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ONTOLOGY REPORT - ANNOTATIONS


Term:axon development
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Accession:GO:0061564 term browser browse the term
Definition:The progression of an axon over time. Covers axonogenesis (de novo generation of an axon) and axon regeneration (regrowth), as well as processes pertaining to the progression of the axon over time (fasciculation and defasciculation).



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axon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap2 calmodulin regulated spectrin-associated protein family, member 2 involved_in ISO
IMP
(PMID:24908486) RGD PMID:24908486 PMID:24908486 RGD:13441206 NCBI chr13:47,723,121...47,802,597
Ensembl chr13:47,723,121...47,802,597
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1889152|PMID:10970885)
Ensembl
RGD
PMID:10970885 GO_REF:0000107 MGI:1889152 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 IDA RGD PMID:15992542 RGD:8553295 NCBI chr 1:46,887,017...46,893,956
Ensembl chr 1:46,887,017...46,893,881
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO MGI:5140703 (MGI:5013978|PMID:21632923) RGD PMID:21632923 MGI:5013978 NCBI chr 9:109,056,178...109,260,607
Ensembl chr 9:109,016,113...109,260,607
JBrowse link
G Grm7 glutamate metabotropic receptor 7 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:33500274)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:33500274 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:143,730,862...144,613,230
Ensembl chr 4:143,731,259...144,612,344
JBrowse link
G L1cam L1 cell adhesion molecule involved_in ISO
ISS
(PMID:20621658)
GO_REF:0000024
RGD
UniProt
PMID:20621658 GO_REF:0000024 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G LOC100912195 protein BEX1-like acts_upstream_of_or_within ISO MGI:96912 (MGI:4845807|PMID:20731761) RGD PMID:20731761 MGI:4845807 NCBI chr 1:110,047,861...110,051,812 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in IMP
ISO
PMID:25944905
(MGI:5502974|PMID:23576431), (MGI:6162406|PMID:25944905)
RGD PMID:23576431 PMID:25944905 PMID:25944905 PMID:23576431 MGI:5502974 MGI:6162406, RGD:13673780, RGD:13673742 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
JBrowse link
G Mark2 microtubule affinity regulating kinase 2 involved_in IMP PMID:16717194 ARUK-UCL PMID:16717194 RGD:13602002 NCBI chr 1:204,461,029...204,526,247
Ensembl chr 1:204,461,030...204,525,652
JBrowse link
G Nefh neurofilament heavy chain involved_in IEA
ISO
GO_REF:0000002
(MGI:2183394|PMID:9763431)
(PMID:7536898)
InterPro
RGD
PMID:7536898 PMID:9763431 GO_REF:0000002 MGI:2183394 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Plp1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1917997 (MGI:5511081|PMID:24038504)
RGD PMID:24038504 PMID:21873635 MGI:5511081, RGD:13792537 NCBI chr  X:100,184,039...100,201,035
Ensembl chr  X:100,185,767...100,201,032
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:2447704 (MGI:4436804|PMID:20071523) RGD PMID:20071523 MGI:4436804 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Slc25a46 solute carrier family 25, member 46 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314
JBrowse link
G Spry3 sprouty RTK signaling antagonist 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:16,663,188...16,673,124
Ensembl chr12:16,663,389...16,672,531
JBrowse link
G Svbp small vasohibin binding protein involved_in ISO
ISS
(PMID:31324789)
(MGI:6383353|PMID:31324789)
GO_REF:0000024
RGD
UniProt
PMID:31324789 GO_REF:0000024 MGI:6383353 NCBI chr 5:132,808,021...132,813,735
Ensembl chr 5:132,808,204...132,813,735
JBrowse link
G Tbc1d24 TBC1 domain family, member 24 acts_upstream_of_or_within ISO MGI:5692831 (MGI:6279048|PMID:30335140) RGD PMID:30335140 MGI:6279048 NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
JBrowse link
G Trim32 tripartite motif-containing 32 acts_upstream_of_or_within ISO MGI:3837468 (MGI:3836840|PMID:19155210) RGD PMID:19155210 MGI:3836840 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within ISO MGI:97623 (MGI:5511081|PMID:24038504) RGD PMID:24038504 MGI:5511081 NCBI chr 2:190,177,717...190,234,994
Ensembl chr 2:190,177,741...190,219,660
JBrowse link
G Vash2 vasohibin 2 involved_in ISO (PMID:31324789) RGD PMID:31324789 NCBI chr13:102,529,715...102,561,204
Ensembl chr13:102,529,719...102,560,391
JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO
IBA
(PMID:22422766)
(MGI:3575865|PMID:15767679), (MGI:3629480|PMID:16648254), (MGI:5424069|PMID:22422766)
PMID:21873635
RGD PMID:15767679 PMID:16648254 PMID:22422766 PMID:21873635 MGI:3575865 MGI:3629480 MGI:5424069, RGD:13792537 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:4440742 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:5467661|PMID:23206892) RGD PMID:23206892 MGI:5467661 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within ISO MGI:3849742 (MGI:3849342|PMID:19398581) RGD PMID:19398581 MGI:3849342 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:4453290|PMID:19961580)
UniProt
RGD
PMID:19961580 GO_REF:0000024 MGI:4453290 NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (MGI:2151063|PMID:11997145) RGD PMID:11997145 MGI:2151063 NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO MGI:3578655 (MGI:3578029|PMID:15814794) RGD PMID:15814794 MGI:3578029 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:4867728 (MGI:4848234|PMID:21055390)
(MGI:5467661|PMID:23206892)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21055390 PMID:23206892 GO_REF:0000024 GO_REF:0000107 MGI:4848234 MGI:5467661 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
anterior/posterior axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcc DCC netrin 1 receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807817|PMID:18479186)
Ensembl
RGD
PMID:18479186 GO_REF:0000107 MGI:3807817 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
JBrowse link
G Ntn1 netrin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807817|PMID:18479186)
Ensembl
RGD
PMID:18479186 GO_REF:0000107 MGI:3807817 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Unc5a unc-5 netrin receptor A involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:3807817|PMID:18479186)
GO_REF:0000107
RGD
Ensembl
PMID:18479186 PMID:21873635 GO_REF:0000107 MGI:3807817, RGD:13792537 NCBI chr17:9,614,841...9,670,558
Ensembl chr17:9,614,838...9,670,526
JBrowse link
G Unc5b unc-5 netrin receptor B involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:3807817|PMID:18479186)
GO_REF:0000107
RGD
Ensembl
PMID:18479186 PMID:21873635 GO_REF:0000107 MGI:3807817, RGD:13792537 NCBI chr20:28,697,726...28,764,474
Ensembl chr20:28,697,726...28,764,537
JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within ISO (MGI:3807817|PMID:18479186) RGD PMID:18479186 MGI:3807817 NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
JBrowse link
axon choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 acts_upstream_of_or_within ISO MGI:3026700 (MGI:3026699|PMID:11182083) RGD PMID:11182083 MGI:3026699 NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
JBrowse link
G Gap43 growth associated protein 43 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2448337 (MGI:70834|PMID:7859286)
RGD PMID:7859286 PMID:21873635 MGI:70834, RGD:13792537 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
JBrowse link
axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 involved_in ISO (MGI:5908783|PMID:25533347) RGD PMID:25533347 MGI:5908783
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:5515840|PMID:24035762) RGD PMID:24035762 MGI:5515840 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in TAS PMID:11276227 UniProt PMID:11276227 RGD:8554712 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in TAS PMID:11276227 UniProt PMID:11276227 RGD:8554712 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 involved_in ISO (PMID:16260607) RGD PMID:16260607 NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within ISO MGI:1277171 (MGI:3614628|PMID:16387638) RGD PMID:16387638 MGI:3614628 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1330861 (MGI:3614628|PMID:16387638)
Ensembl
RGD
PMID:16387638 GO_REF:0000107 MGI:3614628 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Edn1 endothelin 1 involved_in ISO (MGI:3784120|PMID:18401410) RGD PMID:18401410 MGI:3784120 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 involved_in ISO
IEA
(MGI:3784120|PMID:18401410)
GO_REF:0000107
RGD
Ensembl
PMID:18401410 GO_REF:0000107 MGI:3784120 NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Edn3 endothelin 3 involved_in ISO (MGI:3784120|PMID:18401410) RGD PMID:18401410 MGI:3784120 NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
JBrowse link
G Ednra endothelin receptor type A involved_in ISO
IEA
(MGI:3784120|PMID:18401410)
GO_REF:0000107
RGD
Ensembl
PMID:18401410 GO_REF:0000107 MGI:3784120 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (MGI:6148478|PMID:24286867) RGD PMID:24286867 MGI:6148478 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (MGI:6148478|PMID:24286867) RGD PMID:24286867 MGI:6148478 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1306826 (MGI:2683853|PMID:12879062)
Ensembl
RGD
PMID:12879062 GO_REF:0000107 MGI:2683853 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5303045|PMID:21857657)
Ensembl
RGD
PMID:21857657 GO_REF:0000107 MGI:5303045 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Map1b microtubule-associated protein 1B acts_upstream_of_or_within ISO MGI:2148182 (MGI:3694279|PMID:16536727) RGD PMID:16536727 MGI:3694279 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
JBrowse link
G Mapt microtubule-associated protein tau acts_upstream_of_or_within ISO MGI:2385630 (MGI:3614337|PMID:11891784), (MGI:3694279|PMID:16536727), (MGI:4454362|PMID:20338169) RGD PMID:11891784 PMID:16536727 PMID:20338169 MGI:3614337 MGI:3694279 MGI:4454362 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Mir124-1 microRNA 124-1 acts_upstream_of_or_within ISO MGI:3618700 (MGI:5303045|PMID:21857657) RGD PMID:21857657 MGI:5303045 NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
JBrowse link
G Mir124-2 microRNA 124-2 acts_upstream_of_or_within ISO MGI:2676807 (MGI:5303045|PMID:21857657) RGD PMID:21857657 MGI:5303045 NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:2653048 (MGI:3582873|PMID:15972963) RGD PMID:15972963 MGI:3582873 NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
JBrowse link
G Nlgn3 neuroligin 3 involved_in IMP PMID:19406211 BHF-UCL PMID:19406211 RGD:8554851 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO MGI:102523 (MGI:2156641|PMID:11807038) RGD PMID:11807038 MGI:2156641 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:102524 (MGI:2156641|PMID:11807038) RGD PMID:11807038 MGI:2156641 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
JBrowse link
G Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 acts_upstream_of_or_within ISO (MGI:4462113|PMID:20417104) RGD PMID:20417104 MGI:4462113 NCBI chr 9:61,907,476...61,990,170
Ensembl chr 9:61,907,758...61,961,209
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5818605|PMID:27723745)
GO_REF:0000024
(PMID:27723745)
Ensembl
RGD
UniProt
PMID:27723745 GO_REF:0000024 GO_REF:0000107 MGI:5818605 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G Sema5a semaphorin 5A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:107555 (MGI:5140622|PMID:21835343)
RGD PMID:21835343 PMID:21873635 MGI:5140622, RGD:13792537 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
JBrowse link
G Sema5b semaphorin 5B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:107556 (MGI:5140622|PMID:21835343)
RGD PMID:21835343 PMID:21873635 MGI:5140622, RGD:13792537 NCBI chr11:65,102,031...65,225,456
Ensembl chr11:65,102,031...65,225,311
JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) acts_upstream_of_or_within ISO MGI:2683867|MGI:96610 (MGI:2683853|PMID:12879062) RGD PMID:12879062 MGI:2683853 NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
JBrowse link
G Slc9a6 solute carrier family 9 member A6 acts_upstream_of_or_within ISO (PMID:24035762) RGD PMID:24035762 NCBI chr  X:134,430,588...134,486,747
Ensembl chr  X:134,420,756...134,485,375
JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5585364|PMID:24794856)
RGD PMID:24794856 PMID:21873635 MGI:5585364, RGD:13792537 NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3706258|PMID:17389358)
PMID:21873635
RGD PMID:17389358 PMID:21873635 MGI:3706258, RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3706258|PMID:17389358)
PMID:21873635
RGD PMID:17389358 PMID:21873635 MGI:3706258, RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in
acts_upstream_of_or_within
ISO (PMID:24607389)
MGI:5438072 (MGI:5532214|PMID:23861879)
(MGI:5574428|PMID:24607389)
RGD PMID:23861879 PMID:24607389 MGI:5532214 MGI:5574428 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
G Vcl vinculin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:106658|MGI:1861437 (MGI:5568171|PMID:24623780)
Ensembl
RGD
PMID:24623780 GO_REF:0000107 MGI:5568171 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link
axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alcam activated leukocyte cell adhesion molecule involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Nrp2 neuropilin 2 involved_in ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISO
IEA
(PMID:16840550)
GO_REF:0000107
RGD
Ensembl
PMID:16840550 GO_REF:0000107 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:16840550) RGD PMID:16840550 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slit3 slit guidance ligand 3 involved_in ISO
IEA
(PMID:16840550)
GO_REF:0000107
RGD
Ensembl
PMID:16840550 GO_REF:0000107 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
JBrowse link
G Smo smoothened, frizzled class receptor IMP RGD PMID:19447091 RGD:2324988 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856026 (MGI:1101275|PMID:9396756)
Ensembl
RGD
PMID:9396756 GO_REF:0000107 MGI:1101275 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ablim1 actin-binding LIM protein 1 acts_upstream_of_or_within ISO (MGI:1928568|PMID:11163266) RGD PMID:11163266 MGI:1928568 NCBI chr 1:256,084,293...256,372,075
Ensembl chr 1:256,084,297...256,371,969
JBrowse link
G Alcam activated leukocyte cell adhesion molecule acts_upstream_of_or_within ISO MGI:3056579 (MGI:3056232|PMID:15345243) RGD PMID:15345243 MGI:3056232 NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
JBrowse link
G Ank3 ankyrin 3 acts_upstream_of_or_within ISO MGI:2179751 (MGI:3510083|PMID:15479642) RGD PMID:15479642 MGI:3510083 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO MGI:108405 (MGI:3614238|PMID:16407979) RGD PMID:16407979 MGI:3614238 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within ISO MGI:107765 (MGI:3614238|PMID:16407979) RGD PMID:16407979 MGI:3614238 NCBI chr14:41,557,918...41,878,622
Ensembl chr14:41,557,972...41,877,495
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO
GO_REF:0000024
(MGI:1933687|PMID:11283609)
UniProt
RGD
PMID:11283609 GO_REF:0000024 MGI:1933687 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
JBrowse link
G Arhgef25 Rho guanine nucleotide exchange factor 25 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:63,005,938...63,013,325
Ensembl chr 7:63,005,940...63,013,719
JBrowse link
G Artn artemin acts_upstream_of_or_within ISO MGI:2183554 (MGI:2183092|PMID:12160745) RGD PMID:12160745 MGI:2183092 NCBI chr 5:131,458,596...131,470,193
Ensembl chr 5:131,464,756...131,468,025
JBrowse link
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679972 (MGI:3574008|PMID:15677725), (MGI:3709215|PMID:17460091)
Ensembl
RGD
PMID:15677725 PMID:17460091 GO_REF:0000107 MGI:3574008 MGI:3709215 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155984 (MGI:3607238|PMID:16145671) RGD PMID:16145671 MGI:3607238 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 acts_upstream_of_or_within ISO MGI:3576265 (MGI:3575344|PMID:15728829), (MGI:5528450|PMID:23006775) RGD PMID:15728829 PMID:23006775 MGI:3575344 MGI:5528450 NCBI chr14:96,808,473...96,833,674
Ensembl chr14:96,806,664...96,835,273
JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:5470461 (MGI:5470500|PMID:23217742) RGD PMID:23217742 MGI:5470500 NCBI chr 1:202,343,268...202,345,490
Ensembl chr 1:202,343,240...202,346,065
JBrowse link
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO MGI:1929986 (MGI:3629534|PMID:15014133) RGD PMID:15014133 MGI:3629534 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:2662055|PMID:12741987) RGD PMID:12741987 MGI:2662055 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Boc BOC cell adhesion associated, oncogene regulated acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3692939 (MGI:3691957|PMID:17086203)
PMID:21873635
RGD PMID:17086203 PMID:21873635 MGI:3691957, RGD:13792537 NCBI chr11:56,122,697...56,198,060
Ensembl chr11:56,122,750...56,198,059
JBrowse link
G Bsg basigin (Ok blood group) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:61,948,614...62,109,968
Ensembl chr 3:61,948,646...62,110,079
JBrowse link
G Cdh4 cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2679739|PMID:14586016)
Ensembl
RGD
PMID:14586016 GO_REF:0000107 MGI:2679739 NCBI chr 3:166,525,098...167,003,380
Ensembl chr 3:166,525,099...167,003,371
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1347398|PMID:10545161)
UniProt
RGD
PMID:10545161 GO_REF:0000024 MGI:1347398 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Chl1 cell adhesion molecule L1-like acts_upstream_of_or_within ISO MGI:2429688 (MGI:2389546|PMID:12391163) RGD PMID:12391163 MGI:2389546 NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
JBrowse link
G Cntn1 contactin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541
JBrowse link
G Cntn2 contactin 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:107558|MGI:2677610|MGI:96721 (MGI:3801368|PMID:18550718)
Ensembl
RGD
PMID:18550718 PMID:21873635 GO_REF:0000107 MGI:3801368, RGD:13792537 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
JBrowse link
G Cntn4 contactin 4 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090
JBrowse link
G Cntn5 contactin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:6,735,715...7,967,727
Ensembl chr 8:6,738,239...7,967,957
JBrowse link
G Crmp1 collapsin response mediator protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:73,509,933...73,556,192
Ensembl chr14:73,509,933...73,556,177
JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A acts_upstream_of_or_within ISO MGI:5470460 (MGI:5470500|PMID:23217742) RGD PMID:23217742 MGI:5470500 NCBI chr 6:53,120,264...53,397,030
Ensembl chr 6:53,121,438...53,397,028
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO
GO_REF:0000107
(MGI:5430247|PMID:22542597)
Ensembl
RGD
PMID:22542597 GO_REF:0000107 MGI:5430247 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
JBrowse link
G Dag1 dystroglycan 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Dcc DCC netrin 1 receptor involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:8861902 PMID:21873635 RGD:729062, RGD:13792537 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO MGI:2180475 (MGI:3722740|PMID:17804636) RGD PMID:17804636 MGI:3722740 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
JBrowse link
G Dpysl5 dihydropyrimidinase-like 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:25,575,104...25,659,422
Ensembl chr 6:25,575,104...25,659,422
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IBA
ISO
PMID:21873635
(MGI:3832346|PMID:19150847)
RGD PMID:19150847 PMID:21873635 MGI:3832346, RGD:13792537 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
JBrowse link
G Drgx dorsal root ganglia homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182636 (MGI:2670488|PMID:12917357)
Ensembl
RGD
PMID:12917357 GO_REF:0000107 MGI:2670488 NCBI chr16:7,854,849...7,884,404
Ensembl chr16:7,854,849...7,900,600
JBrowse link
G Dscam DS cell adhesion molecule involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000002
UniProtKB:O08747 (MGI:6274971|PMID:22685302)
PMID:21873635
UniProt
InterPro
RGD
PMID:22685302 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:6274971, RGD:13792537 NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:45,740,298...46,057,322
Ensembl chr 8:45,740,298...46,057,320
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Edn3 endothelin 3 involved_in ISO MGI:1857160 (MGI:3784120|PMID:18401410) RGD PMID:18401410 MGI:3784120 NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
JBrowse link
G Ednra endothelin receptor type A involved_in ISO MGI:1857473 (MGI:3784120|PMID:18401410) RGD PMID:18401410 MGI:3784120 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Efna1 ephrin A1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
JBrowse link
G Efna2 ephrin A2 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:17328773 PMID:21873635 RGD:2301727, RGD:13792537 NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061
JBrowse link
G Efna3 ephrin A3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,729,192...174,738,111
Ensembl chr 2:174,729,764...174,738,736
JBrowse link
G Efna4 ephrin A4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,748,729...174,752,979
Ensembl chr 2:174,748,724...174,752,979
JBrowse link
G Efna5 ephrin A5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2429768 (MGI:1261388|PMID:9614241), (MGI:1931133|PMID:11222144)
RGD PMID:9614241 PMID:11222144 PMID:21873635 MGI:1261388 MGI:1931133, RGD:13792537 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Efnb1 ephrin B1 acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
IBA
(MGI:2153438|PMID:11731465)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:11731465 PMID:12139920 PMID:21873635 GO_REF:0000107 MGI:2153438, RGD:727396, RGD:13792537 NCBI chr  X:64,257,351...64,270,158
Ensembl chr  X:64,257,351...64,270,157
JBrowse link
G Efnb2 ephrin B2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
JBrowse link
G Efnb3 ephrin B3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2388046 (MGI:2153438|PMID:11731465), (MGI:2653388|PMID:12649481)
RGD PMID:11731465 PMID:12649481 PMID:21873635 MGI:2153438 MGI:2653388, RGD:13792537 NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
JBrowse link
G Emb embigin involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:49,070,509...49,125,042
Ensembl chr 2:49,069,087...49,125,050
JBrowse link
G Enah ENAH, actin regulator involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:109268|MGI:3056050 (MGI:1331576|PMID:10069337), (MGI:3054149|PMID:15371503)
RGD PMID:10069337 PMID:15371503 PMID:21873635 MGI:1331576 MGI:3054149, RGD:13792537 NCBI chr13:93,617,751...93,738,119
Ensembl chr13:93,626,944...93,740,955
JBrowse link
G Epha1 Eph receptor A1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:71,246,409...71,260,920
Ensembl chr 4:71,246,409...71,260,846
JBrowse link
G Epha10 EPH receptor A10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:137,139,588...137,175,637
Ensembl chr 5:137,140,735...137,174,157
JBrowse link
G Epha2 Eph receptor A2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
JBrowse link
G Epha3 Eph receptor A3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Epha4 Eph receptor A4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2654411|MGI:2679336 (MGI:2653388|PMID:12649481), (MGI:5464968|PMID:23144223)
RGD PMID:12649481 PMID:23144223 PMID:21873635 MGI:2653388 MGI:5464968, RGD:13792537 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Epha5 EPH receptor A5 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:2384261|PMID:12124402)
PMID:21873635
UniProt
RGD
PMID:12124402 PMID:21873635 GO_REF:0000024 MGI:2384261, RGD:13792537 NCBI chr14:23,653,393...24,020,135
Ensembl chr14:23,653,393...24,017,317
JBrowse link
G Epha6 Eph receptor A6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:39,757,870...40,708,901
Ensembl chr11:39,757,181...40,698,311
JBrowse link
G Epha7 Eph receptor A7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
JBrowse link
G Epha8 Eph receptor A8 involved_in IEA
ISO
ISS
IBA
GO_REF:0000107
(MGI:892883|PMID:9214628)
GO_REF:0000024
PMID:21873635
Ensembl
RGD
UniProt
PMID:9214628 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:892883, RGD:13792537 NCBI chr 5:149,166,107...149,193,498
Ensembl chr 5:149,166,697...149,193,399
JBrowse link
G Ephb1 Eph receptor B1 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:2677305|MGI:2677312 (MGI:2149059|PMID:11532925), (MGI:2675767|PMID:12971893), (MGI:3716012|PMID:16701205), (MGI:5604297|PMID:24997765)
PMID:21873635
UniProt
RGD
PMID:11532925 PMID:12971893 PMID:16701205 PMID:24997765 PMID:21873635 GO_REF:0000024 MGI:2149059 MGI:2675767 MGI:3716012 MGI:5604297, RGD:13792537 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Ephb2 Eph receptor B2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1859095|PMID:10839360), (MGI:84499|PMID:8947026)
(MGI:2149059|PMID:11532925)
RGD PMID:8947026 PMID:10839360 PMID:11532925 PMID:21873635 MGI:1859095 MGI:2149059 MGI:84499, RGD:13792537 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1859095|PMID:10839360), (MGI:84499|PMID:8947026)
(MGI:2149059|PMID:11532925)
RGD PMID:8947026 PMID:10839360 PMID:11532925 PMID:21873635 MGI:1859095 MGI:2149059 MGI:84499, RGD:13792537 NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Ephb4 EPH receptor B4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,326,411...19,351,667
Ensembl chr12:19,326,427...19,351,314
JBrowse link
G Ephb6 Eph receptor B6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:70,491,973...70,507,230
Ensembl chr 4:70,491,973...70,507,230
JBrowse link
G Etv1 ETS variant transcription factor 1 acts_upstream_of_or_within ISO MGI:2384493|MGI:2384496 (MGI:2183841|PMID:10850491) RGD PMID:10850491 MGI:2183841 NCBI chr 6:55,590,149...55,681,784
Ensembl chr 6:55,590,234...55,681,775
JBrowse link
G Evl Enah/Vasp-like involved_in NAS PMID:9268706 UniProt PMID:9268706 RGD:728214 NCBI chr 6:127,473,119...127,594,342
Ensembl chr 6:127,474,543...127,594,344
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO MGI:1315205|MGI:2176173|MGI:2682061 (MGI:2679928|PMID:14605369), (MGI:5311271|PMID:21743013) RGD PMID:14605369 PMID:21743013 MGI:2679928 MGI:5311271 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO (MGI:3621093|PMID:16540508) RGD PMID:16540508 MGI:3621093 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO MGI:2389364 (MGI:5486433|PMID:21673655) RGD PMID:21673655 MGI:5486433 NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
ISO
IGI
(MGI:5688822|PMID:24560577)
PMID:21673655
RGD PMID:24560577 PMID:21673655 MGI:5688822, RGD:8554719 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
JBrowse link
G Foxd1 forkhead box D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180362 (MGI:3512698|PMID:15509772)
Ensembl
RGD
PMID:15509772 GO_REF:0000107 MGI:3512698 NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO MGI:2448337 (MGI:1353240|PMID:10662636) RGD PMID:10662636 MGI:1353240 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070 (MGI:3710451|PMID:17504941) RGD PMID:17504941 MGI:3710451 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2181200 (MGI:1928163|PMID:11135239) RGD PMID:11135239 MGI:1928163 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:2179161|PMID:11967891) RGD PMID:11967891 MGI:2179161 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO (MGI:2662801|PMID:12639970) RGD PMID:12639970 MGI:2662801 NCBI chr 6:31,171,495...31,182,447
Ensembl chr 6:31,178,119...31,182,447
JBrowse link
G Gfra3 GDNF family receptor alpha 3 acts_upstream_of_or_within ISO MGI:2136781|MGI:2183558 (MGI:1344239|PMID:10482239), (MGI:2183092|PMID:12160745) RGD PMID:10482239 PMID:12160745 MGI:1344239 MGI:2183092 NCBI chr18:26,297,828...26,326,105
Ensembl chr18:26,297,829...26,326,105
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (MGI:1340208|PMID:10409510) RGD PMID:10409510 MGI:1340208 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:1856282 (MGI:3628676|PMID:15065125), (MGI:4837563|PMID:20943929) RGD PMID:15065125 PMID:20943929 MGI:3628676 MGI:4837563 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Kif5a kinesin family member 5A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Kif5b kinesin family member 5B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:51,489,873...51,527,508
Ensembl chr17:51,489,944...51,527,508
JBrowse link
G Kif5c kinesin family member 5C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
JBrowse link
G Klf7 Kruppel like factor 7 acts_upstream_of_or_within ISO MGI:3581890 (MGI:3581378|PMID:15964824) RGD PMID:15964824 MGI:3581378 NCBI chr 9:65,433,683...65,526,372
NCBI chr 9:65,437,535...65,484,720
Ensembl chr 9:65,437,167...65,526,261
JBrowse link
G L1cam L1 cell adhesion molecule involved_in
acts_upstream_of_or_within
ISO
IEA
ISS
(PMID:24155914)
MGI:104518|MGI:107558|MGI:1857443 (MGI:2449891|PMID:12533613), (MGI:3801368|PMID:18550718), (MGI:3804601|PMID:18650339)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12533613 PMID:18550718 PMID:18650339 PMID:24155914 GO_REF:0000024 GO_REF:0000107 MGI:2449891 MGI:3801368 MGI:3804601 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G Lama1 laminin subunit alpha 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Lama2 laminin subunit alpha 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:109613 (MGI:3850905|PMID:19295126)
RGD PMID:19295126 PMID:21873635 MGI:3850905, RGD:13792537 NCBI chr 1:17,672,675...18,320,641
Ensembl chr 1:17,672,536...18,320,530
JBrowse link
G Lama3 laminin subunit alpha 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353
JBrowse link
G Lama5 laminin subunit alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
JBrowse link
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:109613 (MGI:3850905|PMID:19295126)
Ensembl
RGD
PMID:19295126 GO_REF:0000107 MGI:3850905 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
G Lgi1 leucine-rich, glioma inactivated 1 involved_in ISO (PMID:20463223) RGD PMID:20463223 NCBI chr 1:236,043,376...236,084,270
Ensembl chr 1:236,042,954...236,084,616
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
JBrowse link
G Lgr6 leucine-rich repeat-containing G protein-coupled receptor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,424,382...46,544,074
Ensembl chr13:46,424,383...46,543,945
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5319439|PMID:22457488)
MGI:1890208 (MGI:3714686|PMID:17493606)
Ensembl
RGD
PMID:17493606 PMID:22457488 GO_REF:0000107 MGI:3714686 MGI:5319439 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (MGI:3051929|PMID:15183721) RGD PMID:15183721 MGI:3051929 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
JBrowse link
G LOC100912306 myotilin-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC103692570 dihydropyrimidinase-related protein 5-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Lrtm1 leucine-rich repeats and transmembrane domains 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:4,210,343...4,217,843 JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,485,863...152,508,248
Ensembl chr 4:152,485,866...152,500,377
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within ISO MGI:3527900 (MGI:3527288|PMID:15572149) RGD PMID:15572149 MGI:3527288 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
JBrowse link
G Matn2 matrilin 2 acts_upstream_of_or_within ISO MGI:99912|MGI:99916 (MGI:3850905|PMID:19295126) RGD PMID:19295126 MGI:3850905 NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445 (MGI:3581503|PMID:15880105) RGD PMID:15880105 MGI:3581503 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Myot myotilin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:36,705,244...36,724,849
Ensembl chr18:36,705,314...36,724,841
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:15328010 RGD:1599806 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
JBrowse link
G Neo1 neogenin 1 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO MGI:2159010 (MGI:2670323|PMID:12895419), (MGI:3056020|PMID:15328020) RGD PMID:12895419 PMID:15328020 MGI:2670323 MGI:3056020 NCBI chr 2:216,092,641...216,095,276
Ensembl chr 2:216,093,363...216,094,154
JBrowse link
G Nexn nexilin (F actin binding protein) involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:241,186,783...241,218,315
Ensembl chr 2:241,186,790...241,218,342
JBrowse link
G Nfasc neurofascin involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000002
PMID:21873635
(MGI:3510083|PMID:15479642)
InterPro
RGD
PMID:15479642 PMID:21873635 GO_REF:0000002 MGI:3510083, RGD:13792537 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880
JBrowse link
G Ngfr nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857226 (MGI:2178912|PMID:11978834)
Ensembl
RGD
PMID:11978834 GO_REF:0000107 MGI:2178912 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857494 (MGI:2157787|PMID:11830575)
Ensembl
RGD
PMID:11830575 GO_REF:0000107 MGI:2157787 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (MGI:3653290|PMID:12435358) RGD PMID:12435358 MGI:3653290 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Notch3 notch receptor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
JBrowse link
G Nptn neuroplastin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,996,876...59,063,402
Ensembl chr 8:58,996,887...59,063,401
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:3056852|PMID:15456880) RGD PMID:15456880 MGI:3056852 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA
ISO
IBA
GO_REF:0000002
(MGI:2447374|PMID:12182881)
PMID:21873635
InterPro
RGD
PMID:12182881 PMID:21873635 GO_REF:0000002 MGI:2447374, RGD:13792537 NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within ISO MGI:1857853|MGI:3512099 (MGI:3505728|PMID:12852851), (MGI:3525900|PMID:15604101), (MGI:3578029|PMID:15814794) RGD PMID:12852851 PMID:15604101 PMID:15814794 MGI:3505728 MGI:3525900 MGI:3578029 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Nrp2 neuropilin 2 acts_upstream_of_or_within IEP
ISO
(MGI:3578029|PMID:15814794) RGD PMID:15814794 PMID:9288754 MGI:3578029, RGD:633436 NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO MGI:1933844 (MGI:3576404|PMID:15550985), (MGI:80051|PMID:8861722) RGD PMID:8861722 PMID:15550985 MGI:3576404 MGI:80051 NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within NAS
ISO
MGI:1927548 (MGI:1861288|PMID:10908620), (MGI:2181259|PMID:12051827), (MGI:2654974|PMID:12679031), (MGI:3616408|PMID:16481423), (MGI:3691957|PMID:17086203), (MGI:3758130|PMID:17898206) RGD PMID:10908620 PMID:12051827 PMID:12679031 PMID:16481423 PMID:17086203 More... MGI:1861288 MGI:2181259 MGI:2654974 MGI:3616408 MGI:3691957 MGI:3758130, RGD:633501 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Ntn3 netrin 3 NAS RGD PMID:11356879 RGD:633501 NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:18344912 RGD:5684394 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Olr1194 olfactory receptor 1194 acts_upstream_of_or_within ISO MGI:1923510 (MGI:5014119|PMID:21646512) RGD PMID:21646512 MGI:5014119 NCBI chr 8:37,434,903...37,435,832
Ensembl chr 8:37,434,551...37,439,746
JBrowse link
G Olr231 olfactory receptor 231 acts_upstream_of_or_within ISO MGI:1923510 (MGI:5014119|PMID:21646512) RGD PMID:21646512 MGI:5014119 NCBI chr 1:160,957,099...160,958,046
Ensembl chr 1:160,953,530...160,958,974
JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in ISO
IEA
(PMID:16267555)
GO_REF:0000107
RGD
Ensembl
PMID:16267555 GO_REF:0000107 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
JBrowse link
G Palld palladin, cytoskeletal associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856158 (MGI:2179161|PMID:11967891), (MGI:2679739|PMID:14586016)
Ensembl
RGD
PMID:11967891 PMID:14586016 GO_REF:0000107 MGI:2179161 MGI:2679739 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pgrmc1 progesterone receptor membrane component 1 IEP RGD PMID:10656251 RGD:727289 NCBI chr  X:115,832,865...115,841,060
Ensembl chr  X:115,832,884...115,888,682
JBrowse link
G Pla2g10 phospholipase A2, group X acts_upstream_of_or_within ISO (PMID:15927955) RGD PMID:15927955 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO MGI:2386961 (MGI:2152659|PMID:11683995) RGD PMID:11683995 MGI:2152659 NCBI chr  X:152,115,699...152,131,608
Ensembl chr  X:152,115,819...152,131,603
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO MGI:3578655 (MGI:3578029|PMID:15814794) RGD PMID:15814794 MGI:3578029 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO MGI:3582493 (MGI:1928568|PMID:11163266) RGD PMID:11163266 MGI:1928568 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Prtg protogenin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:73,548,440...73,657,945
Ensembl chr 8:73,548,466...73,653,259
JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5306568|PMID:19800005)
PMID:21873635
UniProt
RGD
PMID:19800005 PMID:21873635 GO_REF:0000024 MGI:5306568, RGD:13792537 NCBI chr 4:170,164,071...170,374,790
Ensembl chr 4:170,164,431...170,374,771
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (MGI:3709518|PMID:17409253) RGD PMID:17409253 MGI:3709518 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:1856398 (MGI:3611655|PMID:16324103)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16324103 GO_REF:0000024 GO_REF:0000107 MGI:3611655 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Robo1 roundabout guidance receptor 1 acts_upstream_of_or_within IDA
ISO
MGI:3043142 (MGI:3040153|PMID:15084255), (MGI:3041390|PMID:15091338) RGD PMID:15084255 PMID:15091338 PMID:9458045 MGI:3040153 MGI:3041390, RGD:61733 NCBI chr11:10,580,863...11,621,672
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Robo2 roundabout guidance receptor 2 acts_upstream_of_or_within IDA
ISO
MGI:3043127 (MGI:3041390|PMID:15091338) RGD PMID:15091338 PMID:10102268 MGI:3041390, RGD:68763 NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within
involved_in
ISO MGI:1274781|MGI:3043150 (MGI:3040153|PMID:15084255), (MGI:3047174|PMID:15233918)
(MGI:6316558|PMID:30843071)
RGD PMID:15084255 PMID:15233918 PMID:30843071 MGI:3040153 MGI:3047174 MGI:6316558 NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
JBrowse link
G Rtn4r reticulon 4 receptor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
JBrowse link
G Runx3 RUNX family transcription factor 3 acts_upstream_of_or_within ISO MGI:2179229 (MGI:2387717|PMID:12352981) RGD PMID:12352981 MGI:2387717 NCBI chr 5:147,393,926...147,419,161
Ensembl chr 5:147,360,994...147,419,156
JBrowse link
G Ryk receptor-like tyrosine kinase involved_in ISO (MGI:3625635|PMID:16723543), (MGI:4887339|PMID:16116452) RGD PMID:16116452 PMID:16723543 MGI:3625635 MGI:4887339 NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within ISO MGI:3043422 (MGI:3778100|PMID:18354028) RGD PMID:18354028 MGI:3778100 NCBI chr 1:86,353,917...86,363,836
Ensembl chr 1:86,353,917...86,363,739
JBrowse link
G Sema3a semaphorin 3A acts_upstream_of_or_within
involved_in
ISO
IBA
IGI
MGI:2158944|MGI:2449920 (MGI:3525900|PMID:15604101), (MGI:3578029|PMID:15814794), (MGI:3588545|PMID:15869472), (MGI:3653290|PMID:12435358), (MGI:3710026|PMID:17428830), (MGI:3711619|PMID:17417650)
PMID:21873635
PMID:21068336
RGD PMID:12435358 PMID:15604101 PMID:15814794 PMID:15869472 PMID:17417650 More... MGI:3525900 MGI:3578029 MGI:3588545 MGI:3653290 MGI:3710026 MGI:3711619, RGD:13792537, RGD:8554551 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Sema3b semaphorin 3B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:108,271,663...108,280,326
Ensembl chr 8:108,271,666...108,282,919
JBrowse link
G Sema3c semaphorin 3C involved_in ISO
IBA
(MGI:5315341|PMID:17021275)
PMID:21873635
RGD PMID:17021275 PMID:21873635 MGI:5315341, RGD:13792537 NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
JBrowse link
G Sema3d semaphorin 3D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930
JBrowse link
G Sema3e semaphorin 3E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
JBrowse link
G Sema3f semaphorin 3F acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3653290|PMID:12435358)
PMID:21873635
(PMID:15814794)
RGD PMID:12435358 PMID:15814794 PMID:21873635 MGI:3653290, RGD:13792537 NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
JBrowse link
G Sema3g semaphorin 3G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
JBrowse link
G Sema4a semaphorin 4A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
JBrowse link
G Sema4b semaphorin 4B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:134,136,646...134,177,777
Ensembl chr 1:134,149,536...134,177,775
JBrowse link
G Sema4c semaphorin 4C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
G Sema4d semaphorin 4D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
JBrowse link
G Sema4f ssemaphorin 4F involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10051670 PMID:21873635 RGD:69991, RGD:13792537 NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
JBrowse link
G Sema4g semaphorin 4G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,849,979...243,865,343
Ensembl chr 1:243,853,854...243,865,341
JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2447390|PMID:12506007)
PMID:21873635
RGD PMID:12506007 PMID:21873635 MGI:2447390, RGD:13792537 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
JBrowse link
G Sema5b semaphorin 5B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:65,102,031...65,225,456
Ensembl chr11:65,102,031...65,225,311
JBrowse link
G Sema6a semaphorin 6A involved_in ISO
IBA
(MGI:3607683|PMID:16205717)
PMID:21873635
RGD PMID:16205717 PMID:21873635 MGI:3607683, RGD:13792537 NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
JBrowse link
G Sema6b semaphorin 6B involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:4454564|PMID:20484647)
UniProt
RGD
PMID:20484647 PMID:21873635 GO_REF:0000024 MGI:4454564, RGD:13792537 NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
JBrowse link
G Sema6c semaphorin 6C involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10049528 PMID:21873635 RGD:69992, RGD:13792537 NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
JBrowse link
G Sema6d semaphorin 6D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:1934268 (MGI:2654974|PMID:12679031), (MGI:2662556|PMID:12756179), (MGI:3628676|PMID:15065125)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12679031 PMID:12756179 PMID:15065125 GO_REF:0000024 GO_REF:0000107 MGI:2654974 MGI:2662556 MGI:3628676 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Slit1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:11748139)
MGI:105088|MGI:1315202|MGI:1315205 (MGI:2181259|PMID:12051827), (MGI:2678272|PMID:12954717), (MGI:3041390|PMID:15091338), (MGI:3621682|PMID:11804571)
PMID:21873635
RGD PMID:11748139 PMID:11804571 PMID:12051827 PMID:12954717 PMID:15091338 More... MGI:2181259 MGI:2678272 MGI:3041390 MGI:3621682, RGD:13792537 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:11748139)
MGI:1315202|MGI:1315203|MGI:2179460|MGI:894663 (MGI:2678272|PMID:12954717), (MGI:2679928|PMID:14605369), (MGI:2683853|PMID:12879062), (MGI:3041390|PMID:15091338), (MGI:3621682|PMID:11804571)
PMID:21873635
RGD PMID:11748139 PMID:11804571 PMID:12879062 PMID:12954717 PMID:14605369 More... MGI:2678272 MGI:2679928 MGI:2683853 MGI:3041390 MGI:3621682, RGD:13792537 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slit3 slit guidance ligand 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2678272|PMID:12954717)
(PMID:11748139)
RGD PMID:11748139 PMID:12954717 PMID:21873635 MGI:2678272, RGD:13792537 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386393|MGI:4459942 (MGI:4940418|PMID:21300867)
Ensembl
RGD
PMID:21300867 GO_REF:0000107 MGI:4940418 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Tenm2 teneurin transmembrane protein 2 involved_in ISO
ISS
(PMID:21724987)
GO_REF:0000024
RGD
UniProt
PMID:21724987 GO_REF:0000024 NCBI chr10:20,480,662...21,706,415
Ensembl chr10:20,481,854...21,705,597
JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:1888389 (MGI:3522686|PMID:15528466) RGD PMID:15528466 MGI:3522686 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Trio trio Rho guanine nucleotide exchange factor involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:78,505,069...78,801,384
Ensembl chr 2:78,505,070...78,803,135
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:109148|MGI:1931271 (MGI:5014119|PMID:21646512) RGD PMID:21646512 MGI:5014119 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
JBrowse link
G Tubb3 tubulin, beta 3 class III involved_in IBA
ISO
ISS
PMID:21873635
(MGI:4441021|PMID:20074521), (MGI:5906064|PMID:28483977)
GO_REF:0000024
(PMID:20074521)
RGD
UniProt
PMID:20074521 PMID:28483977 PMID:21873635 GO_REF:0000024 MGI:4441021 MGI:5906064, RGD:13792537 NCBI chr19:51,457,187...51,466,243
Ensembl chr19:51,457,184...51,466,243
JBrowse link
G Unc5a unc-5 netrin receptor A involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9126742 PMID:21873635 RGD:634450, RGD:13792537 NCBI chr17:9,614,841...9,670,558
Ensembl chr17:9,614,838...9,670,526
JBrowse link
G Unc5b unc-5 netrin receptor B acts_upstream_of_or_within
involved_in
IDA
IGI
IBA
PMID:21673655
PMID:21873635
RGD
MGI
GO_Central
PMID:9126742 PMID:21673655 PMID:21873635 RGD:634450, RGD:8554719, RGD:13792537 NCBI chr20:28,697,726...28,764,474
Ensembl chr20:28,697,726...28,764,537
JBrowse link
G Unc5c unc-5 netrin receptor C involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000117
MGI:2679336 (MGI:5464968|PMID:23144223)
UniProtKB:Q9ERC8 (MGI:6274971|PMID:22685302)
GO_REF:0000024
UniProt
RGD
PMID:22685302 PMID:23144223 PMID:21873635 GO_REF:0000024 GO_REF:0000117 MGI:5464968 MGI:6274971, RGD:13792537 NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
JBrowse link
G Unc5d unc-5 netrin receptor D involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000117
MGI:3603594 (MGI:5486433|PMID:21673655)
UniProt
RGD
PMID:21673655 PMID:21873635 GO_REF:0000117 MGI:5486433, RGD:13792537 NCBI chr16:62,860,119...63,406,932
Ensembl chr16:62,860,174...63,401,143
JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in ISO (MGI:4418596|PMID:19706539) RGD PMID:19706539 MGI:4418596 NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479
JBrowse link
G Vasp vasodilator-stimulated phosphoprotein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:108360 (MGI:3054149|PMID:15371503)
RGD PMID:15371503 PMID:21873635 MGI:3054149, RGD:13792537 NCBI chr 1:78,910,009...78,925,791
Ensembl chr 1:78,910,011...78,925,061
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO MGI:1859863 (MGI:1350761|PMID:10601035) RGD PMID:10601035 MGI:1350761 NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
JBrowse link
G Vstm2l V-set and transmembrane domain containing 2 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:146,571,099...146,600,930
Ensembl chr 3:146,571,278...146,600,325
JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4949958|PMID:21483795) RGD PMID:21483795 MGI:4949958 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
axon midline choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2154522 (MGI:69837|PMID:8001115)
UniProt
RGD
PMID:8001115 GO_REF:0000024 MGI:69837 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1857771 (MGI:3051707|PMID:15240555) RGD PMID:15240555 MGI:3051707 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IEA
ISO
IEP
GO_REF:0000002
UniProtKB:Q7TPD3 (MGI:3823169|PMID:18986510)
InterPro
RGD
PMID:18986510 PMID:18986510 GO_REF:0000002 MGI:3823169, RGD:2314842 NCBI chr11:10,580,863...11,621,672
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO UniProtKB:O89026 (MGI:3823169|PMID:18986510) RGD PMID:18986510 MGI:3823169 NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
JBrowse link
G Robo3 roundabout guidance receptor 3 involved_in
acts_upstream_of_or_within
ISO (MGI:3823169|PMID:18986510)
(MGI:3834283|PMID:18466743)
RGD PMID:18466743 PMID:18986510 MGI:3823169 MGI:3834283 NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
JBrowse link
axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 NOT|acts_upstream_of_or_within ISO MGI:88057 (MGI:70238|PMID:7798939) RGD PMID:7798939 MGI:70238 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoe apolipoprotein E NOT|acts_upstream_of_or_within ISO MGI:88049 (MGI:70238|PMID:7798939) RGD PMID:7798939 MGI:70238 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO (MGI:85682|PMID:9009190) RGD PMID:9009190 MGI:85682 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Chl1 cell adhesion molecule L1-like IEP
NAS
RGD PMID:14707551 PMID:14707551 RGD:1303346, RGD:1303346 NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 IEP RGD PMID:11069908 RGD:1298825 NCBI chr 8:110,220,653...110,234,750
Ensembl chr 8:110,220,653...110,234,758
JBrowse link
G Ctnna1 catenin alpha 1 IEP RGD PMID:12387456 RGD:632464 NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
JBrowse link
G Dag1 dystroglycan 1 IEP RGD PMID:16228655 RGD:11537480 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Dhfr dihydrofolate reductase involved_in IMP PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (MGI:6391459|PMID:21935678) RGD PMID:21935678 MGI:6391459 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:4460071|PMID:20424322) RGD PMID:20424322 MGI:4460071 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Gap43 growth associated protein 43 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
JBrowse link
G Isl1 ISL LIM homeobox 1 IEP RGD PMID:10363827 RGD:2311122 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Jak2 Janus kinase 2 IMP RGD PMID:15716400 RGD:1641846 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jam3 junctional adhesion molecule 3 IEP RGD PMID:22950044 RGD:7488944 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2445420 (MGI:3772001|PMID:15233917) RGD PMID:15233917 MGI:3772001 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G LOC100912195 protein BEX1-like acts_upstream_of_or_within ISO (MGI:4845807|PMID:20731761) RGD PMID:20731761 MGI:4845807 NCBI chr 1:110,047,861...110,051,812 JBrowse link
G Mag myelin-associated glycoprotein acts_upstream_of_or_within ISO MGI:1328321 (MGI:4845807|PMID:20731761) RGD PMID:20731761 MGI:4845807 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in IMP PMID:25944905 UniProt PMID:25944905 RGD:13673780 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in IMP PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
JBrowse link
G Nefh neurofilament heavy chain IDA RGD PMID:10646539 RGD:9698439 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:15206821 RGD:9698447 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
JBrowse link
G Nrep neuronal regeneration related protein involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15485502 PMID:21873635 RGD:1540387, RGD:13792537 NCBI chr18:25,017,069...25,046,564
Ensembl chr18:25,017,083...25,046,591
JBrowse link
G Rxra retinoid X receptor alpha IEP RGD PMID:16782282 RGD:1643108 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Vcan versican IEP RGD PMID:12526031 RGD:632591 NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
JBrowse link
axon target recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO MGI:1930038 (MGI:3511733|PMID:15464571) RGD PMID:15464571 MGI:3511733 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Foxb1 forkhead box B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1352733|PMID:10662642), (MGI:1931655|PMID:11170346)
UniProt
RGD
PMID:10662642 PMID:11170346 GO_REF:0000024 MGI:1352733 MGI:1931655 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO MGI:2183278 (MGI:3046454|PMID:15182301) RGD PMID:15182301 MGI:3046454 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 acts_upstream_of_or_within ISO MGI:1856882 (MGI:66533|PMID:8474599) RGD PMID:8474599 MGI:66533 NCBI chr14:41,485,033...41,495,590
Ensembl chr14:41,485,031...41,495,590
JBrowse link
axonal fasciculation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amigo1 adhesion molecule with Ig like domain 1 involved_in IDA PMID:12629050 UniProt PMID:12629050 RGD:634626 NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO
GO_REF:0000024
(MGI:1933687|PMID:11283609)
UniProt
RGD
PMID:11283609 GO_REF:0000024 MGI:1933687 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
JBrowse link
G Casp3 caspase 3 IMP RGD PMID:25898930 RGD:13781947 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Casp6 caspase 6 IMP RGD PMID:25898930 RGD:13781947 NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1347398|PMID:10545161)
UniProt
RGD
PMID:10545161 GO_REF:0000024 MGI:1347398 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Celsr3 cadherin, EGF LAG seven-pass G-type receptor 3 acts_upstream_of_or_within ISO MGI:3578665 (MGI:3578066|PMID:15778712) RGD PMID:15778712 MGI:3578066 NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
JBrowse link
G Cnr1 cannabinoid receptor 1 acts_upstream_of_or_within ISO MGI:1857736 (MGI:4837552|PMID:20962221) RGD PMID:20962221 MGI:4837552 NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099
JBrowse link
G Cntn2 contactin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181052 (MGI:3804601|PMID:18650339)
Ensembl
RGD
PMID:18650339 GO_REF:0000107 MGI:3804601 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
JBrowse link
G Crtac1 cartilage acidic protein 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5086019|PMID:21817055)
PMID:21873635
RGD PMID:21817055 PMID:21873635 MGI:5086019, RGD:13792537 NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421
JBrowse link
G Efna5 ephrin A5 NAS RGD PMID:7748564 RGD:728210 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (MGI:3610776|PMID:16284245) RGD PMID:16284245 MGI:3610776 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G L1cam L1 cell adhesion molecule IMP RGD PMID:3856258 RGD:11570517 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IMP RGD PMID:3856258 RGD:11570517 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Ncam2 neural cell adhesion molecule 2 IEP RGD PMID:15174086 RGD:1303997 NCBI chr11:20,104,974...20,592,168
Ensembl chr11:20,104,925...20,591,984
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:2653048 (MGI:3582873|PMID:15972963) RGD PMID:15972963 MGI:3582873 NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within ISO MGI:3512099 (MGI:3710026|PMID:17428830) RGD PMID:17428830 MGI:3710026 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IDA RGD PMID:16150606 RGD:9590115 NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
JBrowse link
G Rtn4 reticulon 4 involved_in IDA
ISO
IEA
PMID:20573699
(MGI:4830045|PMID:20573699)
GO_REF:0000107
RGD
Ensembl
PMID:20573699 PMID:20573699 GO_REF:0000107 MGI:4830045, RGD:8554113 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Sema3a semaphorin 3A acts_upstream_of_or_within ISO MGI:2158944 (MGI:3710026|PMID:17428830) RGD PMID:17428830 MGI:3710026 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Sema5a semaphorin 5A involved_in IDA PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 IMP RGD PMID:25898930 RGD:13781947 NCBI chr 9:17,879,156...17,954,085
Ensembl chr 9:17,879,156...17,954,085
JBrowse link
axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12504890 PMID:21873635 RGD:728124, RGD:13792537 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Actbl2 actin, beta-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:42,858,020...42,860,767
Ensembl chr 2:42,858,020...42,860,767
JBrowse link
G Adcy1 adenylate cyclase 1 acts_upstream_of_or_within ISO MGI:1857775 (MGI:3699973|PMID:17229090) RGD PMID:17229090 MGI:3699973 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
JBrowse link
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:27642048)
MGI:1856984 (MGI:3618456|PMID:2917690)
RGD PMID:2917690 PMID:27642048 MGI:3618456 NCBI chr18:60,954,268...60,999,110
Ensembl chr18:60,954,268...60,999,110
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 IMP RGD PMID:16802292 RGD:1599082 NCBI chr 9:60,613,182...60,686,394
Ensembl chr 9:60,613,167...60,670,737
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 IDA RGD PMID:12629050 RGD:634626 NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
JBrowse link
G Ank3 ankyrin 3 involved_in ISO (MGI:5426783|PMID:11724816) RGD PMID:11724816 MGI:5426783 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:98956 (MGI:3047466|PMID:15207235), (MGI:3806438|PMID:18716223) RGD PMID:15207235 PMID:18716223 MGI:3047466 MGI:3806438 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2136847 (MGI:3606204|PMID:9390996)
UniProt
RGD
PMID:9390996 GO_REF:0000024 MGI:3606204 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atl1 atlastin GTPase 1 involved_in IMP PMID:16537571 UniProt PMID:16537571 RGD:8553504 NCBI chr 6:88,377,168...88,475,242
Ensembl chr 6:88,377,239...88,475,204
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO MGI:2663971 (MGI:3578473|PMID:15664173) RGD PMID:15664173 MGI:3578473 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO (MGI:85682|PMID:9009190) RGD PMID:9009190 MGI:85682 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:4462353|PMID:17482548)
PMID:21873635
UniProt
RGD
PMID:17482548 PMID:21873635 GO_REF:0000024 MGI:4462353, RGD:13792537 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:4462353|PMID:17482548)
GO_REF:0000024
RGD
UniProt
PMID:17482548 PMID:21873635 GO_REF:0000024 MGI:4462353, RGD:13792537 NCBI chr 1:197,035,522...197,088,624
Ensembl chr 1:197,035,633...197,088,092
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F acts_upstream_of_or_within ISO MGI:3609549 (MGI:3608035|PMID:16155113) RGD PMID:16155113 MGI:3608035 NCBI chr  X:14,868,096...14,896,413
Ensembl chr  X:14,868,024...14,896,413
JBrowse link
G Cck cholecystokinin involved_in
acts_upstream_of_or_within
ISS
ISO
PMID:15152034
(MGI:3573824|PMID:15152034)
RGD PMID:15152034 PMID:15152034 MGI:3573824, RGD:8553273 NCBI chr 8:121,153,499...121,160,194
Ensembl chr 8:121,153,500...121,160,084
JBrowse link
G Cckar cholecystokinin A receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3573824|PMID:15152034)
Ensembl
RGD
PMID:15152034 GO_REF:0000107 MGI:3573824 NCBI chr14:57,292,397...57,300,747
Ensembl chr14:57,292,397...57,300,747
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1928548|PMID:11163260)
RGD PMID:11163260 PMID:21873635 MGI:1928548, RGD:13792537 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase acts_upstream_of_or_within ISO MGI:3051635 (MGI:3050897|PMID:12590258) RGD PMID:12590258 MGI:3050897 NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720
JBrowse link
G Cntn2 contactin 2 IDA RGD PMID:2317872 RGD:727707 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISO MGI:2384080 (MGI:6269164|PMID:28370195) RGD PMID:28370195 MGI:6269164 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (MGI:6269164|PMID:28370195) RGD PMID:28370195 MGI:6269164 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO MGI:2153538 (MGI:2179186|PMID:11988169) RGD PMID:11988169 MGI:2179186 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:3654578|PMID:16691566) RGD PMID:16691566 MGI:3654578 NCBI chr 4:109,293,978...110,443,413
Ensembl chr 4:109,293,978...110,443,522
JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within ISO MGI:3617379 (MGI:3614627|PMID:16387639) RGD PMID:16387639 MGI:3614627 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO MGI:1857789 (MGI:2449888|PMID:12533617) RGD PMID:12533617 MGI:2449888 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (PMID:16982419) RGD PMID:16982419 NCBI chr 5:113,599,371...113,782,871
Ensembl chr 5:113,600,198...113,782,813
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2387895 (MGI:2136539|PMID:11438590) RGD PMID:11438590 MGI:2136539 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within ISO MGI:2182636 (MGI:2137781|PMID:11498051) RGD PMID:11498051 MGI:2137781 NCBI chr16:7,854,849...7,884,404
Ensembl chr16:7,854,849...7,900,600
JBrowse link
G Dst dystonin acts_upstream_of_or_within ISO MGI:1856672|MGI:1856673 (MGI:60062|PMID:1634998) RGD PMID:1634998 MGI:60062 NCBI chr 9:36,135,657...36,529,617
Ensembl chr 9:36,135,284...36,529,615
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3028427|PMID:14734535) RGD PMID:14734535 MGI:3028427 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:9030624 RGD:68774 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (MGI:3763776|PMID:17951031) RGD PMID:17951031 MGI:3763776 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Flot1 flotillin 1 acts_upstream_of_or_within ISO (MGI:3847013|PMID:19458231) RGD PMID:19458231 MGI:3847013 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO MGI:98956 (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IMP RGD PMID:16845384 RGD:1624300 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Isl2 ISL LIM homeobox 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
JBrowse link
G Kalrn kalirin, RhoGEF kinase IDA RGD PMID:12177196 RGD:628431 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Klf7 Kruppel like factor 7 acts_upstream_of_or_within ISO MGI:3581890 (MGI:3581378|PMID:15964824) RGD PMID:15964824 MGI:3581378 NCBI chr 9:65,433,683...65,526,372
NCBI chr 9:65,437,535...65,484,720
Ensembl chr 9:65,437,167...65,526,261
JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in IMP PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chr10:45,379,423...45,394,096
Ensembl chr10:45,379,515...45,394,094
JBrowse link
G Lmtk2 lemur tyrosine kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:10,426,772...10,508,750
Ensembl chr12:10,426,777...10,508,750
JBrowse link
G Map1a microtubule-associated protein 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Map1b microtubule-associated protein 1B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:97180 (MGI:3614337|PMID:11891784)
RGD PMID:11891784 PMID:21873635 MGI:3614337, RGD:13792537 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
JBrowse link
G Map1s microtubule-associated protein 1S involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,516,759...18,527,777
Ensembl chr16:18,517,574...18,527,988
JBrowse link
G Map2 microtubule-associated protein 2 acts_upstream_of_or_within ISO MGI:1306778 (MGI:3614337|PMID:11891784), (MGI:4836447|PMID:20600662) RGD PMID:11891784 PMID:20600662 MGI:3614337 MGI:4836447 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
JBrowse link
G Mapt microtubule-associated protein tau acts_upstream_of_or_within ISO MGI:1306778 (MGI:3614337|PMID:11891784) RGD PMID:11891784 MGI:3614337 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445 (MGI:1933038|PMID:11283949) RGD PMID:11283949 MGI:1933038 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:2653048 (MGI:3530392|PMID:15649943), (MGI:3582873|PMID:15972963) RGD PMID:15649943 PMID:15972963 MGI:3530392 MGI:3582873 NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
JBrowse link
G Nkx2-8 NK2 homeobox 8 acts_upstream_of_or_within ISO MGI:2655862 (MGI:3607408|PMID:16267219) RGD PMID:16267219 MGI:3607408 NCBI chr 6:74,086,274...74,087,977
Ensembl chr 6:74,086,274...74,087,977
JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 acts_upstream_of_or_within ISO (PMID:24794856) RGD PMID:24794856 NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:1933835 (MGI:3526784|PMID:15598981), (MGI:3604921|PMID:16120638) RGD PMID:15598981 PMID:16120638 MGI:3526784 MGI:3604921 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within ISO (MGI:1861288|PMID:10908620) RGD PMID:10908620 MGI:1861288 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Ntng1 netrin G1 acts_upstream_of_or_within ISO (MGI:2158548|PMID:11804778) RGD PMID:11804778 MGI:2158548 NCBI chr 2:197,462,785...197,827,681
Ensembl chr 2:197,463,945...197,826,997
JBrowse link
G Ntng2 netrin G2 acts_upstream_of_or_within ISO (MGI:2158548|PMID:11804778) RGD PMID:11804778 MGI:2158548 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1932085 (MGI:3526784|PMID:15598981)
Ensembl
RGD
PMID:15598981 GO_REF:0000107 MGI:3526784 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2429686 (MGI:3526784|PMID:15598981)
Ensembl
RGD
PMID:15598981 GO_REF:0000107 MGI:3526784 NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4940954|PMID:21115725)
UniProt
RGD
PMID:21115725 GO_REF:0000024 MGI:4940954 NCBI chr  X:107,116,308...107,374,342
Ensembl chr  X:107,260,898...107,368,314
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856158 (MGI:3513567|PMID:15514979) RGD PMID:15514979 MGI:3513567 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA
ISO
IMP
GO_REF:0000107
(MGI:4418607|PMID:18842885)
Ensembl
RGD
PMID:18842885 PMID:18842885 GO_REF:0000107 MGI:4418607, RGD:8554167 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO (MGI:3037391|PMID:14741049) RGD PMID:14741049 MGI:3037391 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988
JBrowse link
G Pitpna phosphatidylinositol transfer protein, alpha involved_in ISO (MGI:4839451|PMID:16244667) RGD PMID:16244667 MGI:4839451 NCBI chr10:60,430,712...60,473,564
Ensembl chr10:60,430,748...60,471,342
JBrowse link
G Plppr4 phospholipid phosphatase related 4 involved_in IDA
IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro
RGD
PMID:12730698 PMID:21873635 GO_REF:0000002, RGD:1299556, RGD:13792537 NCBI chr 2:205,371,317...205,412,302
Ensembl chr 2:205,371,322...205,412,302
JBrowse link
G Pou4f2 POU class 4 homeobox 2 acts_upstream_of_or_within ISO MGI:2429632|MGI:2429634 (MGI:2429619|PMID:10357904) RGD PMID:10357904 MGI:2429619 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within ISO (MGI:2447085|PMID:12482708) RGD PMID:12482708 MGI:2447085 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2665215|PMID:12700241)
(MGI:1336768|PMID:10234020)
Ensembl
RGD
PMID:10234020 PMID:12700241 GO_REF:0000107 MGI:1336768 MGI:2665215 NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in IMP PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3762127 (MGI:3762126|PMID:11359932)
RGD PMID:11359932 PMID:21873635 MGI:3762126, RGD:13792537 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IMP PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Rnf165 ring finger protein 165 acts_upstream_of_or_within ISO MGI:5516581 (MGI:5499270|PMID:23610558) RGD PMID:23610558 MGI:5499270 NCBI chr18:70,984,566...71,100,836
Ensembl chr18:70,989,731...71,100,836
JBrowse link
G Rtn4r reticulon 4 receptor acts_upstream_of_or_within ISO (MGI:1933685|PMID:11201742) RGD PMID:11201742 MGI:1933685 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G Ryk receptor-like tyrosine kinase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:98956 (MGI:3510085|PMID:15454084)
RGD PMID:15454084 PMID:21873635 MGI:3510085, RGD:13792537 NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
JBrowse link
G Sema4a semaphorin 4A involved_in ISO (MGI:5315684|PMID:20043131) RGD PMID:20043131 MGI:5315684 NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
JBrowse link
G Shtn1 shootin 1 involved_in
acts_upstream_of_or_within
IMP
IDA
PMID:17439943
PMID:17030985
HGNC-UCL
MGI
PMID:17439943 PMID:17030985 RGD:8554472, RGD:8554246 NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO MGI:2179459 (MGI:3626138|PMID:12097499) RGD PMID:12097499 MGI:3626138 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:2179460 (MGI:3626138|PMID:12097499) RGD PMID:12097499 MGI:3626138 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2677606|PMID:14550773)
RGD PMID:14550773 PMID:21873635 MGI:2677606, RGD:13792537 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2677606|PMID:14550773)
RGD PMID:14550773 PMID:21873635 MGI:2677606, RGD:13792537 NCBI chr  X:145,246,448...145,259,983
Ensembl chr  X:145,246,460...145,271,220
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2677606|PMID:14550773)
RGD PMID:14550773 PMID:21873635 MGI:2677606, RGD:13792537 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 acts_upstream_of_or_within ISO (MGI:2677606|PMID:14550773) RGD PMID:14550773 MGI:2677606 NCBI chr  X:142,706,495...142,718,968
Ensembl chr  X:142,706,338...142,718,575
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2677606|PMID:14550773)
RGD PMID:14550773 PMID:21873635 MGI:2677606, RGD:13792537 NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2677606|PMID:14550773)
RGD PMID:14550773 PMID:21873635 MGI:2677606, RGD:13792537 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Smn1 survival of motor neuron 1, telomeric acts_upstream_of_or_within ISO (MGI:4439458|PMID:20176735) RGD PMID:20176735 MGI:4439458 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
JBrowse link
G Snap25 synaptosome associated protein 25 IEP RGD PMID:15478103 RGD:1581079 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IMP PMID:18842885 BHF-UCL PMID:18842885 RGD:8554167 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Spast spastin involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954
JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 acts_upstream_of_or_within ISO MGI:1856939 (MGI:60062|PMID:1634998) RGD PMID:1634998 MGI:60062 NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in IMP
ISO
(MGI:4462353|PMID:17482548) RGD PMID:17482548 PMID:12114407 MGI:4462353, RGD:2291948 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
JBrowse link
G Stmn1 stathmin 1 acts_upstream_of_or_within ISO MGI:2655259 (MGI:2158550|PMID:11839567) RGD PMID:11839567 MGI:2158550 NCBI chr 5:146,680,757...146,687,154
Ensembl chr 5:146,681,436...146,687,154
JBrowse link
G Taok2 TAO kinase 2 involved_in ISO
IEA
UniProtKB:Q6ZQ29 (PMID:22683681)
UniProtKB:Q9UL54 (MGI:5462161|PMID:22683681)
GO_REF:0000107
RGD
Ensembl
PMID:22683681 GO_REF:0000107 MGI:5462161 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
JBrowse link
G Tbce tubulin folding cofactor E acts_upstream_of_or_within ISO MGI:1856997 (MGI:2446402|PMID:12446740) RGD PMID:12446740 MGI:2446402 NCBI chr17:51,290,143...51,336,090
Ensembl chr17:51,290,202...51,336,089
JBrowse link
G Tnn tenascin N acts_upstream_of_or_within ISO (MGI:2664472|PMID:12812753) RGD PMID:12812753 MGI:2664472 NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
JBrowse link
G Top2b DNA topoisomerase II beta acts_upstream_of_or_within ISO MGI:2179201 (MGI:2178151|PMID:10615047) RGD PMID:10615047 MGI:2178151 NCBI chr15:9,051,661...9,111,220
Ensembl chr15:9,051,341...9,112,085
JBrowse link
G Trim46 tripartite motif-containing 46 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5708763|PMID:26671463)
GO_REF:0000107
RGD
Ensembl
PMID:26671463 GO_REF:0000107 MGI:5708763 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 acts_upstream_of_or_within ISO MGI:1856882 (MGI:50250|PMID:1630580) RGD PMID:1630580 MGI:50250 NCBI chr14:41,485,033...41,495,590
Ensembl chr14:41,485,031...41,495,590
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:3037621|PMID:15014045) RGD PMID:15014045 MGI:3037621 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2159246 (MGI:2157790|PMID:11830579)
Ensembl
RGD
PMID:11830579 GO_REF:0000107 MGI:2157790 NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:101766 (MGI:3510085|PMID:15454084) RGD PMID:15454084 MGI:3510085 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:5707582|PMID:23517308) RGD PMID:23517308 MGI:5707582 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 involved_in ISS
ISO
GO_REF:0000024
(MGI:5775247|PMID:26232532)
UniProt
RGD
PMID:26232532 GO_REF:0000024 MGI:5775247 NCBI chr 7:46,369,963...46,433,691
Ensembl chr 7:46,369,988...46,433,764
JBrowse link
axonogenesis involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col25a1 collagen type XXV alpha 1 chain acts_upstream_of_or_within ISO (MGI:5553181|PMID:24453327) RGD PMID:24453327 MGI:5553181 NCBI chr 2:218,755,152...219,154,348
Ensembl chr 2:218,755,691...219,153,501
JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO MGI:2158947 (MGI:6304148|PMID:30735130) RGD PMID:30735130 MGI:6304148 NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
JBrowse link
G Edn1 endothelin 1 involved_in ISO MGI:1857637 (MGI:6100594|PMID:24875861), (MGI:6304148|PMID:30735130) RGD PMID:24875861 PMID:30735130 MGI:6100594 MGI:6304148 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ednra endothelin receptor type A involved_in ISO
IEA
MGI:1857473|MGI:2687362 (MGI:6100594|PMID:24875861), (MGI:6304148|PMID:30735130)
GO_REF:0000107
RGD
Ensembl
PMID:24875861 PMID:30735130 GO_REF:0000107 MGI:6100594 MGI:6304148 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (MGI:3714212|PMID:17557302) RGD PMID:17557302 MGI:3714212 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Itga4 integrin subunit alpha 4 IMP RGD PMID:16181811 RGD:13593536 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1858209 (MGI:3626127|PMID:16763034)
PMID:21873635
Ensembl
RGD
PMID:16763034 PMID:21873635 GO_REF:0000107 MGI:3626127, RGD:13792537 NCBI chr10:104,811,107...104,820,358
Ensembl chr10:104,811,403...104,820,367
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:83009|PMID:8815902)
UniProt
RGD
PMID:8815902 GO_REF:0000024 MGI:83009 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
branchiomotor neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO MGI:3777464 (MGI:3776727|PMID:18031680) RGD PMID:18031680 MGI:3776727 NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Plxna3 plexin A3 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr  X:152,115,699...152,131,608
Ensembl chr  X:152,115,819...152,131,603
JBrowse link
G Plxna4 plexin A4 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (MGI:3610767|PMID:16357211) RGD PMID:16357211 MGI:3610767 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO
GO_REF:0000024
(MGI:1933687|PMID:11283609)
UniProt
RGD
PMID:11283609 GO_REF:0000024 MGI:1933687 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within ISO (MGI:3056242|PMID:15378065) RGD PMID:15378065 MGI:3056242 NCBI chr 2:29,263,886...29,560,595
Ensembl chr 2:29,263,886...29,560,672
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:3587769 (MGI:4829568|PMID:20577052) RGD PMID:20577052 MGI:4829568 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) RGD PMID:30114188 MGI:6196231 NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:6196231|PMID:30114188)
UniProt
RGD
PMID:30114188 GO_REF:0000024 MGI:6196231 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (MGI:3721829|PMID:12097474) RGD PMID:12097474 MGI:3721829 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (MGI:6148478|PMID:24286867) RGD PMID:24286867 MGI:6148478 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (MGI:6148478|PMID:24286867) RGD PMID:24286867 MGI:6148478 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 acts_upstream_of_or_within ISO (MGI:3047464|PMID:15208636) RGD PMID:15208636 MGI:3047464 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18062921 RGD:2293300 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) RGD PMID:16675393 MGI:3629385 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (MGI:3056242|PMID:15378065) RGD PMID:15378065 MGI:3056242 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253|MGI:2158714 (MGI:2181503|PMID:11344259), (MGI:2683795|PMID:14687550), (MGI:3527366|PMID:15608630) RGD PMID:11344259 PMID:14687550 PMID:15608630 MGI:2181503 MGI:2683795 MGI:3527366 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within ISO MGI:1277171 (MGI:3614628|PMID:16387638) RGD PMID:16387638 MGI:3614628 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1330861 (MGI:3614628|PMID:16387638)
Ensembl
RGD
PMID:16387638 GO_REF:0000107 MGI:3614628 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Ephb1 Eph receptor B1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2677305|MGI:2677312 (MGI:2675767|PMID:12971893)
UniProt
RGD
PMID:12971893 GO_REF:0000024 MGI:2675767 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Ephb2 Eph receptor B2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2675767|PMID:12971893)
RGD PMID:12971893 PMID:21873635 MGI:2675767, RGD:13792537 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 acts_upstream_of_or_within ISO (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Ephb6 Eph receptor B6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:70,491,973...70,507,230
Ensembl chr 4:70,491,973...70,507,230
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3759703|PMID:17901218)
MGI:3777464|MGI:3777465 (MGI:3776727|PMID:18031680)
RGD PMID:17901218 PMID:18031680 MGI:3759703 MGI:3776727 NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2157566 (MGI:1350702|PMID:10585298)
Ensembl
RGD
PMID:10585298 GO_REF:0000107 MGI:1350702 NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO MGI:5315763 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3710201 (MGI:3708238|PMID:17197442)
PMID:21873635
RGD PMID:17197442 PMID:21873635 MGI:3708238, RGD:13792537 NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
JBrowse link
chemoattraction of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:26598525 RGD:11097297 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp2 LDL receptor related protein 2 IMP RGD PMID:26598525 RGD:11097297 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within ISO (MGI:3834283|PMID:18466743) RGD PMID:18466743 MGI:3834283 NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
JBrowse link
chemoattraction of dopaminergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt7b Wnt family member 7B involved_in ISO (MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:4866939 NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
chemoattraction of serotonergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:4866939 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
chemorepulsion of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntn1 netrin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5906064|PMID:28483977)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28483977 GO_REF:0000024 GO_REF:0000107 MGI:5906064 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within ISO (MGI:3834283|PMID:18466743) RGD PMID:18466743 MGI:3834283 NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
JBrowse link
G Unc5c unc-5 netrin receptor C involved_in ISS
ISO
GO_REF:0000024
(MGI:5906064|PMID:28483977)
UniProt
RGD
PMID:28483977 GO_REF:0000024 MGI:5906064 NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
JBrowse link
chemorepulsion of branchiomotor axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna4 plexin A4 acts_upstream_of_or_within ISO MGI:3578655 (MGI:3578029|PMID:15814794) RGD PMID:15814794 MGI:3578029 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
JBrowse link
chemorepulsion of dopaminergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ryk receptor-like tyrosine kinase involved_in ISO UniProtKB:P22725 (MGI:5707582|PMID:23517308) RGD PMID:23517308 MGI:5707582 NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4866939|PMID:21106844), (MGI:5707582|PMID:23517308) RGD PMID:21106844 PMID:23517308 MGI:4866939 MGI:5707582 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
collateral sprouting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:2175933|PMID:11864995) RGD PMID:11864995 MGI:2175933 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Efna5 ephrin A5 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5547631|PMID:24113571)
GO_REF:0000107
RGD
Ensembl
PMID:24113571 GO_REF:0000107 MGI:5547631 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Nin ninein acts_upstream_of_or_within ISO MGI:1344407 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
JBrowse link
G Septin7 septin 7 acts_upstream_of_or_within ISO (MGI:5547631|PMID:24113571) RGD PMID:24113571 MGI:5547631 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,219,765...29,342,094
Ensembl chr 3:29,218,301...29,345,157
JBrowse link
collateral sprouting in absence of injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:88047 (MGI:3577153|PMID:15689559)
UniProt
RGD
PMID:15689559 GO_REF:0000024 MGI:3577153 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:3765263|PMID:17956734) RGD PMID:17956734 MGI:3765263 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800
JBrowse link
commissural neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO MGI:1934902 (MGI:5470500|PMID:23217742) RGD PMID:23217742 MGI:5470500 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:81675|PMID:8689685) RGD PMID:8689685 MGI:81675 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:2388632 (MGI:2682446|PMID:14671310) RGD PMID:14671310 MGI:2682446 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P13595 (MGI:5440338|PMID:22998873)
Ensembl
RGD
PMID:22998873 GO_REF:0000107 MGI:5440338 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Ncam1 neural cell adhesion molecule 1 involved_in ISO UniProtKB:P48540 (MGI:5440338|PMID:22998873) RGD PMID:22998873 MGI:5440338 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:4453290|PMID:19961580)
UniProt
RGD
PMID:19961580 GO_REF:0000024 MGI:4453290 NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5141569|PMID:21658587) RGD PMID:21658587 MGI:5141569 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Ptch1 patched 1 IMP RGD PMID:19946319 RGD:12879429 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Robo3 roundabout guidance receptor 3 acts_upstream_of_or_within ISO (MGI:3834283|PMID:18466743) RGD PMID:18466743 MGI:3834283 NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
JBrowse link
G Ryk receptor-like tyrosine kinase acts_upstream_of_or_within ISO MGI:2667542 (MGI:3625635|PMID:16723543) RGD PMID:16723543 MGI:3625635 NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:19946319 RGD:12879429 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:19946319 PMID:21873635 RGD:12879429, RGD:13792537 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
NOT|involved_in
ISO (MGI:5141569|PMID:21658587) RGD PMID:21658587 MGI:5141569 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461 NCBI chr 4:157,551,276...157,552,924 JBrowse link
G Nin ninein acts_upstream_of_or_within ISO MGI:1344407 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (PMID:9063735) RGD PMID:9063735 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO MGI:5315763 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO (PMID:23932106) RGD PMID:23932106 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4867728 (MGI:4848234|PMID:21055390)
Ensembl
RGD
PMID:21055390 GO_REF:0000107 MGI:4848234 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,219,765...29,342,094
Ensembl chr 3:29,218,301...29,345,157
JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1b sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3043422 (MGI:3778100|PMID:18354028)
GO_REF:0000107
RGD
Ensembl
PMID:18354028 GO_REF:0000107 MGI:3778100 NCBI chr 1:86,353,917...86,363,836
Ensembl chr 1:86,353,917...86,363,739
JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:10975526) RGD PMID:10975526 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744|MGI:99217 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Cdh11 cadherin 11 acts_upstream_of_or_within ISO MGI:1930001 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr19:2,148,447...2,305,754
Ensembl chr19:2,148,458...2,304,272
JBrowse link
G Epha4 Eph receptor A4 involved_in ISS
ISO
GO_REF:0000024
(MGI:1306963|PMID:9789074)
UniProt
RGD
PMID:9789074 GO_REF:0000024 MGI:1306963 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within ISO MGI:3849742 (MGI:3849342|PMID:19398581) RGD PMID:19398581 MGI:3849342 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
JBrowse link
G Nin ninein acts_upstream_of_or_within ISO MGI:1344407 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO MGI:5315763 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO MGI:6451766 (MGI:6141536|PMID:28237315) RGD PMID:28237315 MGI:6141536 NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,219,765...29,342,094
Ensembl chr 3:29,218,301...29,345,157
JBrowse link
dopaminergic neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr3 cadherin, EGF LAG seven-pass G-type receptor 3 involved_in ISO (MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:4866939 NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
JBrowse link
G Fzd3 frizzled class receptor 3 involved_in ISO (MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:4866939 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO (MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:4866939 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
dorsal spinal cord interneuron anterior axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx9 LIM homeobox 9 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr13:50,389,052...50,409,947
Ensembl chr13:50,389,738...50,410,806
JBrowse link
dorsal/ventral axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcc DCC netrin 1 receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1934924 (MGI:3758130|PMID:17898206)
Ensembl
RGD
PMID:17898206 GO_REF:0000107 MGI:3758130 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
JBrowse link
G Fgf8 fibroblast growth factor 8 IMP projection of trochlear axons through the isthmic organizer RGD PMID:12403710 RGD:2289355 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Slit1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1315205 (MGI:3621682|PMID:11804571)
Ensembl
RGD
PMID:11804571 GO_REF:0000107 MGI:3621682 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315203|MGI:2179460 (MGI:3621682|PMID:11804571) RGD PMID:11804571 MGI:3621682 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
efferent axon development in a lateral line nerve term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1926861 (MGI:3621705|PMID:12885554) RGD PMID:12885554 MGI:3621705 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
fasciculation of motor neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha3 Eph receptor A3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3783924|PMID:18403711)
UniProt
RGD
PMID:18403711 GO_REF:0000024 MGI:3783924 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Epha4 Eph receptor A4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3783924|PMID:18403711)
UniProt
RGD
PMID:18403711 GO_REF:0000024 MGI:3783924 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
fasciculation of sensory neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha3 Eph receptor A3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5140627|PMID:21791286)
UniProt
RGD
PMID:21791286 GO_REF:0000024 MGI:5140627 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Epha4 Eph receptor A4 involved_in ISO (MGI:3783924|PMID:18403711) RGD PMID:18403711 MGI:3783924 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5551355|PMID:24052814)
GO_REF:0000024
Ensembl
RGD
CAFA
PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
interneuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180475 (MGI:5774924|PMID:25937343)
Ensembl
RGD
PMID:25937343 GO_REF:0000107 MGI:5774924 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 5:166,648,494...166,648,582 JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 1:133,440,049...133,440,138 JBrowse link
motor neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alcam activated leukocyte cell adhesion molecule acts_upstream_of_or_within ISO MGI:3056579 (MGI:3056232|PMID:15345243) RGD PMID:15345243 MGI:3056232 NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:3607648|PMID:16203963) RGD PMID:16203963 MGI:3607648 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Chn1 chimerin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3767884|PMID:17785183)
UniProt
RGD
PMID:17785183 GO_REF:0000024 MGI:3767884 NCBI chr 3:58,509,822...58,676,774
Ensembl chr 3:58,510,536...58,676,490
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO MGI:1934384 (MGI:3590395|PMID:16129397) RGD PMID:16129397 MGI:3590395 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO MGI:1934442|MGI:3777572 (MGI:3590395|PMID:16129397), (MGI:3776727|PMID:18031680) RGD PMID:16129397 PMID:18031680 MGI:3590395 MGI:3776727 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:96170 (MGI:1306866|PMID:9806922) RGD PMID:9806922 MGI:1306866 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Epha3 Eph receptor A3 NOT|involved_in ISO (MGI:3703403|PMID:17046737) RGD PMID:17046737 MGI:3703403 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Epha4 Eph receptor A4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3767884|PMID:17785183)
UniProt
RGD
PMID:17785183 GO_REF:0000024 MGI:3767884 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1929070 (MGI:1352956|PMID:10655525)
GO_REF:0000107
RGD
Ensembl
PMID:10655525 GO_REF:0000107 MGI:1352956 NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
JBrowse link
G Etv4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO MGI:2387770 (MGI:2385981|PMID:12372283) RGD PMID:12372283 MGI:2385981 NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974
JBrowse link
G Fgf8 fibroblast growth factor 8 IMP projection of trochlear axons through the isthmic organizer RGD PMID:12403710 RGD:2289355 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (MGI:4849611|PMID:20711475) RGD PMID:20711475 MGI:4849611 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:95296 (MGI:1306866|PMID:9806922) RGD PMID:9806922 MGI:1306866 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857626 (MGI:1098901|PMID:9367425)
GO_REF:0000107
RGD
Ensembl
PMID:9367425 GO_REF:0000107 MGI:1098901 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Kif5c kinesin family member 5C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1888955 (MGI:1888858|PMID:10964943)
Ensembl
RGD
PMID:10964943 GO_REF:0000107 MGI:1888858 NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
JBrowse link
G Lamc2 laminin subunit gamma 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:65,284,664...65,344,200
Ensembl chr13:65,284,664...65,344,200
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4849611|PMID:20711475)
UniProt
RGD
PMID:20711475 GO_REF:0000024 MGI:4849611 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO MGI:101776 (MGI:1316601|PMID:9865699) RGD PMID:9865699 MGI:1316601 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
JBrowse link
G Lhx4 LIM homeobox 4 acts_upstream_of_or_within ISO MGI:102673 (MGI:1316601|PMID:9865699) RGD PMID:9865699 MGI:1316601 NCBI chr13:67,873,618...67,927,003
Ensembl chr13:67,877,109...67,927,003
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO MGI:2182358|MGI:2182361|MGI:2182363 (MGI:1344237|PMID:10482234) RGD PMID:10482234 MGI:1344237 NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO MGI:3777464|MGI:3777465 (MGI:3776727|PMID:18031680) RGD PMID:18031680 MGI:3776727 NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1862000 (MGI:3653290|PMID:12435358)
Ensembl
RGD
PMID:12435358 GO_REF:0000107 MGI:3653290 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Ntn1 netrin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Ntn3 netrin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001
JBrowse link
G Ntn5 netrin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,156,985...96,165,997
Ensembl chr 1:96,156,985...96,165,630
JBrowse link
G Plxna4 plexin A4 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rac2 Rac family small GTPase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:110,101,344...110,128,718
Ensembl chr 7:110,116,260...110,128,720
JBrowse link
G Rhog ras homolog family member G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:156,618,713...156,630,710
Ensembl chr 1:156,615,349...156,631,257
JBrowse link
G Rhoh ras homolog family member H involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:42,341,135...42,371,971
Ensembl chr14:42,337,751...42,386,369
JBrowse link
G Rnf165 ring finger protein 165 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5516581 (MGI:5499270|PMID:23610558)
RGD PMID:23610558 PMID:21873635 MGI:5499270, RGD:13792537 NCBI chr18:70,984,566...71,100,836
Ensembl chr18:70,989,731...71,100,836
JBrowse link
G Sema3a semaphorin 3A involved_in IBA
ISO
PMID:21873635
(MGI:3822054|PMID:18804103)
RGD PMID:18804103 PMID:21873635 MGI:3822054, RGD:13792537 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISO
IEA
(PMID:16162649)
GO_REF:0000107
RGD
Ensembl
PMID:16162649 GO_REF:0000107 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:10102268) RGD PMID:10102268 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Tmeff1 transmembrane protein with EGF-like and two follistatin-like domains 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:62,910,740...62,996,494
Ensembl chr 5:62,910,740...62,996,493
JBrowse link
negative regulation of axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis-associated tyrosine kinase acts_upstream_of_or_within ISO MGI:5428170 (MGI:5426470|PMID:22573681)
MGI:101764 (MGI:5426470|PMID:22573681)
RGD PMID:22573681 MGI:5426470 NCBI chr10:105,290,750...105,327,219
Ensembl chr10:105,291,585...105,327,112
JBrowse link
G Actr3 actin related protein 3 IMP RGD PMID:19846719 RGD:11530054 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Arhgap4 Rho GTPase activating protein 4 IMP RGD PMID:17804252 RGD:2313143 NCBI chr  X:151,636,071...151,651,528
Ensembl chr  X:151,632,454...151,651,128
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IMP RGD PMID:16537566 RGD:4890441 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1197518 (MGI:5426470|PMID:22573681) RGD PMID:22573681 MGI:5426470 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1197518 (MGI:5426470|PMID:22573681) RGD PMID:22573681 MGI:5426470 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Cdkl3 cyclin-dependent kinase-like 3 acts_upstream_of_or_within
involved_in
ISO
IBA
IMP
(MGI:4835107|PMID:20347982)
PMID:21873635
RGD PMID:20347982 PMID:21873635 PMID:20347982 MGI:4835107, RGD:13792537, RGD:8693354 NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
JBrowse link
G Dip2b disco-interacting protein 2 homolog B involved_in ISO (MGI:6458180|PMID:32153366) RGD PMID:32153366 MGI:6458180 NCBI chr 7:131,174,575...131,350,417
Ensembl chr 7:131,174,567...131,349,092
JBrowse link
G Draxin dorsal inhibitory axon guidance protein acts_upstream_of_or_within ISO (MGI:4830206|PMID:20621059) RGD PMID:20621059 MGI:4830206 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
JBrowse link
G Fstl4 follistatin-like 4 NOT|acts_upstream_of_or_within ISO (MGI:5566541|PMID:24573299) RGD PMID:24573299 MGI:5566541 NCBI chr10:36,911,228...37,338,665
Ensembl chr10:36,911,420...37,338,588
JBrowse link
G Ifrd1 interferon-related developmental regulator 1 acts_upstream_of_or_within ISO MGI:97321 (MGI:3771687|PMID:18052984) RGD PMID:18052984 MGI:3771687 NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
JBrowse link
G Mag myelin-associated glycoprotein involved_in IMP PMID:9298990 UniProt PMID:9298990 RGD:12050149 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
JBrowse link
G Map2 microtubule-associated protein 2 involved_in IMP
ISO
PMID:28426968
(MGI:6148385|PMID:28426968)
RGD PMID:28426968 PMID:28426968 MGI:6148385, RGD:13514087 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:16601975), (PMID:17712581)
UniProt
RGD
PMID:16601975 PMID:17712581 GO_REF:0000024 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within ISO MGI:107558 (MGI:3505728|PMID:12852851) RGD PMID:12852851 MGI:3505728 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Ntn1 netrin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1353949|PMID:10704383)
Ensembl
RGD
PMID:10704383 GO_REF:0000107 MGI:1353949 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in ISS
ISO
GO_REF:0000024
(MGI:4880863|PMID:19780196)
UniProt
RGD
PMID:19780196 GO_REF:0000024 MGI:4880863 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G RGD1307443 similar to mKIAA0319 protein acts_upstream_of_or_within ISO (PMID:28334068) RGD PMID:28334068 NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
JBrowse link
G Rnf6 ring finger protein 6 acts_upstream_of_or_within ISO MGI:104572 (MGI:3603857|PMID:16204183) RGD PMID:16204183 MGI:3603857 NCBI chr12:8,816,777...8,826,870
Ensembl chr12:8,816,833...8,826,847
JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISO
IDA
ISS
GO_REF:0000107
(MGI:4830045|PMID:20573699)
(PMID:10667797)
Ensembl
RGD
PMID:10667797 PMID:20573699 PMID:20573699 PMID:10667797 GO_REF:0000107 MGI:4830045, RGD:8554113, RGD:8553459 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISS
ISO
GO_REF:0000024
(MGI:5688832|PMID:22923615)
UniProt
RGD
PMID:22923615 GO_REF:0000024 MGI:5688832 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G Sema3a semaphorin 3A acts_upstream_of_or_within IDA
ISO
MGI:106206 (MGI:3505728|PMID:12852851) RGD PMID:12852851 PMID:12077190 MGI:3505728, RGD:628318 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Sema3g semaphorin 3G involved_in ISO (MGI:3619679|PMID:16098142) RGD PMID:16098142 MGI:3619679 NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
JBrowse link
G Sema4f ssemaphorin 4F acts_upstream_of_or_within IDA PMID:10051670 MGI PMID:10051670 RGD:69991 NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
JBrowse link
G Sema6c semaphorin 6C involved_in ISO (PMID:12110693) RGD PMID:12110693 NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
JBrowse link
G Sema6d semaphorin 6D involved_in ISO (PMID:12110693) RGD PMID:12110693 NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO (MGI:2683853|PMID:12879062) RGD PMID:12879062 MGI:2683853 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Tnr tenascin R acts_upstream_of_or_within ISO (MGI:3655167|PMID:16831557) RGD PMID:16831557 MGI:3655167 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
JBrowse link
G Trim46 tripartite motif-containing 46 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
JBrowse link
negative regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 IMP RGD PMID:19884510 RGD:9681717 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within IMP
ISO
(MGI:1289520|PMID:9753685) RGD PMID:9753685 PMID:9288754 MGI:1289520, RGD:633436 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO MGI:107558|MGI:1096347 (MGI:2152659|PMID:11683995) RGD PMID:11683995 MGI:2152659 NCBI chr  X:152,115,699...152,131,608
Ensembl chr  X:152,115,819...152,131,603
JBrowse link
G Ryk receptor-like tyrosine kinase acts_upstream_of_or_within ISO MGI:98958 (MGI:3625635|PMID:16723543) RGD PMID:16723543 MGI:3625635