158314 PMID:19720736 PMID:21873635 RGD:13792537 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in ISO
IBA
(PMID:11158314)
PMID:21873635
RGD PMID:11158314 PMID:21873635 RGD:13792537 NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322
JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in IBA
ISO
PMID:21873635
(PMID:14761971)
RGD PMID:14761971 PMID:21873635 RGD:13792537 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041
JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:23022728)
(MGI:5819339|PMID:23022728)
RGD PMID:23022728 MGI:5819339 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:21343338), (PMID:23022728)
(MGI:5819339|PMID:23022728)
RGD PMID:21343338 PMID:23022728 MGI:5819339 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IDA PMID:22767602 UniProt PMID:22767602 RGD:8554210 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Fam172a family with sequence similarity 172, member A involved_in ISO (MGI:6113784|PMID:29311329) RGD PMID:29311329 MGI:6113784 NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
JBrowse link
G Fblim1 filamin binding LIM protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:153,883,946...153,915,524
Ensembl chr 5:153,883,960...153,913,757
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO
IBA
ISS
IEA
(PMID:18653529)
(MGI:5009520|PMID:18653529)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:18653529 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5009520, RGD:13792537 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:116,884,167...116,937,586
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) RGD PMID:25689357 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in ISO
ISS
(PMID:25623890)
(MGI:5441689|PMID:22523384)
GO_REF:0000024
RGD
UniProt
PMID:22523384 PMID:25623890 GO_REF:0000024 MGI:5441689 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:22325991)
Ensembl
RGD
PMID:22325991 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
IDA
IBA
ISO
GO_REF:0000024
PMID:15345239
PMID:21873635
(PMID:24514149)
UniProt
RGD
PMID:24514149 PMID:15345239 PMID:21873635 GO_REF:0000024, RGD:1358238, RGD:13792537 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IDA
IBA
PMID:15345239
PMID:21873635
UniProt
GO_Central
PMID:15345239 PMID:21873635 RGD:1358238, RGD:13792537 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460
JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISS
ISO
GO_REF:0000024
(PMID:22203037)
UniProt
RGD
PMID:22203037 GO_REF:0000024 NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5009479|PMID:19720736)
RGD PMID:19720736 PMID:21873635 MGI:5009479, RGD:13792537 NCBI chr15:97,385,238...97,542,924
Ensembl chr15:97,385,244...97,542,937
JBrowse link
G Mbnl3 muscleblind-like splicing regulator 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:130,641,942...130,737,179
Ensembl chr  X:130,648,538...130,737,056
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
PMID:9525963
(MGI:1202143|PMID:9525963)
GO_REF:0000107
RGD
Ensembl
PMID:9525963 PMID:9525963 GO_REF:0000107 MGI:1202143, RGD:8553451 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in IBA
ISO
IEA
ISS
PMID:21873635
(MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:14615540 PMID:17065982 PMID:27223325 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5789071 MGI:6716952 MGI:6718240, RGD:13792537 NCBI chr 6:63,780,105...63,905,950
Ensembl chr 6:63,783,489...63,906,289
JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IBA
ISO
PMID:21873635
(MGI:3587155|PMID:16041372), (MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)
(PMID:32197073)
RGD PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 PMID:32197073 More... MGI:3587155 MGI:5789071 MGI:6716952 MGI:6718240, RGD:13792537 NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21296756)
UniProt
RGD
PMID:21296756 GO_REF:0000024 NCBI chr10:61,880,807...61,914,471
Ensembl chr10:61,880,825...61,914,471
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO
ISS
(PMID:16260624), (PMID:21518792)
GO_REF:0000024
RGD
UniProt
PMID:16260624 PMID:21518792 GO_REF:0000024 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 7:107,782,770...107,793,814
Ensembl chr 7:107,782,770...107,794,531
JBrowse link
G Raver1 ribonucleoprotein, PTB-binding 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:19,610,464...19,629,188
Ensembl chr 8:19,610,466...19,629,152
JBrowse link
G Raver2 ribonucleoprotein, PTB-binding 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:115,700,985...115,780,465
Ensembl chr 5:115,701,326...115,778,792
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5476405|PMID:23300487)
RGD PMID:23300487 PMID:21873635 PMID:21873635 MGI:5476405, RGD:13792537, RGD:13792537 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3770484|PMID:17715393), (MGI:5284784|PMID:17101796)
MGI:1926224|MGI:4838182 (MGI:5312167|PMID:22357600)
RGD PMID:17101796 PMID:17715393 PMID:22357600 PMID:21873635 MGI:3770484 MGI:5284784 MGI:5312167, RGD:13792537 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
JBrowse link
G Rbfox3 RNA binding fox-1 homolog 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5140633|PMID:21747913)
RGD PMID:21747913 PMID:21873635 MGI:5140633, RGD:13792537 NCBI chr10:103,720,355...104,157,277
Ensembl chr10:103,720,636...104,156,935
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm11 RNA binding motif protein 11 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:21984414)
RGD PMID:21984414 PMID:21873635 RGD:13792537 NCBI chr11:14,234,851...14,244,846
Ensembl chr11:14,234,890...14,244,090
JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO
IBA
(PMID:26575292)
PMID:21873635
(MGI:6158801|PMID:25468569)
RGD PMID:25468569 PMID:26575292 PMID:21873635 MGI:6158801, RGD:13792537 NCBI chr 2:194,945,717...194,954,523
Ensembl chr 2:194,945,974...194,954,703
JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO
IBA
(PMID:16129689)
PMID:21873635
RGD PMID:16129689 PMID:21873635 RGD:13792537 NCBI chr 8:107,543,542...107,548,195
Ensembl chr 8:107,525,898...107,551,696
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:26844700), (PMID:26990106), (PMID:29104163)
(MGI:6148527|PMID:25313962)
RGD PMID:25313962 PMID:26844700 PMID:26990106 PMID:29104163 MGI:6148527 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rbm25 RNA binding motif protein 25 involved_in ISO (PMID:18663000) RGD PMID:18663000 NCBI chr 6:103,271,771...103,319,090 JBrowse link
G Rbm25l1 RNA binding motif protein 25-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:10,267,026...10,270,510 JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in
acts_upstream_of_or_within
ISO (PMID:12628928), (PMID:16260624), (PMID:16777844), (PMID:16934801), (PMID:21518792)
MGI:5467987|MGI:5467988 (MGI:5466631|PMID:23129807)
RGD PMID:12628928 PMID:16260624 PMID:16777844 PMID:16934801 PMID:21518792 More... MGI:5466631 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISO
ISS
(PMID:18840686), (PMID:18951082)
GO_REF:0000024
RGD
UniProt
PMID:18840686 PMID:18951082 GO_REF:0000024 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
JBrowse link
G Rbm7 RNA binding motif protein 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:48,831,894...48,838,399
Ensembl chr 8:48,831,894...48,838,411
JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISS
ISO
GO_REF:0000024
(PMID:22203037)
UniProt
RGD
PMID:22203037 GO_REF:0000024 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959
JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in ISO (PMID:12165565), (PMID:12761049) RGD PMID:12165565 PMID:12761049 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743
JBrowse link
G Rbmxl1 RBMX like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:6201823|PMID:21884984)
UniProt
RGD
PMID:21884984 GO_REF:0000024 MGI:6201823 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS
(PMID:22203037)
GO_REF:0000024
RGD
UniProt
PMID:22203037 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:20966198), (PMID:22203037) RGD PMID:20966198 PMID:22203037 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300
JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within
ISO (PMID:29961578)
MGI:1856676 (MGI:5468890|PMID:23055939)
(MGI:6201863|PMID:25727884)
RGD PMID:23055939 PMID:25727884 PMID:29961578 MGI:5468890 MGI:6201863 NCBI chr12:39,998,975...40,158,897
Ensembl chr12:39,999,488...40,155,725
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 acts_upstream_of_or_within ISO (MGI:5317240|PMID:21470964) RGD PMID:21470964 MGI:5317240 NCBI chr10:102,052,158...102,055,365
Ensembl chr10:102,052,314...102,055,338
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:23132731)
(PMID:24440982)
UniProt
RGD
PMID:23132731 PMID:24440982 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS
(PMID:20932480)
GO_REF:0000024
RGD
UniProt
PMID:20932480 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in
acts_upstream_of_or_within
ISO (PMID:14966131), (PMID:17580305)
(PMID:10938105), (PMID:11514562)
RGD PMID:10938105 PMID:11514562 PMID:14966131 PMID:17580305 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
JBrowse link
G Tra2b transformer 2 beta homolog involved_in ISS
ISO
GO_REF:0000024
(PMID:12165565), (PMID:12761049), (PMID:25689357)
UniProt
RGD
PMID:12165565 PMID:12761049 PMID:25689357 GO_REF:0000024 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
G Wtap WT1 associated protein involved_in IBA
ISO
PMID:21873635
(PMID:24407421)
RGD PMID:24407421 PMID:21873635 RGD:13792537 NCBI chr 1:47,665,965...47,691,067
Ensembl chr 1:47,665,965...47,691,065
JBrowse link
G Ythdc1 YTH domain containing 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:6161521|PMID:29799838)
RGD PMID:29799838 PMID:21873635 MGI:6161521, RGD:13792537 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO
ISS
IEA
(PMID:24514149)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:24514149 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
G Zc3h10 zinc finger CCCH type containing 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:973,415...977,742
Ensembl chr 7:972,855...979,349
JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in ISO
ISS
(PMID:19574390)
(MGI:4940413|PMID:21300889)
GO_REF:0000024
RGD
UniProt
PMID:19574390 PMID:21300889 GO_REF:0000024 MGI:4940413 NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in IBA
ISO
PMID:21873635
(MGI:5302133|PMID:22196734)
RGD PMID:22196734 PMID:21873635 MGI:5302133, RGD:13792537 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in IBA
ISO
PMID:21873635
(MGI:5302133|PMID:22196734)
RGD PMID:22196734 PMID:21873635 MGI:5302133, RGD:13792537 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IEA
ISO
IBA
GO_REF:0000107
GO_REF:0000117
(MGI:5302133|PMID:22196734)
PMID:21873635
Ensembl
UniProt
RGD
PMID:22196734 PMID:21873635 GO_REF:0000107 GO_REF:0000117 MGI:5302133, RGD:13792537 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460
JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO
IEA
ISS
(PMID:32017898)
GO_REF:0000107
(MGI:6400674|PMID:32017896)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32017896 PMID:32017898 GO_REF:0000024 GO_REF:0000107 MGI:6400674 NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865
JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220
JBrowse link
G Mettl16 methyltransferase like 16 involved_in
NOT|involved_in
ISO (PMID:28525753)
(MGI:6114846|PMID:29262316)
RGD PMID:28525753 PMID:29262316 MGI:6114846 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
JBrowse link
G Qk quaking, KH domain containing RNA binding involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbm39 RNA binding motif protein 39 involved_in ISO (PMID:15694343), (PMID:28302793), (PMID:28437394) RGD PMID:15694343 PMID:28302793 PMID:28437394 NCBI chr 3:144,662,998...144,696,222
Ensembl chr 3:144,663,001...144,696,213
JBrowse link
G Sf1 splicing factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
JBrowse link
G Son SON DNA and RNA binding protein involved_in IBA
ISO
PMID:21873635
(PMID:21504830)
RGD PMID:21504830 PMID:21873635 RGD:13792537 NCBI chr11:30,850,890...30,923,167
Ensembl chr11:30,892,005...30,923,167
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:26876937) RGD PMID:26876937 NCBI chr 5:148,088,765...148,102,964
Ensembl chr 5:148,088,823...148,101,768
JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:26876937) RGD PMID:26876937 NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078
JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:11106748), (PMID:7488725) RGD PMID:7488725 PMID:11106748 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
JBrowse link
G Ythdc1 YTH domain containing 1 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:26876937), (PMID:28984244)
UniProt
RGD
PMID:26876937 PMID:28984244 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      regulation of metabolic process 6832
        regulation of macromolecule metabolic process 6324
          regulation of gene expression 4866
            regulation of RNA splicing 168
              negative regulation of RNA splicing + 30
              positive regulation of RNA splicing + 47
              regulation of mRNA splicing, via spliceosome + 110
Path 2
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      cellular metabolic process 10719
        cellular aromatic compound metabolic process 5635
          nucleobase-containing compound metabolic process 5410
            nucleic acid metabolic process 4926
              RNA metabolic process 4397
                RNA processing 929
                  RNA splicing 399
                    regulation of RNA splicing 168
                      negative regulation of RNA splicing + 30
                      positive regulation of RNA splicing + 47
                      regulation of mRNA splicing, via spliceosome + 110
paths to the root