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ONTOLOGY REPORT - ANNOTATIONS

Term:membrane coat
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Accession:GO:0030117 term browser browse the term
Definition:Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.


show annotations for term's descendants           Sort by:
membrane coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071244.1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO (PMID:11879655) RGD PMID:11879655 NCBI chr 1:95,384,306...95,414,170
Ensembl chr 1:95,384,309...95,414,147 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of ISO (PMID:11879655) RGD PMID:11879655 NCBI chr 1:196,652,315...196,725,609
Ensembl chr 1:196,652,337...196,725,603 		JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:77,417,496...77,428,903
Ensembl chr 1:77,417,477...77,428,905 		JBrowse link
G Chmp1b charged multivesicular body protein 1B part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp4b charged multivesicular body protein 4B part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844 		JBrowse link
G Cltc clathrin heavy chain part_of ISO (PMID:11879655) RGD PMID:11879655 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737 		JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:99,161,324...99,183,452
Ensembl chr 8:99,161,350...99,185,197 		JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,366,540...120,392,502
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Dnm1 dynamin 1 part_of IEA
ISO		 GO_REF:0000107
(PMID:11879655)		 Ensembl
RGD		 PMID:11879655 GO_REF:0000107 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Synj1 synaptojanin 1 part_of ISO (PMID:11879655) RGD PMID:11879655 NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
AP-1 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin part_of ISO
IBA		 (PMID:15758025)
GO_REF:0000033		 RGD
GO_Central		 PMID:15758025 GO_REF:0000033 NCBI chr14:94,871,429...94,925,625
Ensembl chr14:94,871,429...94,925,376 		JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:37,744,633...37,831,134
Ensembl chr19:37,744,633...37,829,167 		JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,571,571...28,579,421
Ensembl chr15:28,571,568...28,589,004 		JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,625,267...19,635,792
Ensembl chr12:19,625,332...19,756,713 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262 		JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:80,950,402...81,009,889
Ensembl chr 9:80,950,715...81,009,798 		JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:131,882,866...131,889,662
Ensembl chr 6:131,882,609...131,889,662 		JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:14724281 GO_REF:0000033, RGD:2317430 NCBI chr16:7,713,630...7,716,491 JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO
IBA		 (PMID:23676497)
GO_REF:0000033		 RGD
GO_Central		 PMID:23676497 GO_REF:0000033 NCBI chr 1:95,384,306...95,414,170
Ensembl chr 1:95,384,309...95,414,147 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of ISO
IBA
IEA
IMP		 (PMID:23676497)
GO_REF:0000033
GO_REF:0000117
PMID:12086608		 RGD
GO_Central
UniProt		 PMID:23676497 PMID:12086608 GO_REF:0000033 GO_REF:0000117, RGD:12793054 NCBI chr 1:196,652,315...196,725,609
Ensembl chr 1:196,652,337...196,725,603 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:12086608), (PMID:23676497)
(PMID:23676497)		 RGD PMID:12086608 PMID:23676497 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IDA
ISO
IBA		 PMID:12086608
(PMID:23676497)
GO_REF:0000033		 RGD
GO_Central		 PMID:23676497 PMID:12086608 GO_REF:0000033, RGD:12793054 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140 		JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IDA
ISO
IEA		 (PMID:12086608)
GO_REF:0000107
GO_REF:0000002
PMID:2040623		 RGD
Ensembl
InterPro		 PMID:12086608 PMID:7593184 PMID:2040623 GO_REF:0000002 GO_REF:0000107, RGD:2306270, RGD:727584 NCBI chr 1:77,417,496...77,428,903
Ensembl chr 1:77,417,477...77,428,905 		JBrowse link
G Btbd8 BTB domain containing 8 located_in IDA PMID:29262337 UniProt PMID:29262337 RGD:13601995 NCBI chr14:2,265,187...2,338,426
Ensembl chr14:2,266,454...2,334,393 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (PMID:17626015) RGD PMID:17626015 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of ISS
ISO
IEA		 PMID:17626015
(PMID:17626015)
GO_REF:0000107		 RGD
Ensembl		 PMID:17626015 PMID:17626015 GO_REF:0000107, RGD:8554282 NCBI chr 5:117,536,752...117,734,593
Ensembl chr 5:117,537,746...117,734,575 		JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:14724281 GO_REF:0000033, RGD:2317430 NCBI chr16:7,713,630...7,716,491 JBrowse link
