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ONTOLOGY REPORT - ANNOTATIONS


Term:membrane coat
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Accession:GO:0030117 term browser browse the term
Definition:Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.


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membrane coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:22,665,128...22,676,079
Ensembl chr12:22,665,112...22,676,075
JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:32,329,883...32,376,301
Ensembl chr  X:32,329,598...32,355,307
JBrowse link
G Ap1s3 adaptor related protein complex 1 subunit sigma 3 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:85,386,752...85,445,977
Ensembl chr 9:85,387,065...85,445,939
JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr 1:100,896,582...100,926,443
Ensembl chr 1:100,896,947...100,926,335
JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr 1:214,534,217...214,607,497
Ensembl chr 1:214,534,284...214,606,169
JBrowse link
G Chmp1b charged multivesicular body protein 1B part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr18:62,923,620...62,926,150 JBrowse link
G Chmp2a charged multivesicular body protein 2A part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp4b charged multivesicular body protein 4B part_of ISO (PMID:24878737) RGD PMID:24878737 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Cltc clathrin heavy chain part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Dnm1 dynamin 1 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr 3:11,338,081...11,382,043
Ensembl chr 3:11,338,083...11,382,043
JBrowse link
G Synj1 synaptojanin 1 part_of ISO (MGI:2176305|PMID:11879655) RGD PMID:11879655 MGI:2176305 NCBI chr11:31,105,784...31,181,573
Ensembl chr11:31,104,787...31,180,642
JBrowse link
AP-1 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aftph aftiphilin part_of ISO
IBA
(PMID:15758025)
PMID:21873635
RGD PMID:15758025, PMID:21873635 RGD:13792537 NCBI chr14:104,921,633...104,975,763
Ensembl chr14:104,922,282...104,960,141
JBrowse link
G Ap1g2 adaptor related protein complex 1 subunit gamma 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,759,108...33,767,017
Ensembl chr15:33,759,001...33,766,438
JBrowse link
G Clba1 clathrin binding box of aftiphilin containing 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:137,386,694...137,393,490
Ensembl chr 6:137,386,422...137,393,506
JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14724281, PMID:21873635 RGD:2317430, RGD:13792537 NCBI chr16:8,682,668...8,685,529
Ensembl chr16:8,682,669...8,685,529
JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO
IBA
(PMID:23676497)
(MGI:5514106|PMID:23676497)
PMID:21873635
RGD PMID:23676497, PMID:21873635 MGI:5514106, RGD:13792537 NCBI chr 1:100,896,582...100,926,443
Ensembl chr 1:100,896,947...100,926,335
JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of IEA
ISO
IMP
IBA
GO_REF:0000002
GO_REF:0000107
(MGI:5514106|PMID:23676497)
PMID:12086608
PMID:21873635
(PMID:23676497)
InterPro
Ensembl
RGD
PMID:23676497, PMID:12086608, PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:5514106, RGD:12793054, RGD:13792537 NCBI chr 1:214,534,217...214,607,497
Ensembl chr 1:214,534,284...214,606,169
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:12086608), (PMID:23676497)
(MGI:5514106|PMID:23676497)
RGD PMID:12086608 PMID:23676497 MGI:5514106 NCBI chr10:70,516,462...70,621,973
Ensembl chr10:70,520,206...70,621,977
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IDA
ISO
IBA
PMID:12086608
(MGI:5514106|PMID:23676497)
PMID:21873635
(PMID:23676497)
RGD PMID:23676497, PMID:12086608, PMID:21873635 MGI:5514106, RGD:12793054, RGD:13792537 NCBI chr11:84,041,184...84,047,542
Ensembl chr11:84,041,184...84,047,546
JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IDA
ISO
(MGI:5882913|PMID:12086608) RGD PMID:12086608, PMID:7593184 MGI:5882913, RGD:2306270 NCBI chr 1:78,671,238...78,682,847
Ensembl chr 1:78,671,121...78,682,871
JBrowse link
G Btbd8 BTB domain containing 8 colocalizes_with
part_of
IDA
ISO
PMID:29262337
(MGI:6104538|PMID:29262337)
(PMID:29262337)
RGD PMID:29262337, PMID:29262337 MGI:6104538, RGD:13601995 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (MGI:4887327|PMID:17626015) RGD PMID:17626015 MGI:4887327 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein colocalizes_with
part_of
ISO
IEA
(PMID:16262731)
GO_REF:0000107
RGD
Ensembl
PMID:16262731 GO_REF:0000107 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of ISS
ISO
IEA
PMID:17626015
(MGI:4887327|PMID:17626015)
GO_REF:0000107
RGD
Ensembl
PMID:17626015, PMID:17626015 GO_REF:0000107 MGI:4887327, RGD:8554282 NCBI chr 5:122,300,415...122,498,478
Ensembl chr 5:122,390,522...122,491,203
JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14724281, PMID:21873635 RGD:2317430, RGD:13792537 NCBI chr16:8,682,668...8,685,529
Ensembl chr16:8,682,669...8,685,529
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 colocalizes_with ISO (PMID:24603492) RGD PMID:24603492 NCBI chr 9:1,144,641...1,747,732
Ensembl chr 9:1,145,700...1,746,397
JBrowse link
AP-3 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:143,284,041...143,315,846
Ensembl chr 1:143,283,996...143,315,633
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,838,639...11,873,992
Ensembl chr 7:11,838,639...11,873,984
JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 part_of ISO (PMID:9118953) RGD PMID:9118953 NCBI chr18:40,732,472...40,798,064
Ensembl chr18:40,732,480...40,797,761
JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 part_of ISO (PMID:9118953) RGD PMID:9118953 NCBI chr 1:141,612,961...141,655,417
Ensembl chr 1:141,612,963...141,655,894
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 8:48,677,492...48,692,295
Ensembl chr 8:48,677,492...48,692,295
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 3:122,947,887...122,969,543
Ensembl chr 3:122,947,913...122,969,541
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 3:111,097,352...111,108,206
Ensembl chr 3:111,097,326...111,108,295
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes colocalizes_with ISO (PMID:21411634) RGD PMID:21411634 NCBI chr12:38,459,816...38,482,903
Ensembl chr12:38,459,832...38,484,512
JBrowse link
G Vps39 VPS39 subunit of HOPS complex part_of ISO (MGI:5645203|PMID:21411634) RGD PMID:21411634 MGI:5645203 NCBI chr 3:112,087,213...112,125,307
Ensembl chr 3:112,087,677...112,125,318
JBrowse link
G Vps41 VPS41 subunit of HOPS complex colocalizes_with IDA
ISO
PMID:24210660
(PMID:21411634)
RGD PMID:21411634, PMID:24210660 RGD:10054072 NCBI chr17:48,643,754...48,810,633
Ensembl chr17:48,648,879...48,810,991
JBrowse link
AP-4 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of ISO (PMID:10066790) RGD PMID:10066790 NCBI chr 2:206,293,679...206,305,705
Ensembl chr 2:206,293,720...206,305,702
JBrowse link
G Ap4e1 adaptor related protein complex 4 subunit epsilon 1 part_of ISO
IBA
(PMID:10066790)
PMID:21873635
RGD PMID:10066790, PMID:21873635 RGD:13792537 NCBI chr 3:119,484,714...119,548,491
Ensembl chr 3:119,484,677...119,548,621
JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of ISO
ISS
(PMID:10066790), (PMID:11802162)
GO_REF:0000024
RGD
UniProt
PMID:10066790 PMID:11802162 GO_REF:0000024 NCBI chr12:19,314,222...19,320,339
Ensembl chr12:19,314,251...19,320,142
JBrowse link
G Ap4s1 adaptor related protein complex 4 subunit sigma 1 part_of ISO (PMID:10066790) RGD PMID:10066790 NCBI chr 6:72,461,977...72,502,717
Ensembl chr 6:72,461,977...72,503,847
JBrowse link
G Tepsin TEPSIN, adaptor related protein complex 4 accessory protein colocalizes_with IDA
ISO
PMID:22472443
(PMID:22472443), (PMID:26756312)
RGD PMID:22472443 PMID:26756312, PMID:22472443 RGD:11250428 NCBI chr10:109,271,161...109,278,745
Ensembl chr10:109,271,172...109,278,510
JBrowse link
AP-5 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07035428.1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr12:14,169,139...14,175,945 JBrowse link
G AABR07035428.2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr12:14,161,998...14,218,390 JBrowse link
AP-type membrane coat adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of TAS PMID:8262066 PINC PMID:8262066 RGD:2306271 NCBI chr10:70,516,462...70,621,973
Ensembl chr10:70,520,206...70,621,977
JBrowse link
G Ap5b1 adaptor related protein complex 5 subunit beta 1 part_of ISO
ISS
IBA
(PMID:22022230)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22022230, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:220,948,318...220,952,349
Ensembl chr 1:220,948,331...220,952,391
JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 part_of ISO
ISS
IBA
(PMID:22022230)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22022230, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:25,933,483...25,955,745
Ensembl chr15:25,933,483...25,955,745
JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 part_of IBA
ISO
PMID:21873635
(PMID:22022230)
RGD PMID:22022230, PMID:21873635 RGD:13792537 NCBI chr 3:123,754,035...123,757,349
Ensembl chr 3:123,754,057...123,757,359
JBrowse link
clathrin adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:85,230,652...85,281,806
Ensembl chr14:85,230,648...85,281,803
JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:19,288,354...19,303,818
Ensembl chr16:19,288,355...19,303,824
JBrowse link
G Ap1m2 adaptor related protein complex 1 subunit mu 2 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:22,318,941...22,336,827
Ensembl chr 8:22,319,331...22,336,794
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:8262066) RGD PMID:8262066 NCBI chr10:70,516,462...70,621,973
Ensembl chr10:70,520,206...70,621,977
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr11:84,041,184...84,047,542
Ensembl chr11:84,041,184...84,047,546
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 part_of IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr15:3,435,998...3,454,281
Ensembl chr15:3,436,361...3,454,279
JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 part_of IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr16:74,075,842...74,091,230
Ensembl chr16:74,076,812...74,091,139
JBrowse link
G Ap4b1 adaptor related protein complex 4 subunit beta 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:206,293,679...206,305,705
Ensembl chr 2:206,293,720...206,305,702
JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,314,222...19,320,339
Ensembl chr12:19,314,251...19,320,142
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 IDA RGD PMID:12564930 RGD:727577 NCBI chr 6:61,374,328...61,405,195
Ensembl chr 6:61,374,328...61,405,195
JBrowse link
clathrin coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 part_of IC PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr14:85,230,652...85,281,806
Ensembl chr14:85,230,648...85,281,803
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of IDA PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr10:70,516,462...70,621,973
Ensembl chr10:70,520,206...70,621,977
JBrowse link
G Clta clathrin, light chain A part_of IDA
ISO
(PMID:11756460) RGD PMID:11756460, PMID:1490999, PMID:17978091 RGD:2303177, RGD:2303184 NCBI chr 5:59,490,689...59,509,139
Ensembl chr 5:59,491,096...59,509,138
JBrowse link
G Cltb clathrin, light chain B IDA RGD PMID:1490999, PMID:17978091 RGD:2303177, RGD:2303184 NCBI chr17:10,537,348...10,554,999
Ensembl chr17:10,537,365...10,554,989
JBrowse link
G Cltc clathrin heavy chain part_of TAS
ISO
IDA
(PMID:11756460) RGD PMID:11756460, PMID:3480512, PMID:17978091, PMID:1490999 RGD:69810, RGD:2303184, RGD:2303177 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Igf2r insulin-like growth factor 2 receptor IDA RGD PMID:2971973 RGD:2303173 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477
JBrowse link
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 part_of ISO (PMID:24855057) RGD PMID:24855057 NCBI chr 9:27,565,869...28,141,114
Ensembl chr 9:27,562,959...27,761,733
JBrowse link
G Pank1 pantothenate kinase 1 part_of ISO (MGI:5484508|PMID:23152917) RGD PMID:23152917 MGI:5484508 NCBI chr 1:253,115,400...253,189,643
Ensembl chr 1:253,119,112...253,185,533
JBrowse link
clathrin coat of coated pit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of NAS
IEA
GO_REF:0000002 InterPro PMID:3563513 GO_REF:0000002, RGD:70686 NCBI chr 5:59,490,689...59,509,139
Ensembl chr 5:59,491,096...59,509,138
JBrowse link
G Cltb clathrin, light chain B part_of NAS PMID:3563513 RGD
UniProt
PMID:3563513, PMID:3563513 RGD:70686, RGD:70686 NCBI chr17:10,537,348...10,554,999
Ensembl chr17:10,537,365...10,554,989
JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Dab2 DAB adaptor protein 2 part_of ISO (MGI:5442517|PMID:11247302) RGD PMID:11247302 MGI:5442517 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of IBA
ISO
PMID:21873635
(MGI:5305417|PMID:18434600)
RGD PMID:18434600, PMID:21873635 MGI:5305417, RGD:13792537 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15-like 1 part_of IBA
ISO
PMID:21873635
(MGI:5305417|PMID:18434600)
RGD PMID:18434600, PMID:21873635 MGI:5305417, RGD:13792537 NCBI chr16:19,127,635...19,202,991
Ensembl chr16:19,127,724...19,203,003
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein colocalizes_with ISO (PMID:10436022), (PMID:16262731) RGD PMID:10436022 PMID:16262731 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Synj1 synaptojanin 1 part_of IDA PMID:9428629 ParkinsonsUK-UCL PMID:9428629 RGD:11059574 NCBI chr11:31,105,784...31,181,573
Ensembl chr11:31,104,787...31,180,642
JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epn2 epsin 2 part_of IDA
IEA
GO_REF:0000002 InterPro PMID:10567358 GO_REF:0000002, RGD:708327 NCBI chr10:47,795,496...47,857,373
Ensembl chr10:47,795,524...47,857,326
JBrowse link
clathrin coat of trans-Golgi network vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC105531.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:71,278,650...71,358,453 JBrowse link
G Clta clathrin, light chain A part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:59,490,689...59,509,139
Ensembl chr 5:59,491,096...59,509,138
JBrowse link
G Cltb clathrin, light chain B part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:10,537,348...10,554,999
Ensembl chr17:10,537,365...10,554,989
JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Dnm1l dynamin 1-like NOT|part_of IDA PMID:9472031 ParkinsonsUK-UCL PMID:9472031 RGD:11535088 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
G Synrg synergin, gamma part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10477754, PMID:21873635 RGD:631945, RGD:13792537 NCBI chr10:71,278,698...71,357,791 JBrowse link
clathrin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 part_of IDA PMID:11877461 UniProt PMID:11877461 RGD:8553925 NCBI chr 4:118,653,851...118,806,796
Ensembl chr 4:118,655,728...118,795,774
JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 part_of ISO (PMID:21401524) RGD PMID:21401524 NCBI chr 7:120,492,366...120,518,803
Ensembl chr 7:120,492,729...120,518,653
JBrowse link
G Clta clathrin, light chain A part_of ISO (PMID:4066749) RGD PMID:4066749 NCBI chr 5:59,490,689...59,509,139
Ensembl chr 5:59,491,096...59,509,138
JBrowse link
G Cltc clathrin heavy chain part_of ISO
IEA
IBA
(PMID:4066749)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:4066749, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Sclt1 sodium channel and clathrin linker 1 IDA RGD PMID:15797711 RGD:1359053 NCBI chr 2:128,523,376...128,675,668
Ensembl chr 2:128,523,636...128,675,408
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 IDA RGD PMID:15797711 RGD:1359053 NCBI chr 8:128,298,593...128,416,896
Ensembl chr 8:128,298,594...128,416,650
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes colocalizes_with ISO (PMID:21411634) RGD PMID:21411634 NCBI chr12:38,459,816...38,482,903
Ensembl chr12:38,459,832...38,484,512
JBrowse link
G Vps41 VPS41 subunit of HOPS complex colocalizes_with ISO (PMID:21411634) RGD PMID:21411634 NCBI chr17:48,643,754...48,810,633
Ensembl chr17:48,648,879...48,810,991
JBrowse link
clathrin vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clint1 clathrin interactor 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:30,833,914...31,007,813
Ensembl chr10:30,833,914...31,007,820
JBrowse link
G Clta clathrin, light chain A part_of NAS
IBA
PMID:21873635 RGD
GO_Central
PMID:3563513, PMID:21873635 RGD:70686, RGD:13792537 NCBI chr 5:59,490,689...59,509,139
Ensembl chr 5:59,491,096...59,509,138
JBrowse link
G Cltb clathrin, light chain B part_of NAS
IBA
PMID:3563513
PMID:21873635
RGD
UniProt
GO_Central
PMID:3563513, PMID:3563513, PMID:21873635 RGD:70686, RGD:70686, RGD:13792537 NCBI chr17:10,537,348...10,554,999
Ensembl chr17:10,537,365...10,554,989
JBrowse link
G Enthd1 ENTH domain containing 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:121,668,857...121,784,530
Ensembl chr 7:121,669,373...121,783,435
JBrowse link
G Epn1 Epsin 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:72,294,153...72,310,217
Ensembl chr 1:72,294,153...72,311,856
JBrowse link
G Epn2 epsin 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:47,795,496...47,857,373
Ensembl chr10:47,795,524...47,857,326
JBrowse link
G Epn3 epsin 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:82,220,762...82,231,200
Ensembl chr10:82,220,762...82,229,140
JBrowse link
G Necap1 NECAP endocytosis associated 1 part_of IBA
ISO
PMID:21873635
(MGI:3688370|PMID:14555962)
RGD PMID:14555962, PMID:21873635 MGI:3688370, RGD:13792537 NCBI chr 4:155,709,712...155,724,801
Ensembl chr 4:155,709,613...155,724,790
JBrowse link
G Necap2 NECAP endocytosis associated 2 part_of IBA
ISO
ISS
PMID:21873635
(MGI:3688370|PMID:14555962)
GO_REF:0000024
RGD
UniProt
PMID:14555962, PMID:21873635 GO_REF:0000024 MGI:3688370, RGD:13792537 NCBI chr 5:159,589,856...159,602,260
Ensembl chr 5:159,589,881...159,602,251
JBrowse link
COPI vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071244.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:106,586,689...106,602,837 JBrowse link
G Arcn1 archain 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:49,051,257...49,075,861
Ensembl chr 8:49,051,246...49,075,892
JBrowse link
G Copa COPI coat complex subunit alpha part_of IBA
ISO
PMID:21873635
(PMID:14729954)
RGD PMID:14729954, PMID:21873635 RGD:13792537 NCBI chr13:90,467,285...90,508,894
Ensembl chr13:90,467,265...90,508,932
JBrowse link
G Copb1 COPI coat complex subunit beta 1 part_of IDA
IBA
PMID:1840503
PMID:21873635
UniProt
GO_Central
PMID:1840503, PMID:21873635 RGD:632446, RGD:13792537 NCBI chr 1:183,695,480...183,729,569
Ensembl chr 1:183,695,481...183,729,569
JBrowse link
G Copb2 COPI coat complex subunit beta 2 part_of IBA
ISO
PMID:21873635
(PMID:14729954), (PMID:8335000)
RGD PMID:8335000 PMID:14729954, PMID:21873635 RGD:13792537 NCBI chr 8:106,582,339...106,603,763 JBrowse link
G Cope COPI coat complex subunit epsilon part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:20,863,141...20,873,516
Ensembl chr16:20,863,141...20,873,521
JBrowse link
G Copg1 COPI coat complex subunit gamma 1 part_of IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:119,815,041...119,840,997
Ensembl chr 4:119,815,139...119,864,114
JBrowse link
G Copg2 COPI coat complex subunit gamma 2 part_of IEA
ISO
IBA
GO_REF:0000107
(PMID:11056392), (PMID:14729954)
PMID:21873635
Ensembl
RGD
PMID:11056392 PMID:14729954, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:58,064,394...58,195,242
Ensembl chr 4:58,064,833...58,195,143
JBrowse link
G Copz1 COPI coat complex subunit zeta 1 part_of IBA
ISO
PMID:21873635
(PMID:11056392), (PMID:14729954)
RGD PMID:11056392 PMID:14729954, PMID:21873635 RGD:13792537 NCBI chr 7:144,900,050...144,926,299
Ensembl chr 7:144,899,534...144,926,350
JBrowse link
G Copz2 COPI coat complex subunit zeta 2 part_of IBA
ISO
PMID:21873635
(PMID:14729954)
RGD PMID:14729954, PMID:21873635 RGD:13792537 NCBI chr10:84,718,824...84,731,880
Ensembl chr10:84,718,824...84,731,880
JBrowse link
G Dipk2a divergent protein kinase domain 2A part_of IBA
ISO
PMID:21873635
(PMID:18651652)
RGD PMID:18651652, PMID:21873635 RGD:13792537 NCBI chr 8:102,140,713...102,159,828
Ensembl chr 8:102,088,505...102,159,828
JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:119,841,088...119,864,115
Ensembl chr 4:119,815,139...119,864,114
JBrowse link
G Scyl1 SCY1 like pseudokinase 1 part_of ISO (PMID:18556652)
(MGI:3847866|PMID:18556652)
RGD PMID:18556652 MGI:3847866 NCBI chr 1:221,115,992...221,129,668
Ensembl chr 1:221,115,860...221,129,654
JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 part_of IBA
IDA
PMID:21873635
PMID:15718469
GO_Central
UniProt
PMID:21873635, PMID:15718469 RGD:13792537, RGD:1599272 NCBI chr 8:97,075,194...97,083,107
Ensembl chr 8:97,075,160...97,083,120
JBrowse link
COPII vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07041481.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:131,381,134...131,382,011 JBrowse link
G Klhl12 kelch-like family member 12 part_of ISO
IEA
ISS
(PMID:27716508)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr13:51,280,933...51,314,753
Ensembl chr13:51,282,684...51,314,797
JBrowse link
G Pdcd6 programmed cell death 6 part_of ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 1:31,576,183...31,591,852
Ensembl chr 1:31,576,183...31,591,849
JBrowse link
G Pef1 penta-EF hand domain containing 1 part_of ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 5:148,320,610...148,343,876
Ensembl chr 5:148,320,438...148,343,886
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A part_of ISO (PMID:17499046) RGD PMID:17499046 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,215,989...37,245,603
Ensembl chr10:37,215,937...37,245,658
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of IBA
ISO
PMID:21873635
(PMID:17499046)
RGD PMID:17499046, PMID:21873635 RGD:13792537 NCBI chr 4:145,686,186...145,699,577
Ensembl chr 4:145,686,193...145,699,577
JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component part_of IBA
ISO
PMID:21873635
(PMID:17499046)
RGD PMID:17499046, PMID:21873635 RGD:13792537 NCBI chr 6:80,059,742...80,107,340
Ensembl chr 6:80,060,916...80,107,236
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,715,118...138,757,111
Ensembl chr 3:138,715,570...138,757,111
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component part_of IBA
ISO
PMID:21873635
(PMID:17499046)
RGD PMID:17499046, PMID:21873635 RGD:13792537 NCBI chr10:37,138,539...37,215,899
Ensembl chr10:37,139,806...37,215,899
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component part_of ISO
IBA
(PMID:10075675), (PMID:17499046)
(MGI:4438817|PMID:19966784)
PMID:21873635
RGD PMID:10075675 PMID:17499046 PMID:19966784, PMID:21873635 MGI:4438817, RGD:13792537 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component part_of IBA
ISO
PMID:21873635
(PMID:10075675), (PMID:10329445), (PMID:17499046)
RGD PMID:10075675 PMID:10329445 PMID:17499046, PMID:21873635 RGD:13792537 NCBI chr15:4,035,196...4,057,209
Ensembl chr15:4,035,196...4,057,157
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component part_of ISO
IBA
(PMID:17499046)
PMID:21873635
RGD PMID:17499046, PMID:21873635 RGD:13792537 NCBI chr 2:227,455,704...227,562,801
Ensembl chr 2:227,455,722...227,562,319
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:17499046), (PMID:27716508)
UniProt
Ensembl
RGD
PMID:17499046 PMID:27716508, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr14:10,854,713...10,909,579
Ensembl chr14:10,854,682...10,909,612
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,266,279...264,294,687
Ensembl chr 1:264,268,338...264,294,630
JBrowse link
vesicle coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec31a SEC31 homolog A, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr14:10,854,713...10,909,579
Ensembl chr14:10,854,682...10,909,612
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component part_of ISO (PMID:22792322) RGD PMID:22792322 NCBI chr 1:264,266,279...264,294,687
Ensembl chr 1:264,268,338...264,294,630
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20131
    cellular anatomical entity 19832
      cytoplasm 11415
        membrane coat 100
          AP-type membrane coat adaptor complex + 41
          clathrin coat + 48
          vesicle coat + 56
Path 2
Term Annotations click to browse term
  cellular_component 20131
    cellular anatomical entity 19832
      intracellular anatomical structure 14432
        cytoplasm 11415
          membrane coat 100
            AP-type membrane coat adaptor complex + 41
            clathrin coat + 48
            vesicle coat + 56
paths to the root