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ONTOLOGY REPORT - ANNOTATIONS

Term:mRNA splicing, via spliceosome
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Accession:GO:0000398 term browser browse the term
Definition:The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
Comment:Note that although the many U12-type introns have the sequence AT-AC at the intron termini, some introns with these terminal sequences are spliced by the U2-type spliceosome. The distinguishing characteristics are sequences near the 5' splice site and the branch point sequences of the intron. Note that although the majority of U2-type introns have the sequence GU-AG at the intron termini, some introns with these terminal sequences are spliced by the U12-type spliceosome. The distinguishing characteristics are sequences near the 5' splice site and the branch point sequences of the intron.
Synonyms:exact_synonym: nuclear mRNA splicing, via spliceosome
 narrow_synonym: nuclear mRNA splicing via U12-type spliceosome;   nuclear mRNA splicing via U2-type spliceosome
 broad_synonym: mRNA splicing;   pre-mRNA splicing
 related_synonym: splicing AT-AC intron;   splicing GT-AG intron
 alt_id: GO:0006374;   GO:0006375


show annotations for term's descendants           Sort by:
mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AD000671.2 novel transcript involved_in IEA InterPro GO_REF:0000002 Ensembl chr19:35,739,252...35,745,432 JBrowse link
G AQR aquarius intron-binding spliceosomal factor involved_in IEA
IC
IDA		 (PMID:11991638)
(PMID:28076346)		 InterPro
UniProt		 PMID:11991638 PMID:28076346 GO_REF:0000002 GO_REF:0000104 NCBI chr15:34,851,782...34,969,742
Ensembl chr15:34,851,782...34,969,742 		JBrowse link
G BCAS2 BCAS2 pre-mRNA processing factor involved_in IDA
NAS		 (PMID:28076346)
(PMID:23742842)		 UniProt
ComplexPortal		 PMID:23742842 PMID:28076346 NCBI chr 1:114,567,557...114,581,615
Ensembl chr 1:114,567,557...114,581,629 		JBrowse link
G BUD13 BUD13 homolog involved_in IDA
IEA
IBA
NAS
ISS		 (PMID:29360106)
(PMID:31744343)
(PMID:15565172)		 UniProt
TreeGrafter
GO_Central
ComplexPortal
BHF-UCL		 PMID:15565172 PMID:29360106 PMID:31744343 GO_REF:0000033 GO_REF:0000118 NCBI chr11:116,748,173...116,772,987
Ensembl chr11:116,748,170...116,772,987 		JBrowse link
G BUD31 BUD31 homolog involved_in IDA
IBA		 (PMID:28076346) UniProt
GO_Central		 PMID:28076346 GO_REF:0000033 NCBI chr 7:99,408,969...99,419,616
Ensembl chr 7:99,408,641...99,419,616 		JBrowse link
G C9orf78 chromosome 9 open reading frame 78 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:129,827,290...129,835,275
Ensembl chr 9:129,827,290...129,835,863 		JBrowse link
G CACTIN cactin, spliceosome C complex subunit involved_in IC
IMP		 (PMID:11991638)
(PMID:28062851)		 UniProt PMID:11991638 PMID:28062851 NCBI chr19:3,610,645...3,626,790
Ensembl chr19:3,610,645...3,626,815 		JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in IDA (PMID:29301961) UniProt PMID:29301961 NCBI chr17:40,140,537...40,172,171
Ensembl chr17:40,140,318...40,172,171 		JBrowse link
G CDC40 cell division cycle 40 involved_in IEA
IBA
IC
IMP
IDA		 (PMID:11991638)
(PMID:33220177)
(PMID:28076346)		 InterPro
GO_Central
TreeGrafter
UniProt		 PMID:11991638 PMID:28076346 PMID:33220177 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:110,180,427...110,232,232
Ensembl chr 6:110,180,141...110,254,275 		JBrowse link
G CDC5L cell division cycle 5 like involved_in IC
IEA
IBA
NAS
IDA		 (PMID:11991638)
(PMID:23742842)
(PMID:28076346)		 UniProt
TreeGrafter
GO_Central
InterPro
ComplexPortal		 PMID:11991638 PMID:23742842 PMID:28076346 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:44,387,706...44,450,425
Ensembl chr 6:44,387,706...44,450,425 		JBrowse link
G CENATAC centrosomal AT-AC splicing factor involved_in IMP (PMID:34009673) UniProt PMID:34009673 NCBI chr11:118,998,138...119,015,793
Ensembl chr11:118,998,138...119,015,793 		JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 involved_in IDA
IBA
IEA
IC		 (PMID:28076346)
(PMID:11991638)		 UniProt
GO_Central
TreeGrafter
InterPro		 PMID:11991638 PMID:28076346 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr20:20,034,368...20,056,046
Ensembl chr20:20,034,368...20,056,046 		JBrowse link
G CTNNBL1 catenin beta like 1 involved_in NAS (PMID:23742842) ComplexPortal PMID:23742842 NCBI chr20:37,694,030...37,872,118
Ensembl chr20:37,694,030...37,872,129 		JBrowse link
G CWC15 CWC15 spliceosome associated protein homolog involved_in IEA
NAS
ISS
IDA
IC		 (PMID:23742842)
(PMID:28076346)
(PMID:11991638)		 InterPro
ComplexPortal
UniProt		 PMID:11991638 PMID:23742842 PMID:28076346 GO_REF:0000002 GO_REF:0000024 NCBI chr11:94,962,620...94,973,556
Ensembl chr11:94,962,620...94,973,586 		JBrowse link
G CWC22 CWC22 spliceosome associated protein homolog involved_in IC
IBA
IDA		 (PMID:11991638)
(PMID:29360106)		 UniProt
GO_Central		 PMID:11991638 PMID:29360106 GO_REF:0000033 NCBI chr 2:179,944,876...180,007,297
Ensembl chr 2:179,944,876...180,007,297 		JBrowse link
G CWC25 CWC25 spliceosome associated protein homolog involved_in IDA
IBA
IEA		 (PMID:29301961) UniProt
GO_Central
TreeGrafter		 PMID:29301961 GO_REF:0000033 GO_REF:0000118 NCBI chr17:38,800,441...38,825,321
Ensembl chr17:38,800,441...38,825,355 		JBrowse link
G CWC27 CWC27 spliceosome associated cyclophilin involved_in IC (PMID:29360106)
(PMID:11991638)		 UniProt PMID:11991638 PMID:29360106 NCBI chr 5:64,768,918...65,018,763
Ensembl chr 5:64,766,368...65,102,412 		JBrowse link
G CWF19L1 CWF19 like cell cycle control factor 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:100,232,298...100,267,638
Ensembl chr10:100,232,298...100,267,680 		JBrowse link
G CWF19L2 CWF19 like cell cycle control factor 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:107,326,360...107,457,825
Ensembl chr11:107,326,360...107,457,825 		JBrowse link
G DBR1 debranching RNA lariats 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10982890) Ensembl
MGI
GO_Central		 PMID:10982890 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:138,160,988...138,174,921
Ensembl chr 3:138,160,988...138,174,949 		JBrowse link
G DDX23 DEAD-box helicase 23 involved_in IC
IBA
IEA
TAS
NAS		 (PMID:11991638)
(PMID:30975767)		 UniProt
GO_Central
TreeGrafter
Reactome
ComplexPortal		 PMID:11991638 PMID:30975767 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-72163 NCBI chr12:48,829,756...48,852,163
Ensembl chr12:48,829,756...48,852,842 		JBrowse link
G DDX39A DExD-box helicase 39A involved_in IGI
IEA
IBA		 (PMID:15047853) UniProt
TreeGrafter
GO_Central		 PMID:15047853 GO_REF:0000033 GO_REF:0000118 NCBI chr19:14,408,798...14,419,383
Ensembl chr19:14,408,798...14,419,383 		JBrowse link
G DDX39B DExD-box helicase 39B involved_in IGI
IEA
IBA		 (PMID:15047853) UniProt
TreeGrafter
GO_Central		 PMID:15047853 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:31,530,226...31,542,003
Ensembl chr 6:31,530,219...31,542,448 		JBrowse link
G DDX41 DEAD-box helicase 41 involved_in IC
IBA
IEA
IMP		 (PMID:11991638)
(PMID:25920683)		 UniProt
GO_Central
TreeGrafter
InterPro		 PMID:11991638 PMID:25920683 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:177,511,577...177,516,961
Ensembl chr 5:177,511,577...177,516,961 		JBrowse link
G DDX46 DEAD-box helicase 46 involved_in NAS
IBA
IDA
TAS		 (PMID:31744343)
(PMID:32494006), (PMID:34822310), (PMID:36797247)		 ComplexPortal
GO_Central
UniProt
Reactome		 PMID:31744343 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000033 Reactome:R-HSA-72163 NCBI chr 5:134,758,779...134,831,121
Ensembl chr 5:134,758,771...134,855,133 		JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199 		JBrowse link
G DHX15 DEAH-box helicase 15 involved_in TAS Reactome Reactome:R-HSA-72163 NCBI chr 4:24,527,475...24,584,554
Ensembl chr 4:24,517,441...24,584,554 		JBrowse link
G DHX16 DEAH-box helicase 16 involved_in IMP
TAS
IDA		 (PMID:20423332), (PMID:25296192)
(PMID:29360106)		 UniProt
Reactome		 PMID:20423332 PMID:25296192 PMID:29360106 Reactome:R-HSA-72163 NCBI chr 6:30,653,127...30,673,006
Ensembl chr 6:30,653,119...30,673,006 		JBrowse link
G DHX35 DEAH-box helicase 35 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr20:38,962,344...39,039,721
Ensembl chr20:38,962,299...39,039,723 		JBrowse link
G DHX38 DEAH-box helicase 38 involved_in IC
IEA
IBA
TAS
IDA		 (PMID:11991638)
(PMID:9524131)		 UniProt
TreeGrafter
GO_Central
Reactome		 PMID:9524131 PMID:11991638 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-72163 NCBI chr16:72,093,847...72,112,912
Ensembl chr16:72,093,613...72,112,912 		JBrowse link
G DHX8 DEAH-box helicase 8 involved_in IDA
TAS
IC
IEA		 (PMID:28076346)
(PMID:11991638)		 UniProt
Reactome
InterPro		 PMID:11991638 PMID:28076346 GO_REF:0000002 Reactome:R-HSA-72163 NCBI chr17:43,483,975...43,544,799
Ensembl chr17:43,483,865...43,610,338 		JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 involved_in IDA
IBA
IEA
NAS		 (PMID:28076346)
(PMID:30975767)		 UniProt
GO_Central
TreeGrafter
ComplexPortal		 PMID:28076346 PMID:30975767 GO_REF:0000033 GO_REF:0000118 NCBI chr17:44,849,948...44,899,445
Ensembl chr17:44,849,948...44,899,445 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in IC
IBA
IDA		 (PMID:11991638)
(PMID:29301961)		 UniProt
GO_Central		 PMID:11991638 PMID:29301961 GO_REF:0000033 NCBI chr17:80,134,369...80,147,128
Ensembl chr17:80,134,369...80,147,151 		JBrowse link
G ESS2 ess-2 splicing factor homolog involved_in IC
IMP		 (PMID:11991638)
(PMID:34694367)		 UniProt PMID:11991638 PMID:34694367 NCBI chr22:19,130,279...19,144,651
Ensembl chr22:19,130,279...19,144,684 		JBrowse link
G FRA10AC1 FRA10A associated CGG repeat 1 involved_in IMP (PMID:34694367) UniProt PMID:34694367 NCBI chr10:93,667,883...93,702,959
Ensembl chr10:93,667,883...93,702,592 		JBrowse link
G FRG1 FSHD region gene 1 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 4:189,940,872...189,963,192
Ensembl chr 4:189,940,855...189,963,202 		JBrowse link
G GCFC2 GC-rich sequence DNA-binding factor 2 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:75,662,705...75,713,122
Ensembl chr 2:75,652,000...75,710,985 		JBrowse link
G GEMIN5 gem nuclear organelle associated protein 5 involved_in TAS (PMID:11714716) UniProt PMID:11714716 NCBI chr 5:154,887,411...154,938,211
Ensembl chr 5:154,887,411...154,938,211 		JBrowse link
G GEMIN6 gem nuclear organelle associated protein 6 involved_in TAS (PMID:11748230) UniProt PMID:11748230 NCBI chr 2:38,778,210...38,785,002
Ensembl chr 2:38,751,534...38,785,002 		JBrowse link
G GEMIN7 gem nuclear organelle associated protein 7 involved_in TAS (PMID:12065586) UniProt PMID:12065586 NCBI chr19:45,075,627...45,091,518
Ensembl chr19:45,079,195...45,091,518 		JBrowse link
G GPATCH1 G-patch domain containing 1 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr19:33,081,181...33,130,542
Ensembl chr19:33,080,899...33,130,542 		JBrowse link
G GPKOW G-patch domain and KOW motifs involved_in IMP
IBA
IEA		 (PMID:25296192) UniProt
GO_Central
InterPro		 PMID:25296192 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:49,113,407...49,123,735
Ensembl chr  X:49,113,407...49,123,735 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in IC
IEA
IBA		 (PMID:9731529)
(PMID:11991638)		 HGNC-UCL
TreeGrafter
GO_Central
UniProt		 PMID:9731529 PMID:11991638 GO_REF:0000033 GO_REF:0000118 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088 		JBrowse link
G HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1 like 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:52,617,525...52,643,773
Ensembl chr13:52,642,431...52,643,773 		JBrowse link
G HNRNPA1L3 heterogeneous nuclear ribonucleoprotein A1 like 3 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:51,645,757...51,647,079
Ensembl chr16:51,553,436...51,647,132 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IMP
IEA
IBA
IC		 (PMID:26321680)
(PMID:11991638)
(PMID:9731529)		 UniProt
TreeGrafter
GO_Central
HGNC-UCL		 PMID:9731529 PMID:11991638 PMID:26321680 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:26,189,927...26,200,746
Ensembl chr 7:26,171,151...26,201,529 		JBrowse link
G HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 involved_in IC
IEA
IBA		 (PMID:11991638) UniProt
TreeGrafter
GO_Central		 PMID:11991638 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:177,212,794...177,223,959
Ensembl chr 2:177,212,694...177,223,959 		JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in IC
IMP		 (PMID:9731529)
(PMID:25719671)
(PMID:11991638)		 HGNC-UCL
UniProt		 PMID:9731529 PMID:11991638 PMID:25719671 NCBI chr14:21,209,147...21,269,442
Ensembl chr14:21,209,136...21,269,494 		JBrowse link
G HNRNPF heterogeneous nuclear ribonucleoprotein F involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr10:43,385,618...43,409,186
Ensembl chr10:43,385,617...43,409,186 		JBrowse link
G HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 5:179,614,178...179,634,784
Ensembl chr 5:179,614,178...179,634,784 		JBrowse link
G HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 involved_in NAS (PMID:10858537) UniProt PMID:10858537 NCBI chr10:68,331,693...68,343,196
Ensembl chr10:68,331,174...68,343,193 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631 		JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M involved_in IC (PMID:9731529)
(PMID:11991638)		 HGNC-UCL
UniProt		 PMID:9731529 PMID:11991638 NCBI chr19:8,444,975...8,489,114
Ensembl chr19:8,444,767...8,489,114 		JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 1:23,304,688...23,344,284
Ensembl chr 1:23,303,771...23,344,336 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in NAS (PMID:23742842) ComplexPortal PMID:23742842 NCBI chr11:123,057,489...123,062,462
Ensembl chr11:123,057,489...123,063,230 		JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 involved_in IEA
IDA
NAS		 (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:31744343)		 InterPro
UniProt
ComplexPortal		 PMID:31744343 PMID:32494006 PMID:34822310 PMID:36797247 GO_REF:0000002 NCBI chr  X:136,497,229...136,512,346
Ensembl chr  X:136,497,079...136,512,346 		JBrowse link
G IK IK cytokine involved_in IDA
IBA
IEA		 (PMID:28781166) UniProt
GO_Central
TreeGrafter		 PMID:28781166 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:140,647,829...140,662,480
Ensembl chr 5:140,647,058...140,662,480 		JBrowse link
G ISY1 ISY1 splicing factor homolog involved_in IC
IDA		 (PMID:11991638)
(PMID:29301961)		 UniProt PMID:11991638 PMID:29301961 NCBI chr 3:129,127,415...129,161,063
Ensembl chr 3:129,127,415...129,161,063 		JBrowse link
G ISY1-RAB43 ISY1-RAB43 readthrough involved_in IDA
IC		 (PMID:29301961)
(PMID:11991638)		 UniProt PMID:11991638 PMID:29301961 NCBI chr 3:129,087,572...129,161,063
Ensembl chr 3:129,087,575...129,161,036 		JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IC
IBA
NAS
IDA		 (PMID:11991638)
(PMID:30975767)
(PMID:28781166)		 UniProt
GO_Central
ComplexPortal		 PMID:11991638 PMID:28781166 PMID:30975767 GO_REF:0000033 NCBI chr 6:31,797,396...31,806,966
Ensembl chr 6:31,797,396...31,806,966 		JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within
involved_in		 IDA
IEA
IBA
NAS
IC		 (PMID:10369684), (PMID:10523320)
(PMID:30975767)
(PMID:28781166)
(PMID:11991638)		 MGI
TreeGrafter
GO_Central
ComplexPortal
InterPro
UniProt		 PMID:10369684 PMID:10523320 PMID:11991638 PMID:28781166 PMID:30975767 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 3:14,178,817...14,201,122
Ensembl chr 3:14,178,817...14,201,122 		JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA
NAS
IDA		 (PMID:30975767)
(PMID:28781166)		 InterPro
ComplexPortal
UniProt		 PMID:28781166 PMID:30975767 GO_REF:0000002 NCBI chr19:18,306,236...18,323,076
Ensembl chr19:18,306,236...18,323,112 		JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IDA
IEA
IBA
NAS		 (PMID:28781166)
(PMID:30975767)		 UniProt
TreeGrafter
GO_Central
ComplexPortal		 PMID:28781166 PMID:30975767 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:32,485,338...32,495,283
Ensembl chr 7:32,485,338...32,495,283 		JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IDA
IBA
NAS
IEA		 (PMID:28781166)
(PMID:30975767)		 UniProt
GO_Central
ComplexPortal
InterPro		 PMID:28781166 PMID:30975767 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:146,175,718...146,191,535
Ensembl chr 4:146,175,703...146,200,000 		JBrowse link
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA
NAS
IDA		 (PMID:30975767)
(PMID:28781166)		 InterPro
ComplexPortal
UniProt		 PMID:28781166 PMID:30975767 GO_REF:0000002 NCBI chr19:2,321,521...2,328,586
Ensembl chr19:2,321,520...2,328,611 		JBrowse link
G LSM8 LSM8 homolog, U6 small nuclear RNA associated involved_in IEA
IBA
NAS
IDA		 (PMID:30975767)
(PMID:28781166)		 InterPro
TreeGrafter
GO_Central
ComplexPortal
UniProt		 PMID:28781166 PMID:30975767 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 7:118,184,164...118,204,035
Ensembl chr 7:118,184,144...118,204,035 		JBrowse link
G MAGOH mago homolog, exon junction complex subunit involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 1:53,226,900...53,238,518
Ensembl chr 1:53,226,900...53,238,518 		JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit involved_in IDA (PMID:28502770) UniProt PMID:28502770 NCBI chr12:10,599,524...10,613,609
Ensembl chr12:10,604,193...10,613,609 		JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IMP (PMID:25719671) UniProt PMID:25719671 NCBI chr 4:118,685,392...118,715,430
Ensembl chr 4:118,685,392...118,715,433 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit NOT|involved_in ISS
IMP		 (PMID:25719671), (PMID:26321680) UniProt PMID:25719671 PMID:26321680 GO_REF:0000024 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342 		JBrowse link
G MFAP1 microfibril associated protein 1 involved_in IDA
IBA		 (PMID:28781166) UniProt
GO_Central		 PMID:28781166 GO_REF:0000033 NCBI chr15:43,804,492...43,824,690
Ensembl chr15:43,804,492...43,824,690 		JBrowse link
G MTREX Mtr4 exosome RNA helicase involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 5:55,307,989...55,425,579
Ensembl chr 5:55,307,989...55,425,579 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in NAS (PMID:23793891) ComplexPortal PMID:23793891 NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748 		JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in NAS
IBA		 (PMID:23793891) ComplexPortal
GO_Central		 PMID:23793891 GO_REF:0000033 NCBI chr 3:196,935,406...196,942,528
Ensembl chr 3:196,935,402...196,942,594 		JBrowse link
G NCBP2L nuclear cap binding protein subunit 2 like involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:107,777,733...107,795,829
Ensembl chr  X:107,774,899...107,795,829 		JBrowse link
G NHP2 NHP2 ribonucleoprotein involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:178,149,463...178,153,885
Ensembl chr 5:178,149,463...178,153,894 		JBrowse link
G NOVA1 NOVA alternative splicing regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10719891) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:10719891 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:26,443,090...26,598,033
Ensembl chr14:26,443,090...26,598,033 		JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:45,933,734...45,973,865
Ensembl chr19:45,933,734...45,974,044 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809 		JBrowse link
G PAXBP1 PAX3 and PAX7 binding protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr21:32,733,899...32,771,755
Ensembl chr21:32,733,899...32,771,792 		JBrowse link
G PHF5A PHD finger protein 5A involved_in IEA
IBA
IDA
NAS		 (PMID:12234937), (PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:31744343)		 InterPro
GO_Central
UniProt
ComplexPortal		 PMID:12234937 PMID:27720643 PMID:29360106 PMID:31744343 PMID:32494006 More... GO_REF:0000002 GO_REF:0000033 NCBI chr22:41,459,717...41,468,692
Ensembl chr22:41,459,717...41,468,692 		JBrowse link
G PLRG1 pleiotropic regulator 1 involved_in IDA
IBA
NAS
IEA
IC		 (PMID:28076346)
(PMID:23742842)
(PMID:11991638)		 UniProt
GO_Central
ComplexPortal
InterPro		 PMID:11991638 PMID:23742842 PMID:28076346 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:154,535,005...154,550,400
Ensembl chr 4:154,535,005...154,550,400 		JBrowse link
G PNN pinin, desmosome associated protein involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr14:39,175,254...39,183,220
Ensembl chr14:39,175,183...39,183,220 		JBrowse link
G PPIE peptidylprolyl isomerase E involved_in IDA
IC		 (PMID:28076346)
(PMID:11991638)		 UniProt PMID:11991638 PMID:28076346 NCBI chr 1:39,738,882...39,763,914
Ensembl chr 1:39,692,182...39,763,914 		JBrowse link
G PPIH peptidylprolyl isomerase H involved_in IC (PMID:9570313) BHF-UCL PMID:9570313 NCBI chr 1:42,658,423...42,681,654
Ensembl chr 1:42,658,335...42,676,758 		JBrowse link
G PPIL1 peptidylprolyl isomerase like 1 involved_in IMP
IDA
IC		 (PMID:33220177)
(PMID:28076346)
(PMID:11991638)		 UniProt PMID:11991638 PMID:28076346 PMID:33220177 NCBI chr 6:36,854,829...36,874,803
Ensembl chr 6:36,854,827...36,874,803 		JBrowse link
G PPIL3 peptidylprolyl isomerase like 3 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 2:200,870,907...200,889,291
Ensembl chr 2:200,870,907...200,889,303 		JBrowse link
G PPP1R8 protein phosphatase 1 regulatory subunit 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:27,830,782...27,851,676
Ensembl chr 1:27,830,782...27,851,676 		JBrowse link
G PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 5:65,563,296...65,587,549
Ensembl chr 5:65,563,236...65,587,549 		JBrowse link
G PRP4K pre-mRNA processing factor kinase PRP4K involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 6:4,021,300...4,064,983
Ensembl chr 6:4,021,267...4,064,983 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IC
IBA
NAS
IEA
IDA		 (PMID:11991638)
(PMID:23742842)
(PMID:20176811)		 UniProt
GO_Central
ComplexPortal
InterPro		 PMID:11991638 PMID:20176811 PMID:23742842 GO_REF:0000002 GO_REF:0000033 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585 		JBrowse link
G PRPF3 pre-mRNA processing factor 3 involved_in IEA
IBA
NAS
IDA		 (PMID:9328476)
(PMID:28781166)		 InterPro
GO_Central
TreeGrafter
UniProt		 PMID:9328476 PMID:28781166 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:150,321,468...150,353,233
Ensembl chr 1:150,321,479...150,353,233 		JBrowse link
G PRPF31 pre-mRNA processing factor 31 involved_in
acts_upstream_of_or_within		 IC
IBA
NAS
IDA
IEA		 (PMID:15257298)
(PMID:30975767)
(PMID:28781166)
(PMID:11867543)		 BHF-UCL
GO_Central
ComplexPortal
UniProt
MGI
InterPro		 PMID:11867543 PMID:15257298 PMID:28781166 PMID:30975767 GO_REF:0000002 GO_REF:0000033 NCBI chr19:54,115,754...54,131,713
Ensembl chr19:54,115,410...54,131,719 		JBrowse link
G PRPF38A pre-mRNA processing factor 38A involved_in IDA
IMP		 (PMID:28781166)
(PMID:26673105)		 UniProt PMID:26673105 PMID:28781166 NCBI chr 1:52,404,602...52,420,836
Ensembl chr 1:52,404,602...52,420,836 		JBrowse link
G PRPF38B pre-mRNA processing factor 38B involved_in IEA UniProt GO_REF:0000104 NCBI chr 1:108,692,310...108,702,928
Ensembl chr 1:108,692,310...108,702,928 		JBrowse link
G PRPF4 pre-mRNA splicing tri-snRNP complex factor PRPF4 involved_in IC
IBA
IEA
NAS
IDA		 (PMID:9570313)
(PMID:30975767)
(PMID:28781166)		 BHF-UCL
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:9570313 PMID:28781166 PMID:30975767 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:113,275,658...113,292,905
Ensembl chr 9:113,275,642...113,294,009 		JBrowse link
G PRPF40A pre-mRNA processing factor 40 homolog A involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:152,651,732...152,718,019
Ensembl chr 2:152,651,593...152,718,012 		JBrowse link
G PRPF40B pre-mRNA processing factor 40 homolog B involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:49,622,646...49,644,665
Ensembl chr12:49,568,218...49,644,666 		JBrowse link
G PRPF6 pre-mRNA processing factor 6 involved_in IC
IBA
NAS
IEA
IDA		 (PMID:10788320)
(PMID:30975767)
(PMID:11991638)
(PMID:21549338), (PMID:28781166)
(PMID:15257298)		 BHF-UCL
GO_Central
ComplexPortal
InterPro
UniProt		 PMID:10788320 PMID:11991638 PMID:15257298 PMID:21549338 PMID:28781166 More... GO_REF:0000002 GO_REF:0000033 NCBI chr20:63,981,132...64,033,100
Ensembl chr20:63,981,132...64,033,100 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 involved_in IC
NAS
IDA
IEA		 (PMID:11991638)
(PMID:30975767)
(PMID:28781166), (PMID:29301961)		 UniProt
ComplexPortal
InterPro		 PMID:11991638 PMID:28781166 PMID:29301961 PMID:30975767 GO_REF:0000002 NCBI chr17:1,650,629...1,684,867
Ensembl chr17:1,650,629...1,684,867 		JBrowse link
G RALY RALY heterogeneous nuclear ribonucleoprotein involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr20:33,993,911...34,084,884
Ensembl chr20:33,993,646...34,108,308 		JBrowse link
G RBM10 RNA binding motif protein 10 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:47,145,221...47,186,813
Ensembl chr  X:47,145,221...47,186,813 		JBrowse link
G RBM14 RNA binding motif protein 14 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr11:66,616,630...66,629,934
Ensembl chr11:66,616,626...66,629,934 		JBrowse link
G RBM14-RBM4 RBM14-RBM4 readthrough involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr11:66,616,630...66,646,468
Ensembl chr11:66,616,626...66,646,469 		JBrowse link
G RBM19 RNA binding motif protein 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:113,816,740...113,966,325
Ensembl chr12:113,816,738...113,966,325 		JBrowse link
G RBM22 RNA binding motif protein 22 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 5:150,690,792...150,701,062
Ensembl chr 5:150,690,792...150,701,077 		JBrowse link
G RBM4 RNA binding motif protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:66,638,703...66,668,380
Ensembl chr11:66,638,667...66,668,374 		JBrowse link
G RBM41 RNA binding motif protein 41 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:107,052,102...107,118,822
Ensembl chr  X:107,052,095...107,118,823 		JBrowse link
G RBM42 RNA binding motif protein 42 involved_in NAS (PMID:30975767) ComplexPortal PMID:30975767 NCBI chr19:35,629,036...35,637,685
Ensembl chr19:35,629,030...35,637,686 		JBrowse link
G RBM44 RNA binding motif protein 44 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:237,798,779...237,842,805
Ensembl chr 2:237,798,389...237,842,808 		JBrowse link
G RBM4B RNA binding motif protein 4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:66,664,998...66,677,887
Ensembl chr11:66,664,998...66,677,887 		JBrowse link
G RBM5 RNA binding motif protein 5 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:50,088,919...50,119,021
Ensembl chr 3:50,088,919...50,119,021 		JBrowse link
G RBM6 RNA binding motif protein 6 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:49,940,150...50,077,249
Ensembl chr 3:49,940,007...50,100,045 		JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IDA
IC		 (PMID:29301961)
(PMID:11991638)		 UniProt PMID:11991638 PMID:29301961 NCBI chr 1:145,921,556...145,927,484
Ensembl chr 1:145,921,556...145,927,678 		JBrowse link
G RBMX RNA binding motif protein X-linked involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr  X:136,869,192...136,880,725
Ensembl chr  X:136,848,004...136,880,764 		JBrowse link
G RBMX2 RNA binding motif protein X-linked 2 involved_in IDA
IEA
IBA
NAS		 (PMID:29360106)
(PMID:31744343)		 UniProt
TreeGrafter
GO_Central
ComplexPortal
InterPro		 PMID:29360106 PMID:31744343 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:130,401,987...130,413,656
Ensembl chr  X:130,401,987...130,413,656 		JBrowse link
G RBMXL2 RBMX like 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:7,088,998...7,091,148
Ensembl chr11:7,088,998...7,091,148 		JBrowse link
G RBMXL3 RBMX like 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:115,189,410...115,192,868
Ensembl chr  X:115,189,410...115,192,868 		JBrowse link
G RNF113A ring finger protein 113A involved_in IDA (PMID:29360106) UniProt PMID:29360106 NCBI chr  X:119,870,475...119,871,733
Ensembl chr  X:119,870,475...119,871,733 		JBrowse link
G RNPC3 RNA binding region (RNP1, RRM) containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:103,525,699...103,555,239
Ensembl chr 1:103,525,691...103,555,239 		JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:2,253,116...2,268,126
Ensembl chr16:2,253,116...2,268,397 		JBrowse link
G RSRC1 arginine and serine rich coiled-coil 1 involved_in IDA (PMID:15798186) UniProt PMID:15798186 NCBI chr 3:158,110,089...158,545,730
Ensembl chr 3:158,105,855...158,545,730 		JBrowse link
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in IC
NAS
IEA
IDA		 (PMID:11991638)
(PMID:30975767)
(PMID:28781166)		 UniProt
ComplexPortal
InterPro		 PMID:11991638 PMID:28781166 PMID:30975767 GO_REF:0000002 NCBI chr11:65,961,734...65,980,137
Ensembl chr11:65,961,728...65,980,137 		JBrowse link
G SART3 spliceosome associated factor 3, U4/U6 recycling protein involved_in IDA
IBA		 (PMID:15314151) UniProt
GO_Central		 PMID:15314151 GO_REF:0000033 NCBI chr12:108,522,214...108,561,173
Ensembl chr12:108,522,214...108,561,400 		JBrowse link
G SF1 splicing factor 1 involved_in IC
NAS
IEA		 (PMID:9731529)
(PMID:17024186)		 HGNC-UCL
ComplexPortal
UniProt		 PMID:9731529 PMID:17024186 GO_REF:0000104 NCBI chr11:64,764,606...64,778,542
Ensembl chr11:64,764,606...64,778,786 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 involved_in IC
IDA
NAS		 (PMID:9731529)
(PMID:10882114), (PMID:29360106), (PMID:32494006), (PMID:36797247)
(PMID:21349847), (PMID:31744343)
(PMID:11991638)		 HGNC-UCL
UniProt
ComplexPortal		 PMID:9731529 PMID:10882114 PMID:11991638 PMID:21349847 PMID:29360106 More... NCBI chr22:30,331,988...30,356,894
Ensembl chr22:30,331,988...30,356,919 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 involved_in IC
IDA
NAS		 (PMID:11991638)
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:21349847), (PMID:31744343)
(PMID:9731529)		 UniProt
ComplexPortal
HGNC-UCL		 PMID:9731529 PMID:11991638 PMID:21349847 PMID:29360106 PMID:31744343 More... NCBI chr19:2,236,824...2,248,655
Ensembl chr19:2,236,824...2,248,655 		JBrowse link
G SF3A3 splicing factor 3a subunit 3 involved_in IC
IBA
IDA
IEA
NAS		 (PMID:11991638)
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:21349847), (PMID:31744343)
(PMID:9731529)		 UniProt
GO_Central
InterPro
ComplexPortal
HGNC-UCL		 PMID:9731529 PMID:11991638 PMID:21349847 PMID:29360106 PMID:31744343 More... GO_REF:0000002 GO_REF:0000033 NCBI chr 1:37,956,975...37,990,022
Ensembl chr 1:37,956,975...37,990,075 		JBrowse link
G SF3B1 splicing factor 3b subunit 1 involved_in
acts_upstream_of_or_within		 IC
IDA
NAS		 (PMID:11991638)
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:31744343), (PMID:9585501)
(PMID:11252167)		 UniProt
MGI		 PMID:9585501 PMID:11252167 PMID:11991638 PMID:27720643 PMID:28781166 More... NCBI chr 2:197,389,784...197,435,093
Ensembl chr 2:197,388,515...197,435,079 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 involved_in IC
IBA
IDA
NAS		 (PMID:11991638)
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:31744343)
(PMID:9731529)		 UniProt
GO_Central
ComplexPortal
HGNC-UCL		 PMID:9731529 PMID:11991638 PMID:27720643 PMID:29360106 PMID:31744343 More... GO_REF:0000033 NCBI chr11:66,052,364...66,069,308
Ensembl chr11:66,050,729...66,069,308 		JBrowse link
G SF3B3 splicing factor 3b subunit 3 involved_in IC
IEA
IBA
IDA
NAS		 (PMID:11991638)
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:31744343)		 UniProt
TreeGrafter
GO_Central
ComplexPortal		 PMID:11991638 PMID:27720643 PMID:28781166 PMID:29360106 PMID:31744343 More... GO_REF:0000033 GO_REF:0000118 NCBI chr16:70,523,816...70,577,668
Ensembl chr16:70,523,791...70,577,670 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 involved_in IC
IDA
NAS		 (PMID:9731529)
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:36797247)
(PMID:31744343)		 HGNC-UCL
ComplexPortal		 PMID:9731529 PMID:27720643 PMID:29360106 PMID:31744343 PMID:32494006 More... NCBI chr 1:149,923,317...149,927,803
Ensembl chr 1:149,923,317...149,927,803 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 involved_in IEA
IBA
IDA
NAS		 (PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:31744343)		 InterPro
GO_Central
UniProt
ComplexPortal		 PMID:27720643 PMID:28781166 PMID:29360106 PMID:31744343 PMID:32494006 More... GO_REF:0000002 GO_REF:0000033 NCBI chr 6:144,094,884...144,095,573
Ensembl chr 6:144,094,884...144,095,573 		JBrowse link
G SF3B6 splicing factor 3b subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA
NAS		 (PMID:23211737)
(PMID:27720643), (PMID:32494006), (PMID:34822310)
(PMID:31744343)		 Ensembl
MGI
GO_Central
UniProt
ComplexPortal		 PMID:23211737 PMID:27720643 PMID:31744343 PMID:32494006 PMID:34822310 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:24,067,586...24,076,326
Ensembl chr 2:24,067,586...24,076,373 		JBrowse link
G SLU7 SLU7 homolog, splicing factor involved_in IEA
IC		 (PMID:11991638) UniProt
InterPro		 PMID:11991638 GO_REF:0000002 GO_REF:0000104 NCBI chr 5:160,401,641...160,419,081
Ensembl chr 5:160,401,641...160,421,711 		JBrowse link
G SMU1 SMU1 DNA replication regulator and spliceosomal factor involved_in IDA
IEA		 (PMID:28781166) UniProt
InterPro		 PMID:28781166 GO_REF:0000002 NCBI chr 9:33,041,765...33,076,674
Ensembl chr 9:33,041,765...33,076,674 		JBrowse link
G SNIP1 Smad nuclear interacting protein 1 involved_in IDA
IEA
NAS		 (PMID:29360106)
(PMID:31744343)		 UniProt
TreeGrafter
ComplexPortal		 PMID:29360106 PMID:31744343 GO_REF:0000118 NCBI chr 1:37,534,449...37,554,293
Ensembl chr 1:37,534,449...37,554,293 		JBrowse link
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 involved_in IDA
TAS
NAS
IC		 (PMID:29301961), (PMID:8670905)
(PMID:30975767)
(PMID:11991638)		 UniProt
Reactome
ComplexPortal		 PMID:8670905 PMID:11991638 PMID:29301961 PMID:30975767 Reactome:R-HSA-72163 NCBI chr 2:96,274,338...96,305,546
Ensembl chr 2:96,274,338...96,321,271 		JBrowse link
G SNRNP25 small nuclear ribonucleoprotein U11/U12 subunit 25 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:53,828...57,669
Ensembl chr16:53,828...57,669 		JBrowse link
G SNRNP27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 involved_in NAS (PMID:30975767) ComplexPortal PMID:30975767 NCBI chr 2:69,893,956...69,905,236
Ensembl chr 2:69,893,956...69,905,575 		JBrowse link
G SNRNP35 small nuclear ribonucleoprotein U11/U12 subunit 35 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:123,458,139...123,473,154
Ensembl chr12:123,458,088...123,473,154 		JBrowse link
G SNRNP40 small nuclear ribonucleoprotein U5 subunit 40 involved_in IC
NAS		 (PMID:11991638)
(PMID:30975767)		 UniProt
ComplexPortal		 PMID:11991638 PMID:30975767 NCBI chr 1:31,259,568...31,296,788
Ensembl chr 1:31,259,568...31,296,788 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 involved_in IDA
IBA
IEA
NAS
IC		 (PMID:9531537)
(PMID:33677607)
(PMID:9731529)		 UniProt
GO_Central
TreeGrafter
ComplexPortal
HGNC-UCL		 PMID:9531537 PMID:9731529 PMID:33677607 GO_REF:0000033 GO_REF:0000118 NCBI chr19:49,085,451...49,108,604
Ensembl chr19:49,085,419...49,108,605 		JBrowse link
G SNRPA small nuclear ribonucleoprotein polypeptide A involved_in IC
IEA
IBA
NAS		 (PMID:9731529)
(PMID:30975767), (PMID:33677607)		 HGNC-UCL
TreeGrafter
GO_Central
ComplexPortal		 PMID:9731529 PMID:30975767 PMID:33677607 GO_REF:0000033 GO_REF:0000118 NCBI chr19:40,751,203...40,765,389
Ensembl chr19:40,750,637...40,765,389 		JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' involved_in IC
IEA
IBA
IDA
NAS		 (PMID:11991638)
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
(PMID:31744343)
(PMID:9731529)		 UniProt
TreeGrafter
GO_Central
ComplexPortal
HGNC-UCL		 PMID:9731529 PMID:11991638 PMID:28076346 PMID:28781166 PMID:31744343 More... GO_REF:0000033 GO_REF:0000118 NCBI chr15:101,281,510...101,295,248
Ensembl chr15:101,281,510...101,295,282 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 involved_in IC
IEA
IBA
IDA
NAS		 (PMID:11991638)
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
(PMID:15564372), (PMID:2524838), (PMID:30975767), (PMID:31744343), (PMID:33677607)		 UniProt
TreeGrafter
GO_Central
ComplexPortal		 PMID:2524838 PMID:11991638 PMID:15564372 PMID:28076346 PMID:28781166 More... GO_REF:0000033 GO_REF:0000118 NCBI chr20:2,461,642...2,470,789
Ensembl chr20:2,461,634...2,470,853 		JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 involved_in IC
IEA
IBA
IDA
NAS		 (PMID:11991638)
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
(PMID:31744343)
(PMID:9731529)
(PMID:2951739)		 UniProt
TreeGrafter
GO_Central
ComplexPortal
HGNC-UCL		 PMID:2951739 PMID:9731529 PMID:11991638 PMID:28076346 PMID:28781166 More... GO_REF:0000033 GO_REF:0000118 NCBI chr20:16,730,026...16,742,564
Ensembl chr20:16,729,961...16,742,564 		JBrowse link
G SNRPC small nuclear ribonucleoprotein polypeptide C involved_in IEA
NAS
IDA		 (PMID:33677607)
(PMID:8972845)		 InterPro
ComplexPortal
UniProt		 PMID:8972845 PMID:33677607 GO_REF:0000002 NCBI chr 6:34,757,505...34,773,857
Ensembl chr 6:34,757,505...34,773,857 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide involved_in IC
IDA
NAS		 (PMID:11991638)
(PMID:28076346), (PMID:32494006), (PMID:36797247)
(PMID:15564372), (PMID:30975767), (PMID:31744343), (PMID:33677607)		 UniProt
ComplexPortal		 PMID:11991638 PMID:15564372 PMID:28076346 PMID:30975767 PMID:31744343 More... NCBI chr18:21,612,314...21,633,520
Ensembl chr18:21,612,314...21,633,524 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide involved_in IC
IDA
NAS		 (PMID:11991638)
(PMID:28076346), (PMID:32494006), (PMID:36797247)
(PMID:15564372), (PMID:30975767), (PMID:31744343), (PMID:33677607)		 UniProt
ComplexPortal		 PMID:11991638 PMID:15564372 PMID:28076346 PMID:30975767 PMID:31744343 More... NCBI chr19:45,687,454...45,692,316
Ensembl chr19:45,687,460...45,692,569 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide involved_in IC
IDA
NAS		 (PMID:11991638)
(PMID:28076346), (PMID:32494006), (PMID:36797247)
(PMID:15564372), (PMID:30975767), (PMID:31744343), (PMID:33677607)		 UniProt
ComplexPortal		 PMID:11991638 PMID:15564372 PMID:28076346 PMID:30975767 PMID:31744343 More... NCBI chr22:24,555,650...24,574,971
Ensembl chr22:24,555,958...24,582,052 		JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E involved_in IEA
IDA
NAS
IC		 (PMID:28076346), (PMID:32494006), (PMID:36797247)
(PMID:15564372), (PMID:30975767), (PMID:31744343), (PMID:33677607)
(PMID:11991638)		 InterPro
UniProt
ComplexPortal		 PMID:11991638 PMID:15564372 PMID:28076346 PMID:30975767 PMID:31744343 More... GO_REF:0000002 NCBI chr 1:203,861,599...203,871,152
Ensembl chr 1:203,861,599...203,871,152 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F involved_in IEA
IBA
IDA
NAS
IC		 (PMID:28076346), (PMID:32494006), (PMID:36797247)
(PMID:15564372), (PMID:30975767), (PMID:31744343), (PMID:33677607)
(PMID:11991638)		 InterPro
GO_Central
UniProt
ComplexPortal		 PMID:11991638 PMID:15564372 PMID:28076346 PMID:30975767 PMID:31744343 More... GO_REF:0000002 GO_REF:0000033 NCBI chr12:95,858,952...95,866,140
Ensembl chr12:95,858,952...95,903,828 		JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G involved_in IEA
IBA
IDA
NAS
IC		 (PMID:28076346), (PMID:32494006), (PMID:36797247)
(PMID:15564372), (PMID:30975767), (PMID:31744343), (PMID:33677607)
(PMID:11991638)		 UniProt
GO_Central
ComplexPortal		 PMID:11991638 PMID:15564372 PMID:28076346 PMID:30975767 PMID:31744343 More... GO_REF:0000033 GO_REF:0000104 NCBI chr 2:70,281,362...70,293,740
Ensembl chr 2:70,281,362...70,293,740 		JBrowse link
G SNRPGP15 small nuclear ribonucleoprotein polypeptide G pseudogene 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:14,489,297...14,489,890
Ensembl chr19:14,489,388...14,489,609 		JBrowse link
G SNRPN small nuclear ribonucleoprotein polypeptide N involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:24,823,637...24,978,723
Ensembl chr15:24,823,637...24,978,723 		JBrowse link
G SNU13 small nuclear ribonucleoprotein 13 involved_in IDA
IBA
IEA
NAS		 (PMID:28781166)
(PMID:30975767)		 UniProt
GO_Central
TreeGrafter
ComplexPortal		 PMID:28781166 PMID:30975767 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr22:41,673,933...41,690,480
Ensembl chr22:41,673,933...41,690,504 		JBrowse link
G SNURF SNRPN upstream open reading frame involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:24,954,987...24,978,723
Ensembl chr15:24,954,987...24,977,850 		JBrowse link
G SNW1 SNW domain containing 1 involved_in IC
IDA
IEA		 (PMID:11991638)
(PMID:15194481), (PMID:28076346)		 UniProt
InterPro		 PMID:11991638 PMID:15194481 PMID:28076346 GO_REF:0000002 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207 		JBrowse link
G SRRM1 serine and arginine repetitive matrix 1 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 1:24,643,302...24,673,281
Ensembl chr 1:24,631,716...24,673,281 		JBrowse link
G SRRM2 serine/arginine repetitive matrix 2 involved_in IDA
IC		 (PMID:28076346)
(PMID:11991638)		 UniProt PMID:11991638 PMID:28076346 NCBI chr16:2,752,638...2,771,412
Ensembl chr16:2,752,626...2,772,538 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr17:57,989,038...58,007,246
Ensembl chr17:58,000,919...58,007,346 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IDA
IBA
IEA		 (PMID:9774382) UniProt
GO_Central
TreeGrafter		 PMID:9774382 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:23,964,347...23,980,327
Ensembl chr 1:23,964,347...23,980,927 		JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:89,095,959...89,118,071
Ensembl chr 6:89,095,959...89,118,071 		JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:76,734,115...76,737,411
Ensembl chr17:76,734,115...76,737,333 		JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:36,594,362...36,605,600
Ensembl chr 6:36,594,353...36,605,600 		JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:29,147,743...29,181,900
Ensembl chr 1:29,147,743...29,181,900 		JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:69,767,142...69,772,005
Ensembl chr14:69,726,900...69,772,005 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:43,457,896...43,464,243
Ensembl chr20:43,457,893...43,466,046 		JBrowse link
G SRSF7 serine and arginine rich splicing factor 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:38,743,599...38,751,494
Ensembl chr 2:38,743,599...38,751,494 		JBrowse link
G SRSF8 serine and arginine rich splicing factor 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:95,066,877...95,071,225
Ensembl chr11:95,066,919...95,071,225 		JBrowse link
G SYF2 SYF2 pre-mRNA splicing factor involved_in IC
IEA
IDA		 (PMID:11991638)
(PMID:28076346)		 UniProt PMID:11991638 PMID:28076346 GO_REF:0000104 NCBI chr 1:25,222,276...25,232,502
Ensembl chr 1:25,222,276...25,232,502 		JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 6:85,607,784...85,643,870
Ensembl chr 6:85,607,779...85,644,063 		JBrowse link
G TFIP11 tuftelin interacting protein 11 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr22:26,491,240...26,512,473
Ensembl chr22:26,491,225...26,512,505 		JBrowse link
G TRA2A transformer 2 alpha homolog involved_in IDA (PMID:9546399) UniProt PMID:9546399 NCBI chr 7:23,504,780...23,531,981
Ensembl chr 7:23,504,780...23,532,041 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in
acts_upstream_of		 IDA
ISO
IEA		 (PMID:9546399)
(PMID:22194695)		 UniProt
MGI
Ensembl		 PMID:9546399 PMID:22194695 GO_REF:0000107 NCBI chr 3:185,914,558...185,938,014
Ensembl chr 3:185,914,558...185,938,103 		JBrowse link
G TXNL4A thioredoxin like 4A involved_in IEA
NAS
IDA		 (PMID:30975767)
(PMID:28781166)		 InterPro
ComplexPortal
UniProt		 PMID:28781166 PMID:30975767 GO_REF:0000002 NCBI chr18:79,970,813...80,033,936
Ensembl chr18:79,970,813...80,033,949 		JBrowse link
G TXNL4B thioredoxin like 4B involved_in IEA InterPro GO_REF:0000002 NCBI chr16:72,084,857...72,094,378
Ensembl chr16:72,044,289...72,094,431 		JBrowse link
G U2AF1 U2 small nuclear RNA auxiliary factor 1 involved_in IC
IEA
IBA
NAS		 (PMID:9731529)
(PMID:32343311)
(PMID:11991638)		 HGNC-UCL
TreeGrafter
GO_Central
ComplexPortal
UniProt
InterPro		 PMID:9731529 PMID:11991638 PMID:32343311 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr21:43,092,956...43,107,578
Ensembl chr21:43,092,956...43,107,570 		JBrowse link
G U2AF1L4 U2 small nuclear RNA auxiliary factor 1 like 4 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr19:35,742,464...35,745,418
Ensembl chr19:35,742,464...35,745,445 		JBrowse link
G U2AF1L5 U2 small nuclear RNA auxiliary factor 1 like 5 involved_in IC
IEA
IBA
NAS		 (PMID:11991638)
(PMID:32343311)
(PMID:9731529)		 UniProt
TreeGrafter
GO_Central
ComplexPortal
InterPro
HGNC-UCL		 PMID:9731529 PMID:11991638 PMID:32343311 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr21:6,484,623...6,499,248
Ensembl chr21:43,092,956...43,107,570 		JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 involved_in IDA
NAS
IC		 (PMID:1824937)
(PMID:17024186), (PMID:32343311)
(PMID:9731529)		 GO_Central
ComplexPortal
HGNC-UCL		 PMID:1824937 PMID:9731529 PMID:17024186 PMID:32343311 NCBI chr19:55,655,035...55,674,716
Ensembl chr19:55,654,146...55,674,716 		JBrowse link
G UBL5 ubiquitin like 5 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:9,827,918...9,830,115
Ensembl chr19:9,827,892...9,830,115 		JBrowse link
G USP39 ubiquitin specific peptidase 39 involved_in IDA
NAS		 (PMID:11350945)
(PMID:30975767)		 UniProt
ComplexPortal		 PMID:11350945 PMID:30975767 NCBI chr 2:85,602,861...85,649,283
Ensembl chr 2:85,602,856...85,649,283 		JBrowse link
G USP49 ubiquitin specific peptidase 49 involved_in IMP (PMID:23824326) UniProt PMID:23824326 NCBI chr 6:41,789,896...41,895,375
Ensembl chr 6:41,789,896...41,895,375 		JBrowse link
G WBP4 WW domain binding protein 4 involved_in IDA
IEA		 (PMID:28781166) UniProt
InterPro		 PMID:28781166 GO_REF:0000002 NCBI chr13:41,061,509...41,084,006
Ensembl chr13:41,061,509...41,084,006 		JBrowse link
G WDR83 WD repeat domain 83 involved_in IC
IBA
IDA		 (PMID:11991638) UniProt
GO_Central		 PMID:11991638 GO_REF:0000033 NCBI chr19:12,666,807...12,675,832
Ensembl chr19:12,666,802...12,675,832 		JBrowse link
G XAB2 XPA binding protein 2 involved_in IEA
IBA
IDA
IC		 (PMID:28076346)
(PMID:11991638)		 InterPro
GO_Central
TreeGrafter
UniProt		 PMID:11991638 PMID:28076346 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr19:7,619,525...7,629,545
Ensembl chr19:7,619,525...7,629,545 		JBrowse link
G YJU2 YJU2 splicing factor homolog involved_in IEA InterPro GO_REF:0000002 NCBI chr19:4,247,080...4,269,088
Ensembl chr19:4,247,080...4,269,088 		JBrowse link
G YJU2B YJU2 splicing factor homolog B involved_in IEA InterPro GO_REF:0000002 NCBI chr19:13,731,752...13,763,289
Ensembl chr19:13,731,760...13,763,296 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
IBA		 RGD
GO_Central		 PMID:10564280 GO_REF:0000033 RGD:634512 NCBI chr 4:68,310,387...68,350,090
Ensembl chr 4:68,310,387...68,350,090 		JBrowse link
G ZCCHC8 zinc finger CCHC-type containing 8 involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr12:122,471,600...122,500,932
Ensembl chr12:122,471,600...122,500,932 		JBrowse link
G ZCRB1 zinc finger CCHC-type and RNA binding motif containing 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:42,312,086...42,326,094
Ensembl chr12:42,312,086...42,326,257 		JBrowse link
G ZMAT2 zinc finger matrin-type 2 involved_in IDA
IBA
IEA		 (PMID:28781166) UniProt
GO_Central
InterPro		 PMID:28781166 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:140,700,447...140,706,686
Ensembl chr 5:140,698,680...140,706,686 		JBrowse link
G ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 involved_in IMP
IEA
IBA
ISO		 (PMID:9237760) UniProt
TreeGrafter
GO_Central
RGD
InterPro		 PMID:9237760 PMID:33691379 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 RGD:151232289 NCBI chr  X:15,790,484...15,823,260
Ensembl chr  X:15,790,156...15,830,694 		JBrowse link
G ZRSR2P1 ZRSR2 pseudogene 1 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:112,891,628...112,893,097
Ensembl chr 5:112,891,610...112,893,079 		JBrowse link
alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK13 cyclin dependent kinase 13 involved_in ISS
TAS
IEA		 (PMID:16721827) UniProt
Ensembl		 PMID:16721827 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:39,950,256...40,099,580
Ensembl chr 7:39,950,121...40,099,580 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 acts_upstream_of_or_within IDA (PMID:19720736) MGI PMID:19720736 NCBI chr18:37,242,844...37,565,798
Ensembl chr18:37,243,040...37,565,827 		JBrowse link
G DDX17 DEAD-box helicase 17 involved_in IMP
IBA
IEA		 (PMID:24275493), (PMID:24910439) UniProt
GO_Central
TreeGrafter		 PMID:24275493 PMID:24910439 GO_REF:0000033 GO_REF:0000118 NCBI chr22:38,483,438...38,506,311
Ensembl chr22:38,483,438...38,507,660 		JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IMP
IBA
IEA		 (PMID:24275493), (PMID:24910439) UniProt
GO_Central
TreeGrafter		 PMID:24275493 PMID:24910439 GO_REF:0000033 GO_REF:0000118 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IMP (PMID:28221134) UniProt PMID:28221134 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982 		JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO (PMID:26371508) MGI PMID:26371508 NCBI chr 8:94,641,174...94,707,466
Ensembl chr 8:94,641,074...94,707,466 		JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26371508) Ensembl
MGI		 PMID:26371508 GO_REF:0000107 NCBI chr16:68,229,033...68,236,127
Ensembl chr16:68,229,033...68,238,102 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 acts_upstream_of_or_within ISO (PMID:15798186) MGI PMID:15798186 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088 		JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M involved_in IMP (PMID:19874820) BHF-UCL PMID:19874820 NCBI chr19:8,444,975...8,489,114
Ensembl chr19:8,444,767...8,489,114 		JBrowse link
G MBNL1 muscleblind like splicing regulator 1 acts_upstream_of_or_within ISO (PMID:19075228)
(PMID:19720736)		 MGI PMID:19075228 PMID:19720736 NCBI chr 3:152,243,632...152,465,780
Ensembl chr 3:152,243,828...152,465,780 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in NAS (PMID:21536667) ComplexPortal PMID:21536667 NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748 		JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in NAS (PMID:21536667) ComplexPortal PMID:21536667 NCBI chr 3:196,935,406...196,942,528
Ensembl chr 3:196,935,402...196,942,594 		JBrowse link
G PQBP1 polyglutamine binding protein 1 involved_in IEA
IBA
IMP		 (PMID:23512658) Ensembl
GO_Central
UniProt		 PMID:23512658 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:48,897,930...48,903,143
Ensembl chr  X:48,890,197...48,903,402 		JBrowse link
G PUF60 poly(U) binding splicing factor 60 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:143,816,344...143,829,315
Ensembl chr 8:143,816,344...143,830,709 		JBrowse link
G RBM17 RNA binding motif protein 17 involved_in IMP
IBA
IEA		 (PMID:17589525) UniProt
GO_Central
TreeGrafter		 PMID:17589525 GO_REF:0000033 GO_REF:0000118 NCBI chr10:6,089,034...6,117,447
Ensembl chr10:6,089,034...6,117,457 		JBrowse link
G RSRC1 arginine and serine rich coiled-coil 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15798186) Ensembl
MGI
GO_Central
InterPro		 PMID:15798186 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:158,110,089...158,545,730
Ensembl chr 3:158,105,855...158,545,730 		JBrowse link
G SCNM1 sodium channel modifier 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:151,156,649...151,170,296
Ensembl chr 1:151,156,664...151,170,296 		JBrowse link
G SCNM1 sodium channel modifier 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:151,166,144...151,170,296
Ensembl chr 1:151,156,664...151,170,296 		JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in IMP
IBA
IEA		 (PMID:19874820) BHF-UCL
GO_Central
TreeGrafter		 PMID:19874820 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446 		JBrowse link
G SFSWAP splicing factor SWAP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8940107) Ensembl
MGI		 PMID:8940107 GO_REF:0000107 NCBI chr12:131,711,090...131,799,738
Ensembl chr12:131,711,081...131,799,738 		JBrowse link
G SLU7 SLU7 homolog, splicing factor involved_in IDA (PMID:15728250) HGNC-UCL PMID:15728250 NCBI chr 5:160,401,641...160,419,081
Ensembl chr 5:160,401,641...160,421,711 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO
IBA
IEA
IDA		 (PMID:8940107) RGD
GO_Central
Ensembl		 PMID:8940107 PMID:23462647 GO_REF:0000033 GO_REF:0000107 RGD:11038736 NCBI chr17:57,989,038...58,007,246
Ensembl chr17:58,000,919...58,007,346 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 involved_in IDA (PMID:22767602) UniProt PMID:22767602 NCBI chr20:43,457,896...43,464,243
Ensembl chr20:43,457,893...43,466,046 		JBrowse link
G SRSF9 serine and arginine rich splicing factor 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:120,461,672...120,469,748
Ensembl chr12:120,461,672...120,495,946 		JBrowse link
G STRAP serine/threonine kinase receptor associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,882,387...15,903,478
Ensembl chr12:15,882,387...15,903,478 		JBrowse link
cis assembly of pre-catalytic spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX23 DEAD-box helicase 23 involved_in IC (PMID:9539711) HGNC-UCL PMID:9539711 NCBI chr12:48,829,756...48,852,163
Ensembl chr12:48,829,756...48,852,842 		JBrowse link
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 involved_in IC (PMID:9539711) HGNC-UCL PMID:9539711 NCBI chr 2:96,274,338...96,305,546
Ensembl chr 2:96,274,338...96,321,271 		JBrowse link
formation of quadruple SL/U4/U5/U6 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNU4-1 RNA, U4 small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr12:120,293,094...120,293,237
Ensembl chr12:120,293,097...120,293,237 		JBrowse link
G RNU4-2 RNA, U4 small nuclear 2 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr12:120,291,763...120,291,903
Ensembl chr12:120,291,763...120,291,903 		JBrowse link
G RNU5A-1 RNA, U5A small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr15:65,296,051...65,296,167
Ensembl chr15:65,296,051...65,296,166 		JBrowse link
G RNU5B-1 RNA, U5B small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr15:65,304,677...65,304,793
Ensembl chr15:65,304,677...65,304,792 		JBrowse link
G RNU5D-1 RNA, U5D small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:44,731,069...44,731,168
Ensembl chr 1:44,731,055...44,731,170 		JBrowse link
G RNU5E-1 RNA, U5E small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:11,908,154...11,908,272
Ensembl chr 1:11,908,152...11,908,271 		JBrowse link
G RNU5F-1 RNA, U5F small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:44,721,786...44,721,901
Ensembl chr 1:44,721,786...44,721,902 		JBrowse link
G RNU6-1 RNA, U6 small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr15:67,839,940...67,840,045
Ensembl chr15:67,839,939...67,840,045 		JBrowse link
G RNU6-2 RNA, U6 small nuclear 2 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr19:1,021,522...1,021,628
Ensembl chr19:1,021,522...1,021,628 		JBrowse link
G RNU6-7 RNA, U6 small nuclear 7 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr14:32,202,045...32,202,151
Ensembl chr14:32,202,045...32,202,151 		JBrowse link
G RNU6-8 RNA, U6 small nuclear 8 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr14:32,203,163...32,203,269
Ensembl chr14:32,203,163...32,203,269 		JBrowse link
G RNU6-9 RNA, U6 small nuclear 9 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr19:893,484...893,590
Ensembl chr19:893,484...893,590 		JBrowse link
generation of catalytic spliceosome for first transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XAB2 XPA binding protein 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:7,619,525...7,629,545
Ensembl chr19:7,619,525...7,629,545 		JBrowse link
G YJU2 YJU2 splicing factor homolog involved_in IEA UniProt GO_REF:0000104 NCBI chr19:4,247,080...4,269,088
Ensembl chr19:4,247,080...4,269,088 		JBrowse link
generation of catalytic spliceosome for second transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISY1 ISY1 splicing factor homolog involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:129,127,415...129,161,063
Ensembl chr 3:129,127,415...129,161,063 		JBrowse link
G ISY1-RAB43 ISY1-RAB43 readthrough involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:129,087,572...129,161,063
Ensembl chr 3:129,087,575...129,161,036 		JBrowse link
G PRPF18 pre-mRNA processing factor 18 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:13,586,965...13,655,929
Ensembl chr10:13,586,939...13,668,445 		JBrowse link
mRNA 3'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISY1 ISY1 splicing factor homolog involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:129,127,415...129,161,063
Ensembl chr 3:129,127,415...129,161,063 		JBrowse link
G ISY1-RAB43 ISY1-RAB43 readthrough involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:129,087,572...129,161,063
Ensembl chr 3:129,087,575...129,161,036 		JBrowse link
G SF1 splicing factor 1 involved_in TAS (PMID:15647371) HGNC-UCL PMID:15647371 NCBI chr11:64,764,606...64,778,542
Ensembl chr11:64,764,606...64,778,786 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 involved_in TAS (PMID:15647371) HGNC-UCL PMID:15647371 NCBI chr22:30,331,988...30,356,894
Ensembl chr22:30,331,988...30,356,919 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 involved_in TAS (PMID:15647371) HGNC-UCL PMID:15647371 NCBI chr19:2,236,824...2,248,655
Ensembl chr19:2,236,824...2,248,655 		JBrowse link
G SF3A3 splicing factor 3a subunit 3 involved_in TAS (PMID:15647371) HGNC-UCL PMID:15647371 NCBI chr 1:37,956,975...37,990,022
Ensembl chr 1:37,956,975...37,990,075 		JBrowse link
G SLU7 SLU7 homolog, splicing factor involved_in IDA (PMID:15728250) HGNC-UCL PMID:15728250 NCBI chr 5:160,401,641...160,419,081
Ensembl chr 5:160,401,641...160,421,711 		JBrowse link
mRNA 5'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRPF39 pre-mRNA processing factor 39 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:45,084,116...45,116,282
Ensembl chr14:45,084,107...45,116,282 		JBrowse link
G PSIP1 PC4 and SRSF1 interacting protein 1 involved_in IDA (PMID:9885563) UniProt PMID:9885563 NCBI chr 9:15,464,066...15,510,970
Ensembl chr 9:15,464,066...15,510,995 		JBrowse link
G RNU1-1 RNA, U1 small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:16,514,122...16,514,285
Ensembl chr 1:16,514,122...16,514,285 		JBrowse link
G RNU1-2 RNA, U1 small nuclear 2 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:16,895,980...16,896,143
Ensembl chr 1:16,895,980...16,896,143 		JBrowse link
G RNU1-3 RNA, U1 small nuclear 3 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:16,666,785...16,666,948
Ensembl chr 1:16,666,785...16,666,948 		JBrowse link
G RNU1-4 RNA, U1 small nuclear 4 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:16,740,516...16,740,679
Ensembl chr 1:16,740,516...16,740,679 		JBrowse link
G RNU11 RNA, U11 small nuclear involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:28,648,600...28,648,734
Ensembl chr 1:28,648,600...28,648,733 		JBrowse link
G RNU4ATAC RNA, U4atac small nuclear involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 2:121,530,880...121,531,009
Ensembl chr 2:121,530,881...121,531,007 		JBrowse link
G RNU6ATAC RNA, U6atac small nuclear involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 9:134,164,440...134,164,564
Ensembl chr 9:134,164,439...134,164,564 		JBrowse link
G RNVU1-14 RNA, variant U1 small nuclear 14 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:145,281,116...145,281,279
Ensembl chr 1:145,281,116...145,281,279 		JBrowse link
G RNVU1-15 RNA, variant U1 small nuclear 15 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:144,412,576...144,412,740
Ensembl chr 1:144,412,576...144,412,740 		JBrowse link
G RNVU1-17 RNA, variant U1 small nuclear 17 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:143,699,456...143,699,619
Ensembl chr 1:143,699,456...143,699,619 		JBrowse link
G RNVU1-18 RNA, variant U1 small nuclear 18 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:143,729,407...143,729,570
Ensembl chr 1:143,729,407...143,729,570 		JBrowse link
G RNVU1-19 RNA, variant U1 small nuclear 19 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:120,850,819...120,850,985
Ensembl chr 1:120,850,819...120,850,985 		JBrowse link
G RNVU1-20 RNA, variant U1 small nuclear 20 involved_in IEA RNAcentral GO_REF:0000115
G RNVU1-27 RNA, variant U1 small nuclear 27 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:148,522,601...148,522,765
Ensembl chr 1:148,522,601...148,522,765 		JBrowse link
G RNVU1-28 RNA, variant U1 small nuclear 28 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:144,560,666...144,560,829
Ensembl chr 1:144,560,666...144,560,829 		JBrowse link
G RNVU1-2A RNA, variant U1 small nuclear 2A involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:144,551,779...144,551,943
Ensembl chr 1:144,551,779...144,551,943 		JBrowse link
G RNVU1-3 RNA, variant U1 small nuclear 3 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:148,402,715...148,402,875
Ensembl chr 1:148,402,715...148,402,875 		JBrowse link
G RNVU1-31 RNA, variant U1 small nuclear 31 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:145,465,617...145,465,780
Ensembl chr 1:145,465,617...145,465,780 		JBrowse link
G RNVU1-4 RNA, variant U1 small nuclear 4 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:120,942,600...120,942,763
Ensembl chr 1:120,942,600...120,942,763 		JBrowse link
G RNVU1-6 RNA, variant U1 small nuclear 6 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:146,052,081...146,052,244
Ensembl chr 1:146,052,081...146,052,244 		JBrowse link
G RNVU1-7 RNA, variant U1 small nuclear 7 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:148,038,753...148,038,916
Ensembl chr 1:148,038,753...148,038,916 		JBrowse link
G RNVU1-8 RNA, variant U1 small nuclear 8 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:147,084,616...147,084,756
Ensembl chr 1:147,084,616...147,084,756 		JBrowse link
G SFSWAP splicing factor SWAP involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8940107) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:8940107 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:131,711,090...131,799,738
Ensembl chr12:131,711,081...131,799,738 		JBrowse link
G SNRPC small nuclear ribonucleoprotein polypeptide C involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 6:34,757,505...34,773,857
Ensembl chr 6:34,757,505...34,773,857 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in IDA (PMID:8940107), (PMID:9885563) UniProt PMID:8940107 PMID:9885563 NCBI chr17:57,989,038...58,007,246
Ensembl chr17:58,000,919...58,007,346 		JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 involved_in IDA (PMID:11684676) UniProt PMID:11684676 NCBI chr 6:89,095,959...89,118,071
Ensembl chr 6:89,095,959...89,118,071 		JBrowse link
G TAF12-DT TAF12 divergent transcript involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:28,643,256...28,648,801
Ensembl chr 1:28,643,228...28,648,581 		JBrowse link
G WEE2-AS1 WEE2 antisense RNA 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 7:141,704,338...141,738,230
Ensembl chr 7:141,704,003...141,738,346 		JBrowse link
mRNA branch site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100128988 uncharacterized LOC100128988 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr20:40,980,713...41,025,396 JBrowse link
G OVAAL ovarian adenocarcinoma amplified long non-coding RNA involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:180,558,964...180,566,518
Ensembl chr 1:180,509,380...180,566,523 		JBrowse link
G RNU12 RNA, U12 small nuclear involved_in IEA RNAcentral GO_REF:0000115 NCBI chr22:42,615,244...42,615,393
Ensembl chr22:42,615,244...42,615,393 		JBrowse link
G RNU2-1 RNA, U2 small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr17:43,233,790...43,233,977
Ensembl chr17:43,233,787...43,233,977 		JBrowse link
mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C9orf78 chromosome 9 open reading frame 78 involved_in IMP (PMID:35241646) UniProt PMID:35241646 NCBI chr 9:129,827,290...129,835,275
Ensembl chr 9:129,827,290...129,835,863 		JBrowse link
G CACTIN cactin, spliceosome C complex subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:3,610,645...3,626,790
Ensembl chr19:3,610,645...3,626,815 		JBrowse link
G CLNS1A chloride nucleotide-sensitive channel 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:77,614,530...77,637,794
Ensembl chr11:77,514,936...77,637,794 		JBrowse link
G CWC15 CWC15 spliceosome associated protein homolog involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:94,962,620...94,973,556
Ensembl chr11:94,962,620...94,973,586 		JBrowse link
G DCPS decapping enzyme, scavenger involved_in IDA (PMID:18426921) UniProt PMID:18426921 NCBI chr11:126,304,060...126,350,005
Ensembl chr11:126,304,060...126,350,005 		JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in IDA
IEA		 (PMID:18426921) UniProt
InterPro		 PMID:18426921 GO_REF:0000002 NCBI chr 3:196,935,406...196,942,528
Ensembl chr 3:196,935,402...196,942,594 		JBrowse link
G NCBP2L nuclear cap binding protein subunit 2 like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:107,777,733...107,795,829
Ensembl chr  X:107,774,899...107,795,829 		JBrowse link
G PRP4K pre-mRNA processing factor kinase PRP4K involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:4,021,300...4,064,983
Ensembl chr 6:4,021,267...4,064,983 		JBrowse link
G PRPF40A pre-mRNA processing factor 40 homolog A involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:152,651,732...152,718,019
Ensembl chr 2:152,651,593...152,718,012 		JBrowse link
G PRPF40B pre-mRNA processing factor 40 homolog B involved_in IEA InterPro GO_REF:0000002 NCBI chr12:49,622,646...49,644,665
Ensembl chr12:49,568,218...49,644,666 		JBrowse link
G RBM17 RNA binding motif protein 17 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr10:6,089,034...6,117,447
Ensembl chr10:6,089,034...6,117,457 		JBrowse link
G RBM22 RNA binding motif protein 22 involved_in IDA (PMID:22246180) UniProt PMID:22246180 NCBI chr 5:150,690,792...150,701,062
Ensembl chr 5:150,690,792...150,701,077 		JBrowse link
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:65,961,734...65,980,137
Ensembl chr11:65,961,728...65,980,137 		JBrowse link
G SDE2 SDE2 telomere maintenance homolog involved_in IMP (PMID:34365507) UniProt PMID:34365507 NCBI chr 1:225,982,702...225,999,343
Ensembl chr 1:225,982,702...225,999,343 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr22:30,331,988...30,356,894
Ensembl chr22:30,331,988...30,356,919 		JBrowse link
G WBP4 WW domain binding protein 4 involved_in IDA (PMID:19592703) UniProt PMID:19592703 NCBI chr13:41,061,509...41,084,006
Ensembl chr13:41,061,509...41,084,006 		JBrowse link
mRNA splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA
IDA		 (PMID:11158314) UniProt
MGI
GO_Central
Ensembl		 PMID:11158314 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:47,465,937...47,565,539
Ensembl chr11:47,465,933...47,565,569 		JBrowse link
G CELF2 CUGBP Elav-like family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA		 (PMID:11158314) Ensembl
MGI
GO_Central
TreeGrafter
UniProt		 PMID:11158314 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:10,462,550...11,336,675
Ensembl chr10:10,798,397...11,336,675 		JBrowse link
G CELF3 CUGBP Elav-like family member 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:151,700,058...151,716,803
Ensembl chr 1:151,700,058...151,716,803 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11158314) Ensembl
MGI
GO_Central		 PMID:11158314 GO_REF:0000033 GO_REF:0000107 NCBI chr18:37,242,844...37,565,798
Ensembl chr18:37,243,040...37,565,827 		JBrowse link
G CELF5 CUGBP Elav-like family member 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:3,224,661...3,297,076
Ensembl chr19:3,224,661...3,297,076 		JBrowse link
G CELF6 CUGBP Elav-like family member 6 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:72,284,727...72,320,157
Ensembl chr15:72,284,727...72,320,157 		JBrowse link
G FMC1-LUC7L2 FMC1-LUC7L2 readthrough involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:139,341,337...139,423,454
Ensembl chr 7:139,341,360...139,422,599 		JBrowse link
G KHDC4 KH domain containing 4, pre-mRNA splicing factor involved_in IDA (PMID:19641227) UniProt PMID:19641227 NCBI chr 1:155,913,045...155,934,413
Ensembl chr 1:155,913,045...155,934,413 		JBrowse link
G LUC7L LUC7 like involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr16:188,990...229,449
Ensembl chr16:188,969...229,463 		JBrowse link
G LUC7L2 LUC7 like 2, pre-mRNA splicing factor involved_in IEA
IBA		 InterPro
UniProt
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 7:139,340,472...139,423,454
Ensembl chr 7:139,340,359...139,423,457 		JBrowse link
G LUC7L3 LUC7 like 3 pre-mRNA splicing factor involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr17:50,719,603...50,756,219
Ensembl chr17:50,719,565...50,756,219 		JBrowse link
G MBNL1 muscleblind like splicing regulator 1 acts_upstream_of_or_within ISO (PMID:14671308), (PMID:16717059) MGI PMID:14671308 PMID:16717059 NCBI chr 3:152,243,632...152,465,780
Ensembl chr 3:152,243,828...152,465,780 		JBrowse link
G NOL3 nucleolar protein 3 involved_in IDA (PMID:10196175) UniProt PMID:10196175 NCBI chr16:67,170,538...67,175,737
Ensembl chr16:67,170,154...67,175,737 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22802532)
(PMID:10829067)		 Ensembl
MGI		 PMID:10829067 PMID:22802532 GO_REF:0000107 NCBI chr 1:96,721,784...96,823,739
Ensembl chr 1:96,721,665...96,823,738 		JBrowse link
G PUF60 poly(U) binding splicing factor 60 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:143,816,344...143,829,315
Ensembl chr 8:143,816,344...143,830,709 		JBrowse link
G RBMX RNA binding motif protein X-linked ISO RGD PMID:19282290 RGD:2316827 NCBI chr  X:136,869,192...136,880,725
Ensembl chr  X:136,848,004...136,880,764 		JBrowse link
G RBMXL1 RBMX like 1 involved_in ISO PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr 1:88,979,456...88,992,629
Ensembl chr 1:88,979,456...88,992,960 		JBrowse link
G SETX senataxin involved_in IMP (PMID:19515850) UniProt PMID:19515850 NCBI chr 9:132,261,356...132,356,744
Ensembl chr 9:132,261,356...132,354,986 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in TAS (PMID:1830244) PINC PMID:1830244 NCBI chr17:57,989,038...58,007,246
Ensembl chr17:58,000,919...58,007,346 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IDA (PMID:9774382) UniProt PMID:9774382 NCBI chr 1:23,964,347...23,980,327
Ensembl chr 1:23,964,347...23,980,927 		JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 involved_in TAS (PMID:7556075) PINC PMID:7556075 NCBI chr14:69,767,142...69,772,005
Ensembl chr14:69,726,900...69,772,005 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 involved_in TAS
IMP		 (PMID:7556075)
(PMID:12549914)		 PINC
UniProt		 PMID:7556075 PMID:12549914 NCBI chr20:43,457,896...43,464,243
Ensembl chr20:43,457,893...43,466,046 		JBrowse link
G SRSF9 serine and arginine rich splicing factor 9 involved_in TAS (PMID:7556075) PINC PMID:7556075 NCBI chr12:120,461,672...120,469,748
Ensembl chr12:120,461,672...120,495,946 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IDA (PMID:20167602) UniProt PMID:20167602 NCBI chr 4:68,310,387...68,350,090
Ensembl chr 4:68,310,387...68,350,090 		JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACIN1 apoptotic chromatin condensation inducer 1 involved_in IDA (PMID:12665594) UniProt PMID:12665594 NCBI chr14:23,058,564...23,095,614
Ensembl chr14:23,058,564...23,095,614 		JBrowse link
G AKR1C4 aldo-keto reductase family 1 member C4 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr10:5,196,837...5,218,949
Ensembl chr10:5,195,462...5,218,949 		JBrowse link
G C1QBP complement C1q binding protein involved_in IDA
IBA
IEA		 (PMID:10022843) UniProt
GO_Central
TreeGrafter		 PMID:10022843 GO_REF:0000033 GO_REF:0000118 NCBI chr17:5,432,777...5,439,155
Ensembl chr17:5,432,777...5,448,830 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr18:37,242,844...37,565,798
Ensembl chr18:37,243,040...37,565,827 		JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21470964) Ensembl
MGI		 PMID:21470964 GO_REF:0000107 NCBI chr21:37,365,573...37,526,358
Ensembl chr21:37,365,573...37,526,358 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480465) Ensembl
MGI		 PMID:18480465 GO_REF:0000107 NCBI chr 7:26,189,927...26,200,746
Ensembl chr 7:26,171,151...26,201,529 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631 		JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:22570490 RGD:9999428 NCBI chr19:38,836,370...38,852,347
Ensembl chr19:38,836,370...38,852,347 		JBrowse link
G NPM1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16376875) MGI PMID:16376875 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810 		JBrowse link
G PCBP4 poly(rC) binding protein 4 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:23636947) GO_Central
MGI
TreeGrafter		 PMID:23636947 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:51,957,454...51,967,466
Ensembl chr 3:51,957,454...51,974,016 		JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within		 IDA
ISO		 (PMID:15009664)
(PMID:23636947)		 UniProt
MGI		 PMID:15009664 PMID:23636947 NCBI chr19:797,452...812,312
Ensembl chr19:797,075...812,327 		JBrowse link
G PTBP3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr 9:112,217,715...112,379,882
Ensembl chr 9:112,217,716...112,333,664 		JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr  X:47,145,221...47,186,813
Ensembl chr  X:47,145,221...47,186,813 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in ISS
IEA
IDA		 (PMID:24960161), (PMID:34732726) UniProt
Ensembl		 PMID:24960161 PMID:34732726 GO_REF:0000024 GO_REF:0000107 NCBI chr10:110,643,245...110,839,468
Ensembl chr10:110,644,336...110,839,468 		JBrowse link
G RBM42 RNA binding motif protein 42 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr19:35,629,036...35,637,685
Ensembl chr19:35,629,030...35,637,686 		JBrowse link
G RBMX RNA binding motif protein X-linked involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:136,869,192...136,880,725
Ensembl chr  X:136,848,004...136,880,764 		JBrowse link
G RBMXL1 RBMX like 1 involved_in ISO PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr 1:88,979,456...88,992,629
Ensembl chr 1:88,979,456...88,992,960 		JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IDA (PMID:12665594) UniProt PMID:12665594 NCBI chr16:2,253,116...2,268,126
Ensembl chr16:2,253,116...2,268,397 		JBrowse link
G SAP18 Sin3A associated protein 18 involved_in IDA (PMID:12665594) UniProt PMID:12665594 NCBI chr13:21,140,119...21,149,097
Ensembl chr13:21,140,119...21,149,097 		JBrowse link
G SFSWAP splicing factor SWAP involved_in ISS UniProt GO_REF:0000024 NCBI chr12:131,711,090...131,799,738
Ensembl chr12:131,711,081...131,799,738 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IDA
IEA		 (PMID:11684676) UniProt
Ensembl		 PMID:11684676 GO_REF:0000107 NCBI chr 1:23,964,347...23,980,327
Ensembl chr 1:23,964,347...23,980,927 		JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 involved_in ISS (PMID:11684676) UniProt PMID:11684676 NCBI chr 6:89,095,959...89,118,071
Ensembl chr 6:89,095,959...89,118,071 		JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 involved_in IDA (PMID:15009664) UniProt PMID:15009664 NCBI chr 1:29,147,743...29,181,900
Ensembl chr 1:29,147,743...29,181,900 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 involved_in IDA (PMID:15009664) UniProt PMID:15009664 NCBI chr20:43,457,896...43,464,243
Ensembl chr20:43,457,893...43,466,046 		JBrowse link
G SRSF7 serine and arginine rich splicing factor 7 involved_in IDA (PMID:15009664) UniProt PMID:15009664 NCBI chr 2:38,743,599...38,751,494
Ensembl chr 2:38,743,599...38,751,494 		JBrowse link
G SRSF9 serine and arginine rich splicing factor 9 involved_in IDA (PMID:15009664) UniProt PMID:15009664 NCBI chr12:120,461,672...120,469,748
Ensembl chr12:120,461,672...120,495,946 		JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 involved_in IDA (PMID:15009664) UniProt PMID:15009664 NCBI chr19:55,655,035...55,674,716
Ensembl chr19:55,654,146...55,674,716 		JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF1 eukaryotic translation initiation factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr17:41,688,885...41,692,668
Ensembl chr17:41,688,885...41,692,668 		JBrowse link
G EXOSC10 exosome component 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr 1:11,066,618...11,099,869
Ensembl chr 1:11,066,618...11,099,869 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr19:18,831,959...18,868,230
Ensembl chr19:18,831,959...18,868,230 		JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr13:114,281,601...114,305,817
Ensembl chr13:114,281,601...114,305,817 		JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr  X:119,805,311...119,852,963
Ensembl chr  X:119,834,022...119,852,998 		JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF3 CUGBP Elav-like family member 3 involved_in IDA (PMID:15009664) UniProt PMID:15009664 NCBI chr 1:151,700,058...151,716,803
Ensembl chr 1:151,700,058...151,716,803 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 involved_in IDA (PMID:15009664) UniProt PMID:15009664 NCBI chr18:37,242,844...37,565,798
Ensembl chr18:37,243,040...37,565,827 		JBrowse link
G CIRBP cold inducible RNA binding protein involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:1,269,332...1,274,880
Ensembl chr19:1,259,384...1,274,880 		JBrowse link
G CLNS1A chloride nucleotide-sensitive channel 1A involved_in NAS (PMID:11756452) ComplexPortal PMID:11756452 NCBI chr11:77,614,530...77,637,794
Ensembl chr11:77,514,936...77,637,794 		JBrowse link
G DAZAP1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23636947) Ensembl
MGI
GO_Central		 PMID:23636947 GO_REF:0000033 GO_REF:0000107 NCBI chr19:1,407,586...1,435,684
Ensembl chr19:1,407,569...1,435,687 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chr17:80,134,369...80,147,128
Ensembl chr17:80,134,369...80,147,151 		JBrowse link
G HMX2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr10:123,148,136...123,150,672
Ensembl chr10:123,148,136...123,150,672 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr11:123,057,489...123,062,462
Ensembl chr11:123,057,489...123,063,230 		JBrowse link
G LMNTD2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr11:554,850...560,738
Ensembl chr11:554,850...560,738 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IMP (PMID:23793891) CAFA PMID:23793891 NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748 		JBrowse link
G NCL nucleolin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:231,453,531...231,464,484
Ensembl chr 2:231,453,531...231,483,641 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IMP (PMID:28221134) UniProt PMID:28221134 NCBI chr11:3,675,010...3,797,554
Ensembl chr11:3,671,083...3,797,792 		JBrowse link
G OBI1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr13:78,614,289...78,659,155
Ensembl chr13:78,614,289...78,659,155 		JBrowse link
G PRDX6 peroxiredoxin 6 involved_in IGI (PMID:16186110) UniProt PMID:16186110 NCBI chr 1:173,477,335...173,488,815
Ensembl chr 1:173,477,330...173,488,815 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 involved_in NAS (PMID:11756452) ComplexPortal PMID:11756452 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480465) Ensembl
MGI		 PMID:18480465 GO_REF:0000107 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585 		JBrowse link
G RBM3 RNA binding motif protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:48,574,484...48,581,162
Ensembl chr  X:48,574,449...48,581,162 		JBrowse link
G RBMX RNA binding motif protein X-linked involved_in ISS
IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:136,869,192...136,880,725
Ensembl chr  X:136,848,004...136,880,764 		JBrowse link
G RBMXL1 RBMX like 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:88,979,456...88,992,629
Ensembl chr 1:88,979,456...88,992,960 		JBrowse link
G RBMXL2 RBMX like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:7,088,998...7,091,148
Ensembl chr11:7,088,998...7,091,148 		JBrowse link
G RBMY1A1 RNA binding motif protein Y-linked family 1 member A1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:21,534,879...21,559,683
Ensembl chr  Y:21,534,879...21,549,326 		JBrowse link
G RBMY1B RNA binding motif protein Y-linked family 1 member B involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:21,511,338...21,527,216
Ensembl chr  Y:21,511,338...21,525,786 		JBrowse link
G RBMY1C RNA binding motif protein Y-linked family 1 member C involved_in IBA GO_Central GO_REF:0000033
G RBMY1D RNA binding motif protein Y-linked family 1 member D involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:21,868,431...21,900,746
Ensembl chr  Y:21,880,076...21,894,526
Ensembl chr  Y:21,880,076...21,894,526 		JBrowse link
G RBMY1E RNA binding motif protein Y-linked family 1 member E involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:21,902,177...21,918,032
Ensembl chr  Y:21,903,618...21,918,042 		JBrowse link
G RBMY1F RNA binding motif protein Y-linked family 1 member F involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:22,162,885...22,182,923
Ensembl chr  Y:22,168,542...22,182,982 		JBrowse link
G RBMY1J RNA binding motif protein Y-linked family 1 member J involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:22,403,410...22,424,870
Ensembl chr  Y:22,403,410...22,417,881
Ensembl chr  Y:22,403,410...22,417,881 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23636947) Ensembl
TreeGrafter
MGI
GO_Central		 PMID:23636947 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:149,923,317...149,927,803
Ensembl chr 1:149,923,317...149,927,803 		JBrowse link
G SLC39A5 solute carrier family 39 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr12:56,230,051...56,237,846
Ensembl chr12:56,230,049...56,237,846 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr19:49,085,451...49,108,604
Ensembl chr19:49,085,419...49,108,605 		JBrowse link
G SNW1 SNW domain containing 1 involved_in IMP (PMID:12840015) UniProt PMID:12840015 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:23,964,347...23,980,327
Ensembl chr 1:23,964,347...23,980,927 		JBrowse link
G STH saitohin involved_in IGI (PMID:16186110) UniProt PMID:16186110 NCBI chr17:45,999,250...45,999,694
Ensembl chr17:45,999,250...45,999,694 		JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IMP (PMID:20123736) UniProt PMID:20123736 NCBI chr 1:36,207,637...36,305,357
Ensembl chr 1:36,224,432...36,305,357 		JBrowse link
G TRA2A transformer 2 alpha homolog involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22194695) TreeGrafter
MGI
GO_Central		 PMID:22194695 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:23,504,780...23,531,981
Ensembl chr 7:23,504,780...23,532,041 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA
IEA		 (PMID:15009664)
(PMID:22194695)		 UniProt
MGI
GO_Central
Ensembl		 PMID:15009664 PMID:22194695 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:185,914,558...185,938,014
Ensembl chr 3:185,914,558...185,938,103 		JBrowse link
G WDR77 WD repeat domain 77 involved_in NAS (PMID:11756452) ComplexPortal PMID:11756452 NCBI chr 1:111,439,890...111,449,256
Ensembl chr 1:111,439,890...111,449,256 		JBrowse link
G ZFP64 ZFP64 zinc finger protein acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr20:52,084,011...52,191,779
Ensembl chr20:52,051,663...52,204,308 		JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARB2A ARB2 cotranscriptional regulator A involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:93,617,725...94,111,699
Ensembl chr 5:93,617,725...94,111,699 		JBrowse link
G CELF1 CUGBP Elav-like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:32109384) Ensembl
MGI
GO_Central		 PMID:32109384 GO_REF:0000033 GO_REF:0000107 NCBI chr11:47,465,937...47,565,539
Ensembl chr11:47,465,933...47,565,569 		JBrowse link
G CELF2 CUGBP Elav-like family member 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:10,462,550...11,336,675
Ensembl chr10:10,798,397...11,336,675 		JBrowse link
G CELF3 CUGBP Elav-like family member 3 involved_in IDA
IEA
IBA		 (PMID:11158314) UniProt
TreeGrafter
GO_Central		 PMID:11158314 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:151,700,058...151,716,803
Ensembl chr 1:151,700,058...151,716,803 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:19720736)
(PMID:11158314)		 MGI
GO_Central
UniProt		 PMID:11158314 PMID:19720736 GO_REF:0000033 NCBI chr18:37,242,844...37,565,798
Ensembl chr18:37,243,040...37,565,827 		JBrowse link
G CELF5 CUGBP Elav-like family member 5 involved_in IDA
IBA		 (PMID:11158314) UniProt
GO_Central		 PMID:11158314 GO_REF:0000033 NCBI chr19:3,224,661...3,297,076
Ensembl chr19:3,224,661...3,297,076 		JBrowse link
G CELF6 CUGBP Elav-like family member 6 involved_in IDA
IEA
IBA		 (PMID:14761971) UniProt
TreeGrafter
GO_Central		 PMID:14761971 GO_REF:0000033 GO_REF:0000118 NCBI chr15:72,284,727...72,320,157
Ensembl chr15:72,284,727...72,320,157 		JBrowse link
G DDX17 DEAD-box helicase 17 involved_in IMP (PMID:23022728) UniProt PMID:23022728 NCBI chr22:38,483,438...38,506,311
Ensembl chr22:38,483,438...38,507,660 		JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IMP
IDA		 (PMID:23022728)
(PMID:21343338)		 UniProt PMID:21343338 PMID:23022728 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199 		JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO PMID:22767602 UniProt PMID:22767602 RGD:8554210 NCBI chr21:37,365,573...37,526,358
Ensembl chr21:37,365,573...37,526,358 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in IDA
IEA		 (PMID:18653529) UniProt
TreeGrafter		 PMID:18653529 GO_REF:0000118 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:180,912,670...180,982,753
Ensembl chr 3:180,868,141...180,982,753 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in IMP (PMID:25689357) CAFA PMID:25689357 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088 		JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L involved_in IMP (PMID:25623890) UniProt PMID:25623890 NCBI chr19:38,836,370...38,852,347
Ensembl chr19:38,836,370...38,852,347 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IDA
IEA		 (PMID:22325991) UniProt
TreeGrafter		 PMID:22325991 GO_REF:0000118 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560 		JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in IDA
IBA
IEA		 (PMID:24514149) UniProt
GO_Central
TreeGrafter
Ensembl		 PMID:24514149 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:32,013,868...32,060,850
Ensembl chr 1:32,013,868...32,060,850 		JBrowse link
G KHDRBS2 KH RNA binding domain containing, signal transduction associated 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:61,542,670...62,286,225
Ensembl chr 6:61,679,961...62,286,225 		JBrowse link
G KHDRBS3 KH RNA binding domain containing, signal transduction associated 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:135,457,456...135,656,516
Ensembl chr 8:135,457,456...135,656,722 		JBrowse link
G MAGOH mago homolog, exon junction complex subunit involved_in IMP (PMID:22203037) UniProt PMID:22203037 NCBI chr 1:53,226,900...53,238,518
Ensembl chr 1:53,226,900...53,238,518 		JBrowse link
G MALAT1 metastasis associated lung adenocarcinoma transcript 1 acts_upstream_of_or_within ISO (PMID:20797886) MGI PMID:20797886 NCBI chr11:65,497,738...65,506,516
Ensembl chr11:65,497,640...65,508,073 		JBrowse link
G MBNL1 muscleblind like splicing regulator 1 involved_in ISO PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 3:152,243,632...152,465,780
Ensembl chr 3:152,243,828...152,465,780 		JBrowse link
G MBNL2 muscleblind like splicing regulator 2 involved_in
acts_upstream_of_or_within		 ISO PMID:31283468
(PMID:19720736)		 UniProt
MGI		 PMID:19720736 PMID:31283468 RGD:243049249 NCBI chr13:97,141,834...97,394,120
Ensembl chr13:97,221,434...97,394,120 		JBrowse link
G MYOD1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9525963) Ensembl
MGI		 PMID:9525963 GO_REF:0000107 NCBI chr11:17,719,571...17,722,136
Ensembl chr11:17,719,571...17,722,136 		JBrowse link
G NOVA1 NOVA alternative splicing regulator 1 involved_in IEA
IBA
ISS		 Ensembl
TreeGrafter
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:26,443,090...26,598,033
Ensembl chr14:26,443,090...26,598,033 		JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in IMP
IBA
IEA
ISS		 (PMID:32197073) UniProt
GO_Central
Ensembl		 PMID:32197073 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:45,933,734...45,973,865
Ensembl chr19:45,933,734...45,974,044 		JBrowse link
G NSRP1 nuclear speckle splicing regulatory protein 1 involved_in IDA
IEA		 (PMID:21296756) UniProt
InterPro		 PMID:21296756 GO_REF:0000002 NCBI chr17:30,116,816...30,186,475
Ensembl chr17:30,115,521...30,186,475 		JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 involved_in IDA (PMID:16260624), (PMID:21518792) UniProt PMID:16260624 PMID:21518792 NCBI chr19:797,452...812,312
Ensembl chr19:797,075...812,327 		JBrowse link
G PUF60 poly(U) binding splicing factor 60 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:143,816,344...143,829,315
Ensembl chr 8:143,816,344...143,830,709 		JBrowse link
G RBFOX1 RNA binding fox-1 homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23300487) InterPro
MGI
TreeGrafter
GO_Central		 PMID:23300487 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr16:5,239,721...7,713,340
Ensembl chr16:5,239,802...7,713,340 		JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA		 (PMID:22357600)
Cacna1c
Fxr1, Mef2a, Mtmr3
Atp2b1, Mef2a
Mcl1		 BHF-UCL
TreeGrafter
MGI
GO_Central
UniProt
RGD
Ensembl
InterPro		 PMID:22357600 PMID:27239029 PMID:28993448 PMID:31778749 PMID:35641779 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:329845872 RGD:329845873 RGD:329845874 RGD:329848961 NCBI chr22:35,738,736...36,028,824
Ensembl chr22:35,738,736...36,028,824 		JBrowse link
G RBFOX3 RNA binding fox-1 homolog 3 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr17:79,089,345...79,665,571
Ensembl chr17:79,089,345...79,611,051 		JBrowse link
G RBM11 RNA binding motif protein 11 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:21984414) MGI
GO_Central		 PMID:21984414 GO_REF:0000033 NCBI chr21:14,216,157...14,228,372
Ensembl chr21:14,216,130...14,228,372 		JBrowse link
G RBM15 RNA binding motif protein 15 involved_in IDA
IBA
IEA		 (PMID:26575292) UniProt
GO_Central
Ensembl		 PMID:26575292 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681 		JBrowse link
G RBM15B RNA binding motif protein 15B involved_in IDA
IBA
IEA		 (PMID:16129689) UniProt
GO_Central
TreeGrafter		 PMID:16129689 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:51,391,285...51,397,908
Ensembl chr 3:51,391,285...51,397,908 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:110,643,245...110,839,468
Ensembl chr10:110,644,336...110,839,468 		JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISS
IBA
IEA
IMP		 (PMID:26844700), (PMID:26990106), (PMID:29104163) UniProt
GO_Central
TreeGrafter
Ensembl		 PMID:26844700 PMID:26990106 PMID:29104163 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871 		JBrowse link
G RBM25 RNA binding motif protein 25 involved_in IDA
IBA		 (PMID:18663000) UniProt
GO_Central		 PMID:18663000 GO_REF:0000033 NCBI chr14:73,058,534...73,123,899
Ensembl chr14:73,058,532...73,123,899 		JBrowse link
G RBM4 RNA binding motif protein 4 involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 (PMID:12628928), (PMID:16260624), (PMID:16777844), (PMID:16934801), (PMID:21518792)
(PMID:23129807)		 UniProt
MGI
Ensembl		 PMID:12628928 PMID:16260624 PMID:16777844 PMID:16934801 PMID:21518792 More... GO_REF:0000107 NCBI chr11:66,638,703...66,668,380
Ensembl chr11:66,638,667...66,668,374 		JBrowse link
G RBM47 RNA binding motif protein 47 involved_in IDA (PMID:31358901) UniProt PMID:31358901 NCBI chr 4:40,423,280...40,630,852
Ensembl chr 4:40,423,267...40,630,875 		JBrowse link
G RBM5 RNA binding motif protein 5 involved_in IDA (PMID:18840686), (PMID:18951082) UniProt PMID:18840686 PMID:18951082 NCBI chr 3:50,088,919...50,119,021
Ensembl chr 3:50,088,919...50,119,021 		JBrowse link
G RBM7 RNA binding motif protein 7 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:114,400,666...114,410,607
Ensembl chr11:114,400,030...114,414,203 		JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IMP (PMID:22203037) UniProt PMID:22203037 NCBI chr 1:145,921,556...145,927,484
Ensembl chr 1:145,921,556...145,927,678 		JBrowse link
G RBMX RNA binding motif protein X-linked involved_in IDA (PMID:12165565), (PMID:12761049) UniProt PMID:12165565 PMID:12761049 NCBI chr  X:136,869,192...136,880,725
Ensembl chr  X:136,848,004...136,880,764 		JBrowse link
G RBMXL1 RBMX like 1 involved_in ISO PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr 1:88,979,456...88,992,629
Ensembl chr 1:88,979,456...88,992,960 		JBrowse link
G RBMY1A1 RNA binding motif protein Y-linked family 1 member A1 involved_in IDA (PMID:12165565) UniProt PMID:12165565 NCBI chr  Y:21,534,879...21,559,683
Ensembl chr  Y:21,534,879...21,549,326 		JBrowse link
G RBMY1D RNA binding motif protein Y-linked family 1 member D involved_in IDA (PMID:12165565) UniProt PMID:12165565 NCBI chr  Y:21,868,431...21,900,746
Ensembl chr  Y:21,880,076...21,894,526
Ensembl chr  Y:21,880,076...21,894,526 		JBrowse link
G RBPMS RNA binding protein, mRNA processing factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:30,384,541...30,572,256
Ensembl chr 8:30,384,511...30,572,256 		JBrowse link
G RBPMS2 RNA binding protein, mRNA processing factor 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:64,739,891...64,775,589
Ensembl chr15:64,739,891...64,775,589 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808 		JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IMP (PMID:22203037) UniProt PMID:22203037 NCBI chr16:2,253,116...2,268,126
Ensembl chr16:2,253,116...2,268,397 		JBrowse link
G SAP18 Sin3A associated protein 18 involved_in IDA
IMP		 (PMID:20966198)
(PMID:22203037)		 UniProt PMID:20966198 PMID:22203037 NCBI chr13:21,140,119...21,149,097
Ensembl chr13:21,140,119...21,149,097 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:30,331,988...30,356,894
Ensembl chr22:30,331,988...30,356,919 		JBrowse link
G SMU1 SMU1 DNA replication regulator and spliceosomal factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:33,041,765...33,076,674
Ensembl chr 9:33,041,765...33,076,674 		JBrowse link
G SRRM4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within		 ISS
ISO
IDA
IEA		 (PMID:23055939)
(PMID:29961578)		 UniProt
MGI
Ensembl		 PMID:23055939 PMID:29961578 GO_REF:0000024 GO_REF:0000107 NCBI chr12:118,981,541...119,163,051
Ensembl chr12:118,981,541...119,163,051 		JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 involved_in IDA (PMID:11684676) UniProt PMID:11684676 NCBI chr 6:89,095,959...89,118,071
Ensembl chr 6:89,095,959...89,118,071 		JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21470964) Ensembl
MGI		 PMID:21470964 GO_REF:0000107 NCBI chr17:76,734,115...76,737,411
Ensembl chr17:76,734,115...76,737,333 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 acts_upstream_of_or_within
involved_in		 IDA
IMP		 (PMID:23132731)
(PMID:24440982)		 MGI
UniProt		 PMID:23132731 PMID:24440982 NCBI chr20:43,457,896...43,464,243
Ensembl chr20:43,457,893...43,466,046 		JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IMP (PMID:20932480) UniProt PMID:20932480 NCBI chr 1:36,207,637...36,305,357
Ensembl chr 1:36,224,432...36,305,357 		JBrowse link
G TIA1 TIA1 cytotoxic granule associated RNA binding protein involved_in IEA
IDA		 (PMID:14966131), (PMID:17580305) Ensembl
UniProt		 PMID:14966131 PMID:17580305 GO_REF:0000107 NCBI chr 2:70,209,444...70,248,793
Ensembl chr 2:70,209,444...70,248,660 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in IDA
IMP		 (PMID:12165565), (PMID:12761049)
(PMID:25689357)		 UniProt
CAFA		 PMID:12165565 PMID:12761049 PMID:25689357 NCBI chr 3:185,914,558...185,938,014
Ensembl chr 3:185,914,558...185,938,103 		JBrowse link
G WTAP WT1 associated protein involved_in IEA
IBA
IMP		 (PMID:24407421) InterPro
TreeGrafter
GO_Central
UniProt		 PMID:24407421 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:159,726,693...159,756,319
Ensembl chr 6:159,725,585...159,756,319 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:29799838) Ensembl
MGI
GO_Central		 PMID:29799838 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:68,310,387...68,350,090
Ensembl chr 4:68,310,387...68,350,090 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IDA (PMID:24514149) UniProt PMID:24514149 NCBI chr19:4,043,303...4,066,899
Ensembl chr19:4,043,303...4,066,899 		JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CWC22 CWC22 spliceosome associated protein homolog involved_in IC (PMID:11991638) UniProt PMID:11991638 NCBI chr 2:179,944,876...180,007,297
Ensembl chr 2:179,944,876...180,007,297 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631 		JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in IMP
IEA		 (PMID:19574390) UniProt
Ensembl		 PMID:19574390 GO_REF:0000107 NCBI chr17:76,712,836...76,726,606
Ensembl chr17:76,712,832...76,726,799 		JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:32,013,868...32,060,850
Ensembl chr 1:32,013,868...32,060,850 		JBrowse link
G KHDRBS2 KH RNA binding domain containing, signal transduction associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:61,542,670...62,286,225
Ensembl chr 6:61,679,961...62,286,225 		JBrowse link
G KHDRBS3 KH RNA binding domain containing, signal transduction associated 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,457,456...135,656,516
Ensembl chr 8:135,457,456...135,656,722 		JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator involved_in IMP (PMID:32017898) UniProt PMID:32017898 NCBI chr 4:112,637,143...112,657,586
Ensembl chr 4:112,637,077...112,657,696 		JBrowse link
G METTL16 methyltransferase 16, RNA N6-adenosine NOT|involved_in ISO
IDA		 (MGI:6114846|PMID:29262316)
(PMID:28525753)		 UniProt
UniProt		 PMID:28525753 PMID:29262316 MGI:6114846 NCBI chr17:2,415,715...2,511,888
Ensembl chr17:2,405,562...2,511,891 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in IDA
IBA
ISS
IEA		 (PMID:27029405), (PMID:31331967), (PMID:34428287) UniProt
GO_Central
Ensembl		 PMID:27029405 PMID:31331967 PMID:34428287 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:163,414,718...163,578,592
Ensembl chr 6:163,414,000...163,578,592 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in IMP
IDA		 (PMID:26604136), (PMID:27496873), (PMID:32840935)
(PMID:30948719)		 UniProt PMID:26604136 PMID:27496873 PMID:30948719 PMID:32840935 NCBI chr10:110,643,245...110,839,468
Ensembl chr10:110,644,336...110,839,468 		JBrowse link
G RBM23 RNA binding motif protein 23 involved_in IDA
IBA
IEA		 (PMID:15694343) UniProt
GO_Central
TreeGrafter		 PMID:15694343 GO_REF:0000033 GO_REF:0000118 NCBI chr14:22,893,204...22,919,149
Ensembl chr14:22,893,204...22,919,182 		JBrowse link
G RBM39 RNA binding motif protein 39 involved_in IMP
IDA		 (PMID:28302793), (PMID:28437394)
(PMID:15694343)		 UniProt PMID:15694343 PMID:28302793 PMID:28437394 NCBI chr20:35,701,347...35,742,260
Ensembl chr20:35,701,347...35,742,312 		JBrowse link
G SF1 splicing factor 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:64,764,606...64,778,542
Ensembl chr11:64,764,606...64,778,786 		JBrowse link
G SON SON DNA and RNA binding protein involved_in IDA
IEA
IBA		 (PMID:21504830) UniProt
TreeGrafter
GO_Central		 PMID:21504830 GO_REF:0000033 GO_REF:0000118 NCBI chr21:33,543,038...33,577,481
Ensembl chr21:33,543,038...33,577,481 		JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in TAS (PMID:21205200) UniProt PMID:21205200 NCBI chr 6:35,832,966...35,921,098
Ensembl chr 6:35,832,966...35,921,342 		JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in TAS (PMID:21205200) UniProt PMID:21205200 NCBI chr 7:105,114,740...105,399,357
Ensembl chr 7:105,110,704...105,399,308 		JBrowse link
G SRRM1 serine and arginine repetitive matrix 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:24,643,302...24,673,281
Ensembl chr 1:24,631,716...24,673,281 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IDA (PMID:26876937) UniProt PMID:26876937 NCBI chr 1:23,964,347...23,980,327
Ensembl chr 1:23,964,347...23,980,927 		JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 involved_in IDA (PMID:26876937), (PMID:32440474) UniProt PMID:26876937 PMID:32440474 NCBI chr 6:36,594,362...36,605,600
Ensembl chr 6:36,594,353...36,605,600 		JBrowse link
G TIA1 TIA1 cytotoxic granule associated RNA binding protein involved_in IDA (PMID:11106748), (PMID:7488725) UniProt PMID:7488725 PMID:11106748 NCBI chr 2:70,209,444...70,248,793
Ensembl chr 2:70,209,444...70,248,660 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IDA (PMID:26876937), (PMID:28984244) UniProt PMID:26876937 PMID:28984244 NCBI chr 4:68,310,387...68,350,090
Ensembl chr 4:68,310,387...68,350,090 		JBrowse link
spliceosomal complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRNKL1 crooked neck pre-mRNA splicing factor 1 involved_in IDA
IEA
IBA		 (PMID:12084575) UniProt
TreeGrafter
GO_Central		 PMID:12084575 GO_REF:0000033 GO_REF:0000118 NCBI chr20:20,034,368...20,056,046
Ensembl chr20:20,034,368...20,056,046 		JBrowse link
G DDX1 DEAD-box helicase 1 involved_in NAS (PMID:7689221) UniProt PMID:7689221 NCBI chr 2:15,591,868...15,631,101
Ensembl chr 2:15,591,178...15,634,346 		JBrowse link
G DDX39B DExD-box helicase 39B involved_in IDA (PMID:18593880) BHF-UCL PMID:18593880 NCBI chr 6:31,530,226...31,542,003
Ensembl chr 6:31,530,219...31,542,448 		JBrowse link
G GCFC2 GC-rich sequence DNA-binding factor 2 involved_in IMP (PMID:24304693) UniProt PMID:24304693 NCBI chr 2:75,662,705...75,713,122
Ensembl chr 2:75,652,000...75,710,985 		JBrowse link
G GEMIN2 gem nuclear organelle associated protein 2 involved_in TAS
IEA		 (PMID:9323129) PINC
UniProt
InterPro		 PMID:9323129 GO_REF:0000002 GO_REF:0000104 NCBI chr14:39,114,323...39,136,973
Ensembl chr14:39,114,285...39,136,973 		JBrowse link
G GEMIN6 gem nuclear organelle associated protein 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:38,778,210...38,785,002
Ensembl chr 2:38,751,534...38,785,002 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IMP (PMID:23793891) CAFA PMID:23793891 NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IMP (PMID:16332694) BHF-UCL PMID:16332694 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585 		JBrowse link
G PRPF6 pre-mRNA processing factor 6 involved_in NAS (PMID:10788320) UniProt PMID:10788320 NCBI chr20:63,981,132...64,033,100
Ensembl chr20:63,981,132...64,033,100 		JBrowse link
G RBM5 RNA binding motif protein 5 involved_in IDA (PMID:18951082) UniProt PMID:18951082 NCBI chr 3:50,088,919...50,119,021
Ensembl chr 3:50,088,919...50,119,021 		JBrowse link
G RSRP1 arginine and serine rich protein 1 involved_in IDA (PMID:34042961) UniProt PMID:34042961 NCBI chr 1:25,242,249...25,338,254
Ensembl chr 1:25,242,249...25,338,213 		JBrowse link
G SCAF11 SR-related CTD associated factor 11 involved_in IDA
IBA
IEA		 (PMID:9447963) UniProt
GO_Central
TreeGrafter		 PMID:9447963 GO_REF:0000033 GO_REF:0000118 NCBI chr12:45,919,131...45,992,059
Ensembl chr12:45,919,131...45,992,120 		JBrowse link
G SF1 splicing factor 1 involved_in NAS (PMID:8752089) UniProt PMID:8752089 NCBI chr11:64,764,606...64,778,542
Ensembl chr11:64,764,606...64,778,786 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:2,236,824...2,248,655
Ensembl chr19:2,236,824...2,248,655 		JBrowse link
G SF3B1 splicing factor 3b subunit 1 involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:197,389,784...197,435,093
Ensembl chr 2:197,388,515...197,435,079 		JBrowse link
G SMN1 survival of motor neuron 1, telomeric involved_in IMP
NAS		 (PMID:9845364)
(PMID:9323129)		 UniProt PMID:9323129 PMID:9845364 NCBI chr 5:70,924,941...70,966,375
Ensembl chr 5:70,925,030...70,953,942
Ensembl chr 5:70,925,030...70,953,942 		JBrowse link
G SMN2 survival of motor neuron 2, centromeric involved_in IMP
NAS		 (PMID:9845364)
(PMID:9323129)		 UniProt PMID:9323129 PMID:9845364 NCBI chr 5:70,049,523...70,090,528
Ensembl chr 5:70,049,638...70,078,522
Ensembl chr 5:70,049,638...70,078,522 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide involved_in TAS (PMID:7527560) PINC PMID:7527560 NCBI chr18:21,612,314...21,633,520
Ensembl chr18:21,612,314...21,633,524 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide involved_in TAS (PMID:7527560) PINC PMID:7527560 NCBI chr19:45,687,454...45,692,316
Ensembl chr19:45,687,460...45,692,569 		JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E involved_in NAS (PMID:2974536) UniProt PMID:2974536 NCBI chr 1:203,861,599...203,871,152
Ensembl chr 1:203,861,599...203,871,152 		JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G involved_in NAS (PMID:7744013) UniProt PMID:7744013 NCBI chr 2:70,281,362...70,293,740
Ensembl chr 2:70,281,362...70,293,740 		JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:35,832,966...35,921,098
Ensembl chr 6:35,832,966...35,921,342 		JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IDA
IBA		 (PMID:9472028) UniProt
GO_Central		 PMID:9472028 GO_REF:0000033 NCBI chr 7:105,114,740...105,399,357
Ensembl chr 7:105,110,704...105,399,308 		JBrowse link
G SRPK3 SRSF protein kinase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:153,781,041...153,785,730
Ensembl chr  X:153,776,412...153,785,732 		JBrowse link
G TXNL4A thioredoxin like 4A involved_in TAS (PMID:10610776) UniProt PMID:10610776 NCBI chr18:79,970,813...80,033,936
Ensembl chr18:79,970,813...80,033,949 		JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:55,655,035...55,674,716
Ensembl chr19:55,654,146...55,674,716 		JBrowse link
G USP39 ubiquitin specific peptidase 39 involved_in IMP
TAS
IEA		 (PMID:11350945)
(PMID:10022888)		 UniProt
PINC
InterPro		 PMID:10022888 PMID:11350945 GO_REF:0000002 NCBI chr 2:85,602,861...85,649,283
Ensembl chr 2:85,602,856...85,649,283 		JBrowse link
G ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 involved_in IMP (PMID:21041408) UniProt PMID:21041408 NCBI chr  X:15,790,484...15,823,260
Ensembl chr  X:15,790,156...15,830,694 		JBrowse link
spliceosomal complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX8 DEAH-box helicase 8 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:43,483,975...43,544,799
Ensembl chr17:43,483,865...43,610,338 		JBrowse link
G DNAJC17 DnaJ heat shock protein family (Hsp40) member C17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:40,765,161...40,807,473
Ensembl chr15:40,765,161...40,807,478 		JBrowse link
G TFIP11 tuftelin interacting protein 11 involved_in IMP
IEA
IBA		 (PMID:19103666) UniProt
TreeGrafter
GO_Central
InterPro
Ensembl		 PMID:19103666 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr22:26,491,240...26,512,473
Ensembl chr22:26,491,225...26,512,505 		JBrowse link
spliceosomal snRNP assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLNS1A chloride nucleotide-sensitive channel 1A involved_in IEA
IBA
NAS
IDA		 (PMID:11756452)
(PMID:18984161)		 InterPro
GO_Central
ComplexPortal
UniProt		 PMID:11756452 PMID:18984161 GO_REF:0000002 GO_REF:0000033 NCBI chr11:77,614,530...77,637,794
Ensembl chr11:77,514,936...77,637,794 		JBrowse link
G COIL coilin involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:56,938,199...56,961,050
Ensembl chr17:56,938,199...56,961,050 		JBrowse link
G DDX20 DEAD-box helicase 20 involved_in IDA
IBA
IEA
EXP		 (PMID:18984161)
(PMID:12067652)		 UniProt
GO_Central
TreeGrafter
ComplexPortal		 PMID:12067652 PMID:18984161 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:111,755,901...111,768,000
Ensembl chr 1:111,754,832...111,775,602 		JBrowse link
G GEMIN2 gem nuclear organelle associated protein 2 involved_in IDA
IBA
EXP
IEA		 (PMID:18984161), (PMID:31799625)
(PMID:12067652)		 UniProt
GO_Central
ComplexPortal
InterPro		 PMID:12067652 PMID:18984161 PMID:31799625 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr14:39,114,323...39,136,973
Ensembl chr14:39,114,285...39,136,973 		JBrowse link
G GEMIN4 gem nuclear organelle associated protein 4 involved_in IEA
IBA
EXP
IDA		 (PMID:12067652)
(PMID:18984161)		 InterPro
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:12067652 PMID:18984161 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr17:744,421...754,410
Ensembl chr17:744,421...753,999 		JBrowse link
G GEMIN5 gem nuclear organelle associated protein 5 involved_in TAS
IEA
IBA
EXP
IDA		 (PMID:11714716)
(PMID:12067652)
(PMID:18984161)		 UniProt
TreeGrafter
GO_Central
ComplexPortal		 PMID:11714716 PMID:12067652 PMID:18984161 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:154,887,411...154,938,211
Ensembl chr 5:154,887,411...154,938,211 		JBrowse link
G GEMIN6 gem nuclear organelle associated protein 6 involved_in IDA
IBA
EXP
TAS		 (PMID:18984161)
(PMID:12067652)
(PMID:11748230)		 UniProt
GO_Central
ComplexPortal		 PMID:11748230 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 2:38,778,210...38,785,002
Ensembl chr 2:38,751,534...38,785,002 		JBrowse link
G GEMIN7 gem nuclear organelle associated protein 7 involved_in IDA
IBA
EXP
TAS		 (PMID:18984161)
(PMID:12067652)
(PMID:12065586)		 UniProt
GO_Central
ComplexPortal		 PMID:12065586 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr19:45,075,627...45,091,518
Ensembl chr19:45,079,195...45,091,518 		JBrowse link
G GEMIN8 gem nuclear organelle associated protein 8 involved_in IDA
IBA
EXP
IEA		 (PMID:16434402), (PMID:18984161)
(PMID:12067652)		 UniProt
GO_Central
ComplexPortal
InterPro		 PMID:12067652 PMID:16434402 PMID:18984161 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:13,984,185...14,029,892
Ensembl chr  X:14,006,726...14,029,893 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr22:24,583,750...24,628,996
Ensembl chr22:24,594,811...24,629,005 		JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:18,306,236...18,323,076
Ensembl chr19:18,306,236...18,323,112 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 involved_in IMP
NAS		 (PMID:17709427)
(PMID:11756452)		 UniProt
ComplexPortal		 PMID:11756452 PMID:17709427 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408 		JBrowse link
G PRMT7 protein arginine methyltransferase 7 involved_in IEA
IMP		 (PMID:17709427) UniProt PMID:17709427 GO_REF:0000104 NCBI chr16:68,311,019...68,360,870
Ensembl chr16:68,310,951...68,360,852 		JBrowse link
G PRP4K pre-mRNA processing factor kinase PRP4K involved_in IDA (PMID:12077342) UniProt PMID:12077342 NCBI chr 6:4,021,300...4,064,983
Ensembl chr 6:4,021,267...4,064,983 		JBrowse link
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in TAS (PMID:16687569) BHF-UCL PMID:16687569 NCBI chr11:65,961,734...65,980,137
Ensembl chr11:65,961,728...65,980,137 		JBrowse link
G SART3 spliceosome associated factor 3, U4/U6 recycling protein NOT|involved_in IDA (PMID:15314151)
(PMID:14749385), (PMID:15314151)		 UniProt PMID:14749385 PMID:15314151 NCBI chr12:108,522,214...108,561,173
Ensembl chr12:108,522,214...108,561,400 		JBrowse link
G SMN1 survival of motor neuron 1, telomeric involved_in IDA
IBA
EXP		 (PMID:18984161)
(PMID:12067652)		 UniProt
GO_Central
ComplexPortal		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 5:70,924,941...70,966,375
Ensembl chr 5:70,925,030...70,953,942
Ensembl chr 5:70,925,030...70,953,942 		JBrowse link
G SMN2 survival of motor neuron 2, centromeric involved_in IDA
IBA
EXP		 (PMID:18984161)
(PMID:12067652)		 UniProt
GO_Central
ComplexPortal		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr 5:70,049,523...70,090,528
Ensembl chr 5:70,049,638...70,078,522
Ensembl chr 5:70,049,638...70,078,522 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 involved_in IDA (PMID:18984161) UniProt PMID:18984161 NCBI chr20:2,461,642...2,470,789
Ensembl chr20:2,461,634...2,470,853 		JBrowse link
G SNRPC small nuclear ribonucleoprotein polypeptide C involved_in IDA
IEA		 (PMID:8972845) UniProt
InterPro		 PMID:8972845 GO_REF:0000002 GO_REF:0000104 NCBI chr 6:34,757,505...34,773,857
Ensembl chr 6:34,757,505...34,773,857 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide involved_in IDA
IBA
IEA		 (PMID:18984161) UniProt
GO_Central
InterPro		 PMID:18984161 GO_REF:0000002 GO_REF:0000033 NCBI chr18:21,612,314...21,633,520
Ensembl chr18:21,612,314...21,633,524 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide involved_in IDA
IBA		 (PMID:18984161) UniProt
GO_Central		 PMID:18984161 GO_REF:0000033 NCBI chr19:45,687,454...45,692,316
Ensembl chr19:45,687,460...45,692,569 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide involved_in IEA
IBA
IDA		 (PMID:18984161) InterPro
GO_Central
UniProt		 PMID:18984161 GO_REF:0000002 GO_REF:0000033 NCBI chr22:24,555,650...24,574,971
Ensembl chr22:24,555,958...24,582,052 		JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E involved_in IEA
IBA
IDA		 (PMID:18984161) UniProt
GO_Central		 PMID:18984161 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:203,861,599...203,871,152
Ensembl chr 1:203,861,599...203,871,152 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F involved_in IEA
IDA		 (PMID:18984161) InterPro
UniProt		 PMID:18984161 GO_REF:0000002 NCBI chr12:95,858,952...95,866,140
Ensembl chr12:95,858,952...95,903,828 		JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G involved_in IEA
IDA		 (PMID:18984161) InterPro
UniProt		 PMID:18984161 GO_REF:0000002 GO_REF:0000104 NCBI chr 2:70,281,362...70,293,740
Ensembl chr 2:70,281,362...70,293,740 		JBrowse link
G SNRPGP15 small nuclear ribonucleoprotein polypeptide G pseudogene 15 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:14,489,297...14,489,890
Ensembl chr19:14,489,388...14,489,609 		JBrowse link
G STRAP serine/threonine kinase receptor associated protein involved_in IDA
IBA
EXP		 (PMID:18984161)
(PMID:12067652)		 UniProt
GO_Central
ComplexPortal		 PMID:12067652 PMID:18984161 GO_REF:0000033 NCBI chr12:15,882,387...15,903,478
Ensembl chr12:15,882,387...15,903,478 		JBrowse link
G TDRD6 tudor domain containing 6 involved_in ISO (MGI:5904379|PMID:28263986) CACAO PMID:28263986 MGI:5904379 NCBI chr 6:46,680,268...46,704,319
Ensembl chr 6:46,687,875...46,704,319 		JBrowse link
G TGS1 trimethylguanosine synthase 1 involved_in TAS Reactome Reactome:R-HSA-191784 NCBI chr 8:55,773,446...55,826,445
Ensembl chr 8:55,773,446...55,826,445 		JBrowse link
G TSSC4 tumor suppressing subtransferable candidate 4 involved_in IDA (PMID:35188580) UniProt PMID:35188580 NCBI chr11:2,400,750...2,403,876
Ensembl chr11:2,400,488...2,403,878 		JBrowse link
G WDR77 WD repeat domain 77 involved_in NAS (PMID:11756452) ComplexPortal PMID:11756452 NCBI chr 1:111,439,890...111,449,256
Ensembl chr 1:111,439,890...111,449,256 		JBrowse link
spliceosomal tri-snRNP complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAR2 AAR2 splicing factor involved_in ISS
IBA		 FlyBase
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr20:36,236,478...36,256,933
Ensembl chr20:36,236,131...36,270,918 		JBrowse link
G CD2BP2 CD2 cytoplasmic tail binding protein 2 involved_in NAS (PMID:15840814) BHF-UCL PMID:15840814 NCBI chr16:30,350,773...30,355,308
Ensembl chr16:30,350,773...30,355,308 		JBrowse link
G DDX20 DEAD-box helicase 20 involved_in TAS (PMID:10601333) PINC PMID:10601333 NCBI chr 1:111,755,901...111,768,000
Ensembl chr 1:111,754,832...111,775,602 		JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within IDA (PMID:10523320) MGI PMID:10523320 NCBI chr 6:31,797,396...31,806,966
Ensembl chr 6:31,797,396...31,806,966 		JBrowse link
G PRP4K pre-mRNA processing factor kinase PRP4K involved_in IDA (PMID:20118938) UniProt PMID:20118938 NCBI chr 6:4,021,300...4,064,983
Ensembl chr 6:4,021,267...4,064,983 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IDA (PMID:20595234) UniProt PMID:20595234 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585 		JBrowse link
G PRPF3 pre-mRNA processing factor 3 involved_in IDA (PMID:20595234) UniProt PMID:20595234 NCBI chr 1:150,321,468...150,353,233
Ensembl chr 1:150,321,479...150,353,233 		JBrowse link
G PRPF31 pre-mRNA processing factor 31 acts_upstream_of_or_within
involved_in		 IDA
IMP
IEA		 (PMID:11867543)
(PMID:20118938)
(PMID:15257298)		 MGI
UniProt
BHF-UCL
InterPro		 PMID:11867543 PMID:15257298 PMID:20118938 GO_REF:0000002 NCBI chr19:54,115,754...54,131,713
Ensembl chr19:54,115,410...54,131,719 		JBrowse link
G PRPF6 pre-mRNA processing factor 6 involved_in IC
IBA
IDA
IMP		 (PMID:10788320)
(PMID:20118938)
(PMID:15257298)		 BHF-UCL
GO_Central
UniProt		 PMID:10788320 PMID:15257298 PMID:20118938 GO_REF:0000033 NCBI chr20:63,981,132...64,033,100
Ensembl chr20:63,981,132...64,033,100 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 involved_in IDA
IBA		 (PMID:20595234) UniProt
GO_Central		 PMID:20595234 GO_REF:0000033 NCBI chr17:1,650,629...1,684,867
Ensembl chr17:1,650,629...1,684,867 		JBrowse link
G RNU4-1 RNA, U4 small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr12:120,293,094...120,293,237
Ensembl chr12:120,293,097...120,293,237 		JBrowse link
G RNU4-2 RNA, U4 small nuclear 2 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr12:120,291,763...120,291,903
Ensembl chr12:120,291,763...120,291,903 		JBrowse link
G RNU4ATAC RNA, U4atac small nuclear involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 2:121,530,880...121,531,009
Ensembl chr 2:121,530,881...121,531,007 		JBrowse link
G RNU5A-1 RNA, U5A small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr15:65,296,051...65,296,167
Ensembl chr15:65,296,051...65,296,166 		JBrowse link
G RNU5B-1 RNA, U5B small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr15:65,304,677...65,304,793
Ensembl chr15:65,304,677...65,304,792 		JBrowse link
G RNU5D-1 RNA, U5D small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:44,731,069...44,731,168
Ensembl chr 1:44,731,055...44,731,170 		JBrowse link
G RNU5E-1 RNA, U5E small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:11,908,154...11,908,272
Ensembl chr 1:11,908,152...11,908,271 		JBrowse link
G RNU5F-1 RNA, U5F small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 1:44,721,786...44,721,901
Ensembl chr 1:44,721,786...44,721,902 		JBrowse link
G RNU6-1 RNA, U6 small nuclear 1 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr15:67,839,940...67,840,045
Ensembl chr15:67,839,939...67,840,045 		JBrowse link
G RNU6-2 RNA, U6 small nuclear 2 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr19:1,021,522...1,021,628
Ensembl chr19:1,021,522...1,021,628 		JBrowse link
G RNU6-7 RNA, U6 small nuclear 7 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr14:32,202,045...32,202,151
Ensembl chr14:32,202,045...32,202,151 		JBrowse link
G RNU6-8 RNA, U6 small nuclear 8 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr14:32,203,163...32,203,269
Ensembl chr14:32,203,163...32,203,269 		JBrowse link
G RNU6-9 RNA, U6 small nuclear 9 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr19:893,484...893,590
Ensembl chr19:893,484...893,590 		JBrowse link
G RNU6ATAC RNA, U6atac small nuclear involved_in IEA RNAcentral GO_REF:0000115 NCBI chr 9:134,164,440...134,164,564
Ensembl chr 9:134,164,439...134,164,564 		JBrowse link
G SART3 spliceosome associated factor 3, U4/U6 recycling protein involved_in IDA (PMID:12032085), (PMID:20595234) UniProt PMID:12032085 PMID:20595234 NCBI chr12:108,522,214...108,561,173
Ensembl chr12:108,522,214...108,561,400 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in NAS (PMID:11684676) UniProt PMID:11684676 NCBI chr 1:23,964,347...23,980,327
Ensembl chr 1:23,964,347...23,980,927 		JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 involved_in NAS (PMID:11684676) UniProt PMID:11684676 NCBI chr 6:89,095,959...89,118,071
Ensembl chr 6:89,095,959...89,118,071 		JBrowse link
G TSSC4 tumor suppressing subtransferable candidate 4 involved_in IMP (PMID:34131137) UniProt PMID:34131137 NCBI chr11:2,400,750...2,403,876
Ensembl chr11:2,400,488...2,403,878 		JBrowse link
G USP4 ubiquitin specific peptidase 4 involved_in IMP (PMID:20595234) UniProt PMID:20595234 NCBI chr 3:49,277,144...49,340,053
Ensembl chr 3:49,277,144...49,340,712 		JBrowse link
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 involved_in IDA
IEA
IBA		 (PMID:35241646) UniProt
TreeGrafter
GO_Central		 PMID:35241646 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:96,274,338...96,305,546
Ensembl chr 2:96,274,338...96,321,271 		JBrowse link
U2-type prespliceosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BUD13 BUD13 homolog involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr11:116,748,173...116,772,987
Ensembl chr11:116,748,170...116,772,987 		JBrowse link
G DDX42 DEAD-box helicase 42 involved_in IDA (PMID:36797247) UniProt PMID:36797247 NCBI chr17:63,773,800...63,819,317
Ensembl chr17:63,773,603...63,819,317 		JBrowse link
G DDX46 DEAD-box helicase 46 involved_in NAS
IDA		 (PMID:31744343)
(PMID:36797247)		 ComplexPortal
UniProt		 PMID:31744343 PMID:36797247 NCBI chr 5:134,758,779...134,831,121
Ensembl chr 5:134,758,771...134,855,133 		JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 involved_in NAS
IDA		 (PMID:31744343)
(PMID:32494006), (PMID:34822310)		 ComplexPortal
UniProt		 PMID:31744343 PMID:32494006 PMID:34822310 NCBI chr  X:136,497,229...136,512,346
Ensembl chr  X:136,497,079...136,512,346 		JBrowse link
G PHF5A PHD finger protein 5A involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr22:41,459,717...41,468,692
Ensembl chr22:41,459,717...41,468,692 		JBrowse link
G RBMX2 RNA binding motif protein X-linked 2 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr  X:130,401,987...130,413,656
Ensembl chr  X:130,401,987...130,413,656 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 involved_in IDA
NAS		 (PMID:10882114), (PMID:11533230)
(PMID:31744343)		 UniProt
ComplexPortal		 PMID:10882114 PMID:11533230 PMID:31744343 NCBI chr22:30,331,988...30,356,894
Ensembl chr22:30,331,988...30,356,919 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 involved_in IDA
NAS		 (PMID:11533230)
(PMID:31744343)		 UniProt
ComplexPortal		 PMID:11533230 PMID:31744343 NCBI chr19:2,236,824...2,248,655
Ensembl chr19:2,236,824...2,248,655 		JBrowse link
G SF3A3 splicing factor 3a subunit 3 involved_in IDA
NAS		 (PMID:11533230)
(PMID:31744343)		 UniProt
ComplexPortal		 PMID:11533230 PMID:31744343 NCBI chr 1:37,956,975...37,990,022
Ensembl chr 1:37,956,975...37,990,075 		JBrowse link
G SF3B1 splicing factor 3b subunit 1 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr 2:197,389,784...197,435,093
Ensembl chr 2:197,388,515...197,435,079 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr11:66,052,364...66,069,308
Ensembl chr11:66,050,729...66,069,308 		JBrowse link
G SF3B3 splicing factor 3b subunit 3 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr16:70,523,816...70,577,668
Ensembl chr16:70,523,791...70,577,670 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr 1:149,923,317...149,927,803
Ensembl chr 1:149,923,317...149,927,803 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr 6:144,094,884...144,095,573
Ensembl chr 6:144,094,884...144,095,573 		JBrowse link
G SF3B6 splicing factor 3b subunit 6 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr 2:24,067,586...24,076,326
Ensembl chr 2:24,067,586...24,076,373 		JBrowse link
G SNIP1 Smad nuclear interacting protein 1 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr 1:37,534,449...37,554,293
Ensembl chr 1:37,534,449...37,554,293 		JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr15:101,281,510...101,295,248
Ensembl chr15:101,281,510...101,295,282 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr20:2,461,642...2,470,789
Ensembl chr20:2,461,634...2,470,853 		JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr20:16,730,026...16,742,564
Ensembl chr20:16,729,961...16,742,564 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr18:21,612,314...21,633,520
Ensembl chr18:21,612,314...21,633,524 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr19:45,687,454...45,692,316
Ensembl chr19:45,687,460...45,692,569 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr22:24,555,650...24,574,971
Ensembl chr22:24,555,958...24,582,052 		JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr 1:203,861,599...203,871,152
Ensembl chr 1:203,861,599...203,871,152 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr12:95,858,952...95,866,140
Ensembl chr12:95,858,952...95,903,828 		JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G involved_in NAS (PMID:31744343) ComplexPortal PMID:31744343 NCBI chr 2:70,281,362...70,293,740
Ensembl chr 2:70,281,362...70,293,740 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    metabolic process 12437
      primary metabolic process 10668
        RNA processing 1543
          mRNA processing 556
            mRNA splicing, via spliceosome 368
              alternative mRNA splicing, via spliceosome + 81
              mRNA cis splicing, via spliceosome + 53
              mRNA trans splicing, via spliceosome + 12
              negative regulation of mRNA splicing, via spliceosome + 27
              positive regulation of mRNA splicing, via spliceosome + 43
              regulation of mRNA splicing, via spliceosome + 126
              spliceosomal complex assembly + 109
              spliceosomal complex disassembly 3
              spliceosomal conformational changes to generate catalytic conformation + 6
              spliceosomal snRNP assembly + 57
              spliceosome-depend formation of circular RNA 0
Path 2
Term Annotations click to browse term
  biological_process 19612
    metabolic process 12437
      biosynthetic process 9260
        organic substance biosynthetic process 9195
          organic cyclic compound biosynthetic process 5671
            nucleobase-containing compound biosynthetic process 5400
              nucleic acid biosynthetic process 5096
                RNA biosynthetic process 4972
                  RNA processing 1543
                    RNA splicing 514
                      RNA splicing, via transesterification reactions 372
                        RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 368
                          mRNA splicing, via spliceosome 368
                            alternative mRNA splicing, via spliceosome + 81
                            mRNA cis splicing, via spliceosome + 53
                            mRNA trans splicing, via spliceosome + 12
                            negative regulation of mRNA splicing, via spliceosome + 27
                            positive regulation of mRNA splicing, via spliceosome + 43
                            regulation of mRNA splicing, via spliceosome + 126
                            spliceosomal complex assembly + 109
                            spliceosomal complex disassembly 3
                            spliceosomal conformational changes to generate catalytic conformation + 6
                            spliceosomal snRNP assembly + 57
                            spliceosome-depend formation of circular RNA 0
paths to the root