G Ston1 stonin 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449 		JBrowse link
G Ston2 stonin 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:110,567,485...110,676,376
Ensembl chr 6:110,567,485...110,676,376 		JBrowse link
G Tbc1d5 TBC1 domain family, member 5 located_in ISO (PMID:24603492) RGD PMID:24603492 NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913 		JBrowse link
AP-3 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 part_of ISO (PMID:9118953) RGD PMID:9118953 NCBI chr18:39,462,728...39,531,622
Ensembl chr18:39,462,765...39,531,622 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 part_of ISO (PMID:9118953) RGD PMID:9118953 NCBI chr 1:133,818,825...133,859,269
Ensembl chr 1:133,818,825...133,859,322 		JBrowse link
G ENSRNOG00000062839 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr19:29,819,856...29,820,542 JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes part_of ISO (PMID:21411634) RGD PMID:21411634 NCBI chr 8:44,684,129...44,698,568
Ensembl chr 8:44,684,127...44,698,568 		JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes part_of ISO (PMID:21411634) RGD PMID:21411634 NCBI chr 3:117,622,534...117,644,041
Ensembl chr 3:117,622,542...117,646,441 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes part_of ISO (PMID:21411634) RGD PMID:21411634 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes part_of
located_in		 IEA
ISO		 GO_REF:0000107
(PMID:21411634)		 Ensembl
RGD		 PMID:21411634 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393 		JBrowse link
G Vps39 VPS39 subunit of HOPS complex part_of ISO (PMID:21411634) RGD PMID:21411634 NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975 		JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in ISO (PMID:21411634) RGD PMID:21411634 NCBI chr17:46,063,132...46,227,533
Ensembl chr17:46,063,124...46,227,791 		JBrowse link
AP-4 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of ISO (PMID:10066790) RGD PMID:10066790 NCBI chr 2:191,318,485...191,330,531
Ensembl chr 2:191,318,482...191,330,531 		JBrowse link
G Ap4e1 adaptor related protein complex 4 subunit epsilon 1 part_of ISO
IBA		 (PMID:10066790)
GO_REF:0000033		 RGD
GO_Central		 PMID:10066790 GO_REF:0000033 NCBI chr 3:114,272,997...114,339,484
Ensembl chr 3:114,272,956...114,336,752 		JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of ISS
ISO		 GO_REF:0000024
(PMID:10066790), (PMID:11802162), (PMID:29180427)		 UniProt
RGD		 PMID:10066790 PMID:11802162 PMID:29180427 GO_REF:0000024 NCBI chr12:17,049,766...17,055,954
Ensembl chr12:17,049,777...17,058,026 		JBrowse link
G Ap4s1 adaptor related protein complex 4 subunit sigma 1 part_of ISO (PMID:10066790) RGD PMID:10066790 NCBI chr 6:69,133,403...69,174,488
Ensembl chr 6:69,133,373...69,175,496 		JBrowse link
G Tepsin TEPSIN, adaptor related protein complex 4 accessory protein located_in IDA PMID:22472443 UniProt PMID:22472443 RGD:11250428 NCBI chr10:105,373,939...105,381,310
Ensembl chr10:105,373,941...105,382,266 		JBrowse link
AP-5 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511 		JBrowse link
AP-type membrane coat adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of TAS PMID:8262066 PINC PMID:8262066 RGD:2306271 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013 		JBrowse link
G Ap5b1 adaptor related protein complex 5 subunit beta 1 part_of ISO
IBA
ISS		 (PMID:22022230)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:22022230 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:202,876,272...202,880,303
Ensembl chr 1:202,876,272...202,880,289 		JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 part_of ISO
IBA
ISS		 (PMID:22022230)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:22022230 GO_REF:0000024 GO_REF:0000033 NCBI chr15:22,355,478...22,385,222
Ensembl chr15:22,355,500...22,377,750 		JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 part_of ISO
IBA		 (PMID:22022230)
GO_REF:0000033		 RGD
GO_Central		 PMID:22022230 GO_REF:0000033 NCBI chr 3:118,429,618...118,432,929
Ensembl chr 3:118,429,637...118,432,926 		JBrowse link
clathrin adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778 		JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 part_of IEA GO_REF:0000002
GO_REF:0000104		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr16:17,586,886...17,602,410
Ensembl chr16:17,584,730...17,602,403 		JBrowse link
G Ap1m2 adaptor related protein complex 1 subunit mu 2 part_of IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:19,838,579...19,856,560
