Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:male sex determination
go back to main search page
Accession:GO:0030238 term browser browse the term
Definition:The specification of male sex of an individual organism.


show annotations for term's descendants           Sort by:
male sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhh desert hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1095403 (PMID:17495005) RGD PMID:17495005 NCBI chr 7:130,050,910...130,056,406
Ensembl chr 7:130,050,910...130,056,406 		JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 involved_in ISO (MGI:1926717|PMID:11040213), (MGI:4420727|PMID:20007774), (MGI:4839662|PMID:20951351) RGD PMID:11040213 PMID:20007774 PMID:20951351 MGI:1926717 MGI:4420727 MGI:4839662 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961|MGI:98371|MGI:98660|MGI:98957 (PMID:16700629) RGD PMID:16700629 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 IMP RGD PMID:7012206 RGD:9685140 NCBI chr15:41,972,482...41,976,690
Ensembl chr15:41,972,905...41,973,581
Ensembl chr15:41,972,905...41,973,581 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor acts_upstream_of_or_within ISO MGI:1926486 (PMID:14628051) RGD PMID:14628051 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Insr insulin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857204 (PMID:14628051)		 Ensembl
RGD		 PMID:14628051 GO_REF:0000107 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Insrr insulin receptor-related receptor acts_upstream_of_or_within ISO MGI:2653019 (PMID:14628051) RGD PMID:14628051 NCBI chr 2:173,255,335...173,274,800
Ensembl chr 2:173,255,414...173,274,800 		JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2159321|MGI:98660 (PMID:12679814), (PMID:15944188)		 Ensembl
RGD		 PMID:12679814 PMID:15944188 GO_REF:0000107 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011 		JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 involved_in ISO (PMID:10369247) RGD PMID:10369247 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328 		JBrowse link
G Ptgdr prostaglandin D2 receptor acts_upstream_of_or_within ISO (PMID:16185683) RGD PMID:16185683 NCBI chr15:17,360,304...17,367,679
Ensembl chr15:17,360,304...17,367,679 		JBrowse link
G Sf1 splicing factor 1 acts_upstream_of_or_within ISO MGI:94891 (PMID:17495005) RGD PMID:17495005 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5532793|PMID:23987514) RGD PMID:23987514 MGI:5532793 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:104723|MGI:98660 (PMID:16700629) RGD PMID:16700629 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Sry sex determining region Y involved_in
acts_upstream_of_or_within		 IEP
ISO		 (MGI:6471836|PMID:33004521)
MGI:104723|MGI:1352460|MGI:98371 (PMID:15879091), (PMID:16700629)		 RGD PMID:15879091 PMID:16700629 PMID:33004521 PMID:8430080 MGI:6471836, RGD:1598778 NCBI chr  Y:441,525...442,037 JBrowse link
male germ-line sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k4 mitogen activated protein kinase kinase kinase 4 acts_upstream_of_or_within ISO MGI:1856634 (PMID:6855886) RGD PMID:6855886 NCBI chr 1:48,431,801...48,519,358
Ensembl chr 1:48,431,830...48,519,358 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2385468|MGI:2673819|MGI:3580900 (PMID:11431689), (PMID:16207837)		 UniProt
RGD		 PMID:11431689 PMID:16207837 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
male somatic sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856319 (PMID:5452809)		 Ensembl
RGD		 PMID:5452809 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19694
    multicellular organismal process 8811
      multicellular organism development 5239
        male sex determination 16
          male germ-line sex determination 2
          male somatic sex determination 1
Path 2
Term Annotations click to browse term
  biological_process 19694
    developmental process 6963
      anatomical structure development 6486
        multicellular organism development 5239
          male sex determination 16
            male germ-line sex determination 2
            male somatic sex determination 1
paths to the root