Rgs3 (regulator of G-protein signaling 3)

Gene: Rgs3 (regulator of G-protein signaling 3) Rattus norvegicus

Analyze

Symbol:

Rgs3

Name:

regulator of G-protein signaling 3

RGD ID:

3566

Description:

Predicted to enable GTPase regulator activity. Predicted to be involved in negative regulation of signal transduction. Predicted to be located in cytoplasm. Predicted to be active in nucleus and plasma membrane. Biomarker of bladder disease and lesion of sciatic nerve. Orthologous to human RGS3 (regulator of G protein signaling 3); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MGC93233; regulator of G-protein signalling 3; SRB-RGS

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	81,037,588 - 81,177,446 (+)	NCBI		GRCr8
mRatBN7.2	5	76,022,038 - 76,161,895 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	76,022,001 - 76,161,894 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	78,478,060 - 78,561,409 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	80,295,183 - 80,378,540 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	80,270,680 - 80,354,040 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	78,429,017 - 78,567,281 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	78,428,669 - 78,567,288 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	82,550,757 - 82,690,343 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	79,624,388 - 79,709,035 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	79,629,500 - 79,714,147 (+)	NCBI
Celera	5	75,018,488 - 75,101,807 (+)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

bladder disease (IEP)

Experimental Liver Cirrhosis (ISO)

lesion of sciatic nerve (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-demecolcine (ISO)

(1->4)-beta-D-glucan (ISO)

(S)-timolol (anhydrous) (ISO)

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-butoxyethanol (ISO)

2-palmitoylglycerol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-methylcholanthrene (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP,ISO)

afimoxifene (ISO)

aflatoxin B1 (EXP,ISO)

all-trans-retinoic acid (EXP)

ammonium chloride (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzene (EXP)

benzo[a]pyrene (EXP,ISO)

beta-hexachlorocyclohexane (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bromobenzene (EXP)

C60 fullerene (EXP)

cadmium dichloride (EXP)

calcitriol (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

chromium(6+) (ISO)

cisplatin (EXP,ISO)

cobalt atom (ISO)

crocidolite asbestos (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

diazinon (ISO)

dibenz[a,h]anthracene (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

diethyl malate (ISO)

dopamine (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

ethanol (ISO)

flavonoids (EXP)

fluoxetine (EXP)

folic acid (ISO)

FR900359 (ISO)

furan (EXP)

gentamycin (EXP)

hydrogen cyanide (ISO)

hydrogen peroxide (ISO)

menadione (ISO)

methidathion (ISO)

methylmercury chloride (ISO)

methylmercury(1+) (EXP)

monosodium L-glutamate (EXP)

N-nitrosodimethylamine (EXP)

ozone (EXP)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (EXP,ISO)

phenobarbital (ISO)

phenylephrine (ISO)

pirinixic acid (ISO)

potassium cyanide (ISO)

progesterone (ISO)

silicon dioxide (ISO)

sodium dichromate (EXP)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

tetraphene (ISO)

titanium dioxide (ISO)

tributylstannane (EXP)

trichloroethene (ISO)

trichostatin A (ISO)

Tungsten carbide (ISO)

valproic acid (ISO)

valsartan (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

nucleus (IBA,ISO)

plasma membrane (IBA,ISO)

Molecular Function

GTPase regulator activity (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

ephrin - ephrin receptor bidirectional signaling axis (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	High basal expression and injury-induced down regulation of two regulator of G-protein signaling transcripts, RGS3 and RGS4 in primary sensory neurons.	Costigan M, etal., Mol Cell Neurosci. 2003 Sep;24(1):106-16.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Molecular cloning and characterization of a steroid receptor-binding regulator of G-protein signaling protein cDNA.	Ikeda M, etal., Gene 2001 Aug 8;273(2):207-14.
5.	EGL-10 regulates G protein signaling in the C. elegans nervous system and shares a conserved domain with many mammalian proteins.	Koelle MR and Horvitz HR, Cell 1996 Jan 12;84(1):115-25.
6.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Receptor-selective effects of endogenous RGS3 and RGS5 to regulate mitogen-activated protein kinase activation in rat vascular smooth muscle cells.	Wang Q, etal., J Biol Chem 2002 Jul 12;277(28):24949-58.
12.	Identification of potential therapeutic targets in hypertension-associated bladder dysfunction.	Yono M, etal., BJU Int. 2010 Mar;105(6):877-83. doi: 10.1111/j.1464-410X.2009.08809.x. Epub 2009 Aug 18.

Additional References at PubMed

PMID:10702309	PMID:11034339	PMID:12062898	PMID:12477932	PMID:15458844	PMID:15489334	PMID:17541154	PMID:25931508

Genomics

Comparative Map Data

Rgs3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	81,037,588 - 81,177,446 (+)	NCBI		GRCr8
mRatBN7.2	5	76,022,038 - 76,161,895 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	76,022,001 - 76,161,894 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	78,478,060 - 78,561,409 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	80,295,183 - 80,378,540 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	80,270,680 - 80,354,040 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	78,429,017 - 78,567,281 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	78,428,669 - 78,567,288 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	82,550,757 - 82,690,343 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	79,624,388 - 79,709,035 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	79,629,500 - 79,714,147 (+)	NCBI
Celera	5	75,018,488 - 75,101,807 (+)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

RGS3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	113,444,730 - 113,597,738 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	113,444,731 - 113,597,743 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	116,207,010 - 116,360,018 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	115,246,832 - 115,399,839 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	113,435,753 - 113,439,571	NCBI
Celera	9	86,854,611 - 87,007,602 (+)	NCBI		Celera
Cytogenetic Map	9	q32	NCBI
HuRef	9	85,813,933 - 85,966,662 (+)	NCBI		HuRef
CHM1_1	9	116,353,638 - 116,506,463 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	125,643,547 - 125,796,339 (+)	NCBI		T2T-CHM13v2.0

Rgs3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	62,478,079 - 62,621,256 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	62,478,084 - 62,622,238 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	62,559,835 - 62,703,019 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	62,559,847 - 62,704,001 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	62,220,881 - 62,364,053 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	62,046,208 - 62,188,696 (+)	NCBI		MGSCv36	mm8
Celera	4	61,227,755 - 61,366,061 (+)	NCBI		Celera
Cytogenetic Map	4	B3	NCBI
cM Map	4	33.19	NCBI

Rgs3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	13,919,051 - 14,056,521 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	13,918,274 - 14,042,090 (-)	NCBI	ChiLan1.0	ChiLan1.0

RGS3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	25,779,028 - 25,933,046 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	25,781,387 - 25,935,478 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	84,561,302 - 84,696,534 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	112,929,604 - 113,065,746 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	112,927,407 - 113,065,746 (+)	Ensembl	panpan1.1		panPan2

RGS3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	67,781,832 - 67,878,153 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	67,781,962 - 67,920,075 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	66,186,531 - 66,324,166 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	68,906,019 - 69,044,294 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	68,923,206 - 69,044,285 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	67,424,053 - 67,562,277 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	67,455,234 - 67,593,195 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	68,210,062 - 68,330,325 (+)	NCBI		UU_Cfam_GSD_1.0

Rgs3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	183,085,781 - 183,161,654 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936559	112,375 - 180,737 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RGS3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	254,067,492 - 254,211,805 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	254,078,618 - 254,211,805 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	284,875,313 - 284,953,037 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RGS3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	25,985,782 - 26,118,393 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	25,985,723 - 26,117,343 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	16,686,032 - 16,825,304 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rgs3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624760	21,514,359 - 21,636,684 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rgs3
801 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	356
Count of miRNA genes:	200
Interacting mature miRNAs:	244
Transcripts:	ENSRNOT00000059183
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	1	90450412	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	1	131345958	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	729470	86724018	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
7394712	Emca13	Estrogen-induced mammary cancer QTL 13			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	9823266	99753708	Rat
634305	Mamtr1	Mammary tumor resistance QTL 1		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	12789751	113558310	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	31663789	131345958	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	33215665	78215665	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33215665	78215665	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	33215665	78215665	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	34730116	104251008	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	34944474	113558310	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	35189153	141643988	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40128307	148607290	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	43726656	86724018	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	43726656	129132602	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	46711509	161317411	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	47869062	90099692	Rat
9589025	Epfw7	Epididymal fat weight QTL 7	20.66	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	5	49463600	94463600	Rat
7411561	Bw134	Body weight QTL 134	24	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	49463600	94463600	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	50328551	141643988	Rat
2303615	Vencon7	Ventilatory control QTL 7		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	5	50983895	95983895	Rat
2303574	Gluco42	Glucose level QTL 42	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	53496719	98496719	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	55715622	100715622	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55805606	132207589	Rat
1358895	Bp254	Blood pressure QTL 254	3.6	0.0003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	58829236	128034027	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	59793399	143070159	Rat
2316954	Rf57	Renal function QTL 57	0		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	59793528	90450144	Rat
2316957	Pur21	Proteinuria QTL 21	6.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	5	59793528	113558156	Rat
61386	Bp49	Blood pressure QTL 49	16.6		cerebrum integrity trait (VT:0010549)	brain infarction volume (CMO:0001013)	5	60293434	98603051	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	60293434	161481680	Rat
2290005	Mcs24	Mammary carcinoma susceptibility QTL 24			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	64719390	109719390	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	66174080	124160948	Rat
2312671	Scl64	Serum cholesterol level QTL 64		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	68984307	104251008	Rat
61380	Edpm5	Estrogen-dependent pituitary mass QTL 5	4.5	0.92	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	5	68984307	104251008	Rat
1357396	Bw44	Body weight QTL 44	4.19		body mass (VT:0001259)	body weight (CMO:0000012)	5	68984307	104251008	Rat
1357402	Bw46	Body weight QTL 46	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	68984307	104251008	Rat
2302381	Bw84	Body weight QTL 84	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	68984307	104251008	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	69540295	151018848	Rat

Markers in Region

D3Rat120

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	5	82,611,942 - 82,612,198	UniSTS	Rnor5.0
RGSC_v3.4	5	79,629,452 - 79,629,709	RGD	RGSC3.4
RGSC_v3.4	5	79,629,453 - 79,629,709	UniSTS	RGSC3.4
RGSC_v3.1	5	79,634,565 - 79,634,822	RGD
Celera	5	75,023,580 - 75,023,822	UniSTS
Cytogenetic Map	5	q24	UniSTS

D5Uwm20

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	76,146,283 - 76,146,472 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	78,551,671 - 78,551,859	NCBI	Rnor6.0
Rnor_5.0	5	82,674,733 - 82,674,921	UniSTS	Rnor5.0
RGSC_v3.4	5	79,693,425 - 79,693,614	RGD	RGSC3.4
RGSC_v3.4	5	79,693,426 - 79,693,614	UniSTS	RGSC3.4
RGSC_v3.1	5	79,698,538 - 79,698,727	RGD
Celera	5	75,086,215 - 75,086,395	UniSTS
Cytogenetic Map	5	q24	UniSTS

RH141488

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	76,118,076 - 76,118,265 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	78,523,465 - 78,523,653	NCBI	Rnor6.0
Rnor_5.0	5	82,646,665 - 82,646,853	UniSTS	Rnor5.0
RGSC_v3.4	5	79,663,973 - 79,664,161	UniSTS	RGSC3.4
Celera	5	75,058,088 - 75,058,276	UniSTS
RH 3.4 Map	5	559.0	UniSTS
Cytogenetic Map	5	q24	UniSTS

BE098515

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	76,159,438 - 76,159,588 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	78,564,824 - 78,564,973	NCBI	Rnor6.0
Rnor_5.0	5	82,687,886 - 82,688,035	UniSTS	Rnor5.0
RGSC_v3.4	5	79,706,579 - 79,706,728	UniSTS	RGSC3.4
Celera	5	75,099,351 - 75,099,500	UniSTS
Cytogenetic Map	5	q24	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	34	10	5	14	5			68	22	39	11
Low		9	47	36	5	36	8	11	6	13	2		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001429681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_019340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB055153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC099453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U32434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000059181 ⟹ ENSRNOP00000055954

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	76,022,001 - 76,116,179 (+)	Ensembl
Rnor_6.0 Ensembl	5	78,483,904 - 78,521,567 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000059183 ⟹ ENSRNOP00000055956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	76,078,492 - 76,161,894 (+)	Ensembl
Rnor_6.0 Ensembl	5	78,483,893 - 78,567,279 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000080744 ⟹ ENSRNOP00000071774

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	76,022,001 - 76,161,894 (+)	Ensembl
Rnor_6.0 Ensembl	5	78,428,669 - 78,567,288 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000099793 ⟹ ENSRNOP00000093735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	76,158,469 - 76,161,888 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000107343 ⟹ ENSRNOP00000081496

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	76,041,973 - 76,161,894 (+)	Ensembl

RefSeq Acc Id:

NM_019340 ⟹ NP_062213

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,094,051 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,078,492 - 76,161,895 (+)	NCBI
Rnor_6.0	5	78,483,893 - 78,567,280 (+)	NCBI
Rnor_5.0	5	82,550,757 - 82,690,343 (+)	NCBI
RGSC_v3.4	5	79,624,388 - 79,709,035 (+)	RGD
Celera	5	75,018,488 - 75,101,807 (+)	RGD

Sequence:

show sequence

GGGAGAGCTGGGCTTTCATGGGGAGGCAGCTGAGGCAGGATCTGCAGCCATGAACCGCTTCAAT
GGGCTCTGCAAAGTGTGCTCAGAACGCCGCTACAGGCAGATCACCATCCGGAGGGGAAAAGACG
GCTTTGGCTTCACCATCTGCTGTGACTCTCCGGTCCGAGTCCAGGCTGTGGATTCTGGGGGCCC
AGCAGAGAGGGCGGGGCTGCAGCAGCTGGACACAGTACTACAGCTGAATGAGAGGCCCGTGGAA
CACTGGAAATGTGTGGAGCTGGCACACGAGATCCGGAGCTGTCCCAGCGAGATCATCCTGCTCG
TGTGGCGTGTGGTCCCCCAGATCAAGCCAGGGCCAGATGGCGGAGTCTTGAGGCGGGCCTCCTG
CAAGTCCACACATGATCTCCTGTCACCCCCTAACAAGAGGGAGAAGAACTGTACTCACGGGGCT
CCAACACGTCCCGAGCAGCGCCACAGCTGCCACCTGGTGTGCGACAGCTCTGATGGGCTACTGC
TCGGAGGCTGGGAGCGCTACACTGAGGTGGGCAAGCGCAGCGGCCAGCATACCCTGCCTGCACT
GTCCCGGGCCACCACCCCTACTGACCCCAACTACATCATCCTGGCCCCACTGAATCCTGGAAGC
CAGTTGCTGCGGCCTGTGTACCAGGAGGATGCCATCCCTGAAGAACCAGGGACTACTACTAAAG
GGAAATCGTACACTGGCCTGGGCAAGAAGTCTCGGTTGATGAAGACAGTGCAGACCATGAAGGG
CCACAGCAACTACCAAGATTGCTCAGCCCTGAGACCACACATCCCACATTCAAGTTACGGCACC
TATGTCACCCTGGCCCCCAAAGTCCTGGTATTCCCTGTCTTTGTGCAGCCCCTAGATCTCTGTA
ACCCTGCCCGGACTCTCCTGCTGTCAGAGGAGCTGCTGCTCTATGAGGGGAGGAACAAGACTTC
CCAGGTGACACTGTTTGCCTACTCGGACCTGCTGCTGTTCACTAAGGAGGAGGAACCAGGCCGC
TGTGACGTCCTGAGAAACCCCCTCTACCTCCAGAGTGTGAAGCTACAGGAGGGTTCTTCAGAAG
ACTTGAAATTCTGTGTGCTGTACCTGGCAGAGAAGGCAGAGTGCTTATTCACTTTGGAGGCTCA
CTCGCAGGAGCAGAAGAAGAGAGTGTGCTGGTGCCTGTCGGAGAACATCGCCAAGCAGCAACAG
CTGGCTGCAACACCTACGGAGAGGAAGATGTTTGAGACAGAGGCAGATGAGAAGGAGATGCCCC
TGGTCGAGGGGAAGGGGCCAGGTGCTGAGGAACGCACACCCAGCAAAGACCCCTCTCCCAGCCA
GGAGCTGCCTCCAGGACAAGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCT
CCAGGACAAGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACAAG
AACTCCCATCCAGCAAAAACCCCTCTCCCAGCCAGGAGCTTCCTGCAGGACAAGACCTCCCACC
CAGGAAGGAATCCTTTTCAGGCCAAGAAGCAGCTCCTGGCCCAGAGTCACCATCCAGTGAAGAC
ATAGCAACCTGCCAAAACCCCCCTCAAAGCCCAGAAACCTCAACAAGCAAGGACTCCCCACCAG
GCCAGGGATCCTCTCCAACCACAGAAGTCCCATCTTGCCAGGGACTTCCTGCTGGTCAAGAATC
TACAAGCCAGGACCCTCTGCTCAGTCAAGAGCCCCCTGCTATCCCAGAATCCTCTGCCTCCGAT
CAGAATGTTCTACCCTCTCAGGAGTCACCTCCCAGCCAGGGCTCCCTATCAGAGAAGGCCCTTG
CTGAGCAGACCATCAGCCCCGGGGAGCTACCAGCGGCCACTGCAGGTGAACCTTCAGCCTCCAG
ACCTAATTTTGTGATCCCCGAGGTCCGCCTGGATAGTGCCTACAGCCAGCAGGATGGAGCCCAT
GGAGGCAGCTCTGGTGAGGATGAGGATGCAGAAGAGGGAGAGGAGGGGGAAGAAGGGGAGGAAG
ATGAGGAGGACGACACCAACGACGACAACTACGGGGATCGTAATGAGGCCAAGCGCAGCAGCCT
GATTGAGACTGGCCAGGGCGCCGAGGGTGGCCTCTCGTTGCGTGTGCAGAACTCGCTGCGGCGC
CGGACGCACAGCGAGGGCAGCCTGCTGCAGGAGGCCCGTGGGCCCTGCTTTGCCTCTGACACCA
CCCTACACTGCTCTGATGGTGAGGGCACCACATCCACCTGGGCCATCCCTTCTCCCCGCACCCT
CAAAAAAGAACTGGGTCGTAATGGAGGCTCCATGCACCACCTTTCCCTGTTCTTCACTGGGCAC
AGGAAGATGAGTGGGACTGACCTCGCAGATGACGTTGAAGCCTCCCGGAAGAGAAAGAGCAAAA
ACATAGCCAAGGATATGAAGAATAAGCTGGCCATCTTCAGGCGGCGGAATGAATCTCCTGGGGC
CCAGCCAGCCGGCAAGGCAGACAAGACAACCAAGTCCTTCAAGCCTACCTCCGAGGAAGCCCTC
AAGTGGAGCGAGTCCCTGGAAAAGCTGCTGCTTCATAAATATGGCTTAGAAGTGTTCCAGGCCT
TCCTTCGCACAGAGTTCAGTGAGGAGAACCTGGAGTTTTGGCTGGCTTGTGAGGATTTCAAGAA
GGTCAAATCGCAGTCCAAGATGGCAGCCAAAGCCAAGAAGATCTTTGCTGAGTTCATCGCGATC
CAGGCTTGCAAGGAGGTAAACCTGGACTCGTACACACGAGAACACACTAAGGAGAACCTGCAGA
GCATCACCCGAGGCTGCTTTGACCTGGCACAAAAACGTATCTTCGGGCTCATGGAAAAGGACTC
TTACCCTCGCTTCCTCCGCTCTGACCTCTACCTGGACCTCATTAACCAGAAGAAGATGAGTCCC
CCACTCTAGGGACCACCAGTATCCAGCTCAGCGTTCACACCAAGCGGAGCGGGCTCCCTGCCCA
CCCGCCTCCCTTCCCTGTGACGGAGGGGACAAGTAAGCCCCCAGAGGCTGTGTCTCCGGACAGA
CAGATGGACATTTGAATTCGAGGCCTGGGCCGAGAGAGACCCAGGCCACTACAGGAAGTAGGAG
GACCAGCCGCATCGGGTCCTTAACGTCCTGGTACGAGGGGACCAAGGGCCCTGGCAGGTCAGGG
CCCTGGAGGAGCCAGATCGGGAGCTGTGGCTCCCTGCTTTGGAGATAATGGAGTCTTTACGCTG
ACCAAGTTCCTTTGAGAACTGGCTGGGGTTGGGACAGGAGGCCCAGGCCTGGGCTCAGGGTCCA
ACCTGGGGGGCTGTTGGGCCTCACAGCTCAGACCTTTCCCCATTGAGTTTTATTTATTTAAACA
GTAGTTGGATGCTTGGCACATGAACGGTAATAGGAGAGCCCTCACCCTGTCAGTTTTCTTAACT
TACAAGTGCAATGTCTTACCCAAGGCCTTGTGAAGGCCACCTGGAGGTGTGATCACCGTCTTAC
AGTTTCAGGGCATTTGCTGGTCCCAGGAACCAGTGGCGGCAGCTGGGCCTTCTAGACTGACATG
ACCTTGGAGGGGATGCTGCAGAAATCTGGCACCCACCCTGGGTGCCCAAGAGATCTGGGAAAGC
ATAGTGCCCTCCGGCCACACAGAAACAAGTGCTGGGGGCAAATAAAAGGCCTGTGTTATTCTCA
AAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006238260 ⟹ XP_006238322

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,057,615 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,042,138 - 76,161,895 (+)	NCBI
Rnor_6.0	5	78,447,541 - 78,567,281 (+)	NCBI
Rnor_5.0	5	82,550,757 - 82,690,343 (+)	NCBI

Sequence:

show sequence

CGCCCGCCCCGGAGTCGCTGGCGAGGTGTGGAACGGCTGAGCCTGCTTCCTGGGTTACCTGCAC
CCACATAACCACCACCTGGGGACAGGTCCTCCTGACCTGGCCGCAACGGGGACGCCATGGAGCG
CTCCCTGCACCGAGTCTCCCTCGGGAGCCGGCGCGCCCACCCGAACTTGTCCTTCTATCTCACC
ACCTTTGGTCAGCTGAAGCTGTCCATTGGTGCCCAGGATCGGGTTCTGCTGCTACACGTTATAG
AAGGCAAAGGCCTGATAAGCAAGAAGCCTGGCATCTGTGATCCCTATGTGAAGATTTCTTTGAT
CCCTGAAGACAGCCAGCTCTGCTGCCAGACAACGCAGGTCATTCGGGACTGCAGAGACCCAGCT
TTCCACGAGCACTTCTTCTTTCCTGTCCCAGAGGAGGGTGATCAGAAGCGTCTTCTAGTGACAG
TGTGGAACCAGGCCAGTGAGACCAGGCAGCATGCGCTCATTGGCTGCATGAGCTTTGGGGTGAG
GTCTCTCTTGACTCCGGACAAGGAGATCAGTGGCTGGTACTATCTGCTAGGGGAGGACCTGGGT
CGGACCAAGCACCTCAAGGTGGCTAGGCGGCGGCTCCAGCCACTGAGAGATGTGCTGTTGAGAA
TGCCAGGAGATGGGGACCCTGAGAATGGGGAGAAGCTCCAGATCACCATCCGGAGGGGAAAAGA
CGGCTTTGGCTTCACCATCTGCTGTGACTCTCCGGTCCGAGTCCAGGCTGTGGATTCTGGGGGC
CCAGCAGAGAGGGCGGGGCTGCAGCAGCTGGACACAGTACTACAGCTGAATGAGAGGCCCGTGG
AACACTGGAAATGTGTGGAGCTGGCACACGAGATCCGGAGCTGTCCCAGCGAGATCATCCTGCT
CGTGTGGCGTGTGGTCCCCCAGATCAAGCCAGGGCCAGATGGCGGAGTCTTGAGGCGGGCCTCC
TGCAAGTCCACACATGATCTCCTGTCACCCCCTAACAAGAGGGAGAAGAACTGTACTCACGGGG
CTCCAACACGTCCCGAGCAGCGCCACAGCTGCCACCTGGTGTGCGACAGCTCTGATGGGCTACT
GCTCGGAGGCTGGGAGCGCTACACTGAGGTGGGCAAGCGCAGCGGCCAGCATACCCTGCCTGCA
CTGTCCCGGGCCACCACCCCTACTGACCCCAACTACATCATCCTGGCCCCACTGAATCCTGGAA
GCCAGTTGCTGCGGCCTGTGTACCAGGAGGATGCCATCCCTGAAGAACCAGGGACTACTACTAA
AGGGAAATCGTACACTGGCCTGGGCAAGAAGTCTCGGTTGATGAAGACAGTGCAGACCATGAAG
GGCCACAGCAACTACCAAGATTGCTCAGCCCTGAGACCACACATCCCACATTCAAGTTACGGCA
CCTATGTCACCCTGGCCCCCAAAGTCCTGGTATTCCCTGTCTTTGTGCAGCCCCTAGATCTCTG
TAACCCTGCCCGGACTCTCCTGCTGTCAGAGGAGCTGCTGCTCTATGAGGGGAGGAACAAGACT
TCCCAGGTGACACTGTTTGCCTACTCGGACCTGCTGCTGTTCACTAAGGAGGAGGAACCAGGCC
GCTGCGACGTCCTGAGAAACCCCCTCTACCTCCAGAGTGTGAAGCTACAGGAGGGTTCTTCAGA
AGACTTGAAATTCTGTGTGCTGTACCTGGCAGAGAAGGCAGAGTGCTTATTCACTTTGGAGGCT
CACTCGCAGGAGCAGAAGAAGAGAGTGTGCTGGTGCCTGTCGGAGAACATCGCCAAGCAGCAAC
AGCTGGCTGCAACACCTACGGAGAGGAAGATGTTTGAGACAGAGGCAGATGAGAAGGAGATGCC
CCTGGTCGAGGGGAAGGGGCCAGGTGCTGAGGAACGCACACCCAGCAAAGACCCCTCTCCCAGC
CAGGAGCTGCCTCCAGGACAAGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGC
CTCCAGGACAAGACCTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACA
AGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTTCCTGCAGGACAAGACCTCCCA
CCCAGGAAGGAATCCTTTTCAGGCCAAGAAGCAGCTCCTGGCCCAGAGTCACCATCCAGTGAAG
ACATAGCAACCTGCCAAAACCCCCCTCAAAGCCCAGAAACCTCAACAAGCAAGGACTCCCCACC
AGGCCAGGGATCCTCTCCAACCACAGAAGTCCCATCTTGCCAGGGACTTCCTGCTGGTCAAGAA
TCTACAAGCCAGGACCCTCTGCTCAGTCAAGAGCCCCCTGCTATCCCAGAATCCTCTGCCTCCG
ATCAGAATGTTCTACCCTCTCAGGAGTCACCTCCCAGCCAGGGCTCCCTATCAGAGAAGGCCCT
TGCTGAGCAGACTATCAGCCCCGGGGAGCTACCAGCGGCCACTGCAGGTGAACCTTCAGCCTCC
AGACCTAATTTTGTGATCCCCGAGGTCCGCCTGGATAGTGCCTACAGCCAGCAGGACGGAGCCC
ATGGAGGCAGCTCTGGTGAGGATGAGGATGCAGAAGAGGGAGAGGAGGGGGAAGAAGGGGAGGA
AGATGAGGAGGACGACACCAGCGACGACAACTATGGGGATCGTAATGAGGCCAAGCGCAGCAGC
CTGATTGAGACTGGCCAGGGCGCCGAGGGTGGCCTCTCGTTGCGTGTGCAGAACTCGCTGCGGC
GCCGGACGCACAGCGAGGGCAGCCTGCTGCAGGAGGCCCGTGGGCCCTGCTTTGCCTCTGACAC
CACCCTACACTGCTCTGATGGTGAGGGCACCACATCCACCTGGGCCATCCCTTCTCCCCGCACC
CTCAAAAAAGAACTGGGTCGTAATGGAGGCTCCATGCACCACCTTTCCCTGTTCTTCACTGGGC
ACAGGAAGATGAGTGGGACTGACCTCGCAGATGACGTTGAAGCCTCCCGGAAGAGAAAGAGCAA
AAACATAGCCAAGGATATGAAGAATAAGCTGGCCATCTTCAGGCGGCGGAATGAATCTCCTGGG
GCCCAGCCAGCCGGCAAGGCAGACAAGACAACCAAGTCCTTCAAGCCTACCTCCGAGGAAGCCC
TCAAGTGGAGCGAGTCCCTGGAAAAGCTGCTGCTTCATAAATATGGCTTAGAAGTGTTCCAGGC
CTTTCTTCGCACAGAGTTCAGTGAGGAGAACCTGGAGTTTTGGCTGGCTTGTGAGGATTTCAAG
AAGGTCAAATCGCAGTCCAAGATGGCAGCCAAAGCCAAGAAGATCTTTGCTGAGTTCATCGCGA
TCCAGGCTTGCAAGGAGGTAAACCTGGACTCGTACACACGAGAACACACTAAGGAGAACCTGCA
GAGCATCACCCGAGGCTGCTTTGACCTGGCACAAAAACGTATCTTCGGGCTCATGGAAAAGGAC
TCTTACCCTCGCTTCCTCCGCTCTGACCTCTACCTGGACCTCATTAACCAGAAGAAGATGAGTC
CCCCACTCTAGGGACCACCAGTATCCAGCTCAGCGTTCACACCAAGCGGAGCGGGCTCCCTGCC
CACCCGCCTCCCTTCCCTGTGACGGAGGGGACAAGTAAGCCCCCAGAGGCTGTGTCTCCGGACA
GACAGATGGACATTTGAATTCGAGGCCTGGGCCGAGAGAGACCCAGGCCACTACAGGAAGTAGG
AGGACCAGCTGCATCGGGTCCTTAACGTCCTGGTACGAGGGGACCAAGGGCCCTGGCAGGTCAG
GGCCCTGGAGGAGCCAGATCGGGAGCTGTGGCTCCCTGCTTTGGAGATAATGGAGTCTTTACGC
TGACCAAGTTCCTTTGAGAACTGGCTGGGGTTGGGACAGGAGGCCCAGGCCTGGGCTCAGGGTC
CAACCTGGGGGGCTGTTGGGCCTCACAGCTCAGACCTTTCCCCATTGAGTTTTATTTATTTAAA
CAGTAGTTGGATGCTTGGCACATGAACGGTAATAGGAGAGCCCTCACCCTGTCAGTTTTCTTAA
CTTACAAGTGCAATGTCTTACCCAAGGCCTTGTGAAGGCCACCTGGAGGTGTGATCACCGTCTT
ACAGTTTCAGGGCATTTGCTGGTCCCAGGAACCAGTGGCGGCAGCTGGGCCTTCTAGACTGACA
TGACCTTGGAGGGGATGCTGCAGAAATCTGGCACCCACCCTGGGTGCCCAAGAGATCTGGGAAA
GCATAGTGCCCTCCGGCCACACAGAAACAAGTGCTGGGGGCAAATAAAAGGCCTGTGTTATTCT
CAT

hide sequence

RefSeq Acc Id:

XM_006238264 ⟹ XP_006238326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,057,673 - 81,139,312 (+)	NCBI
mRatBN7.2	5	76,042,119 - 76,123,754 (+)	NCBI
Rnor_6.0	5	78,447,527 - 78,523,819 (+)	NCBI
Rnor_5.0	5	82,550,757 - 82,690,343 (+)	NCBI

Sequence:

show sequence

CGGGCCCCGGATCCCGCCCGCCCCGGAGTCGCTGGCGAGGTGTGGAACGGCTGAGCCTGCTTCC
TGGGTTACCTGCACCCACATAACCACCACCTGGGGACAGGTCCTCCTGACCTGGCCGCAACGGG
GACGCCATGGAGCGCTCCCTGCACCGAGTCTCCCTCGGGAGCCGGCGCGCCCACCCGAACTTGT
CCTTCTATCTCACCACCTTTGGTCAGCTGAAGCTGTCCATTGGTGCCCAGGATCGGGTTCTGCT
GCTACACGTTATAGAAGGCAAAGGCCTGATAAGCAAGAAGCCTGGCATCTGTGATCCCTATGTG
AAGATTTCTTTGATCCCTGAAGACAGCCAGCTCTGCTGCCAGACAACGCAGGTCATTCGGGACT
GCAGAGACCCAGCTTTCCACGAGCACTTCTTCTTTCCTGTCCCAGAGGAGGGTGATCAGAAGCG
TCTTCTAGTGACAGTGTGGAACCAGGCCAGTGAGACCAGGCAGCATGCGCTCATTGGCTGCATG
AGCTTTGGGGTGAGGTCTCTCTTGACTCCGGACAAGGAGATCAGTGGCTGGTACTATCTGCTAG
GGGAGGACCTGGGTCGGACCAAGCACCTCAAGGTGGCTAGGCGGCGGCTCCAGCCACTGAGAGA
TGTGCTGTTGAGAATGCCAGGAGATGGGGACCCTGAGAATGGGGAGAAGCTCCAGATCACCATC
CGGAGGGGAAAAGACGGCTTTGGCTTCACCATCTGCTGTGACTCTCCGGTCCGAGTCCAGGCTG
TGGATTCTGGGGGCCCAGCAGAGAGGGCGGGGCTGCAGCAGCTGGACACAGTACTACAGCTGAA
TGAGAGGCCCGTGGAACACTGGAAATGTGTGGAGCTGGCACACGAGATCCGGAGCTGTCCCAGC
GAGATCATCCTGCTCGTGTGGCGTGTGGTCCCCCAGATCAAGCCAGGGCCAGATGGCGGAGTCT
TGAGGCGGGCCTCCTGCAAGTCCACACATGATCTCCTGTCACCCCCTAACAAGAGGGAGAAGAA
CTGTACTCACGGGGCTCCAACACGTCCCGAGCAGCGCCACAGCTGCCACCTGGTGTGCGACAGC
TCTGATGGGCTACTGCTCGGAGGCTGGGAGCGCTACACTGAGGTGGGCAAGCGCAGCGGCCAGC
ATACCCTGCCTGCACTGTCCCGGGCCACCACCCCTACTGACCCCAACTACATCATCCTGGCCCC
ACTGAATCCTGGAAGCCAGTTGCTGCGGCCTGTGTACCAGGAGGATGCCATCCCTGAAGAACCA
GGGACTACTACTAAAGGGAAATCGTACACTGGCCTGGGCAAGAAGTCTCGGTTGATGAAGACAG
TGCAGACCATGAAGGGCCACAGCAACTACCAAGATTGCTCAGCCCTGAGACCACACATCCCACA
TTCAAGTTACGGCACCTATGTCACCCTGGCCCCCAAAGTCCTGGTATTCCCTGTCTTTGTGCAG
CCCCTAGATCTCTGTAACCCTGCCCGGACTCTCCTGCTGTCAGAGGAGCTGCTGCTCTATGAGG
GGAGGAACAAGACTTCCCAGGTGACACTGTTTGCCTACTCGGACCTGCTGCTGTTCACTAAGGA
GGAGGAACCAGGCCGCTGCGACGTCCTGAGAAACCCCCTCTACCTCCAGAGTGTGAAGCTACAG
GAGGGTTCTTCAGAAGACTTGAAATTCTGTGTGCTGTACCTGGCAGAGAAGGCAGAGTGCTTAT
TCACTTTGGAGGCTCACTCGCAGGAGCAGAAGAAGAGAGTGTGCTGGTGCCTGTCGGAGAACAT
CGCCAAGCAGCAACAGCTGGCTGCAACACCTACGGAGAGGAAGAAACTTCACCCTTACGGCTCT
CTCCAGCAGGAGATGGGGCCAGTCACCTCCATCAATGCCACCCAGGATAGAAGCTTTACCTCAT
CAGGACAGACTCTGATTGGCTGAGCAAGCCCAAGGGCGGGACTATGCTTCTGGCAACTTTGGGG
CTTCCCCTATCACACAGTAACCTCATCTCAACTGGACCCAAAACAGAAGACCAAGATGGTGGGC
CTAGGGTCATCTGGAGGGAGTGGTCCCATGGGTGTGTGTGCACCTGGCAACAGGAGGAACAGTG
GTATGAGAGACCCTGTGGGTTTGTGCAGACTGGTACCAGGAAGTCCTGGATGGAGAAGACGCCA
AAGCAAGCTCCCTTCAGGAGGCTAAATGGCACCTGGGCACCTTCCTGGGCACAGCAGGAAAGAG
GGAGAGGGCACTCAAATGGAAGACAATGCCTGTGACTCATTCCTGCCGGAAGATATCTCCCCTT
CCCACTCCTATTTCAAATGGATTCATTTACATCCTCAGTCAGCGGGTGCTGGGGGACATCTCCT
TTGTGCTAGTGTGTATGCTAGAGGATGCTGTGCTCCCACCAGGATCCCAGCCTTCCCTGTCCCG
GTAGGGAGACAGCACTAAATAAATCCACACTGAAACATGACCACACACTGCAGGAGTCTGTACA
GAAACACCACAGGGCATTATGTCTAGTTGCTATGTGTGGGGTGTGAAGGGGAATAGCTCGAGGT
GAGGTCTATGAGCTGGAAAGGAGCTAGCCAGTCAAGGACTTTGGAGAGAGCATTCCAGGCAGTG
GAAAACGCACAGGAAGAGACAAGAAGGAGGGGGCATGGTGTGCTGAGGAACAGAGGGAGGCTGG
TGTAGCAGCAGCTTTGTGAGGAGGAGAATGGAGCCAGGTCATGCTATTCAGGACATAGACCGTG
ATTGCTTTGTGGATTCCTACCTACAGTAGGGGGCCGTGGAAGAAAGGCTTGAGGAAGGGTGTCA
CAGAGTCCTCCAGTGCATGTCTACAAGATCAGACTGCAGTTAGGAGGGGCCCGAGTGGCTGTGA
GACTGGTTAGGACTCCCCTTCAGGCCTCTCGGGTGAGGGATGATGGTAACTTGTTCTAGAGGGT
GCTGGGATGATAGGTCTTGGAAAGGTAATCTCTGGGATAAAGAGTGACTGCTCACCCTTGCCTG
CCCTCGTGCTCCACTGGGTCTTGCTCTCTCTCTGGGTGTGAGGTTTGAGGTCTCCCTCCTAGAG
ACTCCTCTGCCCAGGCCAGAGCTTGAGCCAGTGTTGAGCCTTGGGGATGTCCACGAGCACTGGA
ACAGTAAAGCTTAATTTTCTCAAGATGGGAAAGGAAGGTTCACATTTCCCCTGCTCCCAGGCTC
CATAGAGATCGCCTGTATTTGCTCTACCTTTCGTGCCAAGGGAAGGAAGCCGGGGCCTTGCACT
CTGAGAACTCCCACTTTTTTGCTTTCTGTAGGGCTTCTAAGGGCCAGGGACCAGTGGCCAGGGC
CAGATGCAGCTCAGCAATCTTCACTGAGACAAGGTGAAAGGTGCCCACGCCCAGTGATGAGAGC
TGGGTCCACTCCCATCCACCCAGATGGGGCTCTGGACAAGGTAGCTCACCCTTTTCTAACTGTA
GAGATCCAGCAGGACAGAATCTCAAGGCTGTGGATCAGAGGGACAAGGGCCATATGCTAGAGAG
GTAACGAGGGCTCAGAGACAGAAAGCTACAGTGATAGCTAAGGCCGAAGAAGGCCCCAGCCTTC
GTCATAAGGACCTTAAGGAAGATGCTGTGCTCTTTGGGGTTTGCTAACTGCTAGAGCCACCTGA
ACCCCTAAAGAGTGGCCCAGGAGAGAGTTTGTCCCTTATTTTCCGTTCCTCTTCCTTCCGACAT
TGGACATGTGTGCCAAGCTGAGTTATCGGTCTCATGGGGAGTGGCGTGAATCCGCAGGGATCAG
GCTAATGCCCAGCCCAGCGAGCAGAGATTGACGCAGTTCAAGGGATGTGTAGCACCACACCGCC
GGCCAATGATCAGCCCGCAGGGTGATTCCGAGCAGCCGGGTCTGTGCAGACAGCAAACTACGCT
TTGATTTCATTTGGTTCTCTCACCTAACGACTGTAAGTTCATGAAGCACAGGAGAACCACCTGT
GTGGGGAATCAGCCGTCTTGTCTCACCCGGGTCCGGCGACCAACCTCTGTCTGACAGATGGGTA
CAGAAGACGTAAGAGCTCTTGACTCAGAAAAATGGAGGCTCCGAACGTAACACCCATCCCTGAG
GATGGGCCGTTCTCCTCCTGATAAGCTCCTCCTGAGTAGAATAGATTCTCCATCAAGCTCCCAG
GCCTGCTGGCTGATGGGGAAGAAAACATTTGCTCCTGGCAGGTCCTGGGCTAGCTTGCTCCGTG
ACTGTGGTGTGTCACAGCACTATGGCCATCTTGCTTCATCAATCAATGGGACAATTCATTTGGT
GTCATGGGCCCAAGAAGATGAAATATGACCTGGTGGCCTCCACTCTTCAGTCTATCCCAGCCAT
TCAAGAGGAAGAACAGTTCTCAACGTTGCCTCAGAGAGTCATAATCACGGGAAACATGGCCGGG
CTCCTCCCTGACACGTAAATCACGCTAAGAGGCACACAATGACTTCTTTCCTGATGGGCTGATG
GTCTTGGGTGGTGTCTCTGGCCCAGGAGCTGGGAGGATGGGAGCACAACCACTTTATTGTTGAG
AGGCCATCTGTGAGATCTGAATACAAAGTGCCCCTTCTAGTCTCCTACGTGTTCTTGGATCCCA
TTTCTGGGTCTCTGGGCTCTGAGTCCTTTGAACCCCATTTCTCATATAAGCCGTCATGCCTGAG
TCTTTCGGCCCTTTGGGAGCTGGAATTACAGACCTTCTGAGAATGGTGATA

hide sequence

RefSeq Acc Id:

XM_006238265 ⟹ XP_006238327

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,093,319 - 81,139,312 (+)	NCBI
mRatBN7.2	5	76,077,759 - 76,123,754 (+)	NCBI
Rnor_6.0	5	78,481,697 - 78,523,819 (+)	NCBI
Rnor_5.0	5	82,550,757 - 82,690,343 (+)	NCBI

Sequence:

show sequence

CCTCTCTCTTCCTTTCTTTTGGCTTTAGAAATAGAGTCCTCCCTTCCCTCAGGTCCCCAGAACC
TGTGTGTCTTAGAACCATGGCCAAGTCATCTTCACAGGTTAAGCCCCGCTGGTGCTGGGAAAGC
AGCCACACATAACTCTGAACCTGAAAACGATGGATGACTTCCTACCAGCTGTTAATCCAGAGAG
GAACACCATATAGGGATTTGGGTGAATTGTCCAAAGTTCATTCGATCTCTTTGGAGAACCTGTC
ATGGATGACTCATGGTTTTCTTTAATAGGAGAAGGAAAATCAAACTCTCCACGATCAATTGGCC
CCTGGGGTGATATTGTGATCTAACTTTCATCACCTCCTGTGAGGTGGCTGTCACCACCCCATCT
AACAGATAAGGGGACTTATTGATCCCAGGCTGTTATGTCACTGTGGCCACACAACCAGCGAGAG
GTTGGCAGAGTCTCTTTATCTCTTCTGTGCACCGTGCCACACTGTCTCTAGAGTGTGTCCTCAC
CAAGAAGACACGTGATGTTGGTGTTGGCATACTCCTTGACCTTTTGTGTTGAAATTAGCCCCTT
GGGTGCTATTGTACACCCATTCATCCAAACTGTTTTATACTGTGGGGTAGTTAGACCCGTGAGC
ACCCAGCCTGGTGCTGGGGTCTGGGACAGAGCCTTGGCTCACTCCTTTGTGGAACATACAGTTC
AGAATATCACTCCCATCACAGTAGCTGTTTGCTTGCCTGCAGCTTCTGAGTGCCTGCTGTAGCA
AGCAGTACTGAGGGCAGAGCCACAACTTCTATTTCACGTTAGGTAATGTCATTGTGTCCTGTAC
AAACAACCAGCCCCCACTGTAGTGCTAGGGTAATCTGCCAGGCAAGTGCTTTACCCCCAGATGT
GTTTTCTATGGTTTCACTAGGAGTTTAGAAGCCTCCTCTAGCTTCAGGGATCGTTCCAAAGATC
TCCCCATTCTCTGTGGGGAGGGAGTGACCACAGAGTCACCCTAGGAATATGTGGGAATGACTTG
GATATCTGTATTGCAGGTCTCTAGGTAGCCTGGGAAAGACCTGCTTTGTGCTAGATCCTGCCTA
CTGTTCCATGTCCCCAAGGATACTGTTCTGAATTGAATAGGATTTAGGGTTTTGTGCATCTGAT
GATGTCCACAGTGCTCAGCACCAACAGTGACTGGCAGAGGTGTGGGGAAATGAGAGAGAGGTCA
CTTATTCAGATCCTCCATTCGAAAGACCTAGAGGTAGCTTAGCACAGTGGCAGTATCTTAGCCA
ATGAGGTTTATCCGAGGCACGATTATGGCTAATCAAAAGACCTAGAGGTGTAGGTCACCTACCC
AGGGTCACTCAGCAATCAAGCCAAGGGACAGCCTCTGCTCTGGGTACATGAGTGAGCAGATGGG
CTTTTCAAGGGACTCATAGGAGGGGGGGGGCTGGGTTCATGCTGTGCTACTTACAAGACCTGAT
CCTGGGACTGCAAGGTACTGAGTGCAGGGCCTGGGTTCTAACCTGGCGTTTGACTGAAACCTCT
CTAGGCTTCCACTTCTTTGTTGTTACGATGTGGAGGAGGTGCCCTCATGGCTGGAAACCCATTT
GCACATTTGACCGTATGGTCTGCGTGCCATCAGTTCCTTCACATAGCCCATTTTTGTGAATCCA
GAAGCTGGCTTTTAAGTAGCTCCCGAGTGCCCACCAGTCTCCAGGTGTTTTGTATTCCCTGACT
TAAGATGGGTTGTTTATGGGTATAGTGTTCACAGCAGCCCAGATTGTCCCCACTGGGTTAGCCT
ACTGGATTTGCTCCTAGGGACCCTGGGACTTGCAAGGAGGCGTGCTGTTGTTACAGAACAGGGT
GTGTTTTCTGCACGAGTTTCCCTCCAGCAGGCAGTAAGGGCTGTTTGTGAGAACACTGCTTTCA
CAGAGTGGCCCAGGGCAGAGAACGCAGCCAGAACAAAGGCGCCCTCTCCCAGCCAGGCCGGAGG
AATACTAACTAGTTGACAGGAATTTTAATATAAAACTCTCCCTCTTCCTTGTCATTCTGAGGTT
TCAGGAAGCCTTCGGGCTTATCTGCAGAGGCACACAGCACAGACAGGGCTTGGGGAGGTGAGGG
GTGATTTCCTGCTATTCTTTTGAGGGGCGGGCTTCCCAGGGCGGTCATGCCAGGCTGACGGGCA
GTGTGGGCTCCAGCTACTGGGGGAGAGCTGGGCTTTCATGGGGAGGCAGCTGAGGCAGGATCTG
CAGCCATGAACCGCTTCAATGGGCTCTGCAAAGTGTGCTCAGAACGCCGCTACAGGCAGATCAC
CATCCGGAGGGGAAAAGACGGCTTTGGCTTCACCATCTGCTGTGACTCTCCGGTCCGAGTCCAG
GCTGTGGATTCTGGGGGCCCAGCAGAGAGGGCGGGGCTGCAGCAGCTGGACACAGTACTACAGC
TGAATGAGAGGCCCGTGGAACACTGGAAATGTGTGGAGCTGGCACACGAGATCCGGAGCTGTCC
CAGCGAGATCATCCTGCTCGTGTGGCGTGTGGTCCCCCAGATCAAGCCAGGGCCAGATGGCGGA
GTCTTGAGGCGGGCCTCCTGCAAGTCCACACATGATCTCCTGTCACCCCCTAACAAGAGGGAGA
AGAACTGTACTCACGGGGCTCCAACACGTCCCGAGCAGCGCCACAGCTGCCACCTGGTGTGCGA
CAGCTCTGATGGGCTACTGCTCGGAGGCTGGGAGCGCTACACTGAGGTGGGCAAGCGCAGCGGC
CAGCATACCCTGCCTGCACTGTCCCGGGCCACCACCCCTACTGACCCCAACTACATCATCCTGG
CCCCACTGAATCCTGGAAGCCAGTTGCTGCGGCCTGTGTACCAGGAGGATGCCATCCCTGAAGA
ACCAGGGACTACTACTAAAGGGAAATCGTACACTGGCCTGGGCAAGAAGTCTCGGTTGATGAAG
ACAGTGCAGACCATGAAGGGCCACAGCAACTACCAAGATTGCTCAGCCCTGAGACCACACATCC
CACATTCAAGTTACGGCACCTATGTCACCCTGGCCCCCAAAGTCCTGGTATTCCCTGTCTTTGT
GCAGCCCCTAGATCTCTGTAACCCTGCCCGGACTCTCCTGCTGTCAGAGGAGCTGCTGCTCTAT
GAGGGGAGGAACAAGACTTCCCAGGTGACACTGTTTGCCTACTCGGACCTGCTGCTGTTCACTA
AGGAGGAGGAACCAGGCCGCTGCGACGTCCTGAGAAACCCCCTCTACCTCCAGAGTGTGAAGCT
ACAGGAGGGTTCTTCAGAAGACTTGAAATTCTGTGTGCTGTACCTGGCAGAGAAGGCAGAGTGC
TTATTCACTTTGGAGGCTCACTCGCAGGAGCAGAAGAAGAGAGTGTGCTGGTGCCTGTCGGAGA
ACATCGCCAAGCAGCAACAGCTGGCTGCAACACCTACGGAGAGGAAGAAACTTCACCCTTACGG
CTCTCTCCAGCAGGAGATGGGGCCAGTCACCTCCATCAATGCCACCCAGGATAGAAGCTTTACC
TCATCAGGACAGACTCTGATTGGCTGAGCAAGCCCAAGGGCGGGACTATGCTTCTGGCAACTTT
GGGGCTTCCCCTATCACACAGTAACCTCATCTCAACTGGACCCAAAACAGAAGACCAAGATGGT
GGGCCTAGGGTCATCTGGAGGGAGTGGTCCCATGGGTGTGTGTGCACCTGGCAACAGGAGGAAC
AGTGGTATGAGAGACCCTGTGGGTTTGTGCAGACTGGTACCAGGAAGTCCTGGATGGAGAAGAC
GCCAAAGCAAGCTCCCTTCAGGAGGCTAAATGGCACCTGGGCACCTTCCTGGGCACAGCAGGAA
AGAGGGAGAGGGCACTCAAATGGAAGACAATGCCTGTGACTCATTCCTGCCGGAAGATATCTCC
CCTTCCCACTCCTATTTCAAATGGATTCATTTACATCCTCAGTCAGCGGGTGCTGGGGGACATC
TCCTTTGTGCTAGTGTGTATGCTAGAGGATGCTGTGCTCCCACCAGGATCCCAGCCTTCCCTGT
CCCGGTAGGGAGACAGCACTAAATAAATCCACACTGAAACATGACCACACACTGCAGGAGTCTG
TACAGAAACACCACAGGGCATTATGTCTAGTTGCTATGTGTGGGGTGTGAAGGGGAATAGCTCG
AGGTGAGGTCTATGAGCTGGAAAGGAGCTAGCCAGTCAAGGACTTTGGAGAGAGCATTCCAGGC
AGTGGAAAACGCACAGGAAGAGACAAGAAGGAGGGGGCATGGTGTGCTGAGGAACAGAGGGAGG
CTGGTGTAGCAGCAGCTTTGTGAGGAGGAGAATGGAGCCAGGTCATGCTATTCAGGACATAGAC
CGTGATTGCTTTGTGGATTCCTACCTACAGTAGGGGGCCGTGGAAGAAAGGCTTGAGGAAGGGT
GTCACAGAGTCCTCCAGTGCATGTCTACAAGATCAGACTGCAGTTAGGAGGGGCCCGAGTGGCT
GTGAGACTGGTTAGGACTCCCCTTCAGGCCTCTCGGGTGAGGGATGATGGTAACTTGTTCTAGA
GGGTGCTGGGATGATAGGTCTTGGAAAGGTAATCTCTGGGATAAAGAGTGACTGCTCACCCTTG
CCTGCCCTCGTGCTCCACTGGGTCTTGCTCTCTCTCTGGGTGTGAGGTTTGAGGTCTCCCTCCT
AGAGACTCCTCTGCCCAGGCCAGAGCTTGAGCCAGTGTTGAGCCTTGGGGATGTCCACGAGCAC
TGGAACAGTAAAGCTTAATTTTCTCAAGATGGGAAAGGAAGGTTCACATTTCCCCTGCTCCCAG
GCTCCATAGAGATCGCCTGTATTTGCTCTACCTTTCGTGCCAAGGGAAGGAAGCCGGGGCCTTG
CACTCTGAGAACTCCCACTTTTTTGCTTTCTGTAGGGCTTCTAAGGGCCAGGGACCAGTGGCCA
GGGCCAGATGCAGCTCAGCAATCTTCACTGAGACAAGGTGAAAGGTGCCCACGCCCAGTGATGA
GAGCTGGGTCCACTCCCATCCACCCAGATGGGGCTCTGGACAAGGTAGCTCACCCTTTTCTAAC
TGTAGAGATCCAGCAGGACAGAATCTCAAGGCTGTGGATCAGAGGGACAAGGGCCATATGCTAG
AGAGGTAACGAGGGCTCAGAGACAGAAAGCTACAGTGATAGCTAAGGCCGAAGAAGGCCCCAGC
CTTCGTCATAAGGACCTTAAGGAAGATGCTGTGCTCTTTGGGGTTTGCTAACTGCTAGAGCCAC
CTGAACCCCTAAAGAGTGGCCCAGGAGAGAGTTTGTCCCTTATTTTCCGTTCCTCTTCCTTCCG
ACATTGGACATGTGTGCCAAGCTGAGTTATCGGTCTCATGGGGAGTGGCGTGAATCCGCAGGGA
TCAGGCTAATGCCCAGCCCAGCGAGCAGAGATTGACGCAGTTCAAGGGATGTGTAGCACCACAC
CGCCGGCCAATGATCAGCCCGCAGGGTGATTCCGAGCAGCCGGGTCTGTGCAGACAGCAAACTA
CGCTTTGATTTCATTTGGTTCTCTCACCTAACGACTGTAAGTTCATGAAGCACAGGAGAACCAC
CTGTGTGGGGAATCAGCCGTCTTGTCTCACCCGGGTCCGGCGACCAACCTCTGTCTGACAGATG
GGTACAGAAGACGTAAGAGCTCTTGACTCAGAAAAATGGAGGCTCCGAACGTAACACCCATCCC
TGAGGATGGGCCGTTCTCCTCCTGATAAGCTCCTCCTGAGTAGAATAGATTCTCCATCAAGCTC
CCAGGCCTGCTGGCTGATGGGGAAGAAAACATTTGCTCCTGGCAGGTCCTGGGCTAGCTTGCTC
CGTGACTGTGGTGTGTCACAGCACTATGGCCATCTTGCTTCATCAATCAATGGGACAATTCATT
TGGTGTCATGGGCCCAAGAAGATGAAATATGACCTGGTGGCCTCCACTCTTCAGTCTATCCCAG
CCATTCAAGAGGAAGAACAGTTCTCAACGTTGCCTCAGAGAGTCATAATCACGGGAAACATGGC
CGGGCTCCTCCCTGACACGTAAATCACGCTAAGAGGCACACAATGACTTCTTTCCTGATGGGCT
GATGGTCTTGGGTGGTGTCTCTGGCCCAGGAGCTGGGAGGATGGGAGCACAACCACTTTATTGT
TGAGAGGCCATCTGTGAGATCTGAATACAAAGTGCCCCTTCTAGTCTCCTACGTGTTCTTGGAT
CCCATTTCTGGGTCTCTGGGCTCTGAGTCCTTTGAACCCCATTTCTCATATAAGCCGTCATGCC
TGAGTCTTTCGGCCCTTTGGGAGCTGGAATTACAGACCTTCTGAGAATGGTGATA

hide sequence

RefSeq Acc Id:

XM_008763801 ⟹ XP_008762023

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,146,386 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,133,480 - 76,161,895 (+)	NCBI
Rnor_6.0	5	78,538,902 - 78,567,281 (+)	NCBI

Sequence:

show sequence

CGCTTGACACGGCCGGCCGGCTGCCTGCCCGCCCGCCCGCCCTCGGGAGGAGCCGGGTGGAGCC
CCAGGGCGGGTGGCCGGCAGGAGCTGCAGCAGCTAGGAGTTGCCTGGGTCCTTGCTGGAGTGTG
CTGGATGTTTGAGACAGAGGCAGATGAGAAGGAGATGCCCCTGGTCGAGGGGAAGGGGCCAGGT
GCTGAGGAACGCACACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACAAGAAC
TCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACAAGACCTCCCACCCAG
CAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACAAGAACTCCCACCCAGCAAAGACCCC
TCTCCCAGCCAGGAGCTTCCTGCAGGACAAGACCTCCCACCCAGGAAGGAATCCTTTTCAGGCC
AAGAAGCAGCTCCTGGCCCAGAGTCACCATCCAGTGAAGACATAGCAACCTGCCAAAACCCCCC
TCAAAGCCCAGAAACCTCAACAAGCAAGGACTCCCCACCAGGCCAGGGATCCTCTCCAACCACA
GAAGTCCCATCTTGCCAGGGACTTCCTGCTGGTCAAGAATCTACAAGCCAGGACCCTCTGCTCA
GTCAAGAGCCCCCTGCTATCCCAGAATCCTCTGCCTCCGATCAGAATGTTCTACCCTCTCAGGA
GTCACCTCCCAGCCAGGGCTCCCTATCAGAGAAGGCCCTTGCTGAGCAGACTATCAGCCCCGGG
GAGCTACCAGCGGCCACTGCAGGTGAACCTTCAGCCTCCAGACCTAATTTTGTGATCCCCGAGG
TCCGCCTGGATAGTGCCTACAGCCAGCAGGACGGAGCCCATGGAGGCAGCTCTGGTGAGGATGA
GGATGCAGAAGAGGGAGAGGAGGGGGAAGAAGGGGAGGAAGATGAGGAGGACGACACCAGCGAC
GACAACTATGGGGATCGTAATGAGGCCAAGCGCAGCAGCCTGATTGAGACTGGCCAGGGCGCCG
AGGGTGGCCTCTCGTTGCGTGTGCAGAACTCGCTGCGGCGCCGGACGCACAGCGAGGGCAGCCT
GCTGCAGGAGGCCCGTGGGCCCTGCTTTGCCTCTGACACCACCCTACACTGCTCTGATGGTGAG
GGCACCACATCCACCTGGGCCATCCCTTCTCCCCGCACCCTCAAAAAAGAACTGGGTCGTAATG
GAGGCTCCATGCACCACCTTTCCCTGTTCTTCACTGGGCACAGGAAGATGAGTGGGACTGACCT
CGCAGATGACGTTGAAGCCTCCCGGAAGAGAAAGAGCAAAAACATAGCCAAGGATATGAAGAAT
AAGCTGGCCATCTTCAGGCGGCGGAATGAATCTCCTGGGGCCCAGCCAGCCGGCAAGGCAGACA
AGACAACCAAGTCCTTCAAGCCTACCTCCGAGGAAGCCCTCAAGTGGAGCGAGTCCCTGGAAAA
GCTGCTGCTTCATAAATATGGCTTAGAAGTGTTCCAGGCCTTTCTTCGCACAGAGTTCAGTGAG
GAGAACCTGGAGTTTTGGCTGGCTTGTGAGGATTTCAAGAAGGTCAAATCGCAGTCCAAGATGG
CAGCCAAAGCCAAGAAGATCTTTGCTGAGTTCATCGCGATCCAGGCTTGCAAGGAGGTAAACCT
GGACTCGTACACACGAGAACACACTAAGGAGAACCTGCAGAGCATCACCCGAGGCTGCTTTGAC
CTGGCACAAAAACGTATCTTCGGGCTCATGGAAAAGGACTCTTACCCTCGCTTCCTCCGCTCTG
ACCTCTACCTGGACCTCATTAACCAGAAGAAGATGAGTCCCCCACTCTAGGGACCACCAGTATC
CAGCTCAGCGTTCACACCAAGCGGAGCGGGCTCCCTGCCCACCCGCCTCCCTTCCCTGTGACGG
AGGGGACAAGTAAGCCCCCAGAGGCTGTGTCTCCGGACAGACAGATGGACATTTGAATTCGAGG
CCTGGGCCGAGAGAGACCCAGGCCACTACAGGAAGTAGGAGGACCAGCTGCATCGGGTCCTTAA
CGTCCTGGTACGAGGGGACCAAGGGCCCTGGCAGGTCAGGGCCCTGGAGGAGCCAGATCGGGAG
CTGTGGCTCCCTGCTTTGGAGATAATGGAGTCTTTACGCTGACCAAGTTCCTTTGAGAACTGGC
TGGGGTTGGGACAGGAGGCCCAGGCCTGGGCTCAGGGTCCAACCTGGGGGGCTGTTGGGCCTCA
CAGCTCAGACCTTTCCCCATTGAGTTTTATTTATTTAAACAGTAGTTGGATGCTTGGCACATGA
ACGGTAATAGGAGAGCCCTCACCCTGTCAGTTTTCTTAACTTACAAGTGCAATGTCTTACCCAA
GGCCTTGTGAAGGCCACCTGGAGGTGTGATCACCGTCTTACAGTTTCAGGGCATTTGCTGGTCC
CAGGAACCAGTGGCGGCAGCTGGGCCTTCTAGACTGACATGACCTTGGAGGGGATGCTGCAGAA
ATCTGGCACCCACCCTGGGTGCCCAAGAGATCTGGGAAAGCATAGTGCCCTCCGGCCACACAGA
AACAAGTGCTGGGGGCAAATAAAAGGCCTGTGTTATTCTCAT

hide sequence

RefSeq Acc Id:

XM_008763802 ⟹ XP_008762024

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,146,386 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,132,987 - 76,161,895 (+)	NCBI
Rnor_6.0	5	78,537,274 - 78,567,281 (+)	NCBI

Sequence:

show sequence

GGGGGGGACACAGATGGACAGGCAGAGTAGAGAGAGACTGGGAACAGGCAGGGCCACTGTAAGA
GACACCTCTAGGAAGAAGGAGAGGTCAAGACAGCATACTATGCTCTGTTCTAGTAGAAGAGAAG
GTAGGAGGGTGGGGCGCCTTCTGTCCAGTTCTTTCTGATATGTCACCGTAGGAGCTTTCTGCTC
AGGTGAGAGAGGCATGGGGTAAACCTCATCCTGGAAGCACGGCCCACACAAGACAGCGCAGGGT
CTAGCTTTAGGACAGAGCCTGCAGTCGTGGGGAAGCACCCTAGTGAAAAGTAGGCCATCTCAGA
GTCTTCAACCCTGGTCCCTATAGTCACAGAGCTGGTCAGCTGTGAGCAACTCTAAATCCAGGAT
TCTTCATGTGTGAGGAGGGTAGGAGACCCGCCACCGTTCAAGATCCAGGCAAATACGAAATGAT
CTAAAGCAGCTAAAGCCACAAGCACAGGGCCTGGGCACAGAGTCTGTGTTCACAAGCAGGGAGC
CTAGAGGCAGCTCTTGAAATACTCTGGATTTTGGAGATGGGCAGCTTTCATCCCCATTCTGCAG
ATGAGGAAACCGAGGCTCAGAGAGAGGCAGAGACTTACTCAGGGAGACCTAACCTACCTGGGTT
GGAGTAGAATTGGCCAGCTATGTTTCTCTGAGTCTACACTGCCCCCCTGTTTTGGTTGCTATAA
TAGGCACTTCTTGGTTCTGTGGGGAGGACGCTCAGGTCCTCTGTCTAGCGCAGATTCCTCAGAG
TTTGGTACACCGGGTGCCAAGTCAAGACAAATGTTTCATGCACAGCTGGACAATTCTAGAAAGA
CCAAAGGAACCACTCCCTGACCCTGAGGGCAGCTGCATTCTCAGTCAGCCGTCCTGCTTGCAAG
CCTTCAGTTCAATTGCAGCTATGCACTGGGACAGAGCAGTTGAGAGATGGGGGTGTGACAGAGG
AGCCTTGATGATTGGCTGGTTCTTGCTAAGGAGCGGCAGCCCCATCCGGGAGCAGTGTGTGGGG
CTCAGGGTGGAATCCATTGACGATCCCAGGGTCAGGGGTGCTGCCGAGAAGGATGGCCACCCCT
TCCTCTAGAGACATATTTTAGAGATCCGCTGGGGACCTGGGGATGGGCAGCAAGGGACTCAGGG
ATGGCAATTTTAGTTGAGAGTACAAGTCATGCTCCAACTAGCGCACACTTTCCGCTAAAGGATT
GGCCAGTGGAGGACTCTCTTCCTCGCCACATCCTTGGGGGCGGGGGAAGTGGTTTGGGAAAATC
ACAGACTTTTCTATTTGATGGAAGCTAGGGAGCCAAGCCTCTCTTCTGAGTAGCAGTGGCTGGC
TGAACGAGGGAGCGGGGTGTGTGTTGTGTTTGGAAAGGGCACTCGGAGGAGGAGGAGGAAGAGG
AGGAGAAGTAGGAGGAGGAAGAGGAGGAGGGACGGGTGATGCAAGGATTTTGAAAAAAAAAAAA
AAGAAGAAGAGGAAGAAAAAACGCTACCTCCCTGTGGGAGGTGGAACCTGGTCATTTGGTTCTG
CTTTTCCCAGCAGGTACCGCTCCCCTGGGGAACTTGGATGTTTGAGACAGAGGCAGATGAGAAG
GAGATGCCCCTGGTCGAGGGGAAGGGGCCAGGTGCTGAGGAACGCACACCCAGCAAAGACCCCT
CTCCCAGCCAGGAGCTGCCTCCAGGACAAGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCA
GGAGCTGCCTCCAGGACAAGACCTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCT
CCAGGACAAGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTTCCTGCAGGACAAG
ACCTCCCACCCAGGAAGGAATCCTTTTCAGGCCAAGAAGCAGCTCCTGGCCCAGAGTCACCATC
CAGTGAAGACATAGCAACCTGCCAAAACCCCCCTCAAAGCCCAGAAACCTCAACAAGCAAGGAC
TCCCCACCAGGCCAGGGATCCTCTCCAACCACAGAAGTCCCATCTTGCCAGGGACTTCCTGCTG
GTCAAGAATCTACAAGCCAGGACCCTCTGCTCAGTCAAGAGCCCCCTGCTATCCCAGAATCCTC
TGCCTCCGATCAGAATGTTCTACCCTCTCAGGAGTCACCTCCCAGCCAGGGCTCCCTATCAGAG
AAGGCCCTTGCTGAGCAGACTATCAGCCCCGGGGAGCTACCAGCGGCCACTGCAGGTGAACCTT
CAGCCTCCAGACCTAATTTTGTGATCCCCGAGGTCCGCCTGGATAGTGCCTACAGCCAGCAGGA
CGGAGCCCATGGAGGCAGCTCTGGTGAGGATGAGGATGCAGAAGAGGGAGAGGAGGGGGAAGAA
GGGGAGGAAGATGAGGAGGACGACACCAGCGACGACAACTATGGGGATCGTAATGAGGCCAAGC
GCAGCAGCCTGATTGAGACTGGCCAGGGCGCCGAGGGTGGCCTCTCGTTGCGTGTGCAGAACTC
GCTGCGGCGCCGGACGCACAGCGAGGGCAGCCTGCTGCAGGAGGCCCGTGGGCCCTGCTTTGCC
TCTGACACCACCCTACACTGCTCTGATGGTGAGGGCACCACATCCACCTGGGCCATCCCTTCTC
CCCGCACCCTCAAAAAAGAACTGGGTCGTAATGGAGGCTCCATGCACCACCTTTCCCTGTTCTT
CACTGGGCACAGGAAGATGAGTGGGACTGACCTCGCAGATGACGTTGAAGCCTCCCGGAAGAGA
AAGAGCAAAAACATAGCCAAGGATATGAAGAATAAGCTGGCCATCTTCAGGCGGCGGAATGAAT
CTCCTGGGGCCCAGCCAGCCGGCAAGGCAGACAAGACAACCAAGTCCTTCAAGCCTACCTCCGA
GGAAGCCCTCAAGTGGAGCGAGTCCCTGGAAAAGCTGCTGCTTCATAAATATGGCTTAGAAGTG
TTCCAGGCCTTTCTTCGCACAGAGTTCAGTGAGGAGAACCTGGAGTTTTGGCTGGCTTGTGAGG
ATTTCAAGAAGGTCAAATCGCAGTCCAAGATGGCAGCCAAAGCCAAGAAGATCTTTGCTGAGTT
CATCGCGATCCAGGCTTGCAAGGAGGTAAACCTGGACTCGTACACACGAGAACACACTAAGGAG
AACCTGCAGAGCATCACCCGAGGCTGCTTTGACCTGGCACAAAAACGTATCTTCGGGCTCATGG
AAAAGGACTCTTACCCTCGCTTCCTCCGCTCTGACCTCTACCTGGACCTCATTAACCAGAAGAA
GATGAGTCCCCCACTCTAGGGACCACCAGTATCCAGCTCAGCGTTCACACCAAGCGGAGCGGGC
TCCCTGCCCACCCGCCTCCCTTCCCTGTGACGGAGGGGACAAGTAAGCCCCCAGAGGCTGTGTC
TCCGGACAGACAGATGGACATTTGAATTCGAGGCCTGGGCCGAGAGAGACCCAGGCCACTACAG
GAAGTAGGAGGACCAGCTGCATCGGGTCCTTAACGTCCTGGTACGAGGGGACCAAGGGCCCTGG
CAGGTCAGGGCCCTGGAGGAGCCAGATCGGGAGCTGTGGCTCCCTGCTTTGGAGATAATGGAGT
CTTTACGCTGACCAAGTTCCTTTGAGAACTGGCTGGGGTTGGGACAGGAGGCCCAGGCCTGGGC
TCAGGGTCCAACCTGGGGGGCTGTTGGGCCTCACAGCTCAGACCTTTCCCCATTGAGTTTTATT
TATTTAAACAGTAGTTGGATGCTTGGCACATGAACGGTAATAGGAGAGCCCTCACCCTGTCAGT
TTTCTTAACTTACAAGTGCAATGTCTTACCCAAGGCCTTGTGAAGGCCACCTGGAGGTGTGATC
ACCGTCTTACAGTTTCAGGGCATTTGCTGGTCCCAGGAACCAGTGGCGGCAGCTGGGCCTTCTA
GACTGACATGACCTTGGAGGGGATGCTGCAGAAATCTGGCACCCACCCTGGGTGCCCAAGAGAT
CTGGGAAAGCATAGTGCCCTCCGGCCACACAGAAACAAGTGCTGGGGGCAAATAAAAGGCCTGT
GTTATTCTCAT

hide sequence

RefSeq Acc Id:

XM_017593595 ⟹ XP_017449084

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,037,730 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,022,167 - 76,161,895 (+)	NCBI
Rnor_6.0	5	78,429,042 - 78,567,281 (+)	NCBI

Sequence:

show sequence

AGGGTCCTTGGGAAGCAGAACTCCAGTAAAACCAGCCTCCCGGAAGAATGGGCCCCGTGCAGAC
CATGGCCTTCTCCCTTTGTGATCTGCTGCTACCCGTGGCACTGCACTTGAACGTCTTACACTGA
TGTAGAAGAAGGCTCTGCTCTACCTCAGCCTTATGGTCCAGCTCGCGGGGTCCAGCGGAGCCAC
AGATGTCTTCAGCACTTTGGAACTCTGTCCCTTGCTTACATCCACTGTTTGAAGCTAGAGCCGT
CCATTTTCTCTAGCTGGATGGAGTGGCCACATCAGGATACTTCCTTGTCCAGAAAAGATGCCTG
CACCCAGACTTACCCACCTAGGAGGAGAATCAGGCATGCCCAATTGCAGGATGCAGGTCAGCTG
AAGCTGTCCATTGGTGCCCAGGATCGGGTTCTGCTGCTACACGTTATAGAAGGCAAAGGCCTGA
TAAGCAAGAAGCCTGGCATCTGTGATCCCTATGTGAAGATTTCTTTGATCCCTGAAGACAGCCA
GCTCTGCTGCCAGACAACGCAGGTCATTCGGGACTGCAGAGACCCAGCTTTCCACGAGCACTTC
TTCTTTCCTGTCCCAGAGGAGGGTGATCAGAAGCGTCTTCTAGTGACAGTGTGGAACCAGGCCA
GTGAGACCAGGCAGCATGCGCTCATTGGCTGCATGAGCTTTGGGGTGAGGTCTCTCTTGACTCC
GGACAAGGAGATCAGTGGCTGGTACTATCTGCTAGGGGAGGACCTGGGTCGGACCAAGCACCTC
AAGGTGGCTAGGCGGCGGCTCCAGCCACTGAGAGATGTGCTGTTGAGAATGCCAGGAGATGGGG
ACCCTGAGAATGGGGAGAAGCTCCAGATCACCATCCGGAGGGGAAAAGACGGCTTTGGCTTCAC
CATCTGCTGTGACTCTCCGGTCCGAGTCCAGGCTGTGGATTCTGGGGGCCCAGCAGAGAGGGCG
GGGCTGCAGCAGCTGGACACAGTACTACAGCTGAATGAGAGGCCCGTGGAACACTGGAAATGTG
TGGAGCTGGCACACGAGATCCGGAGCTGTCCCAGCGAGATCATCCTGCTCGTGTGGCGTGTGGT
CCCCCAGATCAAGCCAGGGCCAGATGGCGGAGTCTTGAGGCGGGCCTCCTGCAAGTCCACACAT
GATCTCCTGTCACCCCCTAACAAGAGGGAGAAGAACTGTACTCACGGGGCTCCAACACGTCCCG
AGCAGCGCCACAGCTGCCACCTGGTGTGCGACAGCTCTGATGGGCTACTGCTCGGAGGCTGGGA
GCGCTACACTGAGGTGGGCAAGCGCAGCGGCCAGCATACCCTGCCTGCACTGTCCCGGGCCACC
ACCCCTACTGACCCCAACTACATCATCCTGGCCCCACTGAATCCTGGAAGCCAGTTGCTGCGGC
CTGTGTACCAGGAGGATGCCATCCCTGAAGAACCAGGGACTACTACTAAAGGGAAATCGTACAC
TGGCCTGGGCAAGAAGTCTCGGTTGATGAAGACAGTGCAGACCATGAAGGGCCACAGCAACTAC
CAAGATTGCTCAGCCCTGAGACCACACATCCCACATTCAAGTTACGGCACCTATGTCACCCTGG
CCCCCAAAGTCCTGGTATTCCCTGTCTTTGTGCAGCCCCTAGATCTCTGTAACCCTGCCCGGAC
TCTCCTGCTGTCAGAGGAGCTGCTGCTCTATGAGGGGAGGAACAAGACTTCCCAGGTGACACTG
TTTGCCTACTCGGACCTGCTGCTGTTCACTAAGGAGGAGGAACCAGGCCGCTGCGACGTCCTGA
GAAACCCCCTCTACCTCCAGAGTGTGAAGCTACAGGAGGGTTCTTCAGAAGACTTGAAATTCTG
TGTGCTGTACCTGGCAGAGAAGGCAGAGTGCTTATTCACTTTGGAGGCTCACTCGCAGGAGCAG
AAGAAGAGAGTGTGCTGGTGCCTGTCGGAGAACATCGCCAAGCAGCAACAGCTGGCTGCAACAC
CTACGGAGAGGAAGATGTTTGAGACAGAGGCAGATGAGAAGGAGATGCCCCTGGTCGAGGGGAA
GGGGCCAGGTGCTGAGGAACGCACACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCA
GGACAAGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACAAGACC
TCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACAAGAACTCCCACCCAG
CAAAGACCCCTCTCCCAGCCAGGAGCTTCCTGCAGGACAAGACCTCCCACCCAGGAAGGAATCC
TTTTCAGGCCAAGAAGCAGCTCCTGGCCCAGAGTCACCATCCAGTGAAGACATAGCAACCTGCC
AAAACCCCCCTCAAAGCCCAGAAACCTCAACAAGCAAGGACTCCCCACCAGGCCAGGGATCCTC
TCCAACCACAGAAGTCCCATCTTGCCAGGGACTTCCTGCTGGTCAAGAATCTACAAGCCAGGAC
CCTCTGCTCAGTCAAGAGCCCCCTGCTATCCCAGAATCCTCTGCCTCCGATCAGAATGTTCTAC
CCTCTCAGGAGTCACCTCCCAGCCAGGGCTCCCTATCAGAGAAGGCCCTTGCTGAGCAGACTAT
CAGCCCCGGGGAGCTACCAGCGGCCACTGCAGGTGAACCTTCAGCCTCCAGACCTAATTTTGTG
ATCCCCGAGGTCCGCCTGGATAGTGCCTACAGCCAGCAGGACGGAGCCCATGGAGGCAGCTCTG
GTGAGGATGAGGATGCAGAAGAGGGAGAGGAGGGGGAAGAAGGGGAGGAAGATGAGGAGGACGA
CACCAGCGACGACAACTATGGGGATCGTAATGAGGCCAAGCGCAGCAGCCTGATTGAGACTGGC
CAGGGCGCCGAGGGTGGCCTCTCGTTGCGTGTGCAGAACTCGCTGCGGCGCCGGACGCACAGCG
AGGGCAGCCTGCTGCAGGAGGCCCGTGGGCCCTGCTTTGCCTCTGACACCACCCTACACTGCTC
TGATGGTGAGGGCACCACATCCACCTGGGCCATCCCTTCTCCCCGCACCCTCAAAAAAGAACTG
GGTCGTAATGGAGGCTCCATGCACCACCTTTCCCTGTTCTTCACTGGGCACAGGAAGATGAGTG
GGACTGACCTCGCAGATGACGTTGAAGCCTCCCGGAAGAGAAAGAGCAAAAACATAGCCAAGGA
TATGAAGAATAAGCTGGCCATCTTCAGGCGGCGGAATGAATCTCCTGGGGCCCAGCCAGCCGGC
AAGGCAGACAAGACAACCAAGTCCTTCAAGCCTACCTCCGAGGAAGCCCTCAAGTGGAGCGAGT
CCCTGGAAAAGCTGCTGCTTCATAAATATGGCTTAGAAGTGTTCCAGGCCTTTCTTCGCACAGA
GTTCAGTGAGGAGAACCTGGAGTTTTGGCTGGCTTGTGAGGATTTCAAGAAGGTCAAATCGCAG
TCCAAGATGGCAGCCAAAGCCAAGAAGATCTTTGCTGAGTTCATCGCGATCCAGGCTTGCAAGG
AGGTAAACCTGGACTCGTACACACGAGAACACACTAAGGAGAACCTGCAGAGCATCACCCGAGG
CTGCTTTGACCTGGCACAAAAACGTATCTTCGGGCTCATGGAAAAGGACTCTTACCCTCGCTTC
CTCCGCTCTGACCTCTACCTGGACCTCATTAACCAGAAGAAGATGAGTCCCCCACTCTAGGGAC
CACCAGTATCCAGCTCAGCGTTCACACCAAGCGGAGCGGGCTCCCTGCCCACCCGCCTCCCTTC
CCTGTGACGGAGGGGACAAGTAAGCCCCCAGAGGCTGTGTCTCCGGACAGACAGATGGACATTT
GAATTCGAGGCCTGGGCCGAGAGAGACCCAGGCCACTACAGGAAGTAGGAGGACCAGCTGCATC
GGGTCCTTAACGTCCTGGTACGAGGGGACCAAGGGCCCTGGCAGGTCAGGGCCCTGGAGGAGCC
AGATCGGGAGCTGTGGCTCCCTGCTTTGGAGATAATGGAGTCTTTACGCTGACCAAGTTCCTTT
GAGAACTGGCTGGGGTTGGGACAGGAGGCCCAGGCCTGGGCTCAGGGTCCAACCTGGGGGGCTG
TTGGGCCTCACAGCTCAGACCTTTCCCCATTGAGTTTTATTTATTTAAACAGTAGTTGGATGCT
TGGCACATGAACGGTAATAGGAGAGCCCTCACCCTGTCAGTTTTCTTAACTTACAAGTGCAATG
TCTTACCCAAGGCCTTGTGAAGGCCACCTGGAGGTGTGATCACCGTCTTACAGTTTCAGGGCAT
TTGCTGGTCCCAGGAACCAGTGGCGGCAGCTGGGCCTTCTAGACTGACATGACCTTGGAGGGGA
TGCTGCAGAAATCTGGCACCCACCCTGGGTGCCCAAGAGATCTGGGAAAGCATAGTGCCCTCCG
GCCACACAGAAACAAGTGCTGGGGGCAAATAAAAGGCCTGTGTTATTCTCAT

hide sequence

RefSeq Acc Id:

XM_017593597 ⟹ XP_017449086

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,057,702 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,042,138 - 76,161,895 (+)	NCBI
Rnor_6.0	5	78,447,541 - 78,567,281 (+)	NCBI

Sequence:

show sequence

CGCCCGCCCCGGAGTCGCTGGCGAGGTGTGGAACGGCTGAGCCTGCTTCCTGGGTTACCTGCAC
CCACATAACCACCACCTGGGGACAGGTCCTCCTGACCTGGCCGCAACGGGGACGCCATGGAGCG
CTCCCTGCACCGAGTCTCCCTCGGGAGCCGGCGCGCCCACCCGAACTTGTCCTTCTATCTCACC
ACCTTTGGTCAGCTGAAGCTGTCCATTGGTGCCCAGGATCGGGTTCTGCTGCTACACGAAGGCA
AAGGCCTGATAAGCAAGAAGCCTGGCATCTGTGATCCCTATGTGAAGATTTCTTTGATCCCTGA
AGACAGCCAGCTCTGCTGCCAGACAACGCAGGTCATTCGGGACTGCAGAGACCCAGCTTTCCAC
GAGCACTTCTTCTTTCCTGTCCCAGAGGAGGGTGATCAGAAGCGTCTTCTAGTGACAGTGTGGA
ACCAGGCCAGTGAGACCAGGCAGCATGCGCTCATTGGCTGCATGAGCTTTGGGGTGAGGTCTCT
CTTGACTCCGGACAAGGAGATCAGTGGCTGGTACTATCTGCTAGGGGAGGACCTGGGTCGGACC
AAGCACCTCAAGGTGGCTAGGCGGCGGCTCCAGCCACTGAGAGATGTGCTGTTGAGAATGCCAG
GAGATGGGGACCCTGAGAATGGGGAGAAGCTCCAGATCACCATCCGGAGGGGAAAAGACGGCTT
TGGCTTCACCATCTGCTGTGACTCTCCGGTCCGAGTCCAGGCTGTGGATTCTGGGGGCCCAGCA
GAGAGGGCGGGGCTGCAGCAGCTGGACACAGTACTACAGCTGAATGAGAGGCCCGTGGAACACT
GGAAATGTGTGGAGCTGGCACACGAGATCCGGAGCTGTCCCAGCGAGATCATCCTGCTCGTGTG
GCGTGTGGTCCCCCAGATCAAGCCAGGGCCAGATGGCGGAGTCTTGAGGCGGGCCTCCTGCAAG
TCCACACATGATCTCCTGTCACCCCCTAACAAGAGGGAGAAGAACTGTACTCACGGGGCTCCAA
CACGTCCCGAGCAGCGCCACAGCTGCCACCTGGTGTGCGACAGCTCTGATGGGCTACTGCTCGG
AGGCTGGGAGCGCTACACTGAGGTGGGCAAGCGCAGCGGCCAGCATACCCTGCCTGCACTGTCC
CGGGCCACCACCCCTACTGACCCCAACTACATCATCCTGGCCCCACTGAATCCTGGAAGCCAGT
TGCTGCGGCCTGTGTACCAGGAGGATGCCATCCCTGAAGAACCAGGGACTACTACTAAAGGGAA
ATCGTACACTGGCCTGGGCAAGAAGTCTCGGTTGATGAAGACAGTGCAGACCATGAAGGGCCAC
AGCAACTACCAAGATTGCTCAGCCCTGAGACCACACATCCCACATTCAAGTTACGGCACCTATG
TCACCCTGGCCCCCAAAGTCCTGGTATTCCCTGTCTTTGTGCAGCCCCTAGATCTCTGTAACCC
TGCCCGGACTCTCCTGCTGTCAGAGGAGCTGCTGCTCTATGAGGGGAGGAACAAGACTTCCCAG
GTGACACTGTTTGCCTACTCGGACCTGCTGCTGTTCACTAAGGAGGAGGAACCAGGCCGCTGCG
ACGTCCTGAGAAACCCCCTCTACCTCCAGAGTGTGAAGCTACAGGAGGGTTCTTCAGAAGACTT
GAAATTCTGTGTGCTGTACCTGGCAGAGAAGGCAGAGTGCTTATTCACTTTGGAGGCTCACTCG
CAGGAGCAGAAGAAGAGAGTGTGCTGGTGCCTGTCGGAGAACATCGCCAAGCAGCAACAGCTGG
CTGCAACACCTACGGAGAGGAAGATGTTTGAGACAGAGGCAGATGAGAAGGAGATGCCCCTGGT
CGAGGGGAAGGGGCCAGGTGCTGAGGAACGCACACCCAGCAAAGACCCCTCTCCCAGCCAGGAG
CTGCCTCCAGGACAAGAACTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAG
GACAAGACCTCCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTGCCTCCAGGACAAGAACT
CCCACCCAGCAAAGACCCCTCTCCCAGCCAGGAGCTTCCTGCAGGACAAGACCTCCCACCCAGG
AAGGAATCCTTTTCAGGCCAAGAAGCAGCTCCTGGCCCAGAGTCACCATCCAGTGAAGACATAG
CAACCTGCCAAAACCCCCCTCAAAGCCCAGAAACCTCAACAAGCAAGGACTCCCCACCAGGCCA
GGGATCCTCTCCAACCACAGAAGTCCCATCTTGCCAGGGACTTCCTGCTGGTCAAGAATCTACA
AGCCAGGACCCTCTGCTCAGTCAAGAGCCCCCTGCTATCCCAGAATCCTCTGCCTCCGATCAGA
ATGTTCTACCCTCTCAGGAGTCACCTCCCAGCCAGGGCTCCCTATCAGAGAAGGCCCTTGCTGA
GCAGACTATCAGCCCCGGGGAGCTACCAGCGGCCACTGCAGGTGAACCTTCAGCCTCCAGACCT
AATTTTGTGATCCCCGAGGTCCGCCTGGATAGTGCCTACAGCCAGCAGGACGGAGCCCATGGAG
GCAGCTCTGGTGAGGATGAGGATGCAGAAGAGGGAGAGGAGGGGGAAGAAGGGGAGGAAGATGA
GGAGGACGACACCAGCGACGACAACTATGGGGATCGTAATGAGGCCAAGCGCAGCAGCCTGATT
GAGACTGGCCAGGGCGCCGAGGGTGGCCTCTCGTTGCGTGTGCAGAACTCGCTGCGGCGCCGGA
CGCACAGCGAGGGCAGCCTGCTGCAGGAGGCCCGTGGGCCCTGCTTTGCCTCTGACACCACCCT
ACACTGCTCTGATGGTGAGGGCACCACATCCACCTGGGCCATCCCTTCTCCCCGCACCCTCAAA
AAAGAACTGGGTCGTAATGGAGGCTCCATGCACCACCTTTCCCTGTTCTTCACTGGGCACAGGA
AGATGAGTGGGACTGACCTCGCAGATGACGTTGAAGCCTCCCGGAAGAGAAAGAGCAAAAACAT
AGCCAAGGATATGAAGAATAAGCTGGCCATCTTCAGGCGGCGGAATGAATCTCCTGGGGCCCAG
CCAGCCGGCAAGGCAGACAAGACAACCAAGTCCTTCAAGCCTACCTCCGAGGAAGCCCTCAAGT
GGAGCGAGTCCCTGGAAAAGCTGCTGCTTCATAAATATGGCTTAGAAGTGTTCCAGGCCTTTCT
TCGCACAGAGTTCAGTGAGGAGAACCTGGAGTTTTGGCTGGCTTGTGAGGATTTCAAGAAGGTC
AAATCGCAGTCCAAGATGGCAGCCAAAGCCAAGAAGATCTTTGCTGAGTTCATCGCGATCCAGG
CTTGCAAGGAGGTAAACCTGGACTCGTACACACGAGAACACACTAAGGAGAACCTGCAGAGCAT
CACCCGAGGCTGCTTTGACCTGGCACAAAAACGTATCTTCGGGCTCATGGAAAAGGACTCTTAC
CCTCGCTTCCTCCGCTCTGACCTCTACCTGGACCTCATTAACCAGAAGAAGATGAGTCCCCCAC
TCTAGGGACCACCAGTATCCAGCTCAGCGTTCACACCAAGCGGAGCGGGCTCCCTGCCCACCCG
CCTCCCTTCCCTGTGACGGAGGGGACAAGTAAGCCCCCAGAGGCTGTGTCTCCGGACAGACAGA
TGGACATTTGAATTCGAGGCCTGGGCCGAGAGAGACCCAGGCCACTACAGGAAGTAGGAGGACC
AGCTGCATCGGGTCCTTAACGTCCTGGTACGAGGGGACCAAGGGCCCTGGCAGGTCAGGGCCCT
GGAGGAGCCAGATCGGGAGCTGTGGCTCCCTGCTTTGGAGATAATGGAGTCTTTACGCTGACCA
AGTTCCTTTGAGAACTGGCTGGGGTTGGGACAGGAGGCCCAGGCCTGGGCTCAGGGTCCAACCT
GGGGGGCTGTTGGGCCTCACAGCTCAGACCTTTCCCCATTGAGTTTTATTTATTTAAACAGTAG
TTGGATGCTTGGCACATGAACGGTAATAGGAGAGCCCTCACCCTGTCAGTTTTCTTAACTTACA
AGTGCAATGTCTTACCCAAGGCCTTGTGAAGGCCACCTGGAGGTGTGATCACCGTCTTACAGTT
TCAGGGCATTTGCTGGTCCCAGGAACCAGTGGCGGCAGCTGGGCCTTCTAGACTGACATGACCT
TGGAGGGGATGCTGCAGAAATCTGGCACCCACCCTGGGTGCCCAAGAGATCTGGGAAAGCATAG
TGCCCTCCGGCCACACAGAAACAAGTGCTGGGGGCAAATAAAAGGCCTGTGTTATTCTCAT

hide sequence

RefSeq Acc Id:

XM_039110674 ⟹ XP_038966602

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,037,602 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,022,038 - 76,161,895 (+)	NCBI

RefSeq Acc Id:

XM_039110676 ⟹ XP_038966604

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,082,314 - 81,177,446 (+)	NCBI
mRatBN7.2	5	76,066,756 - 76,161,895 (+)	NCBI

RefSeq Acc Id:

XM_063288322 ⟹ XP_063144392

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,037,602 - 81,177,446 (+)	NCBI

RefSeq Acc Id:

XM_063288323 ⟹ XP_063144393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,037,588 - 81,139,312 (+)	NCBI

RefSeq Acc Id:

XM_063288324 ⟹ XP_063144394

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,037,588 - 81,130,942 (+)	NCBI

RefSeq Acc Id:

XM_063288325 ⟹ XP_063144395

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,142,580 - 81,177,446 (+)	NCBI

RefSeq Acc Id:

XM_063288326 ⟹ XP_063144396

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,149,040 - 81,177,446 (+)	NCBI

RefSeq Acc Id:

XM_063288327 ⟹ XP_063144397

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,171,872 - 81,177,446 (+)	NCBI

RefSeq Acc Id:

XM_063288328 ⟹ XP_063144398

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	81,171,872 - 81,177,446 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001416610	(Get FASTA)	NCBI Sequence Viewer
	NP_062213	(Get FASTA)	NCBI Sequence Viewer
	XP_006238322	(Get FASTA)	NCBI Sequence Viewer
	XP_006238326	(Get FASTA)	NCBI Sequence Viewer
	XP_006238327	(Get FASTA)	NCBI Sequence Viewer
	XP_008762023	(Get FASTA)	NCBI Sequence Viewer
	XP_008762024	(Get FASTA)	NCBI Sequence Viewer
	XP_017449084	(Get FASTA)	NCBI Sequence Viewer
	XP_017449086	(Get FASTA)	NCBI Sequence Viewer
	XP_038966602	(Get FASTA)	NCBI Sequence Viewer
	XP_038966604	(Get FASTA)	NCBI Sequence Viewer
	XP_063144392	(Get FASTA)	NCBI Sequence Viewer
	XP_063144393	(Get FASTA)	NCBI Sequence Viewer
	XP_063144394	(Get FASTA)	NCBI Sequence Viewer
	XP_063144395	(Get FASTA)	NCBI Sequence Viewer
	XP_063144396	(Get FASTA)	NCBI Sequence Viewer
	XP_063144397	(Get FASTA)	NCBI Sequence Viewer
	XP_063144398	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC52371	(Get FASTA)	NCBI Sequence Viewer
	AAH85710	(Get FASTA)	NCBI Sequence Viewer
	BAB63460	(Get FASTA)	NCBI Sequence Viewer
	EDM10542	(Get FASTA)	NCBI Sequence Viewer
	EDM10543	(Get FASTA)	NCBI Sequence Viewer
	EDM10544	(Get FASTA)	NCBI Sequence Viewer
	EDM10545	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000055954.4
	ENSRNOP00000055956
	ENSRNOP00000055956.4
	ENSRNOP00000071774
	ENSRNOP00000071774.1
	ENSRNOP00000081496
	ENSRNOP00000081496.1
	ENSRNOP00000093735.1
GenBank Protein	P49797	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_062213 ⟸ NM_019340

- Sequence:

show sequence

MNRFNGLCKVCSERRYRQITIRRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLN
ERPVEHWKCVELAHEIRSCPSEIILLVWRVVPQIKPGPDGGVLRRASCKSTHDLLSPPNKREKN
CTHGAPTRPEQRHSCHLVCDSSDGLLLGGWERYTEVGKRSGQHTLPALSRATTPTDPNYIILAP
LNPGSQLLRPVYQEDAIPEEPGTTTKGKSYTGLGKKSRLMKTVQTMKGHSNYQDCSALRPHIPH
SSYGTYVTLAPKVLVFPVFVQPLDLCNPARTLLLSEELLLYEGRNKTSQVTLFAYSDLLLFTKE
EEPGRCDVLRNPLYLQSVKLQEGSSEDLKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENI
AKQQQLAATPTERKMFETEADEKEMPLVEGKGPGAEERTPSKDPSPSQELPPGQELPPSKDPSP
SQELPPGQELPPSKDPSPSQELPPGQELPSSKNPSPSQELPAGQDLPPRKESFSGQEAAPGPES
PSSEDIATCQNPPQSPETSTSKDSPPGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQEPPAIPE
SSASDQNVLPSQESPPSQGSLSEKALAEQTISPGELPAATAGEPSASRPNFVIPEVRLDSAYSQ
QDGAHGGSSGEDEDAEEGEEGEEGEEDEEDDTNDDNYGDRNEAKRSSLIETGQGAEGGLSLRVQ
NSLRRRTHSEGSLLQEARGPCFASDTTLHCSDGEGTTSTWAIPSPRTLKKELGRNGGSMHHLSL
FFTGHRKMSGTDLADDVEASRKRKSKNIAKDMKNKLAIFRRRNESPGAQPAGKADKTTKSFKPT
SEEALKWSESLEKLLLHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFA
EFIAIQACKEVNLDSYTREHTKENLQSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQ
KKMSPPL

hide sequence

RefSeq Acc Id:

XP_006238326 ⟸ XM_006238264

- Peptide Label:

isoform X7

- Sequence:

show sequence

MERSLHRVSLGSRRAHPNLSFYLTTFGQLKLSIGAQDRVLLLHVIEGKGLISKKPGICDPYVKI
SLIPEDSQLCCQTTQVIRDCRDPAFHEHFFFPVPEEGDQKRLLVTVWNQASETRQHALIGCMSF
GVRSLLTPDKEISGWYYLLGEDLGRTKHLKVARRRLQPLRDVLLRMPGDGDPENGEKLQITIRR
GKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEI
ILLVWRVVPQIKPGPDGGVLRRASCKSTHDLLSPPNKREKNCTHGAPTRPEQRHSCHLVCDSSD
GLLLGGWERYTEVGKRSGQHTLPALSRATTPTDPNYIILAPLNPGSQLLRPVYQEDAIPEEPGT
TTKGKSYTGLGKKSRLMKTVQTMKGHSNYQDCSALRPHIPHSSYGTYVTLAPKVLVFPVFVQPL
DLCNPARTLLLSEELLLYEGRNKTSQVTLFAYSDLLLFTKEEEPGRCDVLRNPLYLQSVKLQEG
SSEDLKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAATPTERKKLHPYGSLQ
QEMGPVTSINATQDRSFTSSGQTLIG

hide sequence

RefSeq Acc Id:	XP_006238322 ⟸ XM_006238260
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZT37 (UniProtKB/TrEMBL), A6J7W3 (UniProtKB/TrEMBL), G3V9Q2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERSLHRVSLGSRRAHPNLSFYLTTFGQLKLSIGAQDRVLLLHVIEGKGLISKKPGICDPYVKI SLIPEDSQLCCQTTQVIRDCRDPAFHEHFFFPVPEEGDQKRLLVTVWNQASETRQHALIGCMSF GVRSLLTPDKEISGWYYLLGEDLGRTKHLKVARRRLQPLRDVLLRMPGDGDPENGEKLQITIRR GKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEI ILLVWRVVPQIKPGPDGGVLRRASCKSTHDLLSPPNKREKNCTHGAPTRPEQRHSCHLVCDSSD GLLLGGWERYTEVGKRSGQHTLPALSRATTPTDPNYIILAPLNPGSQLLRPVYQEDAIPEEPGT TTKGKSYTGLGKKSRLMKTVQTMKGHSNYQDCSALRPHIPHSSYGTYVTLAPKVLVFPVFVQPL DLCNPARTLLLSEELLLYEGRNKTSQVTLFAYSDLLLFTKEEEPGRCDVLRNPLYLQSVKLQEG SSEDLKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAATPTERKMFETEADEK EMPLVEGKGPGAEERTPSKDPSPSQELPPGQELPPSKDPSPSQELPPGQDLPPSKDPSPSQELP PGQELPPSKDPSPSQELPAGQDLPPRKESFSGQEAAPGPESPSSEDIATCQNPPQSPETSTSKD SPPGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQEPPAIPESSASDQNVLPSQESPPSQGSLSE KALAEQTISPGELPAATAGEPSASRPNFVIPEVRLDSAYSQQDGAHGGSSGEDEDAEEGEEGEE GEEDEEDDTSDDNYGDRNEAKRSSLIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQEARGPCFA SDTTLHCSDGEGTTSTWAIPSPRTLKKELGRNGGSMHHLSLFFTGHRKMSGTDLADDVEASRKR KSKNIAKDMKNKLAIFRRRNESPGAQPAGKADKTTKSFKPTSEEALKWSESLEKLLLHKYGLEV FQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEFIAIQACKEVNLDSYTREHTKE NLQSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL hide sequence

RefSeq Acc Id:	XP_006238327 ⟸ XM_006238265
- Peptide Label:	isoform X10
- UniProtKB:	P49797 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MNRFNGLCKVCSERRYRQITIRRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLN ERPVEHWKCVELAHEIRSCPSEIILLVWRVVPQIKPGPDGGVLRRASCKSTHDLLSPPNKREKN CTHGAPTRPEQRHSCHLVCDSSDGLLLGGWERYTEVGKRSGQHTLPALSRATTPTDPNYIILAP LNPGSQLLRPVYQEDAIPEEPGTTTKGKSYTGLGKKSRLMKTVQTMKGHSNYQDCSALRPHIPH SSYGTYVTLAPKVLVFPVFVQPLDLCNPARTLLLSEELLLYEGRNKTSQVTLFAYSDLLLFTKE EEPGRCDVLRNPLYLQSVKLQEGSSEDLKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENI AKQQQLAATPTERKKLHPYGSLQQEMGPVTSINATQDRSFTSSGQTLIG hide sequence

RefSeq Acc Id:	XP_008762024 ⟸ XM_008763802
- Peptide Label:	isoform X9
- UniProtKB:	A6J7W4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFETEADEKEMPLVEGKGPGAEERTPSKDPSPSQELPPGQELPPSKDPSPSQELPPGQDLPPSK DPSPSQELPPGQELPPSKDPSPSQELPAGQDLPPRKESFSGQEAAPGPESPSSEDIATCQNPPQ SPETSTSKDSPPGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQEPPAIPESSASDQNVLPSQES PPSQGSLSEKALAEQTISPGELPAATAGEPSASRPNFVIPEVRLDSAYSQQDGAHGGSSGEDED AEEGEEGEEGEEDEEDDTSDDNYGDRNEAKRSSLIETGQGAEGGLSLRVQNSLRRRTHSEGSLL QEARGPCFASDTTLHCSDGEGTTSTWAIPSPRTLKKELGRNGGSMHHLSLFFTGHRKMSGTDLA DDVEASRKRKSKNIAKDMKNKLAIFRRRNESPGAQPAGKADKTTKSFKPTSEEALKWSESLEKL LLHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEFIAIQACKEVNLD SYTREHTKENLQSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL hide sequence

RefSeq Acc Id:	XP_008762023 ⟸ XM_008763801
- Peptide Label:	isoform X9
- UniProtKB:	A6J7W4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFETEADEKEMPLVEGKGPGAEERTPSKDPSPSQELPPGQELPPSKDPSPSQELPPGQDLPPSK DPSPSQELPPGQELPPSKDPSPSQELPAGQDLPPRKESFSGQEAAPGPESPSSEDIATCQNPPQ SPETSTSKDSPPGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQEPPAIPESSASDQNVLPSQES PPSQGSLSEKALAEQTISPGELPAATAGEPSASRPNFVIPEVRLDSAYSQQDGAHGGSSGEDED AEEGEEGEEGEEDEEDDTSDDNYGDRNEAKRSSLIETGQGAEGGLSLRVQNSLRRRTHSEGSLL QEARGPCFASDTTLHCSDGEGTTSTWAIPSPRTLKKELGRNGGSMHHLSLFFTGHRKMSGTDLA DDVEASRKRKSKNIAKDMKNKLAIFRRRNESPGAQPAGKADKTTKSFKPTSEEALKWSESLEKL LLHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEFIAIQACKEVNLD SYTREHTKENLQSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL hide sequence

RefSeq Acc Id:	XP_017449084 ⟸ XM_017593595
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K1B5 (UniProtKB/TrEMBL), A6J7W3 (UniProtKB/TrEMBL), G3V9Q2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEWPHQDTSLSRKDACTQTYPPRRRIRHAQLQDAGQLKLSIGAQDRVLLLHVIEGKGLISKKPG ICDPYVKISLIPEDSQLCCQTTQVIRDCRDPAFHEHFFFPVPEEGDQKRLLVTVWNQASETRQH ALIGCMSFGVRSLLTPDKEISGWYYLLGEDLGRTKHLKVARRRLQPLRDVLLRMPGDGDPENGE KLQITIRRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHE IRSCPSEIILLVWRVVPQIKPGPDGGVLRRASCKSTHDLLSPPNKREKNCTHGAPTRPEQRHSC HLVCDSSDGLLLGGWERYTEVGKRSGQHTLPALSRATTPTDPNYIILAPLNPGSQLLRPVYQED AIPEEPGTTTKGKSYTGLGKKSRLMKTVQTMKGHSNYQDCSALRPHIPHSSYGTYVTLAPKVLV FPVFVQPLDLCNPARTLLLSEELLLYEGRNKTSQVTLFAYSDLLLFTKEEEPGRCDVLRNPLYL QSVKLQEGSSEDLKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAATPTERKM FETEADEKEMPLVEGKGPGAEERTPSKDPSPSQELPPGQELPPSKDPSPSQELPPGQDLPPSKD PSPSQELPPGQELPPSKDPSPSQELPAGQDLPPRKESFSGQEAAPGPESPSSEDIATCQNPPQS PETSTSKDSPPGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQEPPAIPESSASDQNVLPSQESP PSQGSLSEKALAEQTISPGELPAATAGEPSASRPNFVIPEVRLDSAYSQQDGAHGGSSGEDEDA EEGEEGEEGEEDEEDDTSDDNYGDRNEAKRSSLIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQ EARGPCFASDTTLHCSDGEGTTSTWAIPSPRTLKKELGRNGGSMHHLSLFFTGHRKMSGTDLAD DVEASRKRKSKNIAKDMKNKLAIFRRRNESPGAQPAGKADKTTKSFKPTSEEALKWSESLEKLL LHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEFIAIQACKEVNLDS YTREHTKENLQSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL hide sequence

RefSeq Acc Id:	XP_017449086 ⟸ XM_017593597
- Peptide Label:	isoform X4
- UniProtKB:	A6J7W3 (UniProtKB/TrEMBL), G3V9Q2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERSLHRVSLGSRRAHPNLSFYLTTFGQLKLSIGAQDRVLLLHEGKGLISKKPGICDPYVKISL IPEDSQLCCQTTQVIRDCRDPAFHEHFFFPVPEEGDQKRLLVTVWNQASETRQHALIGCMSFGV RSLLTPDKEISGWYYLLGEDLGRTKHLKVARRRLQPLRDVLLRMPGDGDPENGEKLQITIRRGK DGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIIL LVWRVVPQIKPGPDGGVLRRASCKSTHDLLSPPNKREKNCTHGAPTRPEQRHSCHLVCDSSDGL LLGGWERYTEVGKRSGQHTLPALSRATTPTDPNYIILAPLNPGSQLLRPVYQEDAIPEEPGTTT KGKSYTGLGKKSRLMKTVQTMKGHSNYQDCSALRPHIPHSSYGTYVTLAPKVLVFPVFVQPLDL CNPARTLLLSEELLLYEGRNKTSQVTLFAYSDLLLFTKEEEPGRCDVLRNPLYLQSVKLQEGSS EDLKFCVLYLAEKAECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAATPTERKMFETEADEKEM PLVEGKGPGAEERTPSKDPSPSQELPPGQELPPSKDPSPSQELPPGQDLPPSKDPSPSQELPPG QELPPSKDPSPSQELPAGQDLPPRKESFSGQEAAPGPESPSSEDIATCQNPPQSPETSTSKDSP PGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQEPPAIPESSASDQNVLPSQESPPSQGSLSEKA LAEQTISPGELPAATAGEPSASRPNFVIPEVRLDSAYSQQDGAHGGSSGEDEDAEEGEEGEEGE EDEEDDTSDDNYGDRNEAKRSSLIETGQGAEGGLSLRVQNSLRRRTHSEGSLLQEARGPCFASD TTLHCSDGEGTTSTWAIPSPRTLKKELGRNGGSMHHLSLFFTGHRKMSGTDLADDVEASRKRKS KNIAKDMKNKLAIFRRRNESPGAQPAGKADKTTKSFKPTSEEALKWSESLEKLLLHKYGLEVFQ AFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEFIAIQACKEVNLDSYTREHTKENL QSITRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL hide sequence

RefSeq Acc Id:

ENSRNOP00000071774 ⟸ ENSRNOT00000080744

RefSeq Acc Id:

ENSRNOP00000055954 ⟸ ENSRNOT00000059181

RefSeq Acc Id:

ENSRNOP00000055956 ⟸ ENSRNOT00000059183

RefSeq Acc Id:	XP_038966602 ⟸ XM_039110674
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K1B5 (UniProtKB/TrEMBL), A6J7W3 (UniProtKB/TrEMBL), G3V9Q2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966604 ⟸ XM_039110676
- Peptide Label:	isoform X5
- UniProtKB:	A6J7W3 (UniProtKB/TrEMBL), G3V9Q2 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000093735 ⟸ ENSRNOT00000099793

RefSeq Acc Id:

ENSRNOP00000081496 ⟸ ENSRNOT00000107343

RefSeq Acc Id:	XP_063144393 ⟸ XM_063288323
- Peptide Label:	isoform X6
- UniProtKB:	A0A8L2QRC0 (UniProtKB/TrEMBL), A6J7W2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144394 ⟸ XM_063288324
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063144392 ⟸ XM_063288322
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063144395 ⟸ XM_063288325
- Peptide Label:	isoform X9
- UniProtKB:	A6J7W4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144396 ⟸ XM_063288326
- Peptide Label:	isoform X9
- UniProtKB:	A6J7W4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144397 ⟸ XM_063288327
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I6AJG0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144398 ⟸ XM_063288328
- Peptide Label:	isoform X12
- UniProtKB:	A6J7W5 (UniProtKB/TrEMBL)

Protein Domains

C2 PDZ RGS

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P49797-F1-model_v2	AlphaFold	P49797	1-967	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693797

Promoter ID:

EPDNEW_R4321

Type:

single initiation site

Name:

Rgs3_1

Description:

regulator of G-protein signaling 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	78,483,872 - 78,483,932	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:3566	AgrOrtholog
BioCyc Gene	G2FUF-41084	BioCyc
Ensembl Genes	ENSRNOG00000024501	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000059181.5	UniProtKB/TrEMBL
	ENSRNOT00000059183	ENTREZGENE
	ENSRNOT00000059183.4	UniProtKB/TrEMBL
	ENSRNOT00000080744	ENTREZGENE
	ENSRNOT00000080744.2	UniProtKB/TrEMBL
	ENSRNOT00000099793.1	UniProtKB/TrEMBL
	ENSRNOT00000107343.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.167.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	1.10.196.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.30.42.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.60.40.150	UniProtKB/TrEMBL
InterPro	C2_dom	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RGS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RGS_RGS3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RGS_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RGS_subdom1/3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RGS_subdomain_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:54293	UniProtKB/Swiss-Prot
NCBI Gene	54293	ENTREZGENE
PANTHER	REGULATOR OF G-PROTEIN SIGNALING 3	UniProtKB/Swiss-Prot
	REGULATOR OF G-PROTEIN SIGNALING 3	UniProtKB/Swiss-Prot
	REGULATOR OF G-PROTEIN SIGNALING 3	UniProtKB/TrEMBL
	REGULATOR OF G-PROTEIN SIGNALING 3	UniProtKB/TrEMBL
Pfam	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PF00168	UniProtKB/TrEMBL
	RGS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Rgs3	PhenoGen
PRINTS	RGSPROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PS50004	UniProtKB/TrEMBL
	RGS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000024501	RatGTEx
SMART	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RGS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF48097	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF49562	UniProtKB/TrEMBL
	SSF50156	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2K1B5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZT37	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AJG0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QRC0	ENTREZGENE, UniProtKB/TrEMBL
	A6J7W2	ENTREZGENE, UniProtKB/TrEMBL
	A6J7W3	ENTREZGENE, UniProtKB/TrEMBL
	A6J7W4	ENTREZGENE, UniProtKB/TrEMBL
	A6J7W5	ENTREZGENE, UniProtKB/TrEMBL
	G3V9Q2	ENTREZGENE, UniProtKB/TrEMBL
	P49797	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q5RKK6	UniProtKB/Swiss-Prot
	Q920Q9	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-15	Rgs3	regulator of G-protein signaling 3	Rgs3	regulator of G-protein signalling 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Rgs3	regulator of G-protein signalling 3		regulator of G-protein signaling 3	Name updated	1299863	APPROVED
2002-06-10	Rgs3	regulator of G-protein signaling 3			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_function	binds directly to the activated Ga subunits and pormotes GTP hydrolysis	625585
gene_process	serves as a GTPase-activating protein (GAP) and inhibits G protein signaling; inhibits muscarinic m3 receptor signaling through MAP kinase (ERK)	625585

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

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Imported Disease Annotations - CTD

Imported Annotations - PID (archival)