Ensembl chr 8:19,838,580...19,856,482 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO
IEA		 (PMID:8262066)
GO_REF:0000002		 RGD
InterPro		 PMID:8262066 GO_REF:0000002 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013 		JBrowse link
G Ap2b1-ps1 adaptor related protein complex 2 subunit beta 1, pseudogene 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:34,292,190...34,295,856
Ensembl chr 1:34,291,930...34,295,752
Ensembl chr 1:34,291,930...34,295,752 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140 		JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 part_of IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 part_of IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr16:69,217,526...69,237,372
Ensembl chr16:69,217,633...69,235,431 		JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:191,318,485...191,330,531
Ensembl chr 2:191,318,482...191,330,531 		JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of IEA GO_REF:0000002
GO_REF:0000104		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr12:17,049,766...17,055,954
Ensembl chr12:17,049,777...17,058,026 		JBrowse link
G ENSRNOG00000064118 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr17:40,780,449...40,781,959 JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 IDA RGD PMID:12564930 RGD:727577 NCBI chr 6:58,489,060...58,520,322
Ensembl chr 6:58,489,010...58,520,330 		JBrowse link
clathrin coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IC PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IDA PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013 		JBrowse link
G Clta clathrin, light chain A part_of IDA
ISO		 (PMID:11756460) RGD PMID:11756460 PMID:1490999 PMID:17978091 RGD:2303177, RGD:2303184 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472 		JBrowse link
G Cltb clathrin, light chain B IDA RGD PMID:1490999 PMID:17978091 RGD:2303177, RGD:2303184 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169 		JBrowse link
G Cltc clathrin heavy chain part_of TAS
ISO
IDA		 (PMID:11756460) RGD PMID:11756460 PMID:3480512 PMID:17978091 PMID:1490999 RGD:69810, RGD:2303184, RGD:2303177 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737 		JBrowse link
G Igf2r insulin-like growth factor 2 receptor IDA RGD PMID:2971973 RGD:2303173 NCBI chr 1:47,979,109...48,067,501
Ensembl chr 1:47,979,109...48,067,501 		JBrowse link
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 part_of ISO (PMID:24855057) RGD PMID:24855057 NCBI chr 9:23,830,185...24,395,984
Ensembl chr 9:23,833,087...24,394,704 		JBrowse link
clathrin coat of coated pit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of NAS
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:3563513 GO_REF:0000002, RGD:70686 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472 		JBrowse link
G Cltb clathrin, light chain B part_of NAS PMID:3563513 RGD
UniProt		 PMID:3563513 PMID:3563513 RGD:70686, RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169 		JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737 		JBrowse link
G Dab2 DAB adaptor protein 2 part_of ISO (PMID:11247302) RGD PMID:11247302 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of IBA
ISO		 GO_REF:0000033
(PMID:18434600)		 GO_Central
RGD		 PMID:18434600 GO_REF:0000033 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15-like 1 part_of IBA
ISO		 GO_REF:0000033
(PMID:18434600)		 GO_Central
RGD		 PMID:18434600 GO_REF:0000033 NCBI chr16:17,426,345...17,501,677
Ensembl chr16:17,426,421...17,501,677 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein part_of ISO
IEA		 (PMID:10436022), (PMID:16262731)
GO_REF:0000107		 RGD
Ensembl		 PMID:10436022 PMID:16262731 GO_REF:0000107 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557 		JBrowse link
G Synj1 synaptojanin 1 part_of IDA PMID:9428629 ParkinsonsUK-UCL PMID:9428629 RGD:11059574 NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epn2 epsin 2 IDA RGD PMID:10567358 RGD:708327 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642 		JBrowse link
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472 		JBrowse link
G Cltb clathrin, light chain B part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169 		JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737 		JBrowse link
G Dnm1l dynamin 1-like NOT|part_of IDA PMID:9472031 ParkinsonsUK-UCL PMID:9472031 RGD:11535088 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482 		JBrowse link
G Synrg synergin, gamma part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:10477754 GO_REF:0000033, RGD:631945 NCBI chr10:68,848,828...68,931,252
Ensembl chr10:68,849,642...68,931,250 		JBrowse link
