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ONTOLOGY REPORT - ANNOTATIONS

Term:central nervous system projection neuron axonogenesis
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Accession:GO:0021952 term browser browse the term
Definition:Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region.
Synonyms:narrow_synonym: central nervous system axon tract development

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central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550)		 MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443 		JBrowse link
G Dclk1 doublecortin like kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16387638) Ensembl
MGI		 PMID:16387638 GO_REF:0000107 NCBI chrNW_004936472:29,958,716...30,287,798
Ensembl chrNW_004936472:29,964,218...30,287,841 		JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16387638) Ensembl
MGI		 PMID:16387638 GO_REF:0000107 NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508 		JBrowse link
G Ephb1 EPH receptor B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chrNW_004936529:8,006,780...8,261,923
Ensembl chrNW_004936529:7,839,768...8,261,942 		JBrowse link
G Ephb2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106 		JBrowse link
G Ephb3 EPH receptor B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chrNW_004936578:5,286,580...5,297,369
Ensembl chrNW_004936578:5,287,340...5,298,142 		JBrowse link
G Kifbp kinesin family binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936521:9,395,490...9,421,093
Ensembl chrNW_004936521:9,395,465...9,421,629 		JBrowse link
G Mycbp2 MYC binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18031680) Ensembl
MGI		 PMID:18031680 GO_REF:0000107 NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10585298) Ensembl
MGI		 PMID:10585298 GO_REF:0000107 NCBI chrNW_004936469:21,912,118...21,920,486
Ensembl chrNW_004936469:21,912,047...21,920,486 		JBrowse link
G Prdm8 PR/SET domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22284184) Ensembl
MGI		 PMID:22284184 GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17197442) Ensembl
MGI
TreeGrafter		 PMID:17197442 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936661:2,831,132...2,903,619
Ensembl chrNW_004936661:2,827,572...2,903,655 		JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:561,822...571,817
Ensembl chrNW_004936474:561,822...571,622 		JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19398581) Ensembl
MGI		 PMID:19398581 GO_REF:0000107 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068 		JBrowse link
G Nfib nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11997145) Ensembl
MGI		 PMID:11997145 GO_REF:0000107 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486 		JBrowse link
G Plxna4 plexin A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814794) Ensembl
MGI		 PMID:15814794 GO_REF:0000107 NCBI chrNW_004936579:3,025,251...3,449,347
Ensembl chrNW_004936579:3,092,924...3,444,012 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21055390) Ensembl
MGI		 PMID:21055390 GO_REF:0000107 NCBI chrNW_004936498:5,434,912...5,487,354
Ensembl chrNW_004936498:5,434,911...5,447,147 		JBrowse link
G Wdr47 WD repeat domain 47 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29078390) Ensembl
MGI		 PMID:29078390 GO_REF:0000107 NCBI chrNW_004936704:543,189...603,488
Ensembl chrNW_004936704:543,196...603,488 		JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G CUNH12orf57 chromosome unknown C12orf57 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:884,741...886,617
Ensembl chrNW_004936709:884,741...886,895 		JBrowse link
G Nin ninein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25741725) Ensembl
MGI		 PMID:25741725 GO_REF:0000107 NCBI chrNW_004936495:14,791,246...14,897,454
Ensembl chrNW_004936495:14,791,216...14,897,449 		JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:8,612,142...8,693,698
Ensembl chrNW_004936538:8,612,049...8,694,015 		JBrowse link
G Prdm8 PR/SET domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22284184) Ensembl
MGI		 PMID:22284184 GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:24,788,175...24,837,471
Ensembl chrNW_004936474:24,788,195...24,837,395 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21055390) Ensembl
MGI		 PMID:21055390 GO_REF:0000107 NCBI chrNW_004936498:5,434,912...5,487,354
Ensembl chrNW_004936498:5,434,911...5,447,147 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:25741725) MGI PMID:25741725 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267 		JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18354028) Ensembl
MGI		 PMID:18354028 GO_REF:0000107 NCBI chrNW_004936570:1,187,916...1,195,423
