Ggnbp2 (gametogenetin binding protein 2)

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Gene: Ggnbp2 (gametogenetin binding protein 2) Rattus norvegicus

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Symbol:

Ggnbp2

Name:

gametogenetin binding protein 2

RGD ID:

1302978

Description:

Predicted to be involved in spermatogenesis. Predicted to act upstream of or within several processes, including labyrinthine layer blood vessel development; negative regulation of cell population proliferation; and negative regulation of protein phosphorylation. Predicted to be located in cytoplasmic vesicle. Predicted to be active in cytoplasm and nucleus. Orthologous to human GGNBP2 (gametogenetin binding protein 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; resveratrol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

gametogenetin-binding protein 2; ZFP403; zinc finger protein 403; Znf403

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GGNBP2 (gametogenetin binding protein 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Ggnbp2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ggnbp2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GGNBP2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GGNBP2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ggnbp2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GGNBP2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GGNBP2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ggnbp2 (gametogenetin binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	GGNBP2 (gametogenetin binding protein 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ggnbp2 (gametogenetin binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ggnbp2 (gametogenetin binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG2182	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ggnbp2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	70,208,950 - 70,240,554 (-)	NCBI		GRCr8
mRatBN7.2	10	69,711,527 - 69,743,134 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	69,711,532 - 69,743,365 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	74,331,528 - 74,362,862 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	73,836,295 - 73,867,629 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	69,300,962 - 69,332,296 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	72,156,729 - 72,188,834 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	72,156,728 - 72,188,308 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	73,114,838 - 73,146,171 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	73,129,208 - 73,160,541 (-)	NCBI
Celera	10	68,639,481 - 68,670,565 (-)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

chromosome 17q12 deletion syndrome (ISO)

Developmental Disease (ISO)

hyperphosphatasia with impaired intellectual development syndrome 5 (ISO)

Neurodevelopmental Disorders (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

4-hydroxyphenyl retinamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP)

cadmium dichloride (ISO)

caffeine (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

coumarin (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

hydrogen peroxide (ISO)

methotrexate (ISO)

phenobarbital (ISO)

propiconazole (ISO)

rac-lactic acid (ISO)

resveratrol (EXP,ISO)

sodium arsenite (ISO)

tetrachloromethane (ISO)

thiram (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IEA,ISO)

labyrinthine layer blood vessel development (IEA,ISO)

labyrinthine layer development (ISO)

negative regulation of cell population proliferation (IEA,ISO)

negative regulation of gene expression (IEA,ISO)

negative regulation of protein tyrosine kinase activity (ISO)

negative regulation of receptor signaling pathway via STAT (ISO)

negative regulation of tyrosine phosphorylation of STAT protein (ISO)

spermatogenesis (IEA)

Cellular Component

cytoplasm (IBA,IEA,ISO)

cytoplasmic vesicle (IEA)

nucleus (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Dioxin induces a novel nuclear factor, DIF-3, that is implicated in spermatogenesis.	Ohbayashi T, etal., FEBS Lett 2001 Nov 23;508(3):341-4.
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15642376	PMID:26764350

Genomics

Comparative Map Data

Ggnbp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	70,208,950 - 70,240,554 (-)	NCBI		GRCr8
mRatBN7.2	10	69,711,527 - 69,743,134 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	69,711,532 - 69,743,365 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	74,331,528 - 74,362,862 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	73,836,295 - 73,867,629 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	69,300,962 - 69,332,296 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	72,156,729 - 72,188,834 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	72,156,728 - 72,188,308 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	73,114,838 - 73,146,171 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	73,129,208 - 73,160,541 (-)	NCBI
Celera	10	68,639,481 - 68,670,565 (-)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

GGNBP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	36,544,919 - 36,589,848 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	36,544,912 - 36,589,848 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	34,900,768 - 34,946,278 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	31,974,917 - 32,020,391 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	31,723,010 - 31,768,554 (+)	NCBI		Celera
Cytogenetic Map	17	q12	NCBI
HuRef	17	30,837,504 - 30,883,611 (+)	NCBI		HuRef
CHM1_1	17	34,936,451 - 34,981,411 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	37,530,672 - 37,576,192 (+)	NCBI		T2T-CHM13v2.0

Ggnbp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	84,723,187 - 84,761,668 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	84,723,187 - 84,761,643 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	84,832,361 - 84,870,837 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	84,832,361 - 84,870,817 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	84,645,863 - 84,684,240 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	84,648,924 - 84,686,933 (-)	NCBI		MGSCv36	mm8
Celera	11	94,452,264 - 94,490,756 (-)	NCBI		Celera
Cytogenetic Map	11	C	NCBI
cM Map	11	51.34	NCBI

Ggnbp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	1,345,626 - 1,386,099 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	1,345,720 - 1,386,100 (-)	NCBI	ChiLan1.0	ChiLan1.0

GGNBP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	28,170,683 - 28,216,241 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	30,052,553 - 30,098,084 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	20,491,687 - 20,537,516 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	20,786,936 - 20,831,761 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	20,786,936 - 20,831,055 (-)	Ensembl	panpan1.1		panPan2

GGNBP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	36,430,194 - 36,463,248 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	36,442,652 - 36,463,200 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	35,656,210 - 35,689,394 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	37,239,385 - 37,273,056 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	37,240,094 - 37,273,045 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	36,021,874 - 36,055,530 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	36,308,821 - 36,342,264 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	36,397,065 - 36,430,249 (+)	NCBI		UU_Cfam_GSD_1.0

Ggnbp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	35,403,096 - 35,439,392 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	1,635,443 - 1,671,089 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	1,635,443 - 1,671,057 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GGNBP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	38,074,094 - 38,111,710 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	38,074,033 - 38,111,719 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	39,695,001 - 39,730,210 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GGNBP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	31,200,734 - 31,261,040 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	31,200,740 - 31,260,305 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	1,950,206 - 2,000,923 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ggnbp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624871	3,624,106 - 3,661,392 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624871	3,624,107 - 3,661,004 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ggnbp2
81 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	164
Count of miRNA genes:	125
Interacting mature miRNAs:	138
Transcripts:	ENSRNOT00000042506
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	50574707	95574707	Rat
1578779	Tcas10	Tongue tumor susceptibility QTL 10	3.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	10	31297439	76297439	Rat
631565	Hcuc4	Hepatic copper content QTL 4	4.15		liver copper amount (VT:0003065)	liver copper weight to liver dry weight ratio (CMO:0001512)	10	66941813	73452992	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	26521957	98003205	Rat
2293669	Bmd33	Bone mineral density QTL 33	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	10	49444551	81709989	Rat
152025224	Bw193	Body weight QTL 193	6.47		body mass (VT:0001259)		10	51663405	75085664	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	41142633	86142633	Rat
61449	Ciaa2	CIA Autoantibody QTL 2	7.1		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	10	63221094	107211142	Rat
631557	Bp136	Blood pressure QTL 136		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	30632053	75632053	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42045676	104670812	Rat
2293679	Bmd30	Bone mineral density QTL 30	3.5	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	49444551	81709989	Rat
1549831	Bss6	Bone structure and strength QTL 6	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	10	57576521	102576521	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	53797494	98952626	Rat
61463	Bp12	Blood pressure QTL 12	6.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	41333258	86333258	Rat
8694173	Bw149	Body weight QTL 149	4.38	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	10	44441699	89441699	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45029650	95600334	Rat
1554317	Bmd4	Bone mineral density QTL 4	9.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	19816042	99406971	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	53797385	107211142	Rat
724527	Bp148	Blood pressure QTL 148		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	28453136	73453136	Rat
2300171	Bmd58	Bone mineral density QTL 58	4.9	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	26944628	71944628	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14487011	89062041	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62057807	107057807	Rat
2293646	Bss25	Bone structure and strength QTL 25	10.96	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	10	69738412	107211142	Rat
2303118	Mamtr7	Mammary tumor resistance QTL 7		0.003	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	9658275	104670812	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	42323132	87323132	Rat
2300172	Bmd57	Bone mineral density QTL 57	9.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	10	69738412	107211142	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62057807	107057807	Rat
9589030	Epfw9	Epididymal fat weight QTL 9	19.24	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	10	44441699	89441699	Rat
1357344	Bp249	Blood pressure QTL 249		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	66743655	98003205	Rat
10402859	Bp381	Blood pressure QTL 381		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	27606468	72606468	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14487011	107057807	Rat
2293652	Bmd22	Bone mineral density QTL 22	4.9	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	49444551	81709989	Rat
70198	BpQTLcluster9	Blood pressure QTL cluster 9	2.94		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	42323132	87323132	Rat
2306970	Anxrr22	Anxiety related response QTL 22	5.95		fear/anxiety-related behavior trait (VT:1000241)	number of periods of voluntary immobility (CMO:0001045)	10	61345276	98211570	Rat
1359017	Hrtrt21	Heart rate QTL 21	2.4		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	10	51772940	96772940	Rat
2293663	Bss33	Bone structure and strength QTL 33	9.34	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	10	69738412	107211142	Rat
7387312	Bw125	Body weight QTL 125	3	0.0047	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight (CMO:0000356)	10	64890616	107211142	Rat
2312672	Insul15	Insulin level QTL 15		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	10	57134272	102134272	Rat
2317029	Aia19	Adjuvant induced arthritis QTL 19	2.98		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	10	66978955	107211142	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22427500	90627625	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6154182	73453136	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	51770177	107211142	Rat
2317039	Aia6	Adjuvant induced arthritis QTL 6	4.31		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	10	66978955	107211142	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1	80676123	Rat
2317043	Aia7	Adjuvant induced arthritis QTL 7	3.82		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	10	37565079	82565079	Rat
2317042	Aia20	Adjuvant induced arthritis QTL 20	3.38		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	10	37565079	82565079	Rat
2298481	Eau9	Experimental allergic uveoretinitis QTL 9		0.0169	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	65927233	82565079	Rat
61396	Bp9	Blood pressure QTL 9	4.8	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68420376	107211142	Rat
70363	Bp71	Blood pressure QTL 71		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	61345276	81714865	Rat
61402	Niddm3	Non-insulin dependent diabetes mellitus QTL 3	4.58		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	61345413	82564856	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29299504	107211142	Rat
70364	Bp72	Blood pressure QTL 72			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	51121100	96121100	Rat
10450498	Bp384	Blood pressure QTL 384		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	67750049	107211142	Rat
2293698	Bss43	Bone structure and strength QTL 43	5.33	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	10	59209888	104209888	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	51774612	95600334	Rat
2289985	Bp305	Blood pressure QTL 305			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	67502108	73579767	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	54809292	99809292	Rat
1558643	Cm44	Cardiac mass QTL 44	4.8	0.0000368	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	61345276	99703528	Rat
631535	Cm51	Cardiac mass QTL 51	3		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	10	51786282	91669536	Rat
1576319	Cia29	Collagen induced arthritis QTL 29			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	33973921	78973921	Rat
8552805	Bw145	Body weight QTL 145	2.2		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	10	41944526	78307017	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
2293705	Bmd25	Bone mineral density QTL 25	7.1	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	10	49444551	81709989	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40035094	102359817	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40035094	104060283	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14487011	104060283	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49444551	81709989	Rat
1576311	Pia26	Pristane induced arthritis QTL 26			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	31224026	75632053	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40035094	104060283	Rat
7411614	Foco18	Food consumption QTL 18		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	44441699	89441699	Rat
6893336	Cm75	Cardiac mass QTL 75	0.1	0.87	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	61345276	99703528	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47369470	92369470	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6357896	96121100	Rat
2312662	Slep8	Serum leptin concentration QTL 8		0.05	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	10	57134272	102134272	Rat
6893342	Cm78	Cardiac mass QTL 78	0.1	0.88	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	42876766	79813922	Rat
2292441	Bp308	Blood pressure QTL 308			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	27606468	72606468	Rat
1642980	Bp300	Blood pressure QTL 300			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68383129	107211142	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	26521957	98952741	Rat
2312668	Scl65	Serum cholesterol level QTL 65		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	57134272	102134272	Rat

Markers in Region

RH144692

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	69,741,369 - 69,741,560 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	72,186,818 - 72,187,008	NCBI	Rnor6.0
Rnor_5.0	10	72,093,677 - 72,093,867	UniSTS	Rnor5.0
RGSC_v3.4	10	73,144,681 - 73,144,871	UniSTS	RGSC3.4
Celera	10	68,669,400 - 68,669,590	UniSTS
Cytogenetic Map	10	q26	UniSTS

AW535289

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	69,712,914 - 69,713,065 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	72,158,117 - 72,158,267	NCBI	Rnor6.0
Rnor_5.0	10	72,064,976 - 72,065,126	UniSTS	Rnor5.0
RGSC_v3.4	10	73,116,226 - 73,116,376	UniSTS	RGSC3.4
Celera	10	68,640,869 - 68,641,019	UniSTS
Cytogenetic Map	10	q26	UniSTS

WI-16428

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	69,711,551 - 69,711,654 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	72,156,754 - 72,156,856	NCBI	Rnor6.0
Rnor_5.0	10	72,063,613 - 72,063,715	UniSTS	Rnor5.0
RGSC_v3.4	10	73,114,863 - 73,114,965	UniSTS	RGSC3.4
Celera	10	68,639,506 - 68,639,608	UniSTS
Cytogenetic Map	10	q26	UniSTS

Zfp403

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	69,712,038 - 69,713,398 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	72,157,241 - 72,158,600	NCBI	Rnor6.0
Rnor_5.0	10	72,064,100 - 72,065,459	UniSTS	Rnor5.0
RGSC_v3.4	10	73,115,350 - 73,116,709	UniSTS	RGSC3.4
Celera	10	68,639,993 - 68,641,352	UniSTS
Cytogenetic Map	10	q26	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001004273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY633742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000042506 ⟹ ENSRNOP00000049469

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	69,711,532 - 69,742,868 (-)	Ensembl
Rnor_6.0 Ensembl	10	72,156,730 - 72,188,308 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085728 ⟹ ENSRNOP00000073773

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	69,711,538 - 69,743,365 (-)	Ensembl
Rnor_6.0 Ensembl	10	72,156,728 - 72,188,164 (-)	Ensembl

RefSeq Acc Id:

NM_001004273 ⟹ NP_001004273

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,950 - 70,240,283 (-)	NCBI
mRatBN7.2	10	69,711,527 - 69,742,860 (-)	NCBI
Rnor_6.0	10	72,156,729 - 72,188,308 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI
RGSC_v3.4	10	73,114,838 - 73,146,171 (-)	RGD

Sequence:

show sequence

GGGCGCGTGTGGAATCGGGTGATGGGAAACGCAGCGCGGCTCTCCCGTCCTTCTTGCTCCGCGC
CCCCCCACCCCTTTCCCCCGTGGCGAATGTGCTGCGAGGTGGCGGGTGCTTACGCTCGCGGGGT
TTGGCTGTTGCAGGCAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGCGGCAG
CAGCGGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGCGACTG
GTGGCAGTGTGCAGGGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCTCTACA
TAGACGACACTCTCACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGGCATCA
GAATAATGGTGCACAACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAGATTTA
AGTATTGCCATGGTGGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTG
TTGGTTGTCGTCGCAGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCTGCCCT
TGAACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTGATGCA
AAAAAGCTTTATACATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGCTATTC
CAAAAAGTAAGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTTT
GGGAGGATGTTGGATGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTTTTA
ATTGACTCTAGTTGTCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCACTG
ATTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAAAGA
GAAGGGCTACTGTGCTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATACAT
GTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAG
GGCGACGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGCTTGGG
GATTCATCTTTATGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGACGTGG
CAGATGCTCTTTTATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGAAAAAG
TGCAGGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAGAGA
ACTCAAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGTGTGAT
AGTCCTGCTTCCTTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGACTTCA
TGGAAAATAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTAATTGT
TACCAATGAAAATACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTAAAATA
AAGAAAGGCATGTCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGAAGGAA
GTGAGACAGGTTCTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCATGATGA
ACATGGTGAAGATCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTTGTGTT
GAATGTTGGGCAAATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAAGAAAA
GCAAGATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAA
TCGAGAGACCTCAGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACAT
CCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAA
ACGTACCACAGTTCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGTGCCAA
GAGCTTAGTTGAACTTCTTGATGAGTCTGAATGTACTTCAGATGAGGAAATCTTTATCTCACAA
GATGAAATACAGTCATTTATGGCTAATAACCAGTCTTTCTACAGCAATAGAGAACAATACCGAC
AGCATCTGAAGGAGAAATTTAATAAATACTGCCGCTTAAATGACCACAAGAGGCCCGTTTGTAG
TGGCTGGCTGACAACGGCTGGAGCAAATTAAATAAATAAAATAGCTCTGTCTTTCAATGAAACA
CTCAAGATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTCTGGCAAAATTT
TACCTTAAATCTTAAATCAATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGT
TTGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTACGCAGGTCTGCCTATGATTTAAGC
CATCTCTTCATTAAACGTTTCTCCTTCCTGTGAGACTTACTAAAGCAACTTAGTGGCAAAAGTA
ATGTTGTACTTACACTTCTGTACAGAAATGACAGTGAGCTGGATATATGGTTTACAGTAGACAT
CCACTTGCAAAGCGTCTGGACAAAATGTTAAAGGCAATGTGCAAAATTTAAAATAAAGAGTATT
TATTAATACGCATAGTAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006247047 ⟹ XP_006247109

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,554 (-)	NCBI
mRatBN7.2	10	69,712,843 - 69,743,134 (-)	NCBI
Rnor_6.0	10	72,158,045 - 72,188,579 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

CAGCCTAGGGGCCACCCTGGGCGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCA
GGCATGGGCTGTGGAGCCGAGGCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGG
GATGTCCCGGGGCCAGCAGGCAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGG
CGGCAGCAGCGGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCG
CGACTGGTGGCAGTGTGCAGGGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCC
TCTACATAGACGACACTCTCACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGG
GCATCAGAATAATGGTGCACAACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAA
GATTTAAGTATTGCCATGGTGGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCC
CATGTGTTGGTTGTCGTCGCAGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCC
TGCCCTTGAACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACT
GATGCAAAAAAGCTTTATACATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATG
CTATTCCAAAAAGTAAGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAA
ACCTTTGGGTGAAGGGAGCAGTAGCAGTGTCAGTTCAGAGAAGTTAAGTACAGATAAGAGAAGT
AGTGAAGACCACAGGAAGGACAGCAAGTGTAGGATCATTTTCCATTATGGACCTTTCCAGGGAA
CAGCCAGAGGATGTTGGATGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGT
TTTAATTGACTCTAGTTGTCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGC
ACTGATTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCA
AAGAGAAGGGCTACTGTGCTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACAT
ACATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCA
GGAGGGTATGAGCGACGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCA
CTTGCTTGGGGATTCATCTTTATGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGA
GCAGACGTGGCAGATGCTCTTTTATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACT
GTGGAAAAAGTGCAGGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAAC
GAGTTAGAGAACTCAAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTG
TGTGTGTGATAGTCCTGCTTCCTTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAA
ACAGACTTCATGGAAAATAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAG
AAGTAATTGTTACCAATGAAAATACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTC
CCCTAAAATAAAGAAAGGCATGTCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGC
ATGGAAGGAAGTGAGACAGGTTCTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTA
ACCATGATGAACATGGTGAAGATCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGA
CAGTTGTGTTGAATGTTGGGCAAATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAG
AAAAAGAAAAGCAAGATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAG
ATCCAGGTAATCGAGAGACCTCAGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAA
AGATGCACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAG
CATAGGAAAAACGTACCACAGTTCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAA
AAGGTGCCAAGAGCTTAGTTGAACTTCTTGTAAGTAGTTCACCATATCTTACTGTGTATTGGGG
GAGATATTTGAAGGTTTCAGGTAGGAAACAGATGACTTTCTATTTTTCACTGATGACTTCTGTG
ACTTCTGGAGCACATTGTTTTATTTGTCTCAAAGTTCAGAGCATTGGGAGAGTAAGAAGTGGCA
TCATGTCTAGAAATCTGAGTTATTGTAAACAAAATTTATCCACGTGGCAGTTTAGTACTTACCT
TTCTAGATCGGGAAAGAATATTAAATAAGTATAATTTCAGTATCCCAAAGGAAGAGTGAGGAAA
GATTAACAGTTTGGCTCATGCTCAGCCACTTAAGAGTTTGAAGCCATCCTAGGATGAGACCCTG
TTTTAAACCTCCTATACTCCCTACTCCTAGAACAAAAACAATAAAAAAATACCTTGAACTAA

hide sequence

RefSeq Acc Id:

XM_006247048 ⟹ XP_006247110

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,554 (-)	NCBI
mRatBN7.2	10	69,712,843 - 69,743,134 (-)	NCBI
Rnor_6.0	10	72,158,045 - 72,188,578 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

AGCCTAGGGGCCACCCTGGGCGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCAG
GCATGGGCTGTGGAGCCGAGGCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGGG
ATGTCCCGGGGCCAGCAGGCAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGC
GGCAGCAGCGGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGC
GACTGGTGGCAGTGTGCAGGGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCT
CTACATAGACGACACTCTCACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGG
CATCAGAATAATGGTGCACAACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAG
ATTTAAGTATTGCCATGGTGGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCC
ATGTGTTGGTTGTCGTCGCAGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCT
GCCCTTGAACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTG
ATGCAAAAAAGCTTTATACATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGC
TATTCCAAAAAGTAAGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAA
CCTTTGGGTGAAGGGAGCAGTAGCAGTGTCAGTTCAGAGAAGTTAAGTACAGATAAGAGAAGTA
GTGAAGACCACAGGAAGGACAGCAAGTGTAGGATCATTTTCCATTATGGACCTTTCCAGGGAAC
AGCCAGAGGATGTTGGATGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTT
TTAATTGACTCTAGTTGTCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCA
CTGATTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAA
AGAGAAGGGCTACTGTGCTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATA
CATGTTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAG
GAGGGCGACGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGCTT
GGGGATTCATCTTTATGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGACG
TGGCAGATGCTCTTTTATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGAAA
AAGTGCAGGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAG
AGAACTCAAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGTGT
GATAGTCCTGCTTCCTTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGACT
TCATGGAAAATAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTAAT
TGTTACCAATGAAAATACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTAAA
ATAAAGAAAGGCATGTCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGAAG
GAAGTGAGACAGGTTCTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCATGA
TGAACATGGTGAAGATCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTTGT
GTTGAATGTTGGGCAAATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAAGA
AAAGCAAGATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGG
TAATCGAGAGACCTCAGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCA
CATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGA
AAAACGTACCACAGTTCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGTGC
CAAGAGCTTAGTTGAACTTCTTGTAAGTAGTTCACCATATCTTACTGTGTATTGGGGGAGATAT
TTGAAGGTTTCAGGTAGGAAACAGATGACTTTCTATTTTTCACTGATGACTTCTGTGACTTCTG
GAGCACATTGTTTTATTTGTCTCAAAGTTCAGAGCATTGGGAGAGTAAGAAGTGGCATCATGTC
TAGAAATCTGAGTTATTGTAAACAAAATTTATCCACGTGGCAGTTTAGTACTTACCTTTCTAGA
TCGGGAAAGAATATTAAATAAGTATAATTTCAGTATCCCAAAGGAAGAGTGAGGAAAGATTAAC
AGTTTGGCTCATGCTCAGCCACTTAAGAGTTTGAAGCCATCCTAGGATGAGACCCTGTTTTAAA
CCTCCTATACTCCCTACTCCTAGAACAAAAACAATAAAAAAATACCTTGAACTAA

hide sequence

RefSeq Acc Id:

XM_006247049 ⟹ XP_006247111

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,550 (-)	NCBI
mRatBN7.2	10	69,711,528 - 69,743,130 (-)	NCBI
Rnor_6.0	10	72,156,729 - 72,188,564 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

CCTGGGCGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCAGGCATGGGCTGTGGA
GCCGAGGCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGGGATGTCCCGGGGCCA
GCAGGCAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGCGGCAGCAGCGGCAG
CTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGCGACTGGTGGCAGTG
TGCAGGGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCTCTACATAGACGACA
CTCTCACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGGCATCAGAATAATGG
TGCACAACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAGATTTAAGTATTGCC
ATGGTGGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTC
GTCGCAGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCT
GACAGTAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTGATGCAAAAAAGCTT
TATACATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGCTATTCCAAAAAGTA
AGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTTTGGGTGAAGG
GAGCAGTAGCAGTGTCAGTTCAGAGAAGTTAAGTACAGATAAGAGAAGTAGTGAAGACCACAGG
AAGGACAGCAAGTGTAGGATCATTTTCCATTATGGACCTTTCCAGGGAACAGCCAGAGGATGTT
GGATGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTGACTCTAG
TTGTCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCACTGATTGCAAAAAT
AAAGTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAAAGAGAAGGGCTACT
GTGCTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATACATGTTTGCTGTGA
AACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGCGA
CGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGCTTGGGGATTC
ATCTTTATGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGACGTGGCAGAT
GCTCTTTTATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGAAAAAGTGCAG
GGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAGAGAACTCA
AGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGTGTGATAGTCC
TGCTTCCTTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGACTTCATGGAA
AATAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTAATTGTTACCA
ATGAAAATACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTAAAATAAAGAA
AGGCATGTCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGAAGGAAGTGAG
ACAGGTTCTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCATGATGAACATG
GTGAAGATCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTTGTGTTGAATG
TTGGGCAAATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAAGAAAAGCAAG
ATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAATCGAG
AGACCTCAGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTGA
GAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAACGTA
CCACAGTTCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGTGCCAAGAGCT
TAGTTGAACTTCTTGATGAGTCTGAATGTACTTCAGATGAGGAAATCTTTATCTCACAAGATGA
AATACAGTCATTTATGGCTAATAACCAGTCTTTCTACAGCAATAGAGAACAATACCGACAGCAT
CTGAAGGAGAAATTTAATAAATACTGCCGCTTAAATGACCACAAGAGGCCCGTTTGTAGTGGCT
GGCTGACAACGGCTGGAGCAAATTAAATAAATAAAATAGCTCTGTCTTTCAATGAAACACTCAA
GATGACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTCTGGCAAAATTTTACCT
TAAATCTTAAATCAATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTT
CTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTACGCAGGCCTGCCTATGATTTAAGCCATCT
CTTCATTAAACGTTTCTCTTCCTGTGAGACTTACTAAAGCAACTTAGTGGCAAAAGTAATGTTG
TACTTACACTTCTGTACAGAAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTT
GCAAAGCGTCTGGACAAAATGTTAAAGGCAATGTGCAAAATTTAAAATAAAGAGTATTTATTAA
TACGCATAGTA

hide sequence

RefSeq Acc Id:

XM_006247050 ⟹ XP_006247112

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,550 (-)	NCBI
mRatBN7.2	10	69,711,528 - 69,743,130 (-)	NCBI
Rnor_6.0	10	72,156,729 - 72,188,563 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

CTGGGCGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCAGGCATGGGCTGTGGAG
CCGAGGCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGGGATGTCCCGGGGCCAG
CAGGCAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGCGGCAGCAGCGGCAGC
TGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGCGACTGGTGGCAGTGT
GCAGGGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCTCTACATAGACGACAC
TCTCACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGGCATCAGAATAATGGT
GCACAACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAGATTTAAGTATTGCCA
TGGTGGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCG
TCGCAGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCTG
ACAGTAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTGATGCAAAAAAGCTTT
ATACATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGCTATTCCAAAAAGTAA
GAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTTTGGGTGAAGGG
AGCAGTAGCAGTGTCAGTTCAGAGAAGTTAAGTACAGATAAGAGAAGTAGTGAAGACCACAGGA
AGGACAGCAAGTGTAGGATCATTTTCCATTATGGACCTTTCCAGGGAACAGCCAGAGGATGTTG
GATGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTGACTCTAGT
TGTCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCACTGATTGCAAAAATA
AAGTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAAAGAGAAGGGCTACTG
TGCTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATACATGTTTGCTGTGAA
ACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGCGACGAGAAA
GACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGCTTGGGGATTCATCTTTA
TGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGACGTGGCAGATGCTCTTT
TATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGAAAAAGTGCAGGGTATTA
GCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAGAGAACTCAAGCAAGA
AAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGTGTGATAGTCCTGCTTCC
TTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGACTTCATGGAAAATAGCT
GCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTAATTGTTACCAATGAAAA
TACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTAAAATAAAGAAAGGCATG
TCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGAAGGAAGTGAGACAGGTT
CTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCATGATGAACATGGTGAAGA
TCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTTGTGTTGAATGTTGGGCA
AATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAAGAAAAGCAAGATGTTGA
AATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAATCGAGAGACCTC
AGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTGAGAGTTGT
TGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAACGTACCACAGT
TCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGA
ACTTCTTGATGAGTCTGAATGTACTTCAGATGAGGAAATCTTTATCTCACAAGATGAAATACAG
TCATTTATGGCTAATAACCAGTCTTTCTACAGCAATAGAGAACAATACCGACAGCATCTGAAGG
AGAAATTTAATAAATACTGCCGCTTAAATGACCACAAGAGGCCCGTTTGTAGTGGCTGGCTGAC
AACGGCTGGAGCAAATTAAATAAATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACT
ACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTCTGGCAAAATTTTACCTTAAATCT
TAAATCAATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTT
CAGGCTTGTGTCTTTAGTTGCGTGGCTACGCAGGCCTGCCTATGATTTAAGCCATCTCTTCATT
AAACGTTTCTCTTCCTGTGAGACTTACTAAAGCAACTTAGTGGCAAAAGTAATGTTGTACTTAC
ACTTCTGTACAGAAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGC
GTCTGGACAAAATGTTAAAGGCAATGTGCAAAATTTAAAATAAAGAGTATTTATTAATACGCAT
AGTA

hide sequence

RefSeq Acc Id:

XM_006247051 ⟹ XP_006247113

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,553 (-)	NCBI
mRatBN7.2	10	69,712,843 - 69,743,133 (-)	NCBI
Rnor_6.0	10	72,158,045 - 72,188,572 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

GGGGCCACCCTGGGCGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCAGGCATGG
GCTGTGGAGCCGAGGCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGGGATGTCC
CGGGGCCAGCAGGCAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGCGGCAGC
AGCGGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGCGACTGG
TGGCAGTGTGCAGGGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCTCTACAT
AGACGACACTCTCACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGGCATCAG
AATAATGGTGCACAACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAGATTTAA
GTATTGCCATGGTGGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGT
TGGTTGTCGTCGCAGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCTGCCCTT
GAACCCCTGACAGTAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTGATGCAA
AAAAGCTTTATACATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGCTATTCC
AAAAAGTAAGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTTTG
GGAGGATGTTGGATGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAA
TTGACTCTAGTTGTCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCACTGA
TTGCAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAAAGAG
AAGGGCTACTGTGCTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATACATG
TTTGCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGG
GTATGAGCGACGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGC
TTGGGGATTCATCTTTATGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGA
CGTGGCAGATGCTCTTTTATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGA
AAAAGTGCAGGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTT
AGAGAACTCAAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGT
GTGATAGTCCTGCTTCCTTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGA
CTTCATGGAAAATAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTA
ATTGTTACCAATGAAAATACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTA
AAATAAAGAAAGGCATGTCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGA
AGGAAGTGAGACAGGTTCTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCAT
GATGAACATGGTGAAGATCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTT
GTGTTGAATGTTGGGCAAATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAA
GAAAAGCAAGATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCA
GGTAATCGAGAGACCTCAGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATG
CACATCCTGAGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAG
GAAAAACGTACCACAGTTCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGT
GCCAAGAGCTTAGTTGAACTTCTTGTAAGTAGTTCACCATATCTTACTGTGTATTGGGGGAGAT
ATTTGAAGGTTTCAGGTAGGAAACAGATGACTTTCTATTTTTCACTGATGACTTCTGTGACTTC
TGGAGCACATTGTTTTATTTGTCTCAAAGTTCAGAGCATTGGGAGAGTAAGAAGTGGCATCATG
TCTAGAAATCTGAGTTATTGTAAACAAAATTTATCCACGTGGCAGTTTAGTACTTACCTTTCTA
GATCGGGAAAGAATATTAAATAAGTATAATTTCAGTATCCCAAAGGAAGAGTGAGGAAAGATTA
ACAGTTTGGCTCATGCTCAGCCACTTAAGAGTTTGAAGCCATCCTAGGATGAGACCCTGTTTTA
AACCTCCTATACTCCCTACTCCTAGAACAAAAACAATAAAAAAATACCTTGAACTAA

hide sequence

RefSeq Acc Id:

XM_006247052 ⟹ XP_006247114

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,553 (-)	NCBI
mRatBN7.2	10	69,712,843 - 69,743,133 (-)	NCBI
Rnor_6.0	10	72,158,045 - 72,188,569 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

GCCACCCTGGGCGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCAGGCATGGGCT
GTGGAGCCGAGGCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGGGATGTCCCGG
GGCCAGCAGGCAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGCGGCAGCAGC
GGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGCGACTGGTGG
CAGTGTGCAGGGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCTCTACATAGA
CGACACTCTCACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGGCATCAGAAT
AATGGTGCACAACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAGATTTAAGTA
TTGCCATGGTGGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGG
TTGTCGTCGCAGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCTGCCCTTGAA
CCCCTGACAGTAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTGATGCAAAAA
AGCTTTATACATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGCTATTCCAAA
AAGTAAGAAGAACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTTTGGGA
GGATGTTGGATGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTG
ACTCTAGTTGTCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCACTGATTG
CAAAAATAAAGTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAAAGAGAAG
GGCTACTGTGCTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATACATGTTT
GCTGTGAAACAGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGCG
ACGAGAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGCTTGGGGATT
CATCTTTATGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGACGTGGCAGA
TGCTCTTTTATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGAAAAAGTGCA
GGGTATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAGAGAACTC
AAGCAAGAAAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGTGTGATAGTC
CTGCTTCCTTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGACTTCATGGA
AAATAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTAATTGTTACC
AATGAAAATACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTAAAATAAAGA
AAGGCATGTCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGAAGGAAGTGA
GACAGGTTCTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCATGATGAACAT
GGTGAAGATCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTTGTGTTGAAT
GTTGGGCAAATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAAGAAAAGCAA
GATGTTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAATCGA
GAGACCTCAGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTG
AGAGTTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAACGT
ACCACAGTTCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGTGCCAAGAGC
TTAGTTGAACTTCTTGTAAGTAGTTCACCATATCTTACTGTGTATTGGGGGAGATATTTGAAGG
TTTCAGGTAGGAAACAGATGACTTTCTATTTTTCACTGATGACTTCTGTGACTTCTGGAGCACA
TTGTTTTATTTGTCTCAAAGTTCAGAGCATTGGGAGAGTAAGAAGTGGCATCATGTCTAGAAAT
CTGAGTTATTGTAAACAAAATTTATCCACGTGGCAGTTTAGTACTTACCTTTCTAGATCGGGAA
AGAATATTAAATAAGTATAATTTCAGTATCCCAAAGGAAGAGTGAGGAAAGATTAACAGTTTGG
CTCATGCTCAGCCACTTAAGAGTTTGAAGCCATCCTAGGATGAGACCCTGTTTTAAACCTCCTA
TACTCCCTACTCCTAGAACAAAAACAATAAAAAAATACCTTGAACTAA

hide sequence

RefSeq Acc Id:

XM_006247053 ⟹ XP_006247115

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,549 (-)	NCBI
mRatBN7.2	10	69,711,528 - 69,743,129 (-)	NCBI
Rnor_6.0	10	72,156,729 - 72,188,559 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

GCGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCAGGCATGGGCTGTGGAGCCGA
GGCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGGGATGTCCCGGGGCCAGCAGG
CAGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGCGGCAGCAGCGGCAGCTGGG
AGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGCGACTGGTGGCAGTGTGCAG
GGACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCTCTACATAGACGACACTCTC
ACGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGGCATCAGAATAATGGTGCAC
AACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAGATTTAAGTATTGCCATGGT
GGTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGTCGC
AGTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCTGACAG
TAGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTGATGCAAAAAAGCTTTATAC
ATTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGCTATTCCAAAAAGTAAGAAG
AACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTTTGGGAGGATGTTGGA
TGGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTGACTCTAGTTG
TCTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCACTGATTGCAAAAATAAA
GTCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAAAGAGAAGGGCTACTGTG
CTGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATACATGTTTGCTGTGAAAC
AGACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGCGACGA
GAAAGACATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGCTTGGGGATTCATC
TTTATGAACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGACGTGGCAGATGCT
CTTTTATCTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGAAAAAGTGCAGGGT
ATTAGCCGCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAGAGAACTCAAGC
AAGAAAAGAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGTGTGATAGTCCTGC
TTCCTTACACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGACTTCATGGAAAAT
AGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTAATTGTTACCAATG
AAAATACATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTAAAATAAAGAAAGG
CATGTCTCCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGAAGGAAGTGAGACA
GGTTCTCGGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCATGATGAACATGGTG
AAGATCCCTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTTGTGTTGAATGTTG
GGCAAATTCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAAGAAAAGCAAGATG
TTGAAATGCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAATCGAGAGA
CCTCAGGAAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTGAGAG
TTGTTGCAGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAACGTACCA
CAGTTCACAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGTGCCAAGAGCTTAG
TTGAACTTCTTGATGAGTCTGAATGTACTTCAGATGAGGAAATCTTTATCTCACAAGATGAAAT
ACAGTCATTTATGGCTAATAACCAGTCTTTCTACAGCAATAGAGAACAATACCGACAGCATCTG
AAGGAGAAATTTAATAAATACTGCCGCTTAAATGACCACAAGAGGCCCGTTTGTAGTGGCTGGC
TGACAACGGCTGGAGCAAATTAAATAAATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGAT
GACTACTGCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTCTGGCAAAATTTTACCTTAA
ATCTTAAATCAATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTT
TCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTACGCAGGCCTGCCTATGATTTAAGCCATCTCTT
CATTAAACGTTTCTCTTCCTGTGAGACTTACTAAAGCAACTTAGTGGCAAAAGTAATGTTGTAC
TTACACTTCTGTACAGAAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCA
AAGCGTCTGGACAAAATGTTAAAGGCAATGTGCAAAATTTAAAATAAAGAGTATTTATTAATAC
GCATAGTA

hide sequence

RefSeq Acc Id:

XM_006247054 ⟹ XP_006247116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	70,208,955 - 70,240,548 (-)	NCBI
mRatBN7.2	10	69,711,528 - 69,743,129 (-)	NCBI
Rnor_6.0	10	72,156,729 - 72,188,558 (-)	NCBI
Rnor_5.0	10	72,063,588 - 72,095,410 (-)	NCBI

Sequence:

show sequence

CGGGGCGCTCCGACCGGGGAGAAGGGGTCAGCGGCGGGCACCAGGCATGGGCTGTGGAGCCGAG
GCGGGGATGGGCTCCTGGAGCCCGGACTCCCGAGCCGGGCGGGGATGTCCCGGGGCCAGCAGGC
AGGAGCTGGGAGGAGGCAGCAGCGGCAGGAGCAGCAGCGGCGGCGGCAGCAGCGGCAGCTGGGA
GGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGAACGATGGCGCGACTGGTGGCAGTGTGCAGG
GACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCTCTACATAGACGACACTCTCA
CGATGGTGATGGAATTTCCTGACAATGTTTTAAATCTTGATGGGCATCAGAATAATGGTGCACA
ACTAAAGCAGTTTATTCAGCGACATAGTATGCTTAAGCAACAAGATTTAAGTATTGCCATGGTG
GTAACATCACGTGAAGTCTTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGTCGCA
GTGTGGAACGCCTCTTTTCTCAGCTTGTAGAGTCTGGAAATCCTGCCCTTGAACCCCTGACAGT
AGGGCCCAAGGGAGTACTATCTTTGACTCGAAGCTGCATGACTGATGCAAAAAAGCTTTATACA
TTATTTTATGTACATGGGTCCAAACTAAATGATATGATAGATGCTATTCCAAAAAGTAAGAAGA
ACAAGAGATGTCAGTTACACTCTTTAGATACACACAAACCTAAACCTTTGGGAGGATGTTGGAT
GGATGTTTGGGAACTAATGTCCCAGGAATGCAGGGATGAAGTAGTTTTAATTGACTCTAGTTGT
CTTTTAGAAACACTAGAAACGTATCTTCGAAAGCACAGGTTTTGCACTGATTGCAAAAATAAAG
TCCTCCGAGCATACAATATCCTCATTGGCGAACTTGACTGCAGCAAAGAGAAGGGCTACTGTGC
TGCCCTTTATGAAGGCTTGCGGTGCTGTCCGCATGAGCGACACATACATGTTTGCTGTGAAACA
GACTTCATTGCACATCTCTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGCGACGAGAAAGAC
ATGCTAAGACAATAGATATAGCTCAAGAAGAGGTTCTCACTTGCTTGGGGATTCATCTTTATGA
ACGACTGCATCGAATCTGGCAAAAACTACGGGCGGAAGAGCAGACGTGGCAGATGCTCTTTTAT
CTTGGTGTTGATGCTTTACGTAAGAGCTTTGAAATGACTGTGGAAAAAGTGCAGGGTATTAGCC
GCTTGGAACAACTTTGTGAGGAATTTTCAGAGGAAGAACGAGTTAGAGAACTCAAGCAAGAAAA
GAAACGCCAAAAACGGAAGAACAGACGAAAAAATAAGTGTGTGTGTGATAGTCCTGCTTCCTTA
CACACAGCAGATGAGAAAGCAGTAAGCCAAGAAAAGGAAACAGACTTCATGGAAAATAGCTGCA
AAGCCTGTGGCAGCACTGAAGATGGTAATACTTGTGTAGAAGTAATTGTTACCAATGAAAATAC
ATCATGTACTTGTCCTAGCAGTGGCAATCTTTTGGGGTCCCCTAAAATAAAGAAAGGCATGTCT
CCACACTGTAACGGCAGTGATTGTGGATATTCATCTAGCATGGAAGGAAGTGAGACAGGTTCTC
GGGAAGGTTCAGATGTTGCCTGCACCGAGGGGATTTGTAACCATGATGAACATGGTGAAGATCC
CTGTGTCCATCACTGTGAAGACAAAGAAGATGATGGTGACAGTTGTGTTGAATGTTGGGCAAAT
TCTGAAGAAAATAACACAAAAGGAAAAAATAAAAAGAAGAAAAAGAAAAGCAAGATGTTGAAAT
GCGATGAACATATCCAAAAACTTGGAAGCTGTATTACAGATCCAGGTAATCGAGAGACCTCAGG
AAACACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATGCACATCCTGAGAGTTGTTGC
AGCACTGAGAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAACGTACCACAGTTCA
CAGAACCTACAGAAATGTCATTTGGTCCTGACTCTGGAAAAGGTGCCAAGAGCTTAGTTGAACT
TCTTGATGAGTCTGAATGTACTTCAGATGAGGAAATCTTTATCTCACAAGATGAAATACAGTCA
TTTATGGCTAATAACCAGTCTTTCTACAGCAATAGAGAACAATACCGACAGCATCTGAAGGAGA
AATTTAATAAATACTGCCGCTTAAATGACCACAAGAGGCCCGTTTGTAGTGGCTGGCTGACAAC
GGCTGGAGCAAATTAAATAAATAAAATAGCTCTGTCTTTCAATGAAACACTCAAGATGACTACT
GCGCCTTCTCTTTTAAAAACTCCTAATTTAGTGACTTCTGGCAAAATTTTACCTTAAATCTTAA
ATCAATGTGATTCCTTGTTTTGGGAGACGGTGGAGGTAACCTCATTCGTTTGTTCTTTCTTCAG
GCTTGTGTCTTTAGTTGCGTGGCTACGCAGGCCTGCCTATGATTTAAGCCATCTCTTCATTAAA
CGTTTCTCTTCCTGTGAGACTTACTAAAGCAACTTAGTGGCAAAAGTAATGTTGTACTTACACT
TCTGTACAGAAATGACAGTGAGCTGGATATATGGTTTACAGTAGACATCCACTTGCAAAGCGTC
TGGACAAAATGTTAAAGGCAATGTGCAAAATTTAAAATAAAGAGTATTTATTAATACGCATAGT
A

hide sequence

Protein Sequences


Protein RefSeqs	NP_001004273	(Get FASTA)	NCBI Sequence Viewer
	XP_006247109	(Get FASTA)	NCBI Sequence Viewer
	XP_006247110	(Get FASTA)	NCBI Sequence Viewer
	XP_006247111	(Get FASTA)	NCBI Sequence Viewer
	XP_006247112	(Get FASTA)	NCBI Sequence Viewer
	XP_006247113	(Get FASTA)	NCBI Sequence Viewer
	XP_006247114	(Get FASTA)	NCBI Sequence Viewer
	XP_006247115	(Get FASTA)	NCBI Sequence Viewer
	XP_006247116	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAT47121	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000049469.4
	ENSRNOP00000073773.2
GenBank Protein	Q6GVH5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001004273 ⟸ NM_001004273

- UniProtKB:

Q6GVH5 (UniProtKB/Swiss-Prot), A0A8L2QPK6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MARLVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLK
QQDLSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSC
MTDAKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGGCWMDVWELMSQECRD
EVVLIDSSCLLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHE
RHIHVCCETDFIAHLLGRAEPEFAGGRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAE
EQTWQMLFYLGVDALRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNK
CVCDSPASLHTADEKAVSQEKETDFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLG
SPKIKKGMSPHCNGSDCGYSSSMEGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDG
DSCVECWANSEENNTKGKNKKKKKKSKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKT
KDAHPESCCSTEKGGQPLPWFEHRKNVPQFTEPTEMSFGPDSGKGAKSLVELLDESECTSDEEI
FISQDEIQSFMANNQSFYSNREQYRQHLKEKFNKYCRLNDHKRPVCSGWLTTAGAN

hide sequence

RefSeq Acc Id:	XP_006247111 ⟸ XM_006247049
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K6D9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGEGSSSSVSSEKLSTDKRSS EDHRKDSKCRIIFHYGPFQGTARGCWMDVWELMSQECRDEVVLIDSSCLLETLETYLRKHRFCT DCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAG GYERRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMTV EKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVCDSPASLHTADEKAVSQEKET DFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGSPKIKKGMSPHCNGSDCGYSSSM EGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGDSCVECWANSEENNTKGKNKKKK KKSKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTKDAHPESCCSTEKGGQPLPWFEH RKNVPQFTEPTEMSFGPDSGKGAKSLVELLDESECTSDEEIFISQDEIQSFMANNQSFYSNREQ YRQHLKEKFNKYCRLNDHKRPVCSGWLTTAGAN hide sequence

RefSeq Acc Id:	XP_006247112 ⟸ XM_006247050
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K6D9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGEGSSSSVSSEKLSTDKRSS EDHRKDSKCRIIFHYGPFQGTARGCWMDVWELMSQECRDEVVLIDSSCLLETLETYLRKHRFCT DCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAG GRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMTVEK VQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVCDSPASLHTADEKAVSQEKETDF MENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGSPKIKKGMSPHCNGSDCGYSSSMEG SETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGDSCVECWANSEENNTKGKNKKKKKK SKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTKDAHPESCCSTEKGGQPLPWFEHRK NVPQFTEPTEMSFGPDSGKGAKSLVELLDESECTSDEEIFISQDEIQSFMANNQSFYSNREQYR QHLKEKFNKYCRLNDHKRPVCSGWLTTAGAN hide sequence

RefSeq Acc Id:	XP_006247115 ⟸ XM_006247053
- Peptide Label:	isoform X7
- UniProtKB:	A0A8L2QPK6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGGCWMDVWELMSQECRDEVV LIDSSCLLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHI HVCCETDFIAHLLGRAEPEFAGGYERRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEE QTWQMLFYLGVDALRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKC VCDSPASLHTADEKAVSQEKETDFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGS PKIKKGMSPHCNGSDCGYSSSMEGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGD SCVECWANSEENNTKGKNKKKKKKSKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTK DAHPESCCSTEKGGQPLPWFEHRKNVPQFTEPTEMSFGPDSGKGAKSLVELLDESECTSDEEIF ISQDEIQSFMANNQSFYSNREQYRQHLKEKFNKYCRLNDHKRPVCSGWLTTAGAN hide sequence

RefSeq Acc Id:	XP_006247116 ⟸ XM_006247054
- Peptide Label:	isoform X8
- UniProtKB:	A0A8L2QPK6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGGCWMDVWELMSQECRDEVV LIDSSCLLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHI HVCCETDFIAHLLGRAEPEFAGGRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQT WQMLFYLGVDALRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVC DSPASLHTADEKAVSQEKETDFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGSPK IKKGMSPHCNGSDCGYSSSMEGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGDSC VECWANSEENNTKGKNKKKKKKSKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTKDA HPESCCSTEKGGQPLPWFEHRKNVPQFTEPTEMSFGPDSGKGAKSLVELLDESECTSDEEIFIS QDEIQSFMANNQSFYSNREQYRQHLKEKFNKYCRLNDHKRPVCSGWLTTAGAN hide sequence

RefSeq Acc Id:	XP_006247109 ⟸ XM_006247047
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K6D9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGEGSSSSVSSEKLSTDKRSS EDHRKDSKCRIIFHYGPFQGTARGCWMDVWELMSQECRDEVVLIDSSCLLETLETYLRKHRFCT DCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAG GYERRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMTV EKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVCDSPASLHTADEKAVSQEKET DFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGSPKIKKGMSPHCNGSDCGYSSSM EGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGDSCVECWANSEENNTKGKNKKKK KKSKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTKDAHPESCCSTEKGGQPLPWFEH RKNVPQFTEPTEMSFGPDSGKGAKSLVELLVSSSPYLTVYWGRYLKVSGRKQMTFYFSLMTSVT SGAHCFICLKVQSIGRVRSGIMSRNLSYCKQNLSTWQFSTYLSRSGKNIK hide sequence

RefSeq Acc Id:	XP_006247110 ⟸ XM_006247048
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K6D9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGEGSSSSVSSEKLSTDKRSS EDHRKDSKCRIIFHYGPFQGTARGCWMDVWELMSQECRDEVVLIDSSCLLETLETYLRKHRFCT DCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAG GRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMTVEK VQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVCDSPASLHTADEKAVSQEKETDF MENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGSPKIKKGMSPHCNGSDCGYSSSMEG SETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGDSCVECWANSEENNTKGKNKKKKKK SKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTKDAHPESCCSTEKGGQPLPWFEHRK NVPQFTEPTEMSFGPDSGKGAKSLVELLVSSSPYLTVYWGRYLKVSGRKQMTFYFSLMTSVTSG AHCFICLKVQSIGRVRSGIMSRNLSYCKQNLSTWQFSTYLSRSGKNIK hide sequence

RefSeq Acc Id:	XP_006247113 ⟸ XM_006247051
- Peptide Label:	isoform X5
- UniProtKB:	A0A8L2QPK6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGGCWMDVWELMSQECRDEVV LIDSSCLLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHI HVCCETDFIAHLLGRAEPEFAGGYERRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEE QTWQMLFYLGVDALRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKC VCDSPASLHTADEKAVSQEKETDFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGS PKIKKGMSPHCNGSDCGYSSSMEGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGD SCVECWANSEENNTKGKNKKKKKKSKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTK DAHPESCCSTEKGGQPLPWFEHRKNVPQFTEPTEMSFGPDSGKGAKSLVELLVSSSPYLTVYWG RYLKVSGRKQMTFYFSLMTSVTSGAHCFICLKVQSIGRVRSGIMSRNLSYCKQNLSTWQFSTYL SRSGKNIK hide sequence

RefSeq Acc Id:	XP_006247114 ⟸ XM_006247052
- Peptide Label:	isoform X6
- UniProtKB:	A0A8L2QPK6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGCGAEAGMGSWSPDSRAGRGCPGASRQELGGGSSGRSSSGGGSSGSWEEVVTVATAASGTMAR LVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHSMLKQQD LSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSLTRSCMTD AKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGGCWMDVWELMSQECRDEVV LIDSSCLLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHI HVCCETDFIAHLLGRAEPEFAGGRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQT WQMLFYLGVDALRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVC DSPASLHTADEKAVSQEKETDFMENSCKACGSTEDGNTCVEVIVTNENTSCTCPSSGNLLGSPK IKKGMSPHCNGSDCGYSSSMEGSETGSREGSDVACTEGICNHDEHGEDPCVHHCEDKEDDGDSC VECWANSEENNTKGKNKKKKKKSKMLKCDEHIQKLGSCITDPGNRETSGNTMHTVFHRDKTKDA HPESCCSTEKGGQPLPWFEHRKNVPQFTEPTEMSFGPDSGKGAKSLVELLVSSSPYLTVYWGRY LKVSGRKQMTFYFSLMTSVTSGAHCFICLKVQSIGRVRSGIMSRNLSYCKQNLSTWQFSTYLSR SGKNIK hide sequence

Ensembl Acc Id:

ENSRNOP00000049469 ⟸ ENSRNOT00000042506

Ensembl Acc Id:

ENSRNOP00000073773 ⟸ ENSRNOT00000085728

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6GVH5-F1-model_v2	AlphaFold	Q6GVH5	1-696	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697555

Promoter ID:

EPDNEW_R8078

Type:

initiation region

Name:

Ggnbp2_1

Description:

gametogenetin binding protein 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	72,188,235 - 72,188,295	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1302978	AgrOrtholog
BioCyc Gene	G2FUF-23834	BioCyc
Ensembl Genes	ENSRNOG00000027860	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000042506.4	UniProtKB/TrEMBL
	ENSRNOT00000085728.2	UniProtKB/TrEMBL
InterPro	GGNBP2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:360584	UniProtKB/Swiss-Prot
NCBI Gene	360584	ENTREZGENE
PANTHER	GAMETOGENETIN-BINDING PROTEIN 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR13601	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Ggnbp2	PhenoGen
RatGTEx	ENSRNOG00000027860	RatGTEx
UniProt	A0A0G2K6D9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QPK6	ENTREZGENE, UniProtKB/TrEMBL
	GGNB2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-04	Ggnbp2	gametogenetin binding protein 2	Zfp403	zinc finger protein 403	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-11-17	Zfp403	zinc finger protein 403			Symbol updated	1299863	APPROVED
2005-02-14	Znf403	zinc finger protein 403			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar