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ONTOLOGY REPORT - ANNOTATIONS

Term:central element
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Accession:GO:0000801 term browser browse the term
Definition:A structural unit of the synaptonemal complex found between the lateral elements.

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central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G M 4930447C04Rik RIKEN cDNA 4930447C04 gene is_active_in
located_in		 IBA
IDA		 (PMID:27796301) GO_Central
UniProt		 PMID:27796301 GO_REF:0000033 NCBI chr12:72,926,967...72,964,742
Ensembl chr12:72,927,883...72,987,548 		JBrowse link
G H C14orf39 chromosome 14 open reading frame 39 located_in
is_active_in		 ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:60,435,956...60,515,544
Ensembl chr14:60,396,469...60,515,543 		JBrowse link
G B C15H14orf39 chromosome 15 C14orf39 homolog located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:41,040,315...41,090,267
Ensembl chr14:59,304,040...59,351,956 		JBrowse link
G P C1H14orf39 chromosome 1 C14orf39 homolog located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:189,330,137...189,471,874
Ensembl chr 1:189,407,490...189,470,541 		JBrowse link
G D C8H14orf39 chromosome 8 C14orf39 homolog located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:35,486,476...35,542,214
Ensembl chr 8:35,487,228...35,542,218 		JBrowse link
G N CUNH14orf39 chromosome unknown C14orf39 homolog located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624734:40,656,054...40,701,404
Ensembl chrNW_004624734:40,656,132...40,702,148 		JBrowse link
G G CUNH14orf39 chromosome unknown C14orf39 homolog located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:37,596,061...37,707,136
Ensembl chr24:37,626,089...37,676,361 		JBrowse link
G S CUNH14orf39 chromosome unknown C14orf39 homolog located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936495:4,660,616...4,695,338
Ensembl chrNW_004936495:4,660,641...4,694,402 		JBrowse link
G C CUNH14orf39 chromosome unknown C14orf39 homolog located_in ISO (PMID:27796301) UniProt PMID:27796301 NCBI chrNW_004955466:9,158,022...9,194,088
Ensembl chrNW_004955466:9,157,944...9,195,226 		JBrowse link
G N Incenp inner centromere protein located_in ISO (PMID:12584241) MGI PMID:12584241 NCBI chrNW_004624926:405,354...422,492
Ensembl chrNW_004624926:407,362...419,566 		JBrowse link
G G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:11,695,803...11,725,633
Ensembl chr 1:11,692,559...11,720,940 		JBrowse link
G P INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821 		JBrowse link
G S Incenp inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:999,148...1,028,157
Ensembl chrNW_004936581:999,497...1,025,062 		JBrowse link
G D INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,361,376...54,384,649
Ensembl chr18:54,361,378...54,384,641 		JBrowse link
G B INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr11:57,488,790...57,519,552
Ensembl chr11:60,846,199...60,874,540 		JBrowse link
G C Incenp inner centromere protein located_in ISO (PMID:12584241) MGI PMID:12584241 NCBI chrNW_004955511:5,705,948...5,724,167
Ensembl chrNW_004955511:5,706,201...5,720,772 		JBrowse link
G R Incenp inner centromere protein located_in ISO (PMID:12584241) RGD PMID:12584241 NCBI chr 1:206,520,655...206,550,575
Ensembl chr 1:206,523,380...206,553,265 		JBrowse link
G M Incenp inner centromere protein located_in IDA (PMID:12584241) MGI PMID:12584241 NCBI chr19:9,849,659...9,876,853
Ensembl chr19:9,849,660...9,876,915 		JBrowse link
G H INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,124,011...62,153,169
Ensembl chr11:62,123,998...62,155,474 		JBrowse link
G G SDHD succinate dehydrogenase complex subunit D located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 1:103,443,752...103,517,917 JBrowse link
G R Six6os1 Six6 opposite strand transcript 1 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:27796301)		 GO_Central
RGD		 PMID:27796301 GO_REF:0000033 NCBI chr 6:91,579,185...91,615,183
Ensembl chr 6:91,579,325...91,615,148 		JBrowse link
G N Syce1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chrNW_004624737:12,290,317...12,297,823
Ensembl chrNW_004624737:12,290,276...12,297,924 		JBrowse link
G G SYCE1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chr26:53,416,791...53,429,688
Ensembl chr26:53,418,202...53,428,756 		JBrowse link
G P SYCE1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chr14:141,726,708...141,737,830
Ensembl chr14:141,726,208...141,735,919 		JBrowse link
G S Syce1 synaptonemal complex central element protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,723,354...19,731,175
Ensembl chrNW_004936486:19,723,627...19,727,770 		JBrowse link
G D SYCE1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chr28:41,149,228...41,157,422
Ensembl chr28:41,149,229...41,157,371 		JBrowse link
G B SYCE1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 Ensembl chr10:134,866,705...134,878,566 JBrowse link
G C Syce1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chrNW_004955507:6,263,070...6,271,289
Ensembl chrNW_004955507:6,264,059...6,271,729 		JBrowse link
G R Syce1 synaptonemal complex central element protein 1 located_in ISO (PMID:15944401), (PMID:22164254) RGD PMID:15944401 PMID:22164254 NCBI chr 1:195,852,171...195,863,174
Ensembl chr 1:195,852,172...195,863,174 		JBrowse link
G M Syce1 synaptonemal complex central element protein 1 located_in IDA (PMID:15944401), (PMID:22164254) HGNC-UCL PMID:15944401 PMID:22164254 NCBI chr 7:140,357,142...140,367,767
Ensembl chr 7:140,357,142...140,367,765 		JBrowse link
G H SYCE1 synaptonemal complex central element protein 1 located_in IEA
ISS		 (PMID:15944401) Ensembl
HGNC-UCL		 PMID:15944401 GO_REF:0000107 NCBI chr10:133,553,899...133,568,291
Ensembl chr10:133,553,901...133,569,835 		JBrowse link
G N Syce2 synaptonemal complex central element protein 2 located_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624901:478,860...491,577 JBrowse link
G G SYCE2 synaptonemal complex central element protein 2 located_in ISO (PMID:15944401), (PMID:22164254), (PMID:22854038) MGI PMID:15944401 PMID:22164254 PMID:22854038 NCBI chr 6:11,581,915...11,599,770 JBrowse link
G G SYCE2 synaptonemal complex central element protein 2 located_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr 6:11,586,616...11,587,931 JBrowse link
G P SYCE2 synaptonemal complex central element protein 2 located_in
is_active_in		 IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:66,118,439...66,133,454
Ensembl chr 2:66,128,492...66,131,963 		JBrowse link
G S Syce2 synaptonemal complex central element protein 2 located_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936659:1,962,055...1,978,743
Ensembl chrNW_004936659:1,961,243...1,978,743 		JBrowse link
G D SYCE2 synaptonemal complex central element protein 2 located_in
is_active_in		 IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr20:49,267,985...49,285,986
Ensembl chr20:49,281,773...49,283,880 		JBrowse link
G B SYCE2 synaptonemal complex central element protein 2 located_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr19:12,459,646...12,481,833
Ensembl chr19:13,203,595...13,224,052 		JBrowse link
G C Syce2 synaptonemal complex central element protein 2 located_in ISO (PMID:15944401), (PMID:22164254), (PMID:22854038) MGI PMID:15944401 PMID:22164254 PMID:22854038 NCBI chrNW_004955415:31,957,244...31,969,922
Ensembl chrNW_004955415:31,957,489...31,969,859 		JBrowse link
G R Syce2 synaptonemal complex central element protein 2 located_in ISO (PMID:15944401), (PMID:22164254), (PMID:22854038) RGD PMID:15944401 PMID:22164254 PMID:22854038 NCBI chr19:23,266,236...23,291,265
Ensembl chr19:23,268,869...23,300,980 		JBrowse link
G M Syce2 synaptonemal complex central element protein 2 is_active_in
located_in		 IBA
IDA		 (PMID:15944401), (PMID:22164254), (PMID:22854038) GO_Central
MGI		 PMID:15944401 PMID:22164254 PMID:22854038 GO_REF:0000033 NCBI chr 8:85,598,740...85,614,075
Ensembl chr 8:85,598,740...85,614,850 		JBrowse link
G H SYCE2 synaptonemal complex central element protein 2 located_in
is_active_in		 ISS
IBA
IEA		 HGNC
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr19:12,898,786...12,919,293
