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Gene: Rprd1a (regulation of nuclear pre-mRNA domain containing 1A) Rattus norvegicus

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Symbol:

Rprd1a

Name:

regulation of nuclear pre-mRNA domain containing 1A

RGD ID:

1307374

Description:

Predicted to enable RNA polymerase II complex binding activity and identical protein binding activity. Predicted to be involved in RNA polymerase II promoter clearance and mRNA 3'-end processing. Predicted to be located in nucleus. Predicted to be part of transcription preinitiation complex. Orthologous to human RPRD1A (regulation of nuclear pre-mRNA domain containing 1A); INTERACTS WITH 6-propyl-2-thiouracil; amitrole; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cyclin-dependent kinase 2B-inhibitor-related protein; LOC291736; P15rs; regulation of nuclear pre-mRNA domain-containing protein 1A; RGD1307374; similar to hypothetical protein MGC36325

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

Rprd1a^{Tn(sb-T2/Bart3)2.247Mcwi}

Genetic Models:

F344-Rprd1a^{Tn(sb-T2/Bart3)2.247Mcwi}

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	16,066,169 - 16,114,102 (-)	NCBI		GRCr8
mRatBN7.2	18	15,791,418 - 15,839,338 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	15,791,418 - 15,839,338 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	15,978,782 - 16,026,350 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	16,761,496 - 16,809,063 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	16,050,053 - 16,097,579 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	16,450,160 - 16,497,913 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	16,453,369 - 16,497,886 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	16,209,135 - 16,256,883 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	16,283,291 - 16,328,357 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	16,309,731 - 16,356,467 (-)	NCBI
Celera	18	15,721,452 - 15,768,465 (-)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(2,4,5-trichlorophenoxy)acetic acid (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

chloropicrin (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

ivermectin (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-ethyl-N-nitrosourea (EXP)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

vincristine (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

mRNA 3'-end processing (IBA)

regulation of transcription by RNA polymerase II (IEA)

RNA polymerase II promoter clearance (ISO)

Cellular Component

nucleus (ISO)

transcription preinitiation complex (ISO)

Molecular Function

identical protein binding (ISO)

protein binding (ISO)

RNA polymerase II C-terminal domain binding (IEA)

RNA polymerase II complex binding (IBA)

RNA polymerase II CTD heptapeptide repeat phosphatase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:22231121	PMID:24997600

Genomics

Comparative Map Data

Rprd1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	16,066,169 - 16,114,102 (-)	NCBI		GRCr8
mRatBN7.2	18	15,791,418 - 15,839,338 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	15,791,418 - 15,839,338 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	15,978,782 - 16,026,350 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	16,761,496 - 16,809,063 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	16,050,053 - 16,097,579 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	16,450,160 - 16,497,913 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	16,453,369 - 16,497,886 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	16,209,135 - 16,256,883 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	16,283,291 - 16,328,357 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	16,309,731 - 16,356,467 (-)	NCBI
Celera	18	15,721,452 - 15,768,465 (-)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

RPRD1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	35,989,824 - 36,067,559 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	35,984,387 - 36,067,576 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	33,569,787 - 33,647,522 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	31,823,789 - 31,901,371 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	18	30,377,670 - 30,455,253 (-)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI
HuRef	18	30,428,724 - 30,506,362 (-)	NCBI		HuRef
CHM1_1	18	33,496,809 - 33,574,427 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	36,181,320 - 36,259,091 (-)	NCBI		T2T-CHM13v2.0

Rprd1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	24,618,017 - 24,663,306 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	24,618,017 - 24,663,261 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	24,484,960 - 24,530,235 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	24,484,960 - 24,530,204 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	24,643,463 - 24,688,705 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	24,627,972 - 24,673,214 (-)	NCBI		MGSCv36	mm8
Celera	18	24,973,427 - 25,018,811 (-)	NCBI		Celera
Cytogenetic Map	18	A2	NCBI
cM Map	18	13.18	NCBI

Rprd1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	22,584,600 - 22,646,046 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	22,584,600 - 22,646,046 (-)	NCBI	ChiLan1.0	ChiLan1.0