Ensembl chrNW_004936570:1,186,711...1,195,388 		JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653 		JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Cdh11 cadherin 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22284184) Ensembl
MGI		 PMID:22284184 GO_REF:0000107 NCBI chrNW_004936475:15,513,402...15,662,330
Ensembl chrNW_004936475:15,511,804...15,662,330 		JBrowse link
G Epha4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348 		JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19398581) Ensembl
MGI		 PMID:19398581 GO_REF:0000107 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068 		JBrowse link
G Nin ninein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25741725) Ensembl
MGI		 PMID:25741725 GO_REF:0000107 NCBI chrNW_004936495:14,791,246...14,897,454
Ensembl chrNW_004936495:14,791,216...14,897,449 		JBrowse link
G Prdm8 PR/SET domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22284184) Ensembl
MGI		 PMID:22284184 GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (PMID:28237315) MGI PMID:28237315 NCBI chrNW_004936471:7,540,647...7,618,783 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:25741725) MGI PMID:25741725 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267 		JBrowse link
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase RNA specific B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20826656) Ensembl
MGI		 PMID:20826656 GO_REF:0000107 NCBI chrNW_004936778:1,056,259...1,137,772
Ensembl chrNW_004936778:1,053,871...1,137,828 		JBrowse link
G Dcc DCC netrin 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9126737) Ensembl
MGI		 PMID:9126737 GO_REF:0000107 NCBI chrNW_004936497:10,122,078...11,169,900
Ensembl chrNW_004936497:10,122,617...11,169,803 		JBrowse link
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10409510) Ensembl
MGI		 PMID:10409510 GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15975
    developmental process 6338
      anatomical structure morphogenesis 2773
        cell morphogenesis 1071
          cell morphogenesis involved in neuron differentiation 669
            axonogenesis 493
              central nervous system neuron axonogenesis 43
                central nervous system projection neuron axonogenesis 32
                  anterior commissure morphogenesis 8
                  corpus callosum morphogenesis 8
                  corticospinal tract morphogenesis + 10
                  cuneatus tract morphogenesis 0
                  gracilis tract morphogenesis 0
                  medulla reticulospinal tract morphogenesis 0
                  pons reticulospinal tract morphogenesis 0
                  posterior commissure morphogenesis 0
                  rubrospinal tract morphogenesis 0
                  spinal cord ventral commissure morphogenesis 3
                  spinothalamic tract morphogenesis 0
                  tectobulbar tract morphogenesis 0
                  tectospinal tract morphogenesis 0
                  trigeminothalamic tract morphogenesis 0
                  vestibulospinal tract morphogenesis 0
Path 2
Term Annotations click to browse term
  biological_process 15975
    developmental process 6338
      anatomical structure development 5971
        multicellular organism development 4846
          system development 4223
            nervous system development 2657
              neurogenesis 1986
                generation of neurons 1709
                  neuron differentiation 1629
                    neuron development 1348
                      neuron projection development 1187
                        axon development 569
                          axonogenesis 493
                            central nervous system neuron axonogenesis 43
                              central nervous system projection neuron axonogenesis 32
                                anterior commissure morphogenesis 8
                                corpus callosum morphogenesis 8
                                corticospinal tract morphogenesis + 10
                                cuneatus tract morphogenesis 0
                                gracilis tract morphogenesis 0
                                medulla reticulospinal tract morphogenesis 0
                                pons reticulospinal tract morphogenesis 0
                                posterior commissure morphogenesis 0
                                rubrospinal tract morphogenesis 0
                                spinal cord ventral commissure morphogenesis 3
                                spinothalamic tract morphogenesis 0
                                tectobulbar tract morphogenesis 0
                                tectospinal tract morphogenesis 0
                                trigeminothalamic tract morphogenesis 0
                                vestibulospinal tract morphogenesis 0
paths to the root