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Gene: Spag17 (sperm associated antigen 17) Rattus norvegicus

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Symbol:

Spag17

Name:

sperm associated antigen 17

RGD ID:

1592218

Description:

Predicted to be involved in cilium assembly; epithelial cilium movement involved in extracellular fluid movement; and spermatid development. Predicted to act upstream of or within establishment of localization in cell. Predicted to be located in Golgi apparatus; acrosomal vesicle; and manchette. Predicted to be active in axonemal central apparatus. Human ortholog(s) of this gene implicated in spermatogenic failure 55. Orthologous to human SPAG17 (sperm associated antigen 17); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; methoxychlor.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC690746; similar to projection protein PF6; sperm-associated antigen 17

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SPAG17 (sperm associated antigen 17)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Spag17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Spag17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SPAG17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SPAG17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Spag17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SPAG17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SPAG17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Spag17 (sperm associated antigen 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	MAU2 (MAU2 sister chromatid cohesion factor)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SPAG17 (sperm associated antigen 17)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Spag17 (sperm associated antigen 17)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-208b23.5	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	spag17	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	189,952,649 - 190,199,623 (+)	NCBI		GRCr8
mRatBN7.2	2	187,264,004 - 187,511,061 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	187,264,009 - 187,510,501 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	2	202,159,659 - 202,452,361 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	202,200,797 - 202,443,026 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	221,858,583 - 221,903,718 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	221,623,554 - 221,784,884 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	221,837,514 - 221,849,735 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	194,845,206 - 195,089,225 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	179,716,884 - 179,959,180 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spag17	Rat	Idiopathic Short Stature, Autosomal		ISO	SPAG17 (Homo sapiens)	11535959	DNA:snp:enhancer:C>G (rs17038182) (human)	RGD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spag17	Rat	cranioectodermal dysplasia 2		ISO	SPAG17 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cranioectodermal dysplasia 2	ClinVar
Spag17	Rat	Meniere's disease		ISO	SPAG17 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Meniere disease	ClinVar
Spag17	Rat	spermatogenic failure 55		ISO	SPAG17 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spag17	Rat	spermatogenic failure 55		ISO	SPAG17 (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spag17	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of SPAG17 mRNA	CTD	PMID:32109520
Spag17	Rat	2,3,7,8-Tetrachlorodibenzofuran	increases expression	EXP		6480464	2 more ...	CTD	PMID:32109520
Spag17	Rat	4,4'-sulfonyldiphenol	increases methylation	ISO	SPAG17 (Homo sapiens)	6480464	bisphenol S results in increased methylation of SPAG17 gene	CTD	PMID:31601247
Spag17	Rat	aflatoxin B1	increases methylation	ISO	SPAG17 (Homo sapiens)	6480464	Aflatoxin B1 results in increased methylation of SPAG17 gene	CTD	PMID:27153756
Spag17	Rat	aristolochic acid A	decreases expression	ISO	SPAG17 (Homo sapiens)	6480464	aristolochic acid I results in decreased expression of SPAG17 mRNA	CTD	PMID:33212167
Spag17	Rat	benzo[a]pyrene	increases methylation	ISO	SPAG17 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of SPAG17 5' UTR and Benzo(a)pyrene results in increased methylation of SPAG17 promoter	CTD	PMID:27901495
Spag17	Rat	bis(2-ethylhexyl) phthalate	decreases expression	ISO	SPAG17 (Homo sapiens)	6480464	Diethylhexyl Phthalate results in decreased expression of SPAG17 mRNA	CTD	PMID:31163220
Spag17	Rat	bis(2-ethylhexyl) phthalate	increases expression	ISO	Spag17 (Mus musculus)	6480464	Diethylhexyl Phthalate results in increased expression of SPAG17 mRNA	CTD	PMID:34319233
Spag17	Rat	butane-2,3-dione	decreases expression	ISO	SPAG17 (Homo sapiens)	6480464	Diacetyl results in decreased expression of SPAG17 mRNA	CTD	PMID:30710127
Spag17	Rat	carbon nanotube	decreases expression	ISO	Spag17 (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681
Spag17	Rat	glyphosate	increases expression	ISO	Spag17 (Mus musculus)	6480464	Glyphosate results in increased expression of SPAG17 mRNA	CTD	PMID:35489704
Spag17	Rat	lead diacetate	increases expression	ISO	Spag17 (Mus musculus)	6480464	lead acetate results in increased expression of SPAG17 mRNA	CTD	PMID:20542052
Spag17	Rat	methoxychlor	affects methylation	EXP		6480464	Methoxychlor affects the methylation of SPAG17 gene	CTD	PMID:35440735
Spag17	Rat	methylmercury chloride	decreases expression	ISO	SPAG17 (Homo sapiens)	6480464	methylmercuric chloride results in decreased expression of SPAG17 mRNA	CTD	PMID:28001369
Spag17	Rat	nickel atom	decreases expression	ISO	SPAG17 (Homo sapiens)	6480464	Nickel results in decreased expression of SPAG17 mRNA	CTD	PMID:24768652
Spag17	Rat	pentane-2,3-dione	decreases expression	ISO	SPAG17 (Homo sapiens)	6480464	2 and 3-pentanedione results in decreased expression of SPAG17 mRNA	CTD	PMID:30710127
Spag17	Rat	sodium arsenite	increases expression	ISO	SPAG17 (Homo sapiens)	6480464	sodium arsenite results in increased expression of SPAG17 mRNA	CTD	PMID:34032870
Spag17	Rat	sodium arsenite	increases expression	ISO	Spag17 (Mus musculus)	6480464	sodium arsenite results in increased expression of SPAG17 mRNA	CTD	PMID:37682722
Spag17	Rat	titanium dioxide	affects expression	ISO	Spag17 (Mus musculus)	6480464	titanium dioxide affects the expression of SPAG17 mRNA	CTD	PMID:23557971
Spag17	Rat	triptonide	increases expression	ISO	Spag17 (Mus musculus)	6480464	triptonide results in increased expression of SPAG17 mRNA	CTD	PMID:33045310
Spag17	Rat	trovafloxacin	increases expression	ISO	Spag17 (Mus musculus)	6480464	trovafloxacin results in increased expression of SPAG17 mRNA	CTD	PMID:35537566
Spag17	Rat	valproic acid	increases expression	ISO	SPAG17 (Homo sapiens)	6480464	Valproic Acid results in increased expression of SPAG17 mRNA	CTD	PMID:23179753