Ensembl chr19:12,898,786...12,919,293 		JBrowse link
G N Syce3 synaptonemal complex central element protein 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:204,242...235,081
Ensembl chrNW_004624752:218,587...234,971 		JBrowse link
G G SYCE3 synaptonemal complex central element protein 3 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:33,023,956...33,038,641
Ensembl chr19:33,023,960...33,038,600 		JBrowse link
G P SYCE3 synaptonemal complex central element protein 3 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:168,908...201,037
Ensembl chr 5:181,056...200,832 		JBrowse link
G S Syce3 synaptonemal complex central element protein 3 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936629:264,077...281,119
Ensembl chrNW_004936629:264,077...281,119 		JBrowse link
G D SYCE3 synaptonemal complex central element protein 3 located_in
is_active_in		 ISO
IBA		 (PMID:21637789), (PMID:22164254) UniProt
GO_Central		 PMID:21637789 PMID:22164254 GO_REF:0000033 NCBI chr10:16,748,760...16,772,496
Ensembl chr10:16,758,528...16,772,344 		JBrowse link
G B SYCE3 synaptonemal complex central element protein 3 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:30,797,389...30,809,517
Ensembl chr22:49,908,095...49,913,903 		JBrowse link
G C Syce3 synaptonemal complex central element protein 3 located_in ISO (PMID:21637789), (PMID:22164254) UniProt PMID:21637789 PMID:22164254 NCBI chrNW_004955413:33,537,646...33,573,787
Ensembl chrNW_004955413:33,537,753...33,563,373 		JBrowse link
G R Syce3 synaptonemal complex central element protein 3 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:21637789), (PMID:22164254)		 GO_Central
RGD		 PMID:21637789 PMID:22164254 GO_REF:0000033 NCBI chr 7:120,456,800...120,482,882
Ensembl chr 7:120,456,800...120,482,973 		JBrowse link
G M Syce3 synaptonemal complex central element protein 3 is_active_in
located_in		 IBA
IDA		 (PMID:21637789), (PMID:22164254) GO_Central
UniProt		 PMID:21637789 PMID:22164254 GO_REF:0000033 NCBI chr15:89,274,377...89,294,706
Ensembl chr15:89,274,377...89,294,706 		JBrowse link
G H SYCE3 synaptonemal complex central element protein 3 located_in
is_active_in		 IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr22:50,551,112...50,562,919
Ensembl chr22:50,551,112...50,562,919 		JBrowse link
G N Sycp1 synaptonemal complex protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:10,524,656...10,699,894
Ensembl chrNW_004624772:10,525,203...10,699,560 		JBrowse link
G G SYCP1 synaptonemal complex protein 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:18,712,236...18,827,120
Ensembl chr20:18,712,587...18,823,277 		JBrowse link
G P SYCP1 synaptonemal complex protein 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398 		JBrowse link
G S Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:12584241), (PMID:23133398) MGI PMID:12584241 PMID:23133398 NCBI chrNW_004936627:239,232...365,062 JBrowse link
G D SYCP1 synaptonemal complex protein 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr17:52,538,909...52,681,495
Ensembl chr17:52,539,615...52,648,133 		JBrowse link
G B SYCP1 synaptonemal complex protein 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:87,565,888...87,701,530
Ensembl chr 1:122,614,520...122,754,137 		JBrowse link
G C Sycp1 synaptonemal complex protein 1 located_in ISO (PMID:12584241), (PMID:23133398) MGI PMID:12584241 PMID:23133398 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G R Sycp1 synaptonemal complex protein 1 located_in
is_active_in		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:12584241), (PMID:23133398)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:12584241 PMID:23133398 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G M Sycp1 synaptonemal complex protein 1 is_active_in
located_in		 IBA
IDA		 (PMID:12584241), (PMID:23133398) GO_Central
MGI		 PMID:12584241 PMID:23133398 GO_REF:0000033 NCBI chr 3:102,725,815...102,843,416
Ensembl chr 3:102,725,815...102,843,416 		JBrowse link
G H SYCP1 synaptonemal complex protein 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:114,854,088...114,995,370
Ensembl chr 1:114,854,863...114,995,370 		JBrowse link
G G TEX11 testis expressed 11 located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chr  X:60,378,774...60,698,158 JBrowse link
G G TEX11 testis expressed 11 located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr  X:60,378,787...60,552,856 JBrowse link
G P TEX11 testis expressed 11 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:56,543,933...56,925,104
Ensembl chr  X:56,544,560...56,925,779 		JBrowse link
G S Tex11 testis expressed 11 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936762:681,962...969,749
Ensembl chrNW_004936762:681,130...969,455 		JBrowse link
G D TEX11 testis expressed 11 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:54,958,568...55,268,720
Ensembl chr  X:54,958,568...55,268,684 		JBrowse link
G B TEX11 testis expressed 11 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:59,796,821...60,175,517
Ensembl chr  X:69,877,751...70,233,320 		JBrowse link
G C Tex11 testis expressed 11 located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chrNW_004955475:10,057,708...10,432,087 JBrowse link
G R Tex11 testis expressed 11 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18316482)		 GO_Central
RGD		 PMID:18316482 GO_REF:0000033 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G M Tex11 testis expressed gene 11 is_active_in
located_in		 IBA
IDA		 (PMID:18316482) GO_Central
MGI		 PMID:18316482 GO_REF:0000033 NCBI chr  X:99,882,254...100,103,245
Ensembl chr  X:99,882,254...100,103,273 		JBrowse link
G H TEX11 testis expressed 11 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:70,511,227...70,908,711
Ensembl chr  X:70,528,940...70,908,711 		JBrowse link
G N Tex12 testis expressed 12 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:7,317,642...7,324,128
Ensembl chrNW_004624784:7,317,507...7,322,619 		JBrowse link
G P TEX12 testis expressed 12 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:39,864,093...39,869,572
Ensembl chr 9:39,864,148...39,869,979 		JBrowse link
G S Tex12 testis expressed 12 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936612:2,297,754...2,303,130 JBrowse link
G D TEX12 testis expressed 12 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:20,968,201...20,972,710
Ensembl chr 5:20,968,185...20,972,850 		JBrowse link
G B TEX12 testis expressed 12 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:107,048,417...107,053,655
Ensembl chr11:110,817,016...110,896,829 		JBrowse link
G C Tex12 testis expressed 12 located_in ISO (PMID:16968740), (PMID:22164254), (PMID:22854038) MGI PMID:16968740 PMID:22164254 PMID:22854038 NCBI chrNW_004955412:13,829,637...13,834,481
Ensembl chrNW_004955412:13,831,353...13,834,481 		JBrowse link
G R Tex12 testis expressed 12 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:16968740), (PMID:22164254), (PMID:22854038)		 GO_Central
RGD		 PMID:16968740 PMID:22164254 PMID:22854038 GO_REF:0000033 NCBI chr 8:50,908,161...50,913,202
Ensembl chr 8:50,909,052...50,913,217 		JBrowse link
G M Tex12 testis expressed 12 is_active_in
located_in		 IBA
IDA		 (PMID:16968740), (PMID:22164254), (PMID:22854038) GO_Central
MGI		 PMID:16968740 PMID:22164254 PMID:22854038 GO_REF:0000033 NCBI chr 9:50,468,448...50,472,568
Ensembl chr 9:50,468,119...50,472,625 		JBrowse link
G H TEX12 testis expressed 12 located_in
is_active_in		 ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:112,167,372...112,172,556
Ensembl chr11:112,167,372...112,172,556 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 191127
    cellular anatomical structure 180385
      central element 81
Path 2
Term Annotations click to browse term
  cellular_component 191127
    cellular anatomical structure 180385
      intracellular anatomical structure 140353
        intracellular organelle 125426
          intracellular membrane-bounded organelle 113225
            nucleus 70685
              nuclear lumen 41843
                nuclear chromosome 2285
                  condensed nuclear chromosome 875
                    synaptonemal structure 486
                      synaptonemal complex 486
                        central element 81
paths to the root