RPRD1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	53,385,357 - 53,463,623 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	39,077,946 - 39,156,211 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	29,242,080 - 29,320,372 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	32,800,352 - 32,878,544 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	32,800,352 - 32,878,544 (-)	Ensembl	panpan1.1		panPan2

RPRD1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	54,105,270 - 54,187,280 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	54,105,456 - 54,184,583 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	53,530,988 - 53,613,065 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	54,075,526 - 54,158,021 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	54,075,544 - 54,158,021 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	53,758,955 - 53,841,051 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	53,782,221 - 53,864,365 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	54,074,683 - 54,156,853 (+)	NCBI		UU_Cfam_GSD_1.0

Rprd1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	49,880,457 - 49,939,546 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936517	9,207,738 - 9,266,952 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936517	9,207,840 - 9,266,948 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPRD1A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	119,762,812 - 119,834,012 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	119,762,810 - 119,834,022 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	112,288,593 - 112,359,815 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RPRD1A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	44,735,013 - 44,808,023 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	44,734,911 - 44,808,178 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	19,195,604 - 19,268,609 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rprd1a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624779	10,301,878 - 10,371,184 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624779	10,299,378 - 10,371,213 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rprd1a
195 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	103
Count of miRNA genes:	88
Interacting mature miRNAs:	97
Transcripts:	ENSRNOT00000021624
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301410	Bp317	Blood pressure QTL 317		0.004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	11944273	26548295	Rat
1358358	Sradr6	Stress Responsive Adrenal Weight QTL 6	2.49		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	18	11944299	59330563	Rat
61382	Bp46	Blood pressure QTL 46	18.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11941791	31393320	Rat
8552968	Pigfal19	Plasma insulin-like growth factor 1 level QTL 19	11.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	18	1	25758124	Rat
61388	Bp2	Blood pressure QTL 2	3.23		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	1	35374722	Rat
1331781	Scl28	Serum cholesterol level QTL 28	3.995		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	18	11944299	24797117	Rat
6903359	Bp355	Blood pressure QTL 355	3.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11944544	59796478	Rat
2313082	Bss85	Bone structure and strength QTL 85	0.8	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	18	14951337	59951337	Rat
2312568	Glom21	Glomerulus QTL 21	2	0.005	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	5185858	40503530	Rat
1331766	Bp236	Blood pressure QTL 236	3.022		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	11944299	31359530	Rat
631264	Scl22	Serum cholesterol level QTL 22	6.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	18	11941791	31393320	Rat
12904680	Bw189	Body weight QTL 189		0.019	body mass (VT:0001259)	body weight (CMO:0000012)	18	11944273	26548295	Rat
2293708	Bss46	Bone structure and strength QTL 46	8.8	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	18	11791518	63636873	Rat
1641910	Colcr3	Colorectal carcinoma resistance QTL 3	5.02	0.000007	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	18	2249477	22066430	Rat
12904693	Am20	Aortic mass QTL 20		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	11944273	26548295	Rat
9589153	Insul31	Insulin level QTL 31	7.15	0.05	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	18	1	42547119	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	11791518	83218561	Rat
12904695	Kidm73	Kidney mass QTL 73		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	11944273	26548295	Rat
2312598	Bp340	Blood pressure QTL 340		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	1	30558703	Rat
12904689	Cm128	Cardiac mass QTL 128		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	11944273	26548295	Rat
12904690	Cm129	Cardiac mass QTL 129		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	11944273	26548295	Rat
2300180	Bmd67	Bone mineral density QTL 67	4.8	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	18	1	34291613	Rat
12904691	Cm130	Cardiac mass QTL 130		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	11944273	26548295	Rat
9590248	Scort10	Serum corticosterone level QTL 10	19.71	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	1	25758124	Rat
2299160	Iddm35	Insulin dependent diabetes mellitus QTL 35	2.79		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	18	4207941	60377792	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	11791518	83218561	Rat
1331753	Bp231	Blood pressure QTL 231	3.643		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11944299	52293055	Rat
2293661	Bss50	Bone structure and strength QTL 50	4.64	0.0003	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	18	1	34291613	Rat
61375	Bp41	Blood pressure QTL 41	2.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	18	11944299	41122201	Rat