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spag17	Rat	axonemal central apparatus assembly	involved_in	IBA	MGI:1921612 and PANTHER:PTN001095059	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Spag17	Rat	axonemal central apparatus assembly	acts_upstream_of_or_within	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	axonemal central apparatus assembly	acts_upstream_of_or_within	ISO	Spag17 (Mus musculus)	1624291	MGI:4364991 PMID:23418344	RGD	PMID:23418344
Spag17	Rat	biological_process		ND		1598407	09/2016: no relevant rat data	RGD
Spag17	Rat	epithelial cilium movement involved in extracellular fluid movement	acts_upstream_of_or_within	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	epithelial cilium movement involved in extracellular fluid movement	acts_upstream_of_or_within	ISO	Spag17 (Mus musculus)	1624291	MGI:4364991 PMID:23418344	RGD	PMID:23418344
Spag17	Rat	epithelial cilium movement involved in extracellular fluid movement	involved_in	IBA	MGI:1921612 and PANTHER:PTN001095061	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Spag17	Rat	establishment of localization in cell	acts_upstream_of_or_within	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	establishment of localization in cell	acts_upstream_of_or_within	ISO	Spag17 (Mus musculus)	1624291	MGI:4364991 PMID:23418344	RGD	PMID:23418344
Spag17	Rat	intramanchette transport	involved_in	ISO	Spag17 (Mus musculus)	1624291	PMID:29690537	RGD	PMID:29690537
Spag17	Rat	intramanchette transport	involved_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	manchette assembly	involved_in	ISO	Spag17 (Mus musculus)	1624291	PMID:29690537	RGD	PMID:29690537
Spag17	Rat	manchette assembly	involved_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	motile cilium assembly	involved_in	ISO	Spag17 (Mus musculus)	1624291	PMID:32988999	RGD	PMID:32988999
Spag17	Rat	motile cilium assembly	involved_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	spermatogenesis	involved_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	spermatogenesis	involved_in	ISO	Spag17 (Mus musculus)	1624291	PMID:29690537	RGD	PMID:29690537

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spag17	Rat	acrosomal vesicle	located_in	ISO	Spag17 (Mus musculus)	1624291	PMID:29690537	RGD	PMID:29690537
Spag17	Rat	acrosomal vesicle	located_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	axonemal central apparatus	located_in	ISO	Spag17 (Mus musculus)	1624291	MGI:4364991 PMID:15827353 and PMID:23418344	RGD	PMID:15827353 and PMID:23418344
Spag17	Rat	axonemal central apparatus	located_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	axonemal central apparatus	is_active_in	IBA	MGI:1921612 and PANTHER:PTN001095059	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Spag17	Rat	cytoplasm	located_in	ISO	Spag17 (Mus musculus)	1624291	PMID:29690537	RGD	PMID:29690537
Spag17	Rat	cytoplasm	located_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	extracellular region	located_in	IEA	GO:0003351	1600115	GO_REF:0000108	GOC	GO_REF:0000108
Spag17	Rat	Golgi apparatus	located_in	ISO	Spag17 (Mus musculus)	1624291	PMID:29690537	RGD	PMID:29690537
Spag17	Rat	Golgi apparatus	located_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Spag17	Rat	manchette	located_in	ISO	Spag17 (Mus musculus)	1624291	PMID:29690537	RGD	PMID:29690537
Spag17	Rat	manchette	located_in	IEA	UniProtKB:Q5S003 and ensembl:ENSMUSP00000134066	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Spag17	Rat	protein binding	enables	ISO	Spag17 (Mus musculus)	1624291	UniProtKB:Q9JLI7 and PMID:15827353	RGD	PMID:15827353

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Identification of 15 loci influencing height in a Korean population.	Kim JJ, etal., J Hum Genet. 2010 Jan;55(1):27-31. doi: 10.1038/jhg.2009.116. Epub 2009 Nov 6.
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation

PMID:15827353	PMID:23418344

Spag17
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	189,952,649 - 190,199,623 (+)	NCBI		GRCr8
mRatBN7.2	2	187,264,004 - 187,511,061 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	187,264,009 - 187,510,501 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	2	202,159,659 - 202,452,361 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	202,200,797 - 202,443,026 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	221,858,583 - 221,903,718 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	221,623,554 - 221,784,884 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	221,837,514 - 221,849,735 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	194,845,206 - 195,089,225 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	179,716,884 - 179,959,180 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

SPAG17
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	117,953,590 - 118,185,228 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	117,953,590 - 118,185,228 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	118,496,213 - 118,727,851 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	118,297,811 - 118,529,357 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	116,723,952 - 116,955,535 (-)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI
HuRef	1	116,352,708 - 116,584,124 (-)	NCBI		HuRef
CHM1_1	1	118,611,575 - 118,843,130 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	117,962,843 - 118,194,535 (-)	NCBI		T2T-CHM13v2.0

Spag17
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	99,792,653 - 100,050,638 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	99,792,722 - 100,050,638 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	99,885,417 - 100,143,322 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	99,885,406 - 100,143,322 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	99,689,340 - 99,947,245 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	100,014,493 - 100,271,849 (+)	NCBI		MGSCv36	mm8
Celera	3	102,093,645 - 102,348,668 (+)	NCBI		Celera
Cytogenetic Map	3	F2.2	NCBI
cM Map	3	43.25	NCBI

Spag17
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	21,078,646 - 21,282,043 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955435	21,063,005 - 21,281,997 (-)	NCBI	ChiLan1.0	ChiLan1.0

SPAG17
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	110,598,616 - 110,830,233 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	110,202,434 - 110,434,010 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	84,339,906 - 84,571,723 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	119,335,369 - 119,556,711 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

SPAG17
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	55,248,136 - 55,468,036 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	55,248,137 - 55,467,902 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	54,891,599 - 55,114,823 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	56,127,507 - 56,346,757 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	56,127,513 - 56,347,359 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	55,161,427 - 55,381,719 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	55,199,577 - 55,419,614 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	55,774,338 - 56,001,496 (-)	NCBI		UU_Cfam_GSD_1.0

Spag17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	11,287,645 - 11,496,064 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936627	3,003,160 - 3,201,263 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936627	3,002,893 - 3,201,294 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPAG17
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	102,427,186 - 102,848,843 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	102,596,465 - 102,826,213 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	112,361,404 - 112,451,393 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPAG17
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	15,545,340 - 15,780,126 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	15,579,532 - 15,767,354 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	18,210,829 - 18,453,389 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spag17
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	13,636,625 - 13,836,466 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	13,626,247 - 13,836,442 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Spag17
2428 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	192
Count of miRNA genes:	87
Interacting mature miRNAs:	91
Transcripts:	ENSRNOT00000042263, ENSRNOT00000071938
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	114837527	211674221	Rat
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	2	161699179	222436696	Rat
1331734	Bp204	Blood pressure QTL 204	3.61192		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	168358098	223265385	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	18960362	228801039	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	136445150	202447032	Rat
152025245	Scl81	Serum cholesterol level QTL 81	3.49		blood cholesterol amount (VT:0000180)		2	122609194	206936711	Rat
70162	Bp63	Blood pressure QTL 63	5.64		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	2	169745596	214745596	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	114837675	212549332	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	143657411	190602963	Rat
1302793	Bw16	Body weight QTL 16	5	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	2	157142209	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
61469	Bp16	Blood pressure QTL 16	5.64		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	2	169745596	214745596	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	2	135552573	202446871	Rat
1358900	Bw48	Body weight QTL 48	4.88		body mass (VT:0001259)	body weight (CMO:0000012)	2	157142078	211086598	Rat
4889834	Pur24	Proteinuria QTL 24	5.8	0.014	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	184114274	202447032	Rat
1359031	Bp275	Blood pressure QTL 275			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	185876309	219753474	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	136916935	189599348	Rat
9589044	Scfw1	Subcutaneous fat weight QTL 1	5.8	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	2	182171407	227171407	Rat
8694435	Bw166	Body weight QTL 166	14.08	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	2	182171407	227171407	Rat
1359032	Hrtrt18	Heart rate QTL 18			heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	157142078	192625452	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150540301	202447032	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
8694194	Abfw1	Abdominal fat weight QTL 1	11.7	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	2	182171407	227171407	Rat
1359022	Ppulsi1	Prepulse inhibition QTL 1	3.63		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	2	136916935	213594495	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	149559561	249053267	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
2300189	Bmd48	Bone mineral density QTL 48	5.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	179335906	224335906	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	157142078	226277316	Rat
631501	Bp101	Blood pressure QTL 101	2.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150341684	202446871	Rat
2307174	Activ3	Activity QTL 3	4.83	0.000058	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	2	168594495	213594495	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	141194931	223265385	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	141596551	202447032	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	141194931	223265385	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	112456140	212696837	Rat
1598805	Memor8	Memory QTL 8	3		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	2	150341585	189039377	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	143157029	210020885	Rat
7488929	Bp366	Blood pressure QTL 366		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	184974550	193094998	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	133914684	202447032	Rat
738013	Alc15	Alcohol consumption QTL 15	4.1	0.00022	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	2	184165752	229165752	Rat
61401	Niddm2	Non-insulin dependent diabetes mellitus QTL 2	4.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	144599348	189599348	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	112456140	212696837	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	149559561	221167075	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	0.000006	insulin secretion trait (VT:0003564)	plasma insulin level (CMO:0000342)	2	150540301	202447032	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	147798556	192798556	Rat
61417	Cia10	Collagen induced arthritis QTL 10	3.4		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	2	179946951	224946951	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
8694383	Bw158	Body weight QTL 158	7.69	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	2	182171407	227171407	Rat
7488927	Bp365	Blood pressure QTL 365		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	162765032	207765032	Rat
1598838	Bp290	Blood pressure QTL 290	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	166539266	211539266	Rat
7488925	Bp364	Blood pressure QTL 364		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	160564068	205564068	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	164073756	227146641	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
2293084	Iddm26	Insulin dependent diabetes mellitus QTL 26	2.9		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	174930955	213594495	Rat

D2Got122

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	2	190,021,109 - 190,021,388 (+)	Marker Load Pipeline
mRatBN7.2	2	187,332,447 - 187,332,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	202,226,003 - 202,226,281	NCBI	Rnor6.0
Rnor_5.0	2	221,688,974 - 221,689,252	UniSTS	Rnor5.0
RGSC_v3.4	2	194,914,245 - 194,914,523	UniSTS	RGSC3.4
RGSC_v3.4	2	194,914,244 - 194,914,523	RGD	RGSC3.4
RGSC_v3.1	2	194,876,999 - 194,877,277	RGD
RH 3.4 Map	2	1268.2	UniSTS
RH 3.4 Map	2	1268.2	RGD
RH 2.0 Map	2	961.6	RGD
Cytogenetic Map	2	q34	UniSTS

D2Uwm23

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	2	190,021,022 - 190,021,402 (+)	Marker Load Pipeline
mRatBN7.2	2	187,332,360 - 187,332,740 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	202,225,916 - 202,226,295	NCBI	Rnor6.0
Rnor_5.0	2	221,688,887 - 221,689,266	UniSTS	Rnor5.0
RGSC_v3.1	2	194,876,911 - 194,877,291	RGD
Cytogenetic Map	2	q34	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
8	4	12	97	49	54	23	23	23	6	109	50	83	25	53	31


RefSeq Transcripts	XM_008761363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000042263 ⟹ ENSRNOP00000044489

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	187,264,117 - 187,510,501 (+)	Ensembl
Rnor_6.0 Ensembl	2	202,200,797 - 202,443,026 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000071938 ⟹ ENSRNOP00000065735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	187,264,009 - 187,510,501 (+)	Ensembl
Rnor_6.0 Ensembl	2	202,200,797 - 202,443,026 (+)	Ensembl

RefSeq Acc Id:

XM_039103807 ⟹ XP_038959735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,199,623 (+)	NCBI
mRatBN7.2	2	187,264,005 - 187,511,061 (+)	NCBI

RefSeq Acc Id:

XM_039103808 ⟹ XP_038959736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,199,623 (+)	NCBI
mRatBN7.2	2	187,264,005 - 187,511,061 (+)	NCBI

RefSeq Acc Id:

XM_039103809 ⟹ XP_038959737

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,757 - 190,199,623 (+)	NCBI
mRatBN7.2	2	187,264,121 - 187,511,061 (+)	NCBI

RefSeq Acc Id:

XM_039103811 ⟹ XP_038959739

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,199,623 (+)	NCBI
mRatBN7.2	2	187,264,005 - 187,511,061 (+)	NCBI

RefSeq Acc Id:

XM_039103812 ⟹ XP_038959740

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,159,866 (+)	NCBI
mRatBN7.2	2	187,264,005 - 187,471,035 (+)	NCBI

RefSeq Acc Id:

XM_063282907 ⟹ XP_063138977

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,100,623 (+)	NCBI

RefSeq Acc Id:

XM_063282908 ⟹ XP_063138978

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	190,094,502 - 190,199,623 (+)	NCBI

RefSeq Acc Id:

XR_005501147

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,199,623 (+)	NCBI
mRatBN7.2	2	187,264,005 - 187,511,061 (+)	NCBI

RefSeq Acc Id:

XR_005501148

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,181,129 (+)	NCBI
mRatBN7.2	2	187,264,004 - 187,492,471 (+)	NCBI

RefSeq Acc Id:

XR_005501149

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,181,129 (+)	NCBI
mRatBN7.2	2	187,264,005 - 187,492,471 (+)	NCBI

RefSeq Acc Id:

XR_005501150

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	189,952,649 - 190,105,837 (+)	NCBI
mRatBN7.2	2	187,264,004 - 187,417,204 (+)	NCBI


Protein RefSeqs	XP_038959735	(Get FASTA)	NCBI Sequence Viewer
	XP_038959736	(Get FASTA)	NCBI Sequence Viewer
	XP_038959737	(Get FASTA)	NCBI Sequence Viewer
	XP_038959739	(Get FASTA)	NCBI Sequence Viewer
	XP_038959740	(Get FASTA)	NCBI Sequence Viewer
	XP_063138977	(Get FASTA)	NCBI Sequence Viewer
	XP_063138978	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000044489
	ENSRNOP00000044489.6
	ENSRNOP00000065735
	ENSRNOP00000065735.3

Ensembl Acc Id:

ENSRNOP00000044489 ⟸ ENSRNOT00000042263

Ensembl Acc Id:

ENSRNOP00000065735 ⟸ ENSRNOT00000071938

RefSeq Acc Id:	XP_038959735 ⟸ XM_039103807
- Peptide Label:	isoform X1
- UniProtKB:	M0R8D9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959739 ⟸ XM_039103811
- Peptide Label:	isoform X4
- UniProtKB:	M0R8D9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038959736 ⟸ XM_039103808
- Peptide Label:	isoform X2
- UniProtKB:	M0R8D9 (UniProtKB/TrEMBL)

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZXP4-F1-model_v2	AlphaFold	D3ZXP4	1-2296	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-51887	BioCyc
Ensembl Genes	ENSRNOG00000037196	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000042263	ENTREZGENE
	ENSRNOT00000042263.7	UniProtKB/TrEMBL
	ENSRNOT00000071938	ENTREZGENE
	ENSRNOT00000071938.3	UniProtKB/TrEMBL
InterPro	SPAG17	UniProtKB/TrEMBL
NCBI Gene	690746	ENTREZGENE
PANTHER	PTHR21963	UniProtKB/TrEMBL
	SPERM-ASSOCIATED ANTIGEN 17	UniProtKB/TrEMBL
Pfam	PapD-like	UniProtKB/TrEMBL
PhenoGen	Spag17	PhenoGen
RatGTEx	ENSRNOG00000037196	RatGTEx
UniProt	D3ZXP4_RAT	UniProtKB/TrEMBL
	M0R8D9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-11-22	Spag17	sperm associated antigen 17	LOC690746	similar to projection protein PF6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-20	LOC690746	similar to projection protein PF6			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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