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ONTOLOGY REPORT - ANNOTATIONS

Term:COPII vesicle coat
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Accession:GO:0030127 term browser browse the term
Definition:One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state.


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COPII vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cideb cell death-inducing DFFA-like effector b part_of ISO (PMID:23297397), (PMID:30858281) RGD PMID:23297397 PMID:30858281 NCBI chr15:29,252,208...29,256,482
Ensembl chr15:29,252,213...29,256,605 		JBrowse link
G Klhl12 kelch-like family member 12 part_of ISO
IEA
ISS		 (PMID:27716508)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643 		JBrowse link
G Pdcd6 programmed cell death 6 part_of ISO
ISS		 (PMID:27716508)
GO_REF:0000024		 RGD
UniProt		 PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189 		JBrowse link
G Pef1 penta-EF hand domain containing 1 part_of ISO
IEA
ISS		 (PMID:27716508)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A part_of
is_active_in		 ISO (PMID:17499046)
(PMID:32358066)		 RGD PMID:17499046 PMID:32358066 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B is_active_in
part_of		 ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:32358066)		 UniProt
GO_Central
RGD		 PMID:32358066 GO_REF:0000024 GO_REF:0000033 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173 		JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr 6:76,658,793...76,706,125
Ensembl chr 6:76,658,427...76,706,035 		JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:131,939,011...131,981,489
Ensembl chr 3:131,939,337...131,981,489 		JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr10:35,946,901...36,024,353
Ensembl chr10:35,947,031...36,024,353 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component part_of ISO
IBA		 (PMID:10075675), (PMID:17499046)
GO_REF:0000033
(PMID:19966784)		 RGD
GO_Central		 PMID:10075675 PMID:17499046 PMID:19966784 GO_REF:0000033 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component part_of ISO
IBA		 (PMID:10075675), (PMID:10329445), (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:10075675 PMID:10329445 PMID:17499046 GO_REF:0000033 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422 		JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587 		JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:17499046), (PMID:27716508)		 UniProt
GO_Central
Ensembl
RGD		 PMID:17499046 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273 		JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,376,283...243,404,557
Ensembl chr 1:243,378,456...243,404,557 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20827
    protein-containing complex 6555
      membrane protein complex 1410
        membrane coat 103
          vesicle coat 61
            COPII vesicle coat 15
Path 2
Term Annotations click to browse term
  cellular_component 20827
    cellular anatomical structure 20627
      intracellular anatomical structure 15182
        intracellular organelle 13564
          intracellular membrane-bounded organelle 12005
            intracellular vesicle 2058
              cytoplasmic vesicle 2049
                transport vesicle 462
                  transport vesicle membrane 256
                    ER to Golgi transport vesicle membrane 29
                      COPII vesicle coat 15
paths to the root