clathrin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 part_of IDA PMID:11877461 UniProt PMID:11877461 RGD:8553925 NCBI chr 4:119,300,128...119,451,834
Ensembl chr 4:119,295,257...119,450,969 		JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 part_of ISO (PMID:21401524) RGD PMID:21401524 NCBI chr 7:110,824,370...110,850,702
Ensembl chr 7:110,824,375...110,850,702 		JBrowse link
G Clta clathrin, light chain A part_of ISO (PMID:4066749) RGD PMID:4066749 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472 		JBrowse link
G Cltc clathrin heavy chain part_of ISO
IBA
IEA		 (PMID:4066749)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107		 RGD
GO_Central
InterPro
Ensembl		 PMID:4066749 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737 		JBrowse link
G Sclt1 sodium channel and clathrin linker 1 IDA RGD PMID:15797711 RGD:1359053 NCBI chr 2:124,605,445...124,763,964
Ensembl chr 2:124,605,658...124,764,065 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 IDA RGD PMID:15797711 RGD:1359053 NCBI chr 8:119,350,723...119,462,882
Ensembl chr 8:119,350,724...119,462,614 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes part_of
located_in		 IEA
ISO		 GO_REF:0000107
(PMID:21411634)		 Ensembl
RGD		 PMID:21411634 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393 		JBrowse link
G Vps41 VPS41 subunit of HOPS complex located_in ISO (PMID:21411634) RGD PMID:21411634 NCBI chr17:46,063,132...46,227,533
Ensembl chr17:46,063,124...46,227,791 		JBrowse link
clathrin vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of NAS
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:3563513 GO_REF:0000033, RGD:70686 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472 		JBrowse link
G Cltb clathrin, light chain B part_of NAS
IBA		 GO_REF:0000033
PMID:3563513		 GO_Central
RGD		 PMID:3563513 PMID:3563513 GO_REF:0000033, RGD:70686, RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169 		JBrowse link
G Epn1 Epsin 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,742,491...68,760,570
Ensembl chr 1:68,742,789...68,758,874 		JBrowse link
G Epn2 epsin 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642 		JBrowse link
G Epn3 epsin 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,438,978...79,449,516
Ensembl chr10:79,438,978...79,447,356 		JBrowse link
G Mycbpap Mycbp associated protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,450,319...79,470,977
Ensembl chr10:79,450,324...79,470,828 		JBrowse link
G Necap1 NECAP endocytosis associated 1 part_of IEA
ISO
IBA		 GO_REF:0000107
(PMID:14555962)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:14555962 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:156,103,935...156,119,068
Ensembl chr 4:156,103,988...156,119,068 		JBrowse link
G Necap2 NECAP endocytosis associated 2 part_of ISS
ISO
IBA		 GO_REF:0000024
(PMID:14555962)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:14555962 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:153,370,338...153,382,753
Ensembl chr 5:153,370,338...153,382,729 		JBrowse link
COPI vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071244.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Arcn1 archain 1 part_of IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247 		JBrowse link
G Copa COPI coat complex subunit alpha part_of ISO
IBA		 (PMID:14729954)
GO_REF:0000033		 RGD
GO_Central		 PMID:14729954 GO_REF:0000033 NCBI chr13:84,546,483...84,586,879
Ensembl chr13:84,545,943...84,586,874 		JBrowse link
G Copb1 COPI coat complex subunit beta 1 part_of IDA
IBA		 PMID:1840503
GO_REF:0000033		 GO_Central PMID:1840503 GO_REF:0000033, RGD:632446 NCBI chr 1:168,404,334...168,438,589
Ensembl chr 1:168,404,335...168,438,416 		JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of ISO
IBA
IEA		 (PMID:14729954), (PMID:8335000)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8335000 PMID:14729954 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:99,161,324...99,183,452
Ensembl chr 8:99,161,350...99,185,197 		JBrowse link
G Cope COPI coat complex subunit epsilon part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,114,871...19,125,076
Ensembl chr16:19,114,871...19,128,907 		JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:120,366,540...120,392,502
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Copg2 COPI coat complex subunit gamma 2 part_of ISO
IBA
IEA		 (PMID:11056392), (PMID:14729954)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002		 RGD
GO_Central
Ensembl
InterPro		 PMID:11056392 PMID:14729954 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:59,366,086...59,501,591
Ensembl chr 4:59,366,086...59,501,618 		JBrowse link
G Copz1 COPI coat complex subunit zeta 1 part_of ISO
IBA		 (PMID:11056392), (PMID:14729954)
GO_REF:0000033		 RGD
GO_Central		 PMID:11056392 PMID:14729954 GO_REF:0000033 NCBI chr 7:134,409,523...134,435,661
Ensembl chr 7:134,409,799...134,435,662 		JBrowse link
G Copz2 COPI coat complex subunit zeta 2 part_of ISO
IBA		 (PMID:14729954)
GO_REF:0000033		 RGD
GO_Central		 PMID:14729954 GO_REF:0000033 NCBI chr10:81,832,441...81,845,514
Ensembl chr10:81,832,418...81,845,514 		JBrowse link
G Dipk2a divergent protein kinase domain 2A part_of ISO (PMID:18651652) RGD PMID:18651652 NCBI chr 8:95,070,695...95,089,815
Ensembl chr 8:95,030,279...95,089,815 		JBrowse link
G ENSRNOG00000068070 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr 5:33,483,760...33,485,045 JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Scyl1 SCY1 like pseudokinase 1 part_of ISO (PMID:18556652) RGD PMID:18556652 NCBI chr 1:203,045,776...203,059,550
Ensembl chr 1:203,045,741...203,059,533 		JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 part_of IDA
IBA		 PMID:15718469
GO_REF:0000033		 GO_Central PMID:15718469 GO_REF:0000033, RGD:1599272 NCBI chr 8:90,241,516...90,249,429
Ensembl chr 8:90,241,516...90,249,346 		JBrowse link
COPII vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cideb cell death-inducing DFFA-like effector b part_of ISO (PMID:23297397), (PMID:30858281) RGD PMID:23297397 PMID:30858281 NCBI chr15:29,252,208...29,256,482
Ensembl chr15:29,252,213...29,256,605 		JBrowse link
G Klhl12 kelch-like family member 12 part_of ISO
IEA
ISS		 (PMID:27716508)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643 		JBrowse link
G Pdcd6 programmed cell death 6 part_of ISO
ISS		 (PMID:27716508)
GO_REF:0000024		 RGD
UniProt		 PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189 		JBrowse link
G Pef1 penta-EF hand domain containing 1 part_of ISO
IEA
ISS		 (PMID:27716508)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A part_of
is_active_in		 ISO (PMID:17499046)
(PMID:32358066)		 RGD PMID:17499046 PMID:32358066 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B is_active_in
part_of		 ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:32358066)		 UniProt
GO_Central
RGD		 PMID:32358066 GO_REF:0000024 GO_REF:0000033 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173 		JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr 6:76,658,793...76,706,125
Ensembl chr 6:76,658,427...76,706,035 		JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:131,939,011...131,981,489
Ensembl chr 3:131,939,337...131,981,489 		JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr10:35,946,901...36,024,353
Ensembl chr10:35,947,031...36,024,353 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component part_of ISO
IBA		 (PMID:10075675), (PMID:17499046)
GO_REF:0000033
(PMID:19966784)		 RGD
GO_Central		 PMID:10075675 PMID:17499046 PMID:19966784 GO_REF:0000033 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component part_of ISO
IBA		 (PMID:10075675), (PMID:10329445), (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:10075675 PMID:10329445 PMID:17499046 GO_REF:0000033 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422 		JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component part_of ISO
IBA		 (PMID:17499046)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 GO_REF:0000033 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587 		JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:17499046), (PMID:27716508)		 UniProt
GO_Central
Ensembl
RGD		 PMID:17499046 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273 		JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,376,283...243,404,557
Ensembl chr 1:243,378,456...243,404,557 		JBrowse link
vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273 		JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr 1:243,376,283...243,404,557
Ensembl chr 1:243,378,456...243,404,557 		JBrowse link
G Tf transferrin part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20833
    cellular anatomical structure 20633
      cytoplasm 11893
        membrane coat 103
          AP-type membrane coat adaptor complex + 47
          clathrin coat + 53
          vesicle coat + 61
Path 2
Term Annotations click to browse term
  cellular_component 20833
    cellular anatomical structure 20633
      intracellular anatomical structure 15189
        cytoplasm 11893
          membrane coat 103
            AP-type membrane coat adaptor complex + 47
            clathrin coat + 53
            vesicle coat + 61
paths to the root