Rpe (ribulose-5-phosphate-3-epimerase)

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Gene: Rpe (ribulose-5-phosphate-3-epimerase) Rattus norvegicus

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Symbol:

Rpe

Name:

ribulose-5-phosphate-3-epimerase

RGD ID:

1564890

Description:

Enables D-ribulose-phosphate 3-epimerase activity and monosaccharide binding activity. Involved in pentose-phosphate shunt, non-oxidative branch. Predicted to be active in cytosol. Orthologous to several human genes including RPE (ribulose-5-phosphate-3-epimerase); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A; buspirone.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MGC124653; ribulose-phosphate 3-epimerase; similar to Ribulose-5-phosphate-3-epimerase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RPE (ribulose-5-phosphate-3-epimerase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Rpe (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rpe (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RPE (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RPE (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rpe (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RPE (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RPE (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rpe (ribulose-5-phosphate-3-epimerase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RPEL1 (ribulose-5-phosphate-3-epimerase like 1)	HGNC	EggNOG, Ensembl, OrthoDB, Panther
Alliance orthologs ³
Homo sapiens (human):	RPE (ribulose-5-phosphate-3-epimerase)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rpe (ribulose-5-phosphate-3-epimerase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RPEL1 (ribulose-5-phosphate-3-epimerase like 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	rpe (ribulose-5-phosphate-3-epimerase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F08F8.7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	RPE1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rpe	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rpe	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	75,640,867 - 75,661,009 (+)	NCBI		GRCr8
mRatBN7.2	9	68,191,027 - 68,211,295 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	68,191,292 - 68,211,591 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	76,683,016 - 76,701,336 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	81,811,955 - 81,830,275 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	80,206,660 - 80,228,639 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	73,687,684 - 73,713,643 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	73,687,743 - 73,711,571 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	73,592,974 - 73,615,163 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	65,470,071 - 65,490,200 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	65,672,114 - 65,690,468 (+)	NCBI		Celera
Cytogenetic Map	9	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

primary pulmonary hypertension (ISO)

trichorhinophalangeal syndrome type I (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2-methylcholine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

buspirone (EXP)

cadmium dichloride (ISO)

cobalt dichloride (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

ethanol (ISO)

flutamide (EXP)

folic acid (ISO)

furan (EXP)

hydrogen peroxide (ISO)

ivermectin (ISO)

nickel atom (ISO)

ochratoxin A (EXP)

ozone (ISO)

paracetamol (ISO)

phenytoin (EXP)

quercetin (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate metabolic process (IBA,ISO)

pentose-phosphate shunt (IDA,ISO)

pentose-phosphate shunt, non-oxidative branch (IBA,IDA)

Cellular Component

cytosol (IBA,ISO)

Molecular Function

carbohydrate binding (IDA)

D-ribulose-phosphate 3-epimerase activity (IBA,IDA,ISO)

identical protein binding (ISO)

metal ion binding (IBA,ISO)

monosaccharide binding (IDA)

protein binding (ISO)

protein homodimerization activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

pentose and glucuronate interconversion pathway (IEA)

pentose phosphate pathway (IDA,IEA,ISO)

pentose phosphate pathway - non-oxidative phase (TAS)

ribose 5-phosphate isomerase deficiency pathway (ISO)

transaldolase deficiency pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	The pentose phosphate pathway in the endoplasmic reticulum.	Bublitz C and Steavenson S, J Biol Chem. 1988 Sep 15;263(26):12849-53.
2.	The interdependence of glycolytic and pentose cycle intermediates in ad libitum fed rats.	Casazza JP and Veech RL, J Biol Chem. 1986 Jan 15;261(2):690-8.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
6.	GOA pipeline	RGD automated data pipeline
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
9.	A humble hexose monophosphate pathway metabolite regulates short- and long-term control of lipogenesis.	Veech RL Proc Natl Acad Sci U S A. 2003 May 13;100(10):5578-80. Epub 2003 Apr 29.

Additional References at PubMed

PMID:7396409	PMID:16189514	PMID:20923965	PMID:23533145	PMID:25416956

Genomics

Comparative Map Data

Rpe
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	75,640,867 - 75,661,009 (+)	NCBI		GRCr8
mRatBN7.2	9	68,191,027 - 68,211,295 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	68,191,292 - 68,211,591 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	76,683,016 - 76,701,336 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	81,811,955 - 81,830,275 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	80,206,660 - 80,228,639 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	73,687,684 - 73,713,643 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	73,687,743 - 73,711,571 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	73,592,974 - 73,615,163 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	65,470,071 - 65,490,200 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	65,672,114 - 65,690,468 (+)	NCBI		Celera
Cytogenetic Map	9	q32	NCBI

RPE
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	210,002,638 - 210,022,260 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	210,002,565 - 210,022,260 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	210,867,362 - 210,886,984 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	210,575,597 - 210,594,536 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	210,692,886 - 210,711,796	NCBI
Celera	2	204,635,382 - 204,654,317 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI
HuRef	2	202,712,085 - 202,732,295 (+)	NCBI		HuRef
CHM1_1	2	210,873,478 - 210,893,159 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	210,483,346 - 210,502,965 (+)	NCBI		T2T-CHM13v2.0

Rpe
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	66,739,957 - 66,758,964 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	66,739,990 - 66,758,964 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	66,700,797 - 66,719,805 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	66,700,831 - 66,719,805 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	66,747,467 - 66,766,379 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	66,634,101 - 66,653,013 (+)	NCBI		MGSCv36	mm8
Celera	1	67,215,120 - 67,233,622 (+)	NCBI		Celera
Cytogenetic Map	1	C3	NCBI
cM Map	1	33.61	NCBI

Rpe
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955457	5,425,532 - 5,441,538 (-)	NCBI	ChiLan1.0	ChiLan1.0

RPE
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	112,625,893 - 112,645,620 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	112,640,872 - 112,661,872 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	97,260,348 - 97,282,397 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	215,663,592 - 215,685,654 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

RPE
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	17,866,729 - 17,882,702 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	18,747,197 - 18,762,940 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	17,804,510 - 17,820,257 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	17,804,539 - 17,827,714 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	17,757,437 - 17,773,149 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	17,719,697 - 17,735,453 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	17,734,148 - 17,753,357 (+)	NCBI		UU_Cfam_GSD_1.0