Markers in Region

RH137088

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	15,812,912 - 15,813,095 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	16,471,654 - 16,471,836	NCBI	Rnor6.0
Rnor_5.0	18	16,230,626 - 16,230,808	UniSTS	Rnor5.0
RGSC_v3.4	18	16,301,767 - 16,301,949	UniSTS	RGSC3.4
Celera	18	15,742,942 - 15,743,124	UniSTS
RH 3.4 Map	18	192.6	UniSTS
Cytogenetic Map	18	p12	UniSTS

Genetic Models

This gene Rprd1a is modified in the following models/strains:

F344-Rprd1a^{Tn(sb-T2/Bart3)2.247Mcwi}

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001305179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_214609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021624 ⟹ ENSRNOP00000021624

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	15,791,418 - 15,839,338 (-)	Ensembl
Rnor_6.0 Ensembl	18	16,453,369 - 16,497,886 (-)	Ensembl

RefSeq Acc Id:

NM_001305179 ⟹ NP_001292108

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,066,169 - 16,114,087 (-)	NCBI
mRatBN7.2	18	15,791,418 - 15,839,338 (-)	NCBI
Rnor_6.0	18	16,450,160 - 16,497,913 (-)	NCBI
Celera	18	15,721,452 - 15,768,465 (-)	NCBI

Sequence:

show sequence

GCTAGATTGCGACCAGCCTCGGACTCGGGGGTGGTAGTGGTGAGGGCGTGGGGAAGGGTGGGGT
GTGGGGGCGAGGCGGCGACGAGGGCGGCGACACTCTCCTCCCCTCAGCTCCACGGCGTGGGACG
GCGCGAACGTGGTTTTGGAGGGATGTCCGCCTTCTCTGAGGCGGCGCTGGAGAAGAAGCTGTCC
GAGTTGAGCAACTCGCAGCAGAGCGTGCAGACCCTGTCCCTGTGGCTCATCCACCATCGCAAAC
ACTCGCGGCCCATCGTCACGGTGTGGGAGCGGGAGCTACGCAAAGCCAAACCCAACAGGAAGCT
TACTTTTCTCTACTTGGCCAATGATGTCATTCAAAACAGCAAAAGGAAGGGGCCAGAGTTCACA
AAAGATTTTGCACCAGTAATAGTGGAGGCATTCAAGCATGTTTCAAGTGAAACTGATGAAAGCT
GTAAGAAGCACCTTGGGAGAGTATTATCCATTTGGGAAGAGCGGTCTGTTTATGAAAACGATGT
ATTAGAACAACTTAAGCACGCTCTGTATGGAGATAAGAAGACGAGGAAGAGGACTTATGAGCAA
ATAAAGGTGGATGAGAATGAAAATTGTTCCTCTCTAGGGTCCCCAAGTGAACCACCACAGACTC
TCGACCTTGTTAGAGCATTACAAGATTTAGAAAATGCAGCCTCAGGTGATGCAGCAGTCCATCA
AAGGATAGCTTCTTTGCCTGTTGAAGTTCAAGAAGTATCCCTGCTCGAGAAAATAACAGATAAA
GAATCTGGAGAAAGGCTTTCTAAGATGGTGGAAGACGCTTGTATGCTGCTGGCAGACTATAATG
GCAGACTGGCAGCAGAAATAGACGACAGAAAGCAACTCACTCGGATGTTAGCGGACTTTCTTCG
TTGTCAAAAGGAAGCCCTTGCAGAGAAAGAACATAAATTGGAAGAATACAAGCGCAAGTTAGCC
CGAGTTTCCTTGGTACGAAAAGAACTCAGAGCCCGGATCCAGAGCCTGCCAGATTTATCTCGTT
TGCCCAATGTCACTGGCAGTCACATGCACCTGCCCTTTGCTGGGGACATCTACAGTGAAGACTG
ATGGCCAGTCTCCTCCAGGGCCAGGACTTTGCCAGACATGGAGACAGGTTAGGTGAATAGTCCT
GTAGAGTTATTTTTGTACATTGTTGAGAGAATGGTACTAACACAAGAAATGACAAGGCAGTATA
AAATGTCTAAAATGTTGGTTTGTTTTACTATTTTATTGGTGAGTTAACACGACTTAGTTAAAAC
CAAGTGATTTCTGTGTATTAATGAACTTAATGATTATTTTCAAAATATCTTTTGTAAATTTTTT
TTTGATCCAAGGCCTTGTGAAAAATTCCATGTTTCTATTTCTTCATGTATTTTCAATTATTTTT
CTTTATTTTTTTTCAGTATCTAATCACTGTACACTCTCTAATTCCTAATGAGAAGAACTGATCA
GGAGCTGATGTGAGACTGTTTTTGGGATCGTTAGGACTTGATTATAGAAGAGACTTAAGTGTTT
GAACTTCACCTTTACTCTTGCCACCAAATACTGGTTCTGTGTGTCCTCATGCCTTTTGAGTTTT
AACGCTAGACATGGATGCCATGTGCAGGGTCAAATTAAAGCCTAGAGAATGTTTCCCCGATAGC
ACTATAGTAGTTCCATCCCAAATGCCATCCCAGAATAAGAGGCCTGTTAAATAGAGTCCCTTGA
TCACACTATTTAGAACTAAGTGCAGTTAATGCTTTGAGAATGTTGCAAGTTCTGACATCCTACC
AAGAGGACAACTCCAGGCCTACAGCTGACTGCTTCTGTCAGGTCAGTTTTCTTTACATCAGATC
CCTTTAACAAAACACCAGCCGTGGGGAGGAAAGAAAGGACGCATCAGATGGCGACATGCTTAAT
CCCTGTGATGTAATGTAAACAATAGCTCTTAGCTTGATTAGCTCAACAACTCAGTATCCATAAT
GTCCAATTAAGTTGCCCGGAACACTTTATTTCCGTAAGGTTTTGAATGACTGTATATTTTGGAA
TTACGCAATGCTGTACTACAGGGTAGATGTAGTGAGTTTTATATTTGTATGTTTACAGATGTAA
ATACACAGCAAATGTACCTGTACCTTTACTTGAACCTGGTGTGGGAGAGCAGTTGCATGCTCCT
CTCCAGCTTTCTTCTAAGTTACATTGTGAGCCTGCAGGTTTGTGTTTCATAACGACAGAAGGGG
GATATTTTTCTCCTTTATTGCTTTGCATTTCTCATGTAATCGGAGTCAAAGTAAATAGTTAATA
GAACACTTTTTAAATTTCACAGGCCAATTATACTCACTATTCTGAACGGCTTCACTCTTTCTTT
CTCAGTATTCGAGGTTATAGTTGAAGTGAATTTACATGTGAAGAAATGACAGTAGATTTGGGAA
CAGTGCTTTAAACACTGACCTCTCTTCAAACAGAGTTACATGTATAACATCACCCATCCCCTGC
ATGTCCTGTCTTCCAAGGATTTAGACAACATTTGGGAGTTAGGACACATTTCCTCACAGAACTT
AGAGCTGTTCTCTGTGCACACTGCTGAAGCTCAACGGGGAGCCAAAACCACCTGACCACGGATA
CACTCATAACGTGGGCAACGAGTGGCTCAAGCACGTCCTGAGCAGCATTTGTCTGTCACAGTAA
GGGGTCTGTGTGCAGCAGCAAGGTCCTCCTCATGCTGGGGTGTCTGCCAGTGCTGCTGTCCTTT
CCTAGGGGGTAGGGGTGGAAGAAAGGACTCAGCAGGAGGGTGCACGGATGCTGCACATGACGCA
CCCTGACTATGCCTGTTTTGAAAGTATGCCAAGTAAGTTAGTTTTTGTTGTTGATGTCTTTGAA
AGCAAAAGCTTTGTGTGTTAACTTATTTTCAGTATCTTGAACTTATTTATGATTTGCTGACACA
GTGATTTATCCATCTAAAAATAGATACTTTTCCATTTAAAACTAATTTATAAATGGTATACTCT
TGGGAAGATATAAAATCTTTTAGAAGTTTCCTGAATATTTTCACCATGAAGACAGACTTAGATA
CTCTTTTGATGCCACTATCTGATCTAAATATTTATGATAAATGTATTATTTTTTTAAAGAGCGT
GATGAGATCTGTGATTAAATGCTAGTACTCAAAACCCGAATCCCCCAAACTTCAAGTTGTTGGT
TAGCTCGCTACCTGAATACAAACTGTACAGTCTGTTCTAGAAGTCAGGTTCTCAGCCTCAGGAG
ATTGCCTTCCTTTCTAAAAGGAAGATGAACTTAATGGGCTTAAACTGGGCGTGGTGGTGCATGC
CTTTAATCTCTGTACTTGGGGGGCAGAGGTAGGAAGATCCCTGTGAGTTTAAGGCCAGTCTGTT
CTGTAGAGTGAGACCCATGCCATTAATTACATGGTGAGACCCTGCATTAAGAAAAAGAAATAAG
AATGGGCTTAGGTGAGGGGTATAAAATACCAAACTCTAAATCATGCACAGTTTCTCTACCGTGT
ACCTGAGGTAAATTACAAGTATGAGAGCAACCTGGCCTGGCCCTCAAGGGAAAGCGTGTCTCAT
TGTAGCAAGGTCCTGTGCTGTGATTGGACACCATTCCTCTTTTCTCCACAAACAGTGCAGAGAG
CTGTCGGAGTGGCAATGTGAGCAGATTCCCCGGTGCTCCCTCTGCTCCTACAACACTACAGTAA
GTAAATGAACTATATGGGGAGCTGGGAGCCTGGAAATGAGCTGTGCTCTATAGCCAGCCTTCCC
TGAGGAAAGCCACCCCACCTAGCTGTTGTGACAGCTGCTCACAGCATTCTGAATCAGGGTTTTC
TCTAAGAAATCCTTTAGCATCAACAAAGTCTAGGATGATCCAGCCATCATGATTGTCAGTTCAG
AGAATGTTGTCTGCTGCCACTGTCATGAGTAGCTTCATGGTGTGTGGCTCATGTACGGTCTGAG
AAGTCTGGAGAGGACAGTGACTGGGAAGGTAGGAGGGCCTTCCTGAATTCCCACTCTGAAATGG
ACAGGATGTGAAGTAACGTAAAGTCCCACATTGCTTTACTAGCTGTTAGGAGTTACTCCTAAAG
ATGAGCCCTGCTTCTCAGTTGTGCCAGAAAAGGCTTTTAACAGTGTGAATTCAGTTCTTCTCTG
TACAGAAAGGGAACACTGGGTTACTCAATGGAGTTGTTTATACACAGCATTCGTTGCCATCGAG
TCTCAGATGGCAGGAGCACATGAGAAGGGGATTCTCCGTCTTTTATAAACCCTTTTCTTTGGCT
GTATCTGATGACAGTGTAAGATCTTAATAAAGTTTTGTGTTCTTTTTGAAGAGTT

hide sequence

RefSeq Acc Id:

XM_063277256 ⟹ XP_063133326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,087,462 - 16,114,102 (-)	NCBI

RefSeq Acc Id:

XM_214609 ⟹ XP_214609

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,066,174 - 16,114,102 (-)	NCBI
mRatBN7.2	18	15,791,421 - 15,839,335 (-)	NCBI
Rnor_6.0	18	16,450,163 - 16,497,910 (-)	NCBI
Rnor_5.0	18	16,209,135 - 16,256,883 (-)	NCBI
RGSC_v3.4	18	16,283,291 - 16,328,357 (-)	RGD

Sequence:

show sequence

AGATTGCGACCAGCCTCGGACTCGGGGGTGGTAGTGGTGAGGGCGTGGGGAAGGGTGGGGTGTG
GGGGCGAGGCGGCGACGAGGGCGGCGACACTCTCCTCCCCTCAGCTCCACGGCGTGGGACGGCG
CGAACGTGGTTTTGGAGGGATGTCCGCCTTCTCTGAGGCGGCGCTGGAGAAGAAGCTGTCCGAG
TTGAGCAACTCGCAGCAGAGCGTGCAGACCCTGTCCCTGTGGCTCATCCACCATCGCAAACACT
CGCGGCCCATCGTCACGGTGTGGGAGCGGGAGCTACGCAAAGCCAAACCCAACAGGAAGCTTAC
TTTTCTCTACTTGGCCAATGATGTCATTCAAAACAGCAAAAGGAAGGGGCCAGAGTTCACAAAA
GATTTTGCACCAGTAATAGTGGAGGCATTCAAGCATGTTTCAAGTGAAACTGATGAAAGCTGTA
AGAAGCACCTTGGGAGAGTATTATCCATTTGGGAAGAGCGGTCTGTTTATGAAAACGATGTATT
AGAACAACTTAAGCACGCTCTGTATGGAGATAAGAAGACGAGGAAGAGGACTTATGAGCAAATA
AAGGTGGATGAGAATGAAAATTGTTCCTCTCTAGGGTCCCCAAGTGAACCACCACAGACTCTCG
ACCTTGTTAGAGCATTACAAGATTTAGAAAATGCAGCCTCAGGTGATGCAGCAGTCCATCAAAG
GATAGCTTCTTTGCCTGTTGAAGTTCAAGAAGTATCCCTGCTCGAGAAAATAACAGATAAAGAA
TCTGGAGAAAGGCTTTCTAAGATGGTGGAAGACGCTTGTATGCTGCTGGCAGACTATAATGGCA
GACTGGCAGCAGAAATAGACGACAGAAAGCAACTCACTCGGATGTTAGCGGACTTTCTTCGTTG
TCAAAAGGAAGCCCTTGCAGAGAAAGAACATAAATTGGAAGAATACAAGCGCAAGTTAGCCCGA
GTTTCCTTGGTACGAAAAGAACTCAGAGCCCGGATCCAGAGCCTGCCAGATTTATCTCGTTTGC
CCAATGTCACTGGCAGTCACATGCACCTGCCCTTTGCTGGGGACATCTACAGTGAAGACTGATG
GCCAGTCTCCTCCAGGGCCAGGACTTTGCCAGACATGGAGACAGTATCTAATCACTGTACACTC
TCTAATTCCTAATGAGAAGAACTGATCAGGAGCTGATGTGAGACTGTTTTTGGGATCGTTAGGA
CTTGATTATAGAAGAGACTTAAGTGTTTGAACTTCACCTTTACTCTTGCCACCAAATACTGGTT
CTGTGTGTCCTCATGCCTTTTGAGTTTTAACGCTAGACATGGATGCCATGTGCAGGGTCAAATT
AAAGCCTAGAGAATGTTTCCCCGATAGCACTATAGTAGTTCCATCCCAAATGCCATCCCAGAAT
AAGAGGCCTGTTAAATAGAGTCCCTTGATCACACTATTTAGAACTAAGTGCAGTTAATGCTTTG
AGAATGTTGCAAGTTCTGACATCCTACCAAGAGGACAACTCCAGGCCTACAGCTGACTGCTTCT
GTCAGGTCAGTTTTCTTTACATCAGATCCCTTTAACAAAACACCAGCCGTGGGGAGGAAAGAAA
GGACGCATCAGATGGCGACATGCTTAATCCCTGTGATGTAATGTAAACAATAGCTCTTAGCTTG
ATTAGCTCAACAACTCAGTATCCATAATGTCCAATTAAGTTGCCCGGAACACTTTATTTCCGTA
AGGTTTTGAATGACTGTATATTTTGGAATTACGCAATGCTGTACTACAGGGTAGATGTAGTGAG
TTTTATATTTGTATGTTTACAGATGTAAATACACAGCAAATGTACCTGTACCTTTACTTGAACC
TGGTGTGGGAGAGCAGTTGCATGCTCCTCTCCAGCTTTCTTCTAAGTTACATTGTGAGCCTGCA
GGTTTGTGTTTCATAACGACAGAAGGGGGATATTTTTCTCCTTTATTGCTTTGCATTTCTCATG
TAATCGGAGTCAAAGTAAATAGTTAATAGAACACTTTTTAAATTTCACAGGCCAATTATACTCA
CTATTCTGAACGGCTTCACTCTTTCTTTCTCAGTATTCGAGGTTATAGTTGAAGTGAATTTACA
TGTGAAGAAATGACAGTAGATTTGGGAACAGTGCTTTAAACACTGACCTCTCTTCAAACAGAGT
TACATGTATAACATCACCCATCCCCTGCATGTCCTGTCTTCCAAGGATTTAGACAACATTTGGG
AGTTAGGACACATTTCCTCACAGAACTTAGAGCTGTTCTCTGTGCACACTGCTGAAGCTCAACG
GGGAGCCAAAACCACCTGACCACGGATACACTCATAACGTGGGCAACGAGTGGCTCAAGCACGT
CCTGAGCAGCATTTGTCTGTCACAGTAAGGGGTCTGTGTGCAGCAGCAAGGTCCTCCTCATGCT
GGGGTGTCTGCCAGTGCTGCTGTCCTTTCCTAGGGGGTAGGGGTGGAAGAAAGGACTCAGCAGG
AGGGTGCACGGATGCTGCACATGACGCACCCTGACTATGCCTGTTTTGAAAGTATGCCAAGTAA
GTTAGTTTTTGTTGTTGATGTCTTTGAAAGCAAAAGCTTTGTGTGTTAACTTATTTTCAGTATC
TTGAACTTATTTATGATTTGCTGACACAGTGATTTATCCATCTAAAAATAGATACTTTTCCATT
TAAAACTAATTTATAAATGGTATACTCTTGGGAAGATATAAAATCTTTTAGAAGTTTCCTGAAT
ATTTTCACCATGAAGACAGACTTAGATACTCTTTTGATGCCACTATCTGATCTAAATATTTATG
ATAAATGTATTATTTTTTTAAAGAGCGTGATGAGATCTGTGATTAAATGCTAGTACTCAAAACC
CGAATCCCCCAAACTTCAAGTTGTTGGTTAGCTCGCTACCTGAATACAAACTGTACAGTCTGTT
CTAGAAGTCAGGTTCTCAGCCTCAGGAGATTGCCTTCCTTTCTAAAAGGAAGATGAACTTAATG
GGCTTAAACTGGGCGTGGTGGTGCATGCCTTTAATCTCTGTACTTGGGGGGCAGAGGTAGGAAG
ATCCCTGTGAGTTTAAGGCCAGTCTGTTCTGTAGAGTGAGACCCATGCCATTAATTACATGGTG
AGACCCTGCATTAAGAAAAAGAAATAAGAATGGGCTTAGGTGAGGGGTATAAAATACCAAACTC
TAAATCATGCACAGTTTCTCTACCGTGTACCTGAGGTAAATTACAAGTATGAGAGCAACCTGGC
CTGGCCCTCAAGGGAAAGCGTGTCTCATTGTAGCAAGGTCCTGTGCTGTGATTGGACACCATTC
CTCTTTTCTCCACAAACAGTGCAGAGAGCTGTCGGAGTGGCAATGTGAGCAGATTCCCCGGTGC
TCCCTCTGCTCCTACAACACTACAGTAAGTAAATGAACTATATGGGGAGCTGGGAGCCTGGAAA
TGAGCTGTGCTCTATAGCCAGCCTTCCCTGAGGAAAGCCACCCCACCTAGCTGTTGTGACAGCT
GCTCACAGCATTCTGAATCAGGGTTTTCTCTAAGAAATCCTTTAGCATCAACAAAGTCTAGGAT
GATCCAGCCATCATGATTGTCAGTTCAGAGAATGTTGTCTGCTGCCACTGTCATGAGTAGCTTC
ATGGTGTGTGGCTCATGTACGGTCTGAGAAGTCTGGAGAGGACAGTGACTGGGAAGGTAGGAGG
GCCTTCCTGAATTCCCACTCTGAAATGGACAGGATGTGAAGTAACGTAAAGTCCCACATTGCTT
TACTAGCTGTTAGGAGTTACTCCTAAAGATGAGCCCTGCTTCTCAGTTGTGCCAGAAAAGGCTT
TTAACAGTGTGAATTCAGTTCTTCTCTGTACAGAAAGGGAACACTGGGTTACTCAATGGAGTTG
TTTATACACAGCATTCGTTGCCATCGAGTCTCAGATGGCAGGAGCACATGAGAAGGGGATTCTC
CGTCTTTTATAAACCCTTTTCTTTGGCTGTATCTGATGACAGTGTAAGATCTTAATAAAGTTTT
GTGTTCTTTTTGAAGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001292108	(Get FASTA)	NCBI Sequence Viewer
	XP_063133326	(Get FASTA)	NCBI Sequence Viewer
	XP_214609	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL76138	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021624.4

RefSeq Acc Id:	XP_214609 ⟸ XM_214609
- Peptide Label:	isoform X1
- UniProtKB:	D4AAU4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLAN DVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHA LYGDKKTRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPV EVQEVSLLEKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALA EKEHKLEEYKRKLARVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED hide sequence

RefSeq Acc Id:

NP_001292108 ⟸ NM_001305179

- UniProtKB:

D4AAU4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLAN
DVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHA
LYGDKKTRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPV
EVQEVSLLEKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALA
EKEHKLEEYKRKLARVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED

hide sequence

Ensembl Acc Id:

ENSRNOP00000021624 ⟸ ENSRNOT00000021624

RefSeq Acc Id:	XP_063133326 ⟸ XM_063277256
- Peptide Label:	isoform X2

Protein Domains

CID

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AAU4-F1-model_v2	AlphaFold	D4AAU4	1-312	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700667

Promoter ID:

EPDNEW_R11188

Type:

multiple initiation site

Name:

Rprd1a_1

Description:

regulation of nuclear pre-mRNA domain containing 1A

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	18	16,497,910 - 16,497,970	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307374	AgrOrtholog
BioCyc Gene	G2FUF-8150	BioCyc
Ensembl Genes	ENSRNOG00000016036	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021624.8	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.90	UniProtKB/TrEMBL
	6.10.250.2560	UniProtKB/TrEMBL
InterPro	CREPT	UniProtKB/TrEMBL
	ENTH_VHS	UniProtKB/TrEMBL
	RNA_polymerase_II_lsu_CTD	UniProtKB/TrEMBL
	RPRD1A_CID	UniProtKB/TrEMBL
KEGG Report	rno:291736	UniProtKB/TrEMBL
NCBI Gene	291736	ENTREZGENE
PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	UniProtKB/TrEMBL
	REGULATION OF NUCLEAR PRE-MRNA DOMAIN-CONTAINING PROTEIN 1A	UniProtKB/TrEMBL
Pfam	CREPT	UniProtKB/TrEMBL
	DUF618	UniProtKB/TrEMBL
PhenoGen	Rprd1a	PhenoGen
PROSITE	CID	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000016036	RatGTEx
SMART	RPR	UniProtKB/TrEMBL
Superfamily-SCOP	ENTH_VHS	UniProtKB/TrEMBL
UniProt	D4AAU4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-24	Rprd1a	regulation of nuclear pre-mRNA domain containing 1A	P15rs	cyclin-dependent kinase 2B-inhibitor-related protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-18	P15rs	cyclin-dependent kinase 2B-inhibitor-related protein	RGD1307374_predicted	similar to hypothetical protein MGC36325 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1307374_predicted	similar to hypothetical protein MGC36325 (predicted)	LOC291736_predicted	similar to hypothetical protein MGC36325 (predicted)	Symbol and Name status set to approved	1331353	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar