Grm2 (glutamate metabotropic receptor 2) - Rat Genome Database

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Gene: Grm2 (glutamate metabotropic receptor 2) Rattus norvegicus
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Symbol: Grm2
Name: glutamate metabotropic receptor 2
RGD ID: 2743
Description: Enables group II metabotropic glutamate receptor activity and scaffold protein binding activity. Involved in several processes, including behavioral response to nicotine; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; and regulation of amine transport. Located in astrocyte projection and axon. Is active in presynaptic membrane. Used to study heroin dependence. Biomarker of schizophrenia. Orthologous to human GRM2 (glutamate metabotropic receptor 2); PARTICIPATES IN glutamate signaling pathway; INTERACTS WITH (+)-pilocarpine; (S)-nicotine; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: glutamate receptor, metabotropic 2; metabotropic glutamate receptor 2; mGlu2; mGluR2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Grm2em1  
Genetic Models: WI-Grm2em1
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88116,158,810 - 116,171,857 (-)NCBIGRCr8
mRatBN7.28107,280,099 - 107,293,159 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,280,099 - 107,293,146 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8112,903,031 - 112,916,129 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08111,102,213 - 111,115,309 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,944,991 - 108,958,085 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,344,999 - 115,358,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,344,999 - 115,358,046 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,705,123 - 114,718,193 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,837,086 - 111,850,133 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18111,857,819 - 111,869,581 (-)NCBI
Celera8106,592,051 - 106,605,096 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Original Reference(s)
Grm2RatBinge Drinking  IEP 405100715associated with human immunodeficiency virus infectious disease more ...RGD 
Grm2RatCocaine-Related Disorders  IMP 38501064knockout compared to wild typeRGD 
Grm2Ratheroin dependence  IMP 38501063 RGD 
Grm2Ratschizophrenia  IEP 401901203mRNA:decreased expression:prefrontal cortex and striatumRGD 
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Original Reference(s)
Grm2Ratamphetamine abuse  ISOGRM2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20211215
Grm2Ratschizophrenia  ISOGRM2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18923069
Grm2Ratsubstance-induced psychosis  ISOGRM2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20211215
Grm2Rattemporal lobe epilepsy  ISOGRM2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18804094

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Original Reference(s)
Grm2Rat(+)-pilocarpine decreases expressionEXP 6480464Pilocarpine results in decreased expression of GRM2 mRNA and Pilocarpine results in decreased expression of GRM2 proteinCTDPMID:16793029 more ...
Grm2Rat(S)-nicotine affects expressionEXP 6480464Nicotine affects the expression of GRM2 mRNACTDPMID:28339662
Grm2Rat17beta-estradiol increases activityEXP 6480464Estradiol results in increased activity of GRM2 proteinCTDPMID:15901789
Grm2Rat2,3',4,4',5-Pentachlorobiphenyl increases expressionISOGrm2 (Mus musculus)64804642 more ...CTDPMID:31388691
Grm2Rat2,3,7,8-tetrachlorodibenzodioxine increases methylationISOGrm2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased methylation of GRM2 geneCTDPMID:21212295
Grm2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of GRM2 mRNACTDPMID:33387578
Grm2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of GRM2 mRNACTDPMID:32109520
Grm2Rat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642 more ...CTDPMID:32109520
Grm2Rat4,4'-sulfonyldiphenol decreases expressionISOGrm2 (Mus musculus)6480464bisphenol S results in decreased expression of GRM2 mRNACTDPMID:30951980
Grm2Rat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of GRM2 mRNACTDPMID:36041667
Grm2Rat4-amino-2,6-dinitrotoluene affects expressionEXP 64804644-amino-2 and 6-dinitrotoluene affects the expression of GRM2 mRNACTDPMID:21346803
Grm2Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of GRM2 mRNACTDPMID:24780913
Grm2Ratacrylamide decreases expressionISOGRM2 (Homo sapiens)6480464Acrylamide results in decreased expression of GRM2 mRNACTDPMID:32763439
Grm2Rataflatoxin B1 decreases expressionISOGRM2 (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of GRM2 mRNACTDPMID:22100608
Grm2Ratamiodarone increases expressionISOGRM2 (Homo sapiens)6480464Amiodarone results in increased expression of GRM2 mRNACTDPMID:19774075
Grm2Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of GRM2 mRNACTDPMID:16483693
Grm2Rataristolochic acid A increases expressionISOGRM2 (Homo sapiens)6480464aristolochic acid I results in increased expression of GRM2 mRNACTDPMID:33212167
Grm2Ratarsane affects methylationISOGRM2 (Homo sapiens)6480464Arsenic affects the methylation of GRM2 geneCTDPMID:25304211
Grm2Ratarsenic atom affects methylationISOGRM2 (Homo sapiens)6480464Arsenic affects the methylation of GRM2 geneCTDPMID:25304211
Grm2Ratbenzo[a]pyrene increases methylationISOGRM2 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of GRM2 3' UTR more ...CTDPMID:27901495

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Biological Process
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Original Reference(s)
Grm2Ratadenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway involved_inIEAGO:00016411600115GO_REF:0000108GOCGO_REF:0000108
Grm2Ratbehavioral response to nicotine  IMP 38501064 RGD 
Grm2Ratcell communication involved_inIEAARBA:ARBA000289451600115GO_REF:0000117UniProtGO_REF:0000117
Grm2Ratcellular response to stress acts_upstream_of_or_withinISOGrm2 (Mus musculus)1624291 PMID:29024663RGDPMID:29024663
Grm2Ratcellular response to stress acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2RatG protein-coupled glutamate receptor signaling pathway involved_inIBAFB:FBgn0019985 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Grm2RatG protein-coupled glutamate receptor signaling pathway involved_inISOGRM2 (Homo sapiens)1624291 PMID:37286794RGDPMID:37286794
Grm2RatG protein-coupled glutamate receptor signaling pathway involved_inIEAUniProtKB:Q14416 and ensembl:ENSP000003784921600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2RatG protein-coupled receptor signaling pathway involved_inIEAUniProtKB-KW:KW-02971600115GO_REF:0000043UniProtGO_REF:0000043
Grm2RatG protein-coupled receptor signaling pathway involved_inIEAInterPro:IPR000162 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Grm2RatG protein-coupled receptor signaling pathway involved_inIEAInterPro:IPR000162 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Grm2Ratgene expression acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratgene expression acts_upstream_of_or_withinISOGrm2 (Mus musculus)1624291MGI:1857988 PMID:18720515RGDPMID:18720515
Grm2Ratglutamate receptor signaling pathway involved_inIMP 21201273PMID:28392297ARUK-UCL 
Grm2Ratglutamate secretion involved_inIDA 8553886PMID:15993439UniProt 
Grm2Ratintracellular glutamate homeostasis acts_upstream_of_or_withinISOGrm2 (Mus musculus)1624291MGI:1347355 PMID:29024663RGDPMID:29024663
Grm2Ratintracellular glutamate homeostasis acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratlong-term synaptic depression acts_upstream_of_or_withinISOGrm2 (Mus musculus)1624291MGI:1857988 PMID:8662555RGDPMID:8662555
Grm2Ratlong-term synaptic depression acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratpositive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inIMPUniProtKB:Q8SQG921201273PMID:28392297ARUK-UCL 
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Cellular Component
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Grm2Ratastrocyte projection located_inIDA 21201273PMID:28392297ARUK-UCL 
Grm2Rataxon located_inIDA 8553886PMID:15993439UniProt 
Grm2Rataxon located_inIDA 21201273PMID:28392297ARUK-UCL 
Grm2Ratcell projection located_inIEAUniProtKB-KW:KW-09661600115GO_REF:0000043UniProtGO_REF:0000043
Grm2Ratdendrite located_inIEAUniProtKB-SubCell:SL-02831600115GO_REF:0000044UniProtGO_REF:0000044
Grm2Ratglutamatergic synapse is_active_inIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratglutamatergic synapse is_active_inISOGrm2 (Mus musculus)1624291 PMID:31735403RGDPMID:31735403
Grm2Ratmembrane located_inIEAInterPro:IPR000162 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Grm2Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Grm2Ratneuron projection located_inISOGrm2 (Mus musculus)1624291 PMID:12074840RGDPMID:12074840
Grm2Ratneuron projection located_inIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratplasma membrane is_active_inIBAFB:FBgn0000206 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Grm2Ratplasma membrane is_active_inISOGRM2 (Homo sapiens)1624291 PMID:12011465RGDPMID:12011465
Grm2Ratplasma membrane is_active_inIEAUniProtKB:Q14416 and ensembl:ENSP000003784921600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratplasma membrane located_inTAS 8553886PMID:15993439UniProt 
Grm2Ratplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044
Grm2Ratplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
Grm2Ratpostsynaptic membrane is_active_inISOGrm2 (Mus musculus)1624291 PMID:33082287RGDPMID:33082287
Grm2Ratpostsynaptic membrane is_active_inIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratpresynaptic membrane is_active_inIDA 405650215PMID:35511883SynGO 
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Molecular Function
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Original Reference(s)
Grm2Ratcalcium channel regulator activity enablesIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratcalcium channel regulator activity enablesISOGrm2 (Mus musculus)1624291 PMID:11584003 and PMID:7965099RGDPMID:11584003 and PMID:7965099
Grm2RatG protein-coupled receptor activity enablesIEAUniProtKB-KW:KW-02971600115GO_REF:0000043UniProtGO_REF:0000043
Grm2RatG protein-coupled receptor activity enablesIEAInterPro:IPR000337 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Grm2RatG protein-coupled receptor activity enablesIEAInterPro:IPR000337 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Grm2Ratglutamate receptor activity enablesIEAUniProtKB:Q14416 and ensembl:ENSP000003784921600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratglutamate receptor activity enablesISOGRM2 (Homo sapiens)1624291 PMID:37286794RGDPMID:37286794
Grm2Ratgroup II metabotropic glutamate receptor activity enablesIBAFB:FBgn0019985 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Grm2Ratgroup II metabotropic glutamate receptor activity  IMP 1298933 RGD 
Grm2Ratgroup II metabotropic glutamate receptor activity enablesIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP000000239591600115GO_REF:0000107EnsemblGO_REF:0000107
Grm2Ratgroup II metabotropic glutamate receptor activity enablesISOGrm2 (Mus musculus)1624291 PMID:7965099RGDPMID:7965099
Grm2Ratprotein binding enablesIPIUniProtKB:P148428553550PMID:19590495IntAct 
Grm2Ratprotein binding enablesIPIUniProtKB:Q96S598554412PMID:18555800IntAct 
Grm2Ratprotein binding enablesISOGRM2 (Homo sapiens)1624291UniProtKB:O14880 more ...RGDPMID:18297054 more ...
Grm2Ratscaffold protein binding enablesIPIUniProtKB:O1474521201273PMID:28392297ARUK-UCL 
Grm2Ratscaffold protein binding enablesIPIUniProtKB:Q8SQG921201273PMID:28392297ARUK-UCL 
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Imported Annotations - KEGG (archival)

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Grm2Ratglutamate signaling pathway  IEA 6907045 KEGGrno:04724
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Grm2Ratabnormal behavioral response to addictive substance  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratabnormal behavioral response to morphine  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratabnormal behavioral withdrawal response  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratabnormal cocaine self-administration  IMP 38501064KO compared to wild-type ratsRGD 
Grm2Ratabnormal cue-induced reinstatement of an extinguished operant behavior for a cocaine reinforcer  IMP 38501064knockout compared to wild typeRGD 
Grm2Ratabnormal cue-induced reinstatement of an extinguished operant behavior for a cocaine reinforcer  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratabnormal extinction of cocaine self-administration  IMP 38501064knockout compared to wild typeRGD 
Grm2Ratabnormal neurotransmitter secretion  IMP 38501064knockout compared to wild typeRGD 
Grm2Ratabnormal neurotransmitter secretion  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratabnormal nocifensive behavior  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratabnormal response to electrical stimuli  IMP 38501064knockout compared to wild typeRGD 
Grm2Rataddiction  IMP 38501064knockout compared to wild typeRGD 
Grm2Ratenhanced behavioral response to cocaine  IMP 38501064knockout compared to wild typeRGD 
Grm2Ratenhanced behavioral response to morphine  IMP 38501064knockout compared to wild typeRGD 
Grm2Ratenhanced behavioral response to morphine  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratenhanced behavioral response to nicotine  IMP 38501064knockout compared to wild typeRGD 
Grm2Rathigh preference for an addictive substance  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratincreased chemically-elicited antinociception  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratincreased nervous system dopamine level  IMP 38501063knock-out compared to wild-type ratsRGD 
Grm2Ratincreased thermal nociceptive threshold  IMP 38501063knock-out compared to wild-type ratsRGD 
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Reference Title
Reference Citation
1. Subsynaptic mobility of presynaptic mGluR types is differentially regulated by intra- and extracellular interactions. Bodzęta A, etal., Mol Biol Cell. 2022 Jul 1;33(8):ar66. doi: 10.1091/mbc.E21-10-0484. Epub 2022 May 5.
2. PICK1 interacts with and regulates PKC phosphorylation of mGLUR7. Dev KK, etal., J Neurosci. 2000 Oct 1;20(19):7252-7.
3. Differences in 5-HT2A and mGlu2 Receptor Expression Levels and Repressive Epigenetic Modifications at the 5-HT2A Promoter Region in the Roman Low- (RLA-I) and High- (RHA-I) Avoidance Rat Strains. Fomsgaard L, etal., Mol Neurobiol. 2018 Mar;55(3):1998-2012. doi: 10.1007/s12035-017-0457-y. Epub 2017 Mar 6.
4. Deletion of the type 2 metabotropic glutamate receptor increases heroin abuse vulnerability in transgenic rats. Gao JT, etal., Neuropsychopharmacology. 2018 Dec;43(13):2615-2626. doi: 10.1038/s41386-018-0231-5. Epub 2018 Oct 3.
5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
7. Differential plasma membrane distribution of metabotropic glutamate receptors mGluR1 alpha, mGluR2 and mGluR5, relative to neurotransmitter release sites. Luján R, etal., J Chem Neuroanat. 1997 Oct;13(4):219-41.
8. Different roles of group I and group II metabotropic glutamate receptors on phencyclidine-induced dopamine release in the rat prefrontal cortex. Maeda J, etal., Neurosci Lett 2003 Jan 23;336(3):171-4.
9. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
10. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. Metabotropic glutamate receptor 2 modulates excitatory synaptic transmission in the rat globus pallidus. Poisik O, etal., Neuropharmacology. 2005;49 Suppl 1:57-69.
13. GOA pipeline RGD automated data pipeline
14. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Group II metabotropic glutamate receptor interactions with NHERF scaffold proteins: Implications for receptor localization in brain. Ritter-Makinson SL, etal., Neuroscience. 2017 Jun 14;353:58-75. doi: 10.1016/j.neuroscience.2017.03.060. Epub 2017 Apr 7.
17. Crosstalk between GABAB and mGlu1a receptors reveals new insight into GPCR signal integration. Rives ML, etal., EMBO J. 2009 Aug 5;28(15):2195-208. doi: 10.1038/emboj.2009.177. Epub 2009 Jul 9.
18. Enhancement of low-voltage-activated calcium currents by group II metabotropic glutamate receptors in rat retinal ganglion cells. Robbins J, etal., Mol Cell Neurosci 2003 Jul;23(3):341-50.
19. Ethanol concentration-dependent alterations in gene expression during acute binge drinking in the HIV-1 transgenic rat. Sarkar S and Chang SL, Alcohol Clin Exp Res. 2013 Jul;37(7):1082-90. doi: 10.1111/acer.12077. Epub 2013 Feb 15.
20. RanBPM is expressed in synaptic layers of the mammalian retina and binds to metabotropic glutamate receptors. Seebahn A, etal., FEBS Lett. 2008 Jul 9;582(16):2453-7. doi: 10.1016/j.febslet.2008.06.010. Epub 2008 Jun 13.
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PMID:1298933   PMID:7965099   PMID:8662555   PMID:11584003   PMID:11850456   PMID:12074840   PMID:12746871   PMID:14645456   PMID:15208212   PMID:15494036   PMID:15861463   PMID:15862522  
PMID:16000629   PMID:16408587   PMID:16760343   PMID:16793029   PMID:17005860   PMID:17030435   PMID:17216195   PMID:17401670   PMID:17948876   PMID:18804094   PMID:19026992   PMID:19429193  
PMID:19776267   PMID:20826132   PMID:20923868   PMID:21198990   PMID:21470207   PMID:21677028   PMID:21681341   PMID:21896740   PMID:22479593   PMID:22531751   PMID:22653971   PMID:22914798  
PMID:22973014   PMID:22984605   PMID:23382250   PMID:23407939   PMID:23455609   PMID:24067361   PMID:24082084   PMID:24486391   PMID:24495291   PMID:26051401   PMID:26071959   PMID:26134564  
PMID:26987983   PMID:27385724   PMID:27565411   PMID:28661401   PMID:28821279   PMID:28829739   PMID:29024663   PMID:30005976   PMID:31050077   PMID:32534177   PMID:32640261   PMID:33201416  
PMID:37917117  



Grm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88116,158,810 - 116,171,857 (-)NCBIGRCr8
mRatBN7.28107,280,099 - 107,293,159 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,280,099 - 107,293,146 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8112,903,031 - 112,916,129 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08111,102,213 - 111,115,309 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,944,991 - 108,958,085 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,344,999 - 115,358,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,344,999 - 115,358,046 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,705,123 - 114,718,193 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,837,086 - 111,850,133 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18111,857,819 - 111,869,581 (-)NCBI
Celera8106,592,051 - 106,605,096 (-)NCBICelera
Cytogenetic Map8q32NCBI
GRM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,707,068 - 51,718,613 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,707,068 - 51,718,613 (+)EnsemblGRCh38hg38GRCh38
GRCh37351,741,084 - 51,752,629 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,718,004 - 51,727,669 (+)NCBINCBI36Build 36hg18NCBI36
Build 34351,718,037 - 51,727,168NCBI
Celera351,718,848 - 51,731,506 (+)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef351,802,839 - 51,816,142 (+)NCBIHuRef
CHM1_1351,693,893 - 51,705,447 (+)NCBICHM1_1
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBIT2T-CHM13v2.0
Grm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,521,733 - 106,533,308 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,520,294 - 106,533,281 (-)EnsemblGRCm39 Ensembl
GRCm389106,644,534 - 106,656,109 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,643,095 - 106,656,082 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,546,865 - 106,558,440 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369106,546,755 - 106,558,434 (-)NCBIMGSCv36mm8
Celera9106,265,562 - 106,277,130 (-)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.98NCBI
Grm2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555323,309,028 - 3,320,966 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555323,309,034 - 3,320,954 (+)NCBIChiLan1.0ChiLan1.0
GRM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2251,694,559 - 51,707,434 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1351,699,333 - 51,712,208 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0351,639,792 - 51,652,779 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1352,873,144 - 52,884,401 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl352,873,144 - 52,884,395 (+)Ensemblpanpan1.1panPan2
GRM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,915,178 - 37,926,276 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,915,665 - 37,924,296 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,895,193 - 37,906,256 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02038,264,331 - 38,275,394 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2038,264,304 - 38,275,372 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,627,888 - 37,638,953 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02038,036,604 - 38,047,669 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02038,321,755 - 38,332,818 (-)NCBIUU_Cfam_GSD_1.0
Grm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,281,725 - 66,293,182 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365293,042,248 - 3,053,673 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365293,042,220 - 3,053,670 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1333,926,804 - 33,938,269 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11333,924,303 - 33,938,279 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,130,553 - 37,141,351 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GRM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,044,974 - 13,056,469 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2213,046,641 - 13,056,453 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041153,898,374 - 153,910,372 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Grm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247305,419,896 - 5,431,361 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247305,419,892 - 5,431,268 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Grm2
55 total Variants

Predicted Target Of
Summary Value
Count of predictions:437
Count of miRNA genes:228
Interacting mature miRNAs:281
Transcripts:ENSRNOT00000017607
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
1358903Bp252Blood pressure QTL 25270.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat

1 to 10 of 24 rows

This gene Grm2 is modified in the following models/strains:
WI-Grm2em1    




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
8 10 16 113 62 61 30 25 30 6 127 61 93 20 51 31



Ensembl Acc Id: ENSRNOT00000017607   ⟹   ENSRNOP00000017607
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8107,280,099 - 107,293,146 (-)Ensembl
Rnor_6.0 Ensembl8115,344,999 - 115,358,046 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098540   ⟹   ENSRNOP00000091771
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8107,282,024 - 107,293,146 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101861   ⟹   ENSRNOP00000081739
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8107,280,099 - 107,293,146 (-)Ensembl
RefSeq Acc Id: NM_001105711   ⟹   NP_001099181
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88116,158,810 - 116,171,857 (-)NCBI
mRatBN7.28107,280,099 - 107,293,146 (-)NCBI
Rnor_6.08115,344,999 - 115,358,046 (-)NCBI
Rnor_5.08114,705,123 - 114,718,193 (-)NCBI
RGSC_v3.48111,837,086 - 111,850,133 (-)RGD
Celera8106,592,051 - 106,605,096 (-)RGD
Sequence:
RefSeq Acc Id: XM_063264894   ⟹   XP_063120964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88116,160,086 - 116,171,844 (-)NCBI
Protein RefSeqs NP_001099181 (Get FASTA)   NCBI Sequence Viewer  
  XP_063120964 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL77281 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000017607
  ENSRNOP00000017607.2
  ENSRNOP00000091771
GenBank Protein P31421 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001099181   ⟸   NM_001105711
- Peptide Label: precursor
- UniProtKB: P31421 (UniProtKB/Swiss-Prot),   A6I2U6 (UniProtKB/TrEMBL),   A0A8I6AGD5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000017607   ⟸   ENSRNOT00000017607
Ensembl Acc Id: ENSRNOP00000081739   ⟸   ENSRNOT00000101861
Ensembl Acc Id: ENSRNOP00000091771   ⟸   ENSRNOT00000098540
RefSeq Acc Id: XP_063120964   ⟸   XM_063264894
- Peptide Label: isoform X1
- UniProtKB: P31421 (UniProtKB/Swiss-Prot),   A6I2U6 (UniProtKB/TrEMBL),   A0A8I6AGD5 (UniProtKB/TrEMBL)
Name Modeler Protein Id AA Range Protein Structure
AF-P31421-F1-model_v2 AlphaFold P31421 1-872 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 38 of 38 rows
Database
Acc Id
Source(s)
BIND 144397
BioCyc Gene G2FUF-29226 BioCyc
Ensembl Genes ENSRNOG00000013171 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000017607 ENTREZGENE
  ENSRNOT00000017607.4 UniProtKB/Swiss-Prot
  ENSRNOT00000098540 ENTREZGENE
Gene3D-CATH 2.10.50.30 UniProtKB/Swiss-Prot
  3.40.50.2300 UniProtKB/Swiss-Prot
InterPro ANF_lig-bd_rcpt UniProtKB/Swiss-Prot
  GPCR_3 UniProtKB/Swiss-Prot
  GPCR_3_9-Cys_dom UniProtKB/Swiss-Prot
  GPCR_3_9-Cys_sf UniProtKB/Swiss-Prot
  GPCR_3_C UniProtKB/Swiss-Prot
  GPCR_3_CS UniProtKB/Swiss-Prot
  GPCR_3_mtglu_rcpt UniProtKB/Swiss-Prot
  GPCR_3_mtglu_rcpt_2 UniProtKB/Swiss-Prot
  mGluR UniProtKB/Swiss-Prot
  Peripla_BP_I UniProtKB/Swiss-Prot
KEGG Report rno:24415 UniProtKB/Swiss-Prot
NCBI Gene 24415 ENTREZGENE
PANTHER METABOTROPIC GLUTAMATE RECEPTOR UniProtKB/Swiss-Prot
Pfam 7tm_3 UniProtKB/Swiss-Prot
  ANF_receptor UniProtKB/Swiss-Prot
  NCD3G UniProtKB/Swiss-Prot
PhenoGen Grm2 PhenoGen
PRINTS GPCRMGR UniProtKB/Swiss-Prot
  MTABOTROPC2R UniProtKB/Swiss-Prot
  MTABOTROPICR UniProtKB/Swiss-Prot
PROSITE G_PROTEIN_RECEP_F3_1 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F3_2 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F3_3 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F3_4 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000013171 RatGTEx
Superfamily-SCOP SSF53822 UniProtKB/Swiss-Prot
UniProt A0A8I5ZT60_RAT UniProtKB/TrEMBL
  A0A8I6AGD5 ENTREZGENE, UniProtKB/TrEMBL
  A6I2U6 ENTREZGENE, UniProtKB/TrEMBL
  GRM2_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 38 of 38 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-13 Grm2  glutamate metabotropic receptor 2  Grm2  glutamate receptor, metabotropic 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-06-27     Grm2  glutamate receptor, metabotropic 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-11-06 Grm2  glutamate receptor, metabotropic 2    Glutamate receptor, metabotropic 2  Name updated 625702 APPROVED
2002-06-10 Grm2  Glutamate receptor, metabotropic 2      Symbol and Name status set to approved 70586 APPROVED