Rpe
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	166,331,725 - 166,407,427 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936845	188,414 - 264,070 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPE
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	15	112,723,318 - 112,748,337 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	124,443,417 - 124,460,265 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RPE
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	95,702,525 - 95,721,807 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666040	103,634,078 - 103,652,793 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rpe
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624765	6,205,972 - 6,222,636 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624765	6,188,964 - 6,222,580 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rpe
161 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	193
Count of miRNA genes:	133
Interacting mature miRNAs:	167
Transcripts:	ENSRNOT00000017197
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	32535505	77535505	Rat
11353957	Bmd92	Bone mineral density QTL 92		0.01	tibia mineral mass (VT:1000283)	volumetric bone mineral density (CMO:0001553)	9	46114199	91114199	Rat
61385	Edpm9	Estrogen-dependent pituitary mass QTL 9	3.43	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	63869687	108869687	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	25268044	79271759	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
1578760	Cm53	Cardiac mass QTL 53	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	56771635	101771635	Rat
1581580	Uae34	Urinary albumin excretion QTL 34			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	62072275	96470995	Rat
12879506	Pur33	Proteinuria QTL 33			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	44649921	89649921	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	25661188	100929786	Rat
1598849	Memor17	Memory QTL 17	2.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	49968546	71098346	Rat
10058949	Gmadr5	Adrenal mass QTL 5	2	0.014	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	9	42791513	87976209	Rat
1578757	Pur6	Proteinuria QTL 6	3.3	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	62072275	96470995	Rat
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	55847841	77026453	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	48598251	93598251	Rat
724515	Uae16	Urinary albumin excretion QTL 16	8		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	58163035	100929646	Rat
731171	Glom6	Glomerulus QTL 6	2.8	0.0003	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	9	64573531	109573531	Rat
61352	Bp34	Blood pressure QTL 34	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	42495343	79271511	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	36962359	92058970	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	36962359	77814038	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	23754144	83851531	Rat
6903941	Pur31	Proteinuria QTL 31		0.036	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	9	40194188	85194188	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56627713	78595166	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	36962359	95410867	Rat
11353949	Bp393	Blood pressure QTL 393			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	40194188	85194188	Rat
11353951	Bp394	Blood pressure QTL 394			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	44649921	89649921	Rat
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
1300134	Bp185	Blood pressure QTL 185	3.73		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	61381434	104821652	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	32535505	77535505	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	27468639	72468639	Rat

Markers in Region

BF398855

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	68,208,563 - 68,208,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	73,708,834 - 73,708,996	NCBI	Rnor6.0
Rnor_5.0	9	73,597,621 - 73,597,783	UniSTS	Rnor5.0
RGSC_v3.4	9	65,487,469 - 65,487,631	UniSTS	RGSC3.4
Celera	9	65,687,737 - 65,687,899	UniSTS
RH 3.4 Map	9	612.0	UniSTS
Cytogenetic Map	9	q32	UniSTS

RH140448

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	68,210,879 - 68,211,078 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	73,711,150 - 73,711,348	NCBI	Rnor6.0
Rnor_5.0	9	73,595,269 - 73,595,467	UniSTS	Rnor5.0
RGSC_v3.4	9	65,489,785 - 65,489,983	UniSTS	RGSC3.4
Celera	9	65,690,053 - 65,690,251	UniSTS
RH 3.4 Map	9	615.29	UniSTS
Cytogenetic Map	9	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001033903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC101869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000017197 ⟹ ENSRNOP00000017197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	68,191,343 - 68,211,291 (+)	Ensembl
Rnor_6.0 Ensembl	9	73,687,786 - 73,711,571 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079495 ⟹ ENSRNOP00000069730

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	68,191,329 - 68,211,591 (+)	Ensembl
Rnor_6.0 Ensembl	9	73,687,743 - 73,710,726 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079912

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	73,707,005 - 73,708,063 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116351 ⟹ ENSRNOP00000086710

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	68,191,292 - 68,211,291 (+)	Ensembl

RefSeq Acc Id:

NM_001033903 ⟹ NP_001029075

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,041 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,327 - 68,211,295 (+)	NCBI
Rnor_6.0	9	73,687,786 - 73,711,565 (+)	NCBI
Rnor_5.0	9	73,592,974 - 73,615,163 (-)	NCBI
RGSC_v3.4	9	65,470,071 - 65,490,200 (+)	RGD
Celera	9	65,672,114 - 65,690,468 (+)	RGD

Sequence:

show sequence

CGGCACCATGGCGTCGGGCTGCAAGATCGGCCCGTCCATCCTCAACAGCGACCTGGCCAACCTG
GGGGCCGAGTGCCTGCGCATGCTGGACTCGGGGGCCGACTACCTGCACCTGGATGTAATGGACG
GACATTTTGTTCCCAACATCACTTTTGGTCACCCTGTGGTTGAAAGCCTCCGAAAGCAGCTGGG
CCAGGACCCTTTCTTTGATATGCACATGATGGTTTCTAGGCCAGAACAGTGGGTAAAACCAATG
GCTGTGGCAGGTGCCAATCAATACACCTTTCATCTTGAGGCAACTGAGAACCCAGGGGCTTTGA
TTAAAGACATCCGGGAGAATGGGATGAAGGTTGGCCTTGCCATCAAACCAGGAACTACAGTCGA
ATATTTGGCCCCATGGGCTAATCAAATAGATATGGCCTTGGTAATGACCGTAGAACCTGGGTTT
GGAGGGCAGAAATTCATGGAAGATATGATGCCCAAGGCAGGAGCTAACATGATTGTGTCTGGCA
GTGCCATTATGAGAAGTGATGACCCCAGAGCTGTTATCAACTTACTAAGAAACGTTTGCTCAGA
AGCGGCTCAGAAACGTTCCCTTGACCGATGAAGCCACAAGGAACCCAGTTTCTGCCCATGAACC
CTGTTTTTTACTGGAAACGAGGAATATTGACTACCAATCACATTGCAATTGAAGCAATGCTGCA
TTCCAGTGATTCAAGTCAATTGTGCAGGATGGTCAAGAGGTTAGAAATAACTACCTTTTTAGAG
ATGCCATTTAGAAATTAACGTGGTGAAAAGTATTCACATTTATACTGGGAGAATGATTTTTGTA
AAGAGTGAAAATTTGATTTGTTAAGATTACAGATAGAAATGTGTCTTAATGCCTAAAGAGGAAA
ATTAGCTACTATGAAAAACATTTTTCTGTATTTTTACAAAGAATGTTCTGTTGATTCCCTGGTT
TATCCCTAAAGCAAATGACATCCATATTTTCTCTAGTTCATGTCATTTGTGATTTGTTTATATG
CCTGAGAATATGAATGGAATGAGATGAAAATTAGAAGGTTTGGTGGGGTAGCATGTCATGGTCT
GGTATTTGAATTATTTTTTCTTTTTATCTTATACTTGGTTTATTAAAAACTATAAAAATAATGT
ATGAAGCCTAGGGTTTCTGAAATGCAAGCGCAGACTTATCAAGGTGTCACCTTTGTCACAGCAG
GCTACTCTGTAATTCCTTCCTGCTGCCTCACTCATCCACCATTCCTAGGGGTATGAAATAGAAC
CATACAGTTTCTCTTGGAAGTGCCACTGGGTTGAATACCAATAGAACAGAATATCCTATTCTAG
CTCTTTAATGAAATCACCCATCTTGTTTTCACTATAAACTCTTATATATATTGAATGGAATCAT
AACTATTGTGCATTTGAGAATTAAAAGGGTAACATGGTTTTGGAAGGCCTATACCTAGACTATA
GAGGATGCTCAACATAAAATGGCAAGCATCATGTCTGTTTTGAGTGATTAAGCACTTTTGTATA
ATCAAATTAACTGCTAAATTGTCCTATAATTGTTGGAACAGGTATTCTTTTCCTATTAGAAAAG
TAAGGCTCCACAGTAGCCTGATACATAGAAAACCTGGTATAGCAGAAGCAGTTTCTGGTGGGCA
CTGCTGCTCTGACTACAAACAGAGCTCCTGAGATGTTAGAGAAAAGGAAGTTTACTTTTCTTAT
TTTCAGTGTAACTGTATCCTCTAGCAGAATCAGAGTAAGTCAAGAATACTTGGGAAGTACAGAT
TTTGACCCCAAGGATGGATGGATATATAAAACATTTCTAACAAAGAAGAAGGGAGCTAAGAGAT
GACAGATATTAATACTTGTTTCTATTTTAGCTTACCAAAGGTTTGTTCATTTAATCAAATCACA
CAATACAAGGCATATAGAAATAACTTTAATTAAAAAAACTATGTAGAAGGTTATAATATCAGTC
ATGACAAAGATTTGAATTTATTTGCTGGGACAACTTGTATTTTTCTGGCTTTTGTTCTTTTTCT
TTAAAAATAAATGTACAGTAAAACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

hide sequence

RefSeq Acc Id:

NM_001399122 ⟹ NP_001386051

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,041 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,327 - 68,211,295 (+)	NCBI

RefSeq Acc Id:

NM_001399123 ⟹ NP_001386052

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,041 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,327 - 68,211,295 (+)	NCBI

RefSeq Acc Id:

NM_001399124 ⟹ NP_001386053

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,041 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,327 - 68,211,295 (+)	NCBI

RefSeq Acc Id:

NM_001399125 ⟹ NP_001386054

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,041 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,327 - 68,211,295 (+)	NCBI

RefSeq Acc Id:

NM_001399127 ⟹ NP_001386056

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,041 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,327 - 68,211,295 (+)	NCBI

RefSeq Acc Id:

XM_006245105 ⟹ XP_006245167

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,640,940 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,199 - 68,211,295 (+)	NCBI
Rnor_6.0	9	73,687,690 - 73,711,565 (+)	NCBI
Rnor_5.0	9	73,592,974 - 73,615,163 (-)	NCBI

Sequence:

show sequence

TGCGAGATGGGAGGGGGCGGAGCCAGTGCGGCGCGCCCAATCGAGACGAAGTCTTGGCTGGCCC
GGGCTCTCGTGGGCTCACTCGCTCTAGGGAACCGGCACCATGGCGTCGGGCTGCAAGATCGGCC
CGTCCATCCTCAACAGCGACCTGGCCAACCTGGGGGCCGAGTGCCTGCGCATGCTGGACTCGGG
GGCCGACTACCTGCACCTGGATGTAATGGACGGACATTTTGTTCCCAACATCACTTTTGGTCAC
CCTGTGGTTGAAAGCCTCCGAAAGCAGCTGGGCCAGGACCCTTTCTTTGTCTGTCCTGATGCAA
TGCCACCCTCATATCCAACCCACTTTTTCTTCCTGGATTTAGATATGCACATGATGGTTTCTAG
GCCAGAACAGTGGGTAAAACCAATGGCTGTGGCAGGTGCCAATCAATACACCTTTCATCTTGAG
GCAACTGAGAACCCAGGGGCTTTGATTAAAGACATCCGGGAGAATGGGATGAAGCATTGTTTGT
TACAGGTTGGCCTTGCCATCAAACCAGGAACTACAGTCGAATATTTGGCCCCATGGGCTAATCA
AATAGATATGGCCTTGGTAATGACCGTAGAACCTGGGTTTGGAGGGCAGAAATTCATGGAAGAT
ATGATGCCCAAGGTTCACTGGTTGAGGACCCAGTTCCCAACTTTGGATATAGAGGTCGATGGTG
GAGTAGGTCCTGACACTGTTCAGAAGTGTGCGGAGGCAGGAGCTAACATGATTGTGTCTGGCAG
TGCCATTATGAGAAGTGATGACCCCAGAGCTGTTATCAACTTACTAAGAAACGTTTGCTCAGAA
GCGGCTCAGAAACGTTCCCTTGACCGATGAAGCCACAAGGAACCCAGTTTCTGCCCATGAACCC
TGTTTTTTACTGGAAACGAGGAATATTGACTACCAATCACATTGCAATTGAAGCAATGCTGCAT
TCCAGGGATTCAAGTCAATTGTGCAGGATGGTCAAGAGGTTAGAAATAACTACCTTTTTAGAGA
TGCCATTTAGAAATTAACGTGGTGAAAAGTATTCACATTTATACTGGGAGAATGATTTTTGTAA
AGAGTGAAAATTTGATTTGTTAAGATTACAGATAGAAATGTGTCTTAATGCCTAAAGAGGAAAA
TTAGCTACTATGAAAAACATTTTTCTGTATTTTTACAAAGAATGTTCTGTTGATTCCCTGGTTT
ATCCCTAAAGCAAATGACATCCATATTTTCTCTAGTTCATGTCATTTGTGATTTGTTTATATGC
CTGAGAATATGAATGGAATGAGATGAAAATTAGAAGGTTTGGTGGGGTAGCATGTCATGGTCTG
GTATTTGAATTATTTTTTCTTTTTATCTTATACTTGGTTTATTAAAAACTATAAAAATAATGTA
TGAAGCCTAGGGTTTCTGAAATGCAAGCGCAGACTTATCAAGGTGTCACCTTTGTCACAGCAGG
CTACTCTGTAATTCCTTCCTGCTGCCTCACTCATCCACCATTCCTAGGGGTATGAAATAGAACC
ATACAGTTTCTCTTGGAAGTGCCACTGGGTTGAATACCAATAGAACAGAATATCCTATTCTAGC
TCTTTAATGAAATCACCCATCTTGTTTTCACTATAAACTCTTATATATATTGAATGGAATCATA
ACTATTGTGCATTTGAGAATTAAAAGGGTAACATGGTTTTGGAAGGCCTATACCTAGACTATAG
AGGATGCTCAACATAAAATGGCAAGCATCATGTCTGTTTTGAGTGATTAAGCACTTTTGTATAA
TCAAATTAACTGCTAAATTGTCCTATAATTGTTGGAACAGGTATTCTTTTCCTATTAGAAAAGT
AAGGCTCCACAGTAGCCTGATACATAGAAAACCTGGTATAGCAGAAGCAGTTTCTGGTGGGCAC
TGCTGCTCTGACTACAAACAGAGCTCCTGAGATGTTAGAGAAAAGGAAGTTTACTTTTCTTATT
TTCAGTGTAACTGTATCCTCTAGCAGAATCAGAGTAAGTCAAGAATACTTGGGAAGTACAGATT
TTGACCCCAAGGATGGATGGATATATAAAACATTTCTAACAAAGAAGAAGGGAGCTAAGAGATG
ACAGATATTAATACTTGTTTCTATTTTAGCTTACCAAAGGTTTGTTCATTTAATCAAATCACAC
AATACAAGGCATATAGAAATAACTTTAATTAAAAAAACTATGTAGAAGGTTATAATATCAGTCA
TGACAAAGATTTGAATTTATTTGCTGGGACAACTTGTATTTTTCTGGCTTTTGTTCTTTTTCTT
TAAAAATAAATGTACAGTAAAACTATAA

hide sequence

RefSeq Acc Id:

XM_006245107 ⟹ XP_006245169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,640,961 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,241 - 68,211,295 (+)	NCBI
Rnor_6.0	9	73,687,693 - 73,711,565 (+)	NCBI
Rnor_5.0	9	73,592,974 - 73,615,163 (-)	NCBI

Sequence:

show sequence

GAGATGGGAGGGGGCGGAGCCAGTGCGGCGCGCCCAATCGAGACGAAGTCTTGGCTGGCCCGGG
CTCTCGTGGGCTCACTCGCTCTAGGGAACCGGCACCATGGCGTCGGGCTGCAAGATCGGCCCGT
CCATCCTCAACAGCGACCTGGCCAACCTGGGGGCCGAGTGCCTGCGCATGCTGGACTCGGGGGC
CGACTACCTGCACCTGGATGTAATGGACGGACATTTTGTTCCCAACATCACTTTTGGTCACCCT
GTGGTTGAAAGCCTCCGAAAGCAGCTGGGCCAGGACCCTTTCTTTGATATGCACATGATGGTTT
CTAGGCCAGAACAGTGGGTAAAACCAATGGCTGTGGCAGGTGCCAATCAATACACCTTTCATCT
TGAGGCAACTGAGAACCCAGGGGCTTTGATTAAAGACATCCGGGAGAATGGGATGAAGCATTGT
TTGTTACAGGTTGGCCTTGCCATCAAACCAGGAACTACAGTCGAATATTTGGCCCCATGGGCTA
ATCAAATAGATATGGCCTTGGTAATGACCGTAGAACCTGGGTTTGGAGGGCAGAAATTCATGGA
AGATATGATGCCCAAGGTTCACTGGTTGAGGACCCAGTTCCCAACTTTGGATATAGAGGTCGAT
GGTGGAGTAGGTCCTGACACTGTTCAGAAGTGTGCGGAGGCAGGAGCTAACATGATTGTGTCTG
GCAGTGCCATTATGAGAAGTGATGACCCCAGAGCTGTTATCAACTTACTAAGAAACGTTTGCTC
AGAAGCGGCTCAGAAACGTTCCCTTGACCGATGAAGCCACAAGGAACCCAGTTTCTGCCCATGA
ACCCTGTTTTTTACTGGAAACGAGGAATATTGACTACCAATCACATTGCAATTGAAGCAATGCT
GCATTCCAGGGATTCAAGTCAATTGTGCAGGATGGTCAAGAGGTTAGAAATAACTACCTTTTTA
GAGATGCCATTTAGAAATTAACGTGGTGAAAAGTATTCACATTTATACTGGGAGAATGATTTTT
GTAAAGAGTGAAAATTTGATTTGTTAAGATTACAGATAGAAATGTGTCTTAATGCCTAAAGAGG
AAAATTAGCTACTATGAAAAACATTTTTCTGTATTTTTACAAAGAATGTTCTGTTGATTCCCTG
GTTTATCCCTAAAGCAAATGACATCCATATTTTCTCTAGTTCATGTCATTTGTGATTTGTTTAT
ATGCCTGAGAATATGAATGGAATGAGATGAAAATTAGAAGGTTTGGTGGGGTAGCATGTCATGG
TCTGGTATTTGAATTATTTTTTCTTTTTATCTTATACTTGGTTTATTAAAAACTATAAAAATAA
TGTATGAAGCCTAGGGTTTCTGAAATGCAAGCGCAGACTTATCAAGGTGTCACCTTTGTCACAG
CAGGCTACTCTGTAATTCCTTCCTGCTGCCTCACTCATCCACCATTCCTAGGGGTATGAAATAG
AACCATACAGTTTCTCTTGGAAGTGCCACTGGGTTGAATACCAATAGAACAGAATATCCTATTC
TAGCTCTTTAATGAAATCACCCATCTTGTTTTCACTATAAACTCTTATATATATTGAATGGAAT
CATAACTATTGTGCATTTGAGAATTAAAAGGGTAACATGGTTTTGGAAGGCCTATACCTAGACT
ATAGAGGATGCTCAACATAAAATGGCAAGCATCATGTCTGTTTTGAGTGATTAAGCACTTTTGT
ATAATCAAATTAACTGCTAAATTGTCCTATAATTGTTGGAACAGGTATTCTTTTCCTATTAGAA
AAGTAAGGCTCCACAGTAGCCTGATACATAGAAAACCTGGTATAGCAGAAGCAGTTTCTGGTGG
GCACTGCTGCTCTGACTACAAACAGAGCTCCTGAGATGTTAGAGAAAAGGAAGTTTACTTTTCT
TATTTTCAGTGTAACTGTATCCTCTAGCAGAATCAGAGTAAGTCAAGAATACTTGGGAAGTACA
GATTTTGACCCCAAGGATGGATGGATATATAAAACATTTCTAACAAAGAAGAAGGGAGCTAAGA
GATGACAGATATTAATACTTGTTTCTATTTTAGCTTACCAAAGGTTTGTTCATTTAATCAAATC
ACACAATACAAGGCATATAGAAATAACTTTAATTAAAAAAACTATGTAGAAGGTTATAATATCA
GTCATGACAAAGATTTGAATTTATTTGCTGGGACAACTTGTATTTTTCTGGCTTTTGTTCTTTT
TCTTTAAAAATAAATGTACAGTAAAACTATAA

hide sequence

RefSeq Acc Id:

XM_008767287 ⟹ XP_008765509

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,640,938 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,167 - 68,211,295 (+)	NCBI
Rnor_6.0	9	73,687,689 - 73,711,565 (+)	NCBI

Sequence:

show sequence

GTGCGAGATGGGAGGGGGCGGAGCCAGTGCGGCGCGCCCAATCGAGACGAAGTCTTGGCTGGCC
CGGGCTCTCGTGGGCTCACTCGCTCTAGGGAACCGGCACCATGGCGTCGGGCTGCAAGATCGGC
CCGTCCATCCTCAACAGCGACCTGGCCAACCTGGGGGCCGAGTGCCTGCGCATGCTGGACTCGG
GGGCCGACTACCTGCACCTGGATGTAATGGACGGACATTTTGTTCCCAACATCACTTTTGGTCA
CCCTGTGGTTGAAAGCCTCCGAAAGCAGCTGGGCCAGGACCCTTTCTTTGGCTCACTTCTCAGT
ACTTTTTATCTTTTATCATCAGTCTGTCCTGATGCAATGCCACCCTCATATCCAACCCACTTTT
TCTTCCTGGATTTAGATATGCACATGATGGTTTCTAGGCCAGAACAGTGGGTAAAACCAATGGC
TGTGGCAGGTGCCAATCAATACACCTTTCATCTTGAGGCAACTGAGAACCCAGGGGCTTTGATT
AAAGACATCCGGGAGAATGGGATGAAGCATTGTTTGTTACAGGTTGGCCTTGCCATCAAACCAG
GAACTACAGTCGAATATTTGGCCCCATGGGCTAATCAAATAGATATGGCCTTGGTAATGACCGT
AGAACCTGGGTTTGGAGGGCAGAAATTCATGGAAGATATGATGCCCAAGGTTCACTGGTTGAGG
ACCCAGTTCCCAACTTTGGATATAGAGGTCGATGGTGGAGTAGGTCCTGACACTGTTCAGAAGT
GTGCGGAGGCAGGAGCTAACATGATTGTGTCTGGCAGTGCCATTATGAGAAGTGATGACCCCAG
AGCTGTTATCAACTTACTAAGAAACGTTTGCTCAGAAGCGGCTCAGAAACGTTCCCTTGACCGA
TGAAGCCACAAGGAACCCAGTTTCTGCCCATGAACCCTGTTTTTTACTGGAAACGAGGAATATT
GACTACCAATCACATTGCAATTGAAGCAATGCTGCATTCCAGGGATTCAAGTCAATTGTGCAGG
ATGGTCAAGAGGTTAGAAATAACTACCTTTTTAGAGATGCCATTTAGAAATTAACGTGGTGAAA
AGTATTCACATTTATACTGGGAGAATGATTTTTGTAAAGAGTGAAAATTTGATTTGTTAAGATT
ACAGATAGAAATGTGTCTTAATGCCTAAAGAGGAAAATTAGCTACTATGAAAAACATTTTTCTG
TATTTTTACAAAGAATGTTCTGTTGATTCCCTGGTTTATCCCTAAAGCAAATGACATCCATATT
TTCTCTAGTTCATGTCATTTGTGATTTGTTTATATGCCTGAGAATATGAATGGAATGAGATGAA
AATTAGAAGGTTTGGTGGGGTAGCATGTCATGGTCTGGTATTTGAATTATTTTTTCTTTTTATC
TTATACTTGGTTTATTAAAAACTATAAAAATAATGTATGAAGCCTAGGGTTTCTGAAATGCAAG
CGCAGACTTATCAAGGTGTCACCTTTGTCACAGCAGGCTACTCTGTAATTCCTTCCTGCTGCCT
CACTCATCCACCATTCCTAGGGGTATGAAATAGAACCATACAGTTTCTCTTGGAAGTGCCACTG
GGTTGAATACCAATAGAACAGAATATCCTATTCTAGCTCTTTAATGAAATCACCCATCTTGTTT
TCACTATAAACTCTTATATATATTGAATGGAATCATAACTATTGTGCATTTGAGAATTAAAAGG
GTAACATGGTTTTGGAAGGCCTATACCTAGACTATAGAGGATGCTCAACATAAAATGGCAAGCA
TCATGTCTGTTTTGAGTGATTAAGCACTTTTGTATAATCAAATTAACTGCTAAATTGTCCTATA
ATTGTTGGAACAGGTATTCTTTTCCTATTAGAAAAGTAAGGCTCCACAGTAGCCTGATACATAG
AAAACCTGGTATAGCAGAAGCAGTTTCTGGTGGGCACTGCTGCTCTGACTACAAACAGAGCTCC
TGAGATGTTAGAGAAAAGGAAGTTTACTTTTCTTATTTTCAGTGTAACTGTATCCTCTAGCAGA
ATCAGAGTAAGTCAAGAATACTTGGGAAGTACAGATTTTGACCCCAAGGATGGATGGATATATA
AAACATTTCTAACAAAGAAGAAGGGAGCTAAGAGATGACAGATATTAATACTTGTTTCTATTTT
AGCTTACCAAAGGTTTGTTCATTTAATCAAATCACACAATACAAGGCATATAGAAATAACTTTA
ATTAAAAAAACTATGTAGAAGGTTATAATATCAGTCATGACAAAGATTTGAATTTATTTGCTGG
GACAACTTGTATTTTTCTGGCTTTTGTTCTTTTTCTTTAAAAATAAATGTACAGTAAAACTATA
A

hide sequence

RefSeq Acc Id:

XM_008767288 ⟹ XP_008765510

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,640,867 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,027 - 68,211,295 (+)	NCBI
Rnor_6.0	9	73,687,684 - 73,711,565 (+)	NCBI

Sequence:

show sequence

AGACAGTGCGAGATGGGAGGGGGCGGAGCCAGTGCGGCGCGCCCAATCGAGACGAAGTCTTGGC
TGGCCCGGGCTCTCGTGGGCTCACTCGCTCTAGGGAACCGGCACCATGGCGTCGGGCTGCAAGA
TCGGCCCGTCCATCCTCAACAGCGACCTGGCCAACCTGGGGGCCGAGTGCCTGCGCATGCTGGA
CTCGGGGGCCGACTACCTGCACCTGGATGTAATGGACGGACATTTTGTTCCCAACATCACTTTT
GGTCACCCTGTGGTTGAAAGCCTCCGAAAGCAGCTGGGCCAGGACCCTTTCTTTGGCTCACTTC
TCAGTACTTTTTATCTTTTATCATCAGTCTGTCCTGATGCAATGCCACCCTCATATCCAACCCA
CTTTTTCTTCCTGGATTTAGATATGCACATGATGGTTTCTAGGCCAGAACAGTGGGTAAAACCA
ATGGCTGTGGCAGGTGCCAATCAATACACCTTTCATCTTGAGGCAACTGAGAACCCAGGGGCTT
TGATTAAAGACATCCGGGAGAATGGGATGAAGCATTGTTTGTTACAGGTTGGCCTTGCCATCAA
ACCAGGAACTACAGTCGAATATTTGGCCCCATGGGCTAATCAAATAGATATGGCCTTGGTAATG
ACCGTAGAACCTGGGTTTGGAGGGCAGAAATTCATGGAAGATATGATGCCCAAGGCAGGAGCTA
ACATGATTGTGTCTGGCAGTGCCATTATGAGAAGTGATGACCCCAGAGCTGTTATCAACTTACT
AAGAAACGTTTGCTCAGAAGCGGCTCAGAAACGTTCCCTTGACCGATGAAGCCACAAGGAACCC
AGTTTCTGCCCATGAACCCTGTTTTTTACTGGAAACGAGGAATATTGACTACCAATCACATTGC
AATTGAAGCAATGCTGCATTCCAGGGATTCAAGTCAATTGTGCAGGATGGTCAAGAGGTTAGAA
ATAACTACCTTTTTAGAGATGCCATTTAGAAATTAACGTGGTGAAAAGTATTCACATTTATACT
GGGAGAATGATTTTTGTAAAGAGTGAAAATTTGATTTGTTAAGATTACAGATAGAAATGTGTCT
TAATGCCTAAAGAGGAAAATTAGCTACTATGAAAAACATTTTTCTGTATTTTTACAAAGAATGT
TCTGTTGATTCCCTGGTTTATCCCTAAAGCAAATGACATCCATATTTTCTCTAGTTCATGTCAT
TTGTGATTTGTTTATATGCCTGAGAATATGAATGGAATGAGATGAAAATTAGAAGGTTTGGTGG
GGTAGCATGTCATGGTCTGGTATTTGAATTATTTTTTCTTTTTATCTTATACTTGGTTTATTAA
AAACTATAAAAATAATGTATGAAGCCTAGGGTTTCTGAAATGCAAGCGCAGACTTATCAAGGTG
TCACCTTTGTCACAGCAGGCTACTCTGTAATTCCTTCCTGCTGCCTCACTCATCCACCATTCCT
AGGGGTATGAAATAGAACCATACAGTTTCTCTTGGAAGTGCCACTGGGTTGAATACCAATAGAA
CAGAATATCCTATTCTAGCTCTTTAATGAAATCACCCATCTTGTTTTCACTATAAACTCTTATA
TATATTGAATGGAATCATAACTATTGTGCATTTGAGAATTAAAAGGGTAACATGGTTTTGGAAG
GCCTATACCTAGACTATAGAGGATGCTCAACATAAAATGGCAAGCATCATGTCTGTTTTGAGTG
ATTAAGCACTTTTGTATAATCAAATTAACTGCTAAATTGTCCTATAATTGTTGGAACAGGTATT
CTTTTCCTATTAGAAAAGTAAGGCTCCACAGTAGCCTGATACATAGAAAACCTGGTATAGCAGA
AGCAGTTTCTGGTGGGCACTGCTGCTCTGACTACAAACAGAGCTCCTGAGATGTTAGAGAAAAG
GAAGTTTACTTTTCTTATTTTCAGTGTAACTGTATCCTCTAGCAGAATCAGAGTAAGTCAAGAA
TACTTGGGAAGTACAGATTTTGACCCCAAGGATGGATGGATATATAAAACATTTCTAACAAAGA
AGAAGGGAGCTAAGAGATGACAGATATTAATACTTGTTTCTATTTTAGCTTACCAAAGGTTTGT
TCATTTAATCAAATCACACAATACAAGGCATATAGAAATAACTTTAATTAAAAAAACTATGTAG
AAGGTTATAATATCAGTCATGACAAAGATTTGAATTTATTTGCTGGGACAACTTGTATTTTTCT
GGCTTTTGTTCTTTTTCTTTAAAAATAAATGTACAGTAAAACTATAA

hide sequence

RefSeq Acc Id:

XM_008767289 ⟹ XP_008765511

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,640,984 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,304 - 68,211,295 (+)	NCBI
Rnor_6.0	9	73,687,820 - 73,711,565 (+)	NCBI

Sequence:

show sequence

TCCATCCTCAACAGCGACCTGGCCAACCTGGGGGCCGAGTGCCTGCGCATGCTGGACTCGGGGG
CCGACTACCTGCACCTGGATACATTTTGTTCCCAACATCACTTTTGGTCACCCTGTGGTTGAAA
GCCTCCGAAAGCAGCTGGGCCAGGACCCTTTCTTTGGCTCACTTCTCAGTACTTTTTATCTTTT
ATCATCAGTCTGTCCTGATGCAATGCCACCCTCATATCCAACCCACTTTTTCTTCCTGGATTTA
GATATGCACATGATGGTTTCTAGGCCAGAACAGTGGGTAAAACCAATGGCTGTGGCAGGTGCCA
ATCAATACACCTTTCATCTTGAGGCAACTGAGAACCCAGGGGCTTTGATTAAAGACATCCGGGA
GAATGGGATGAAGCATTGTTTGTTACAGGTTGGCCTTGCCATCAAACCAGGAACTACAGTCGAA
TATTTGGCCCCATGGGCTAATCAAATAGATATGGCCTTGGTAATGACCGTAGAACCTGGGTTTG
GAGGGCAGAAATTCATGGAAGATATGATGCCCAAGGTTCACTGGTTGAGGACCCAGTTCCCAAC
TTTGGATATAGAGGTCGATGGTGGAGTAGGTCCTGACACTGTTCAGAAGTGTGCGGAGGCAGGA
GCTAACATGATTGTGTCTGGCAGTGCCATTATGAGAAGTGATGACCCCAGAGCTGTTATCAACT
TACTAAGAAACGTTTGCTCAGAAGCGGCTCAGAAACGTTCCCTTGACCGATGAAGCCACAAGGA
ACCCAGTTTCTGCCCATGAACCCTGTTTTTTACTGGAAACGAGGAATATTGACTACCAATCACA
TTGCAATTGAAGCAATGCTGCATTCCAGGGATTCAAGTCAATTGTGCAGGATGGTCAAGAGGTT
AGAAATAACTACCTTTTTAGAGATGCCATTTAGAAATTAACGTGGTGAAAAGTATTCACATTTA
TACTGGGAGAATGATTTTTGTAAAGAGTGAAAATTTGATTTGTTAAGATTACAGATAGAAATGT
GTCTTAATGCCTAAAGAGGAAAATTAGCTACTATGAAAAACATTTTTCTGTATTTTTACAAAGA
ATGTTCTGTTGATTCCCTGGTTTATCCCTAAAGCAAATGACATCCATATTTTCTCTAGTTCATG
TCATTTGTGATTTGTTTATATGCCTGAGAATATGAATGGAATGAGATGAAAATTAGAAGGTTTG
GTGGGGTAGCATGTCATGGTCTGGTATTTGAATTATTTTTTCTTTTTATCTTATACTTGGTTTA
TTAAAAACTATAAAAATAATGTATGAAGCCTAGGGTTTCTGAAATGCAAGCGCAGACTTATCAA
GGTGTCACCTTTGTCACAGCAGGCTACTCTGTAATTCCTTCCTGCTGCCTCACTCATCCACCAT
TCCTAGGGGTATGAAATAGAACCATACAGTTTCTCTTGGAAGTGCCACTGGGTTGAATACCAAT
AGAACAGAATATCCTATTCTAGCTCTTTAATGAAATCACCCATCTTGTTTTCACTATAAACTCT
TATATATATTGAATGGAATCATAACTATTGTGCATTTGAGAATTAAAAGGGTAACATGGTTTTG
GAAGGCCTATACCTAGACTATAGAGGATGCTCAACATAAAATGGCAAGCATCATGTCTGTTTTG
AGTGATTAAGCACTTTTGTATAATCAAATTAACTGCTAAATTGTCCTATAATTGTTGGAACAGG
TATTCTTTTCCTATTAGAAAAGTAAGGCTCCACAGTAGCCTGATACATAGAAAACCTGGTATAG
CAGAAGCAGTTTCTGGTGGGCACTGCTGCTCTGACTACAAACAGAGCTCCTGAGATGTTAGAGA
AAAGGAAGTTTACTTTTCTTATTTTCAGTGTAACTGTATCCTCTAGCAGAATCAGAGTAAGTCA
AGAATACTTGGGAAGTACAGATTTTGACCCCAAGGATGGATGGATATATAAAACATTTCTAACA
AAGAAGAAGGGAGCTAAGAGATGACAGATATTAATACTTGTTTCTATTTTAGCTTACCAAAGGT
TTGTTCATTTAATCAAATCACACAATACAAGGCATATAGAAATAACTTTAATTAAAAAAACTAT
GTAGAAGGTTATAATATCAGTCATGACAAAGATTTGAATTTATTTGCTGGGACAACTTGTATTT
TTCTGGCTTTTGTTCTTTTTCTTTAAAAATAAATGTACAGTAAAACTATAA

hide sequence

RefSeq Acc Id:

XM_039084097 ⟹ XP_038940025

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,122 - 75,661,009 (+)	NCBI
mRatBN7.2	9	68,191,304 - 68,211,295 (+)	NCBI

RefSeq Acc Id:

XM_063267618 ⟹ XP_063123688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,640,945 - 75,661,009 (+)	NCBI

RefSeq Acc Id:

XM_063267619 ⟹ XP_063123689

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,640,948 - 75,661,009 (+)	NCBI

RefSeq Acc Id:

XM_063267620 ⟹ XP_063123690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	75,641,024 - 75,661,009 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001029075	(Get FASTA)	NCBI Sequence Viewer
	NP_001386051	(Get FASTA)	NCBI Sequence Viewer
	NP_001386052	(Get FASTA)	NCBI Sequence Viewer
	NP_001386053	(Get FASTA)	NCBI Sequence Viewer
	NP_001386054	(Get FASTA)	NCBI Sequence Viewer
	NP_001386056	(Get FASTA)	NCBI Sequence Viewer
	XP_006245167	(Get FASTA)	NCBI Sequence Viewer
	XP_006245169	(Get FASTA)	NCBI Sequence Viewer
	XP_008765509	(Get FASTA)	NCBI Sequence Viewer
	XP_008765510	(Get FASTA)	NCBI Sequence Viewer
	XP_008765511	(Get FASTA)	NCBI Sequence Viewer
	XP_038940025	(Get FASTA)	NCBI Sequence Viewer
	XP_063123688	(Get FASTA)	NCBI Sequence Viewer
	XP_063123689	(Get FASTA)	NCBI Sequence Viewer
	XP_063123690	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI01870	(Get FASTA)	NCBI Sequence Viewer
	EDL75294	(Get FASTA)	NCBI Sequence Viewer
	EDL75295	(Get FASTA)	NCBI Sequence Viewer
	EDL75296	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000017197.5
	ENSRNOP00000069730.2
	ENSRNOP00000086710.1

RefSeq Acc Id:	NP_001029075 ⟸ NM_001033903
- Peptide Label:	isoform 4
- UniProtKB:	Q3MIF0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQD PFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTTVEYL APWANQIDMALVMTVEPGFGGQKFMEDMMPKAGANMIVSGSAIMRSDDPRAVINLLRNVCSEAA QKRSLDR hide sequence

RefSeq Acc Id:

XP_006245167 ⟸ XM_006245105

- Peptide Label:

isoform X2

- Sequence:

show sequence

MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQD
PFFVCPDAMPPSYPTHFFFLDLDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIR
ENGMKHCLLQVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFP
TLDIEVDGGVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRNVCSEAAQKRSLDR

hide sequence

RefSeq Acc Id:	XP_006245169 ⟸ XM_006245107
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2JW38 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQD PFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKHCLLQVGLAIKPGT TVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPTLDIEVDGGVGPDTVQKCA EAGANMIVSGSAIMRSDDPRAVINLLRNVCSEAAQKRSLDR hide sequence

RefSeq Acc Id:

XP_008765510 ⟸ XM_008767288

- Peptide Label:

isoform X3

- Sequence:

show sequence

MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQD
PFFGSLLSTFYLLSSVCPDAMPPSYPTHFFFLDLDMHMMVSRPEQWVKPMAVAGANQYTFHLEA
TENPGALIKDIRENGMKHCLLQVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDM
MPKAGANMIVSGSAIMRSDDPRAVINLLRNVCSEAAQKRSLDR

hide sequence

RefSeq Acc Id:

XP_008765509 ⟸ XM_008767287

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQD
PFFGSLLSTFYLLSSVCPDAMPPSYPTHFFFLDLDMHMMVSRPEQWVKPMAVAGANQYTFHLEA
TENPGALIKDIRENGMKHCLLQVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDM
MPKVHWLRTQFPTLDIEVDGGVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRNVCSEA
AQKRSLDR

hide sequence

RefSeq Acc Id:	XP_008765511 ⟸ XM_008767289
- Peptide Label:	isoform X7
- Sequence:	show sequence MPPSYPTHFFFLDLDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKHCL LQVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPTLDIEVDG GVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRNVCSEAAQKRSLDR hide sequence

Ensembl Acc Id:

ENSRNOP00000069730 ⟸ ENSRNOT00000079495

Ensembl Acc Id:

ENSRNOP00000017197 ⟸ ENSRNOT00000017197

RefSeq Acc Id:	XP_038940025 ⟸ XM_039084097
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000086710 ⟸ ENSRNOT00000116351

RefSeq Acc Id:	NP_001386051 ⟸ NM_001399122
- Peptide Label:	isoform 1
- UniProtKB:	A0A8I6GEB4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001386052 ⟸ NM_001399123
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001386053 ⟸ NM_001399124
- Peptide Label:	isoform 3
- UniProtKB:	A6KFD1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001386054 ⟸ NM_001399125
- Peptide Label:	isoform 5

RefSeq Acc Id:	NP_001386056 ⟸ NM_001399127
- Peptide Label:	isoform 6
- UniProtKB:	A6KFD3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123688 ⟸ XM_063267618
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063123689 ⟸ XM_063267619
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063123690 ⟸ XM_063267620
- Peptide Label:	isoform X8

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JW38-F1-model_v2	AlphaFold	A0A0G2JW38	1-228	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696730

Promoter ID:

EPDNEW_R7248

Type:

initiation region

Name:

Rpe_1

Description:

ribulose-5-phosphate-3-epimerase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	73,687,770 - 73,687,830	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564890	AgrOrtholog
BioCyc Gene	G2FUF-27291	BioCyc
BioCyc Pathway	NONOXIPENT-PWY [pentose phosphate pathway (non-oxidative branch) I]	BioCyc
BioCyc Pathway Image	NONOXIPENT-PWY	BioCyc
Ensembl Genes	ENSRNOG00000038085	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017197.8	UniProtKB/TrEMBL
	ENSRNOT00000079495.2	UniProtKB/TrEMBL
	ENSRNOT00000116351.1	UniProtKB/TrEMBL
Gene3D-CATH	3.20.20.70	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:5621971	IMAGE-MGC_LOAD
InterPro	Aldolase_TIM	UniProtKB/TrEMBL
	Ribul_P_3_epim	UniProtKB/TrEMBL
	Ribul_P_3_epim	UniProtKB/TrEMBL
	RibuloseP-bd_barrel	UniProtKB/TrEMBL
KEGG Report	rno:501157	UniProtKB/TrEMBL
MGC_CLONE	MGC:124653	IMAGE-MGC_LOAD
NCBI Gene	501157	ENTREZGENE
PANTHER	Ribul_P_3_epim	UniProtKB/TrEMBL
	RIBULOSE-PHOSPHATE 3-EPIMERASE-RELATED	UniProtKB/TrEMBL
Pfam	Ribul_P_3_epim	UniProtKB/TrEMBL
PhenoGen	Rpe	PhenoGen
PIRSF	RPE	UniProtKB/TrEMBL
PROSITE	RIBUL_P_3_EPIMER_1	UniProtKB/TrEMBL
	RIBUL_P_3_EPIMER_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000038085	RatGTEx
Superfamily-SCOP	RibP_bind_barrel	UniProtKB/TrEMBL
UniProt	A0A0G2JW38	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GEB4	ENTREZGENE, UniProtKB/TrEMBL
	A6KFD1	ENTREZGENE, UniProtKB/TrEMBL
	A6KFD3	ENTREZGENE, UniProtKB/TrEMBL
	Q3MIF0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-06	Rpe	ribulose-5-phosphate-3-epimerase	MGC124653	similar to Ribulose-5-phosphate-3-epimerase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	MGC124653	similar to Ribulose-5-phosphate-3-epimerase			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

BioCyc Pathways

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Imported Disease Annotations - ClinVar

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

BioCyc Pathways