Symbol:
Fam169a
Name:
family with sequence similarity 169, member A
RGD ID:
1590893
Description:
Orthologous to human FAM169A (family with sequence similarity 169 member A); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
hypothetical LOC310013; LOC310013; soluble lamin-associated protein of 75 kDa
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
FAM169A (family with sequence similarity 169 member A) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):
Fam169a (family with sequence similarity 169, member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Fam169a (family with sequence similarity 169 member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
FAM169A (family with sequence similarity 169 member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
FAM169A (family with sequence similarity 169 member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Fam169a (family with sequence similarity 169 member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
FAM169A (family with sequence similarity 169 member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
FAM169A (family with sequence similarity 169 member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Fam169a (family with sequence similarity 169 member A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Mus musculus (house mouse):
Fam169a (family with sequence similarity 169, member A)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
FAM169A (family with sequence similarity 169 member A)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
fam169ab (family with sequence similarity 169 member Ab)
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PANTHER|PhylomeDB)
Danio rerio (zebrafish):
fam169aa (family with sequence similarity 169 member Aa)
Alliance
DIOPT (Ensembl Compara|Hieranoid|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
fam169a
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 30,115,307 - 30,175,972 (+) NCBI GRCr8 mRatBN7.2 2 28,384,162 - 28,441,361 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 28,383,784 - 28,438,910 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 2 27,884,748 - 27,941,069 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 27,905,535 - 27,938,525 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 46,995,839 - 47,051,958 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 27,568,634 - 27,604,695 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 2 24,426,891 - 24,483,273 (+) NCBI Celera Cytogenetic Map 2 q12 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Fam169a Rat 1,2-dimethylhydrazine decreases expression ISO Fam169a (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of FAM169A mRNA CTD PMID:22206623 Fam169a Rat 17beta-estradiol multiple interactions EXP 6480464 [bisphenol A co-treated with Estradiol] results in decreased expression of FAM169A mRNA CTD PMID:26496021 Fam169a Rat 17beta-estradiol increases expression ISO FAM169A (Homo sapiens) 6480464 Estradiol results in increased expression of FAM169A mRNA CTD PMID:31614463 Fam169a Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO FAM169A (Homo sapiens) 6480464 Tetrachlorodibenzodioxin affects the expression of FAM169A mRNA CTD PMID:22298810 Fam169a Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of FAM169A mRNA CTD PMID:32109520 and PMID:33387578 Fam169a Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO FAM169A (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in increased expression of FAM169A mRNA CTD PMID:21632981 Fam169a Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of FAM169A mRNA CTD PMID:22298810 Fam169a Rat 3-chloropropane-1,2-diol increases expression EXP 6480464 alpha-Chlorohydrin results in increased expression of FAM169A mRNA CTD PMID:28522335 Fam169a Rat 4,4'-sulfonyldiphenol increases expression ISO Fam169a (Mus musculus) 6480464 bisphenol S results in increased expression of FAM169A mRNA CTD PMID:33297965 Fam169a Rat acrylamide increases expression ISO FAM169A (Homo sapiens) 6480464 Acrylamide results in increased expression of FAM169A mRNA CTD PMID:32763439 Fam169a Rat aflatoxin B1 increases methylation ISO FAM169A (Homo sapiens) 6480464 Aflatoxin B1 results in increased methylation of FAM169A intron CTD PMID:30157460 Fam169a Rat all-trans-retinoic acid increases expression EXP 6480464 Tretinoin results in increased expression of FAM169A mRNA CTD PMID:20488242 Fam169a Rat all-trans-retinoic acid increases expression ISO FAM169A (Homo sapiens) 6480464 Tretinoin results in increased expression of FAM169A mRNA CTD PMID:23830798 Fam169a Rat alpha-Zearalanol multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of FAM169A mRNA CTD PMID:35163327 Fam169a Rat benzo[a]pyrene decreases methylation ISO FAM169A (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased methylation of FAM169A exon CTD PMID:27901495 Fam169a Rat benzo[a]pyrene affects methylation ISO FAM169A (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of FAM169A 5' UTR and Benzo(a)pyrene affects the methylation of FAM169A promoter CTD PMID:27901495 Fam169a Rat beta-lapachone decreases expression ISO FAM169A (Homo sapiens) 6480464 beta-lapachone results in decreased expression of FAM169A mRNA CTD PMID:38218311 Fam169a Rat beta-lapachone increases expression ISO FAM169A (Homo sapiens) 6480464 beta-lapachone results in increased expression of FAM169A mRNA CTD PMID:38218311 Fam169a Rat bisphenol A multiple interactions EXP 6480464 [bisphenol A co-treated with Estradiol] results in decreased expression of FAM169A mRNA CTD PMID:26496021 Fam169a Rat bisphenol A increases expression ISO Fam169a (Mus musculus) 6480464 bisphenol A results in increased expression of FAM169A mRNA CTD PMID:35598803 Fam169a Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of FAM169A mRNA CTD PMID:30816183 Fam169a Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of FAM169A mRNA CTD PMID:25181051 Fam169a Rat bisphenol A decreases expression ISO Fam169a (Mus musculus) 6480464 bisphenol A results in decreased expression of FAM169A mRNA CTD PMID:26063408 and PMID:32156529 Fam169a Rat Brodifacoum increases expression EXP 6480464 bromfenacoum results in increased expression of FAM169A protein CTD PMID:28903499 Fam169a Rat caffeine affects phosphorylation ISO FAM169A (Homo sapiens) 6480464 Caffeine affects the phosphorylation of FAM169A protein CTD PMID:35688186 Fam169a Rat clothianidin increases expression ISO FAM169A (Homo sapiens) 6480464 clothianidin results in increased expression of FAM169A mRNA CTD PMID:29044138 Fam169a Rat cobalt dichloride increases expression EXP 6480464 cobaltous chloride results in increased expression of FAM169A mRNA CTD PMID:24386269 Fam169a Rat copper atom multiple interactions ISO FAM169A (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in decreased expression of FAM169A mRNA CTD PMID:20971185 Fam169a Rat copper(0) multiple interactions ISO FAM169A (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in decreased expression of FAM169A mRNA CTD PMID:20971185 Fam169a Rat coumarin decreases phosphorylation ISO FAM169A (Homo sapiens) 6480464 coumarin results in decreased phosphorylation of FAM169A protein CTD PMID:35688186 Fam169a Rat coumestrol decreases expression ISO FAM169A (Homo sapiens) 6480464 Coumestrol results in decreased expression of FAM169A mRNA CTD PMID:19167446 Fam169a Rat cyclosporin A decreases expression ISO FAM169A (Homo sapiens) 6480464 Cyclosporine results in decreased expression of FAM169A mRNA CTD PMID:21632981 more ... Fam169a Rat Dibutyl phosphate affects expression ISO FAM169A (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of FAM169A mRNA CTD PMID:37042841 Fam169a Rat dorsomorphin multiple interactions ISO FAM169A (Homo sapiens) 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Fam169a Rat doxorubicin decreases expression ISO FAM169A (Homo sapiens) 6480464 Doxorubicin results in decreased expression of FAM169A mRNA CTD PMID:29803840 Fam169a Rat epoxiconazole increases expression ISO Fam169a (Mus musculus) 6480464 epoxiconazole results in increased expression of FAM169A mRNA CTD PMID:35436446 Fam169a Rat folic acid decreases expression ISO Fam169a (Mus musculus) 6480464 Folic Acid results in decreased expression of FAM169A mRNA CTD PMID:25629700 Fam169a Rat FR900359 increases phosphorylation ISO FAM169A (Homo sapiens) 6480464 FR900359 results in increased phosphorylation of FAM169A protein CTD PMID:37730182 Fam169a Rat lead(0) affects expression ISO FAM169A (Homo sapiens) 6480464 Lead affects the expression of FAM169A mRNA CTD PMID:28903495 Fam169a Rat leflunomide increases expression ISO FAM169A (Homo sapiens) 6480464 leflunomide results in increased expression of FAM169A mRNA CTD PMID:28988120 Fam169a Rat lipopolysaccharide multiple interactions ISO FAM169A (Homo sapiens) 6480464 [S-(1 and 2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of FAM169A mRNA CTD PMID:35811015 Fam169a Rat mercury dibromide increases expression ISO FAM169A (Homo sapiens) 6480464 mercuric bromide results in increased expression of FAM169A mRNA CTD PMID:26272509 Fam169a Rat mercury dibromide multiple interactions ISO FAM169A (Homo sapiens) 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of FAM169A mRNA CTD PMID:27188386 Fam169a Rat mercury dichloride decreases expression ISO FAM169A (Homo sapiens) 6480464 Mercuric Chloride results in decreased expression of FAM169A mRNA CTD PMID:27188386 Fam169a Rat nickel atom increases expression ISO FAM169A (Homo sapiens) 6480464 Nickel results in increased expression of FAM169A mRNA CTD PMID:25583101 Fam169a Rat p-chloromercuribenzoic acid increases expression ISO FAM169A (Homo sapiens) 6480464 p-Chloromercuribenzoic Acid results in increased expression of FAM169A mRNA CTD PMID:26272509 Fam169a Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of FAM169A mRNA CTD PMID:33387578 Fam169a Rat paraquat increases expression EXP 6480464 Paraquat results in increased expression of FAM169A mRNA CTD PMID:32680482 Fam169a Rat perfluorooctanoic acid multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of FAM169A mRNA CTD PMID:35163327 Fam169a Rat phenobarbital increases expression ISO Fam169a (Mus musculus) 6480464 Phenobarbital results in increased expression of FAM169A mRNA CTD PMID:25270620 Fam169a Rat phenylmercury acetate increases expression ISO FAM169A (Homo sapiens) 6480464 Phenylmercuric Acetate results in increased expression of FAM169A mRNA CTD PMID:26272509 Fam169a Rat phenylmercury acetate multiple interactions ISO FAM169A (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of FAM169A mRNA CTD PMID:27188386 Fam169a Rat potassium chromate increases expression ISO FAM169A (Homo sapiens) 6480464 potassium chromate(VI) results in increased expression of FAM169A mRNA CTD PMID:22714537 Fam169a Rat S-(1,2-dichlorovinyl)-L-cysteine multiple interactions ISO FAM169A (Homo sapiens) 6480464 [S-(1 and 2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of FAM169A mRNA CTD PMID:35811015 Fam169a Rat SB 431542 multiple interactions ISO FAM169A (Homo sapiens) 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Fam169a Rat sodium arsenite decreases expression ISO Fam169a (Mus musculus) 6480464 sodium arsenite results in decreased expression of FAM169A mRNA CTD PMID:37682722 Fam169a Rat sunitinib decreases expression ISO FAM169A (Homo sapiens) 6480464 Sunitinib results in decreased expression of FAM169A mRNA CTD PMID:31533062 Fam169a Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of FAM169A mRNA CTD PMID:23411599 and PMID:34492290 Fam169a Rat titanium dioxide increases expression ISO Fam169a (Mus musculus) 6480464 titanium dioxide results in increased expression of FAM169A mRNA CTD PMID:29264374 Fam169a Rat titanium dioxide decreases methylation ISO Fam169a (Mus musculus) 6480464 titanium dioxide results in decreased methylation of FAM169A gene and titanium dioxide results in decreased methylation of FAM169A promoter CTD PMID:35295148 Fam169a Rat triphenyl phosphate affects expression ISO FAM169A (Homo sapiens) 6480464 triphenyl phosphate affects the expression of FAM169A mRNA CTD PMID:37042841 Fam169a Rat urethane decreases expression ISO FAM169A (Homo sapiens) 6480464 Urethane results in decreased expression of FAM169A mRNA CTD PMID:28818685 Fam169a Rat ursodeoxycholic acid affects expression ISO FAM169A (Homo sapiens) 6480464 Ursodeoxycholic Acid affects the expression of FAM169A mRNA CTD PMID:18422935 Fam169a Rat valproic acid affects expression ISO Fam169a (Mus musculus) 6480464 Valproic Acid affects the expression of FAM169A mRNA CTD PMID:17963808 Fam169a Rat valproic acid decreases expression ISO FAM169A (Homo sapiens) 6480464 Valproic Acid results in decreased expression of FAM169A mRNA CTD PMID:23179753 and PMID:27188386 Fam169a Rat valproic acid affects expression ISO FAM169A (Homo sapiens) 6480464 Valproic Acid affects the expression of FAM169A mRNA CTD PMID:25979313 Fam169a Rat valproic acid increases expression ISO FAM169A (Homo sapiens) 6480464 Valproic Acid results in increased expression of FAM169A mRNA CTD PMID:24935251 Fam169a Rat vinclozolin increases expression EXP 6480464 vinclozolin results in increased expression of FAM169A mRNA CTD PMID:23555832 Fam169a Rat vorinostat decreases expression ISO FAM169A (Homo sapiens) 6480464 vorinostat results in decreased expression of FAM169A mRNA CTD PMID:27188386
1,2-dimethylhydrazine (ISO) 17beta-estradiol (EXP,ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 3-chloropropane-1,2-diol (EXP) 4,4'-sulfonyldiphenol (ISO) acrylamide (ISO) aflatoxin B1 (ISO) all-trans-retinoic acid (EXP,ISO) alpha-Zearalanol (EXP) benzo[a]pyrene (ISO) beta-lapachone (ISO) bisphenol A (EXP,ISO) Brodifacoum (EXP) caffeine (ISO) clothianidin (ISO) cobalt dichloride (EXP) copper atom (ISO) copper(0) (ISO) coumarin (ISO) coumestrol (ISO) cyclosporin A (ISO) Dibutyl phosphate (ISO) dorsomorphin (ISO) doxorubicin (ISO) epoxiconazole (ISO) folic acid (ISO) FR900359 (ISO) lead(0) (ISO) leflunomide (ISO) lipopolysaccharide (ISO) mercury dibromide (ISO) mercury dichloride (ISO) nickel atom (ISO) p-chloromercuribenzoic acid (ISO) paracetamol (EXP) paraquat (EXP) perfluorooctanoic acid (EXP) phenobarbital (ISO) phenylmercury acetate (ISO) potassium chromate (ISO) S-(1,2-dichlorovinyl)-L-cysteine (ISO) SB 431542 (ISO) sodium arsenite (ISO) sunitinib (ISO) thioacetamide (EXP) titanium dioxide (ISO) triphenyl phosphate (ISO) urethane (ISO) ursodeoxycholic acid (ISO) valproic acid (ISO) vinclozolin (EXP) vorinostat (ISO)
Fam169a Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 30,115,307 - 30,175,972 (+) NCBI GRCr8 mRatBN7.2 2 28,384,162 - 28,441,361 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 28,383,784 - 28,438,910 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 2 27,884,748 - 27,941,069 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 27,905,535 - 27,938,525 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 46,995,839 - 47,051,958 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 27,568,634 - 27,604,695 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 2 24,426,891 - 24,483,273 (+) NCBI Celera Cytogenetic Map 2 q12 NCBI
FAM169A Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 5 74,777,574 - 74,866,966 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 5 74,777,574 - 74,866,966 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 5 74,073,399 - 74,162,791 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 74,109,155 - 74,198,371 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 5 69,968,151 - 70,057,308 (-) NCBI Celera Cytogenetic Map 5 q13.3 NCBI HuRef 5 69,278,377 - 69,367,630 (-) NCBI HuRef CHM1_1 5 73,506,252 - 73,595,484 (-) NCBI CHM1_1 T2T-CHM13v2.0 5 75,258,467 - 75,347,878 (-) NCBI T2T-CHM13v2.0
Fam169a Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 13 97,203,795 - 97,266,801 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 13 97,203,794 - 97,267,521 (+) Ensembl GRCm39 Ensembl GRCm38 13 97,067,287 - 97,130,293 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 13 97,067,286 - 97,131,013 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 13 97,837,242 - 97,899,477 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 13 98,171,702 - 98,231,928 (+) NCBI MGSCv36 mm8 Celera 13 100,700,957 - 100,762,928 (+) NCBI Celera Cytogenetic Map 13 D1 NCBI cM Map 13 50.66 NCBI
Fam169a Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955425 25,840,274 - 25,892,842 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955425 25,814,269 - 25,896,371 (+) NCBI ChiLan1.0 ChiLan1.0
FAM169A Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 4 40,441,521 - 40,534,336 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 5 38,595,151 - 38,687,971 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 5 40,440,291 - 40,533,018 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 5 41,053,755 - 41,143,541 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 5 41,053,754 - 41,143,534 (+) Ensembl panpan1.1 panPan2
FAM169A Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 2 57,319,095 - 57,370,443 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 2 57,322,602 - 57,361,581 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 2 54,305,544 - 54,367,748 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 2 57,852,357 - 57,915,484 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 2 57,852,383 - 57,915,431 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 2 54,916,535 - 54,979,025 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 2 55,679,431 - 55,741,658 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 2 56,576,747 - 56,638,999 (-) NCBI UU_Cfam_GSD_1.0
Fam169a Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 188,996,907 - 189,063,227 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936549 1,816,090 - 1,861,972 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936549 1,795,741 - 1,862,826 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
FAM169A Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 2 83,852,220 - 83,926,871 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 2 83,852,217 - 83,927,656 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 2 85,437,698 - 85,513,423 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
FAM169A Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 4 69,126,069 - 69,215,151 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 4 69,129,895 - 69,215,176 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666049 17,903,778 - 17,992,741 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Fam169a
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Predicted Target Of
Count of predictions: 95 Count of miRNA genes: 81 Interacting mature miRNAs: 86 Transcripts: ENSRNOT00000022120 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
10755430 Coatc6 Coat color QTL 6 0.02576 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 2 11591100 56591100 Rat 7387318 Stl32 Serum triglyceride level QTL 32 3.2 0.0003 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 2 22384627 67384627 Rat 631682 Bp115 Blood pressure QTL 115 4.3 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 2 1 37410502 Rat 10755499 Bp389 Blood pressure QTL 389 2.61 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 2 18960362 228801039 Rat 738010 Lnnr3 Liver neoplastic nodule remodeling QTL 3 2.94 liver integrity trait (VT:0010547) liver remodeling tumorous lesion number (CMO:0001461) 2 1 41244106 Rat 1358917 Cm42 Cardiac mass QTL 42 2.82 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 2 25413423 203928301 Rat 731167 Glom4 Glomerulus QTL 4 2.4 0.0082 kidney glomerulus morphology trait (VT:0005325) count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002) 2 20304672 65304672 Rat 1358913 Cm41 Cardiac mass QTL 41 2.73 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 2 25413423 203928301 Rat 738012 Anxrr3 Anxiety related response QTL 3 3.8 exploratory behavior trait (VT:0010471) percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) 2 9023519 54023519 Rat 1302794 Stl27 Serum triglyceride level QTL 27 4.4 0.0001 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 2 25413423 143657569 Rat 10402051 Gdil2 Gastrointestinal dilation QTL 2 enteric ganglion morphology trait (VT:0001045) length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836) 2 24903853 74786777 Rat 9590095 Sffal3 Serum free fatty acids level QTL 3 6.78 0.001 blood free fatty acid amount (VT:0001553) plasma free fatty acids level (CMO:0000546) 2 27157160 72157160 Rat 1331764 Bp205 Blood pressure QTL 205 3.476 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 2 26999571 43154682 Rat 1358901 Cm38 Cardiac mass QTL 38 2 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 2 25413423 157142209 Rat 1600379 Mcs18 Mammary carcinoma susceptibility QTL 18 2.6 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 2 7887772 42804738 Rat 1358899 Kidm23 Kidney mass QTL 23 3.88 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 2 25413423 157142209 Rat 1643006 Pain1 Pain QTL 1 3.63 0.005 mechanical nociception trait (VT:0002734) self mutilation severity score (CMO:0002145) 2 26999571 48268661 Rat 1358908 Bw49 Body weight QTL 49 3.36 body mass (VT:0001259) body weight (CMO:0000012) 2 25413652 157142078 Rat 1358910 Kidm27 Kidney mass QTL 27 5.77 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 2 25413423 157142209 Rat 61355 Bp36 Blood pressure QTL 36 2.9 blood pressure trait (VT:0000183) systolic blood pressure (CMO:0000004) 2 5873687 102844969 Rat 2300168 Bmd47 Bone mineral density QTL 47 6.6 0.0001 femur mineral mass (VT:0010011) bone mineral density (CMO:0001226) 2 20662448 65662448 Rat 1358911 Kidm28 Kidney mass QTL 28 5.42 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 2 25413423 157142209 Rat 1358904 Cm39 Cardiac mass QTL 39 2.26 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 2 25413423 157142209 Rat 1354617 Bp240 Blood pressure QTL 240 4 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 2 26917817 81754745 Rat 1578664 Bmd9 Bone mineral QTL density 9 5 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 2 11852062 49003364 Rat 1357990 Ael1 Aortic elastin QTL 1 3.1 0.00091 aorta elastin amount (VT:0003905) aortic elastin 2 19076825 64076825 Rat 1358887 Bw50 Body weight QTL 50 2.39 body mass (VT:0001259) body weight (CMO:0000012) 2 25413652 157142078 Rat 2290453 Scl55 Serum cholesterol level QTL 55 2.83 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 2 26917817 136917119 Rat 1358894 Kidm24 Kidney mass QTL 24 4.03 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 2 25413423 157142209 Rat 731184 Mamtr4 Mammary tumor resistance QTL 4 0.0003 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 2 16491740 61491740 Rat 1354603 Bp243 Blood pressure QTL 243 3.9 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 2 26917817 127469484 Rat
Ndufa7
Rat Assembly Chr Position (strand) Source JBrowse Rnor_5.0 11 31,140,248 - 31,140,451 NCBI Rnor5.0 Rnor_5.0 3 65,990,630 - 65,990,837 NCBI Rnor5.0 Rnor_5.0 11 30,996,807 - 30,997,010 NCBI Rnor5.0 RGSC_v3.4 3 55,312,233 - 55,312,439 UniSTS RGSC3.4 RGSC_v3.4 11 27,474,319 - 27,474,521 UniSTS RGSC3.4 Celera 2 24,433,584 - 24,433,789 UniSTS Celera 3 57,222,765 - 57,222,971 UniSTS Celera 11 26,690,195 - 26,690,397 UniSTS Cytogenetic Map 3 q22 UniSTS Cytogenetic Map 7 q12 UniSTS Cytogenetic Map 2 q12 UniSTS
BE118011
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 2 28,404,406 - 28,404,572 (+) MAPPER mRatBN7.2 Rnor_6.0 2 27,904,115 - 27,904,280 NCBI Rnor6.0 Rnor_5.0 2 47,015,004 - 47,015,169 UniSTS Rnor5.0 RGSC_v3.4 2 27,567,212 - 27,567,377 UniSTS RGSC3.4 Celera 2 24,446,335 - 24,446,500 UniSTS RH 3.4 Map 2 30.0 UniSTS Cytogenetic Map 2 q12 UniSTS
UniSTS:237085
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 2 28,438,713 - 28,438,914 (+) MAPPER mRatBN7.2 Rnor_6.0 2 27,938,422 - 27,938,622 NCBI Rnor6.0 Rnor_5.0 2 47,049,311 - 47,049,511 UniSTS Rnor5.0 RGSC_v3.4 2 27,603,378 - 27,603,578 UniSTS RGSC3.4 Celera 2 24,480,626 - 24,480,826 UniSTS Cytogenetic Map 2 q12 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
89
87
57
25
57
6
215
96
93
45
60
30
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Ensembl Acc Id:
ENSRNOT00000022120 ⟹ ENSRNOP00000022120
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 2 28,383,856 - 28,438,910 (+) Ensembl Rnor_6.0 Ensembl 2 27,905,535 - 27,938,525 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000109459 ⟹ ENSRNOP00000078762
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 2 28,383,784 - 28,438,910 (+) Ensembl
RefSeq Acc Id:
NM_001427646 ⟹ NP_001414575
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 2 30,119,236 - 30,175,972 (+) NCBI
RefSeq Acc Id:
XM_006231831 ⟹ XP_006231893
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 2 30,119,748 - 30,175,972 (+) NCBI mRatBN7.2 2 28,384,794 - 28,441,361 (+) NCBI Rnor_6.0 2 27,884,748 - 27,941,069 (+) NCBI Rnor_5.0 2 46,995,839 - 47,051,958 (+) NCBI
Sequence:
ACGATTGTTGTGCATGGGAAAGAATGACGAAATACATGGATCCCTTCTGGGAGTTTACGCGGGTATCTTGTCCAAAGTAGACTCTGACATAACCACCTGATGCAGAGAATGGCATTCCCTGTGGATTT
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RefSeq Acc Id:
XM_039103472 ⟹ XP_038959400
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 2 30,119,211 - 30,175,972 (+) NCBI mRatBN7.2 2 28,384,497 - 28,441,361 (+) NCBI
RefSeq Acc Id:
XM_039103474 ⟹ XP_038959402
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 2 30,142,505 - 30,175,972 (+) NCBI mRatBN7.2 2 28,407,911 - 28,441,361 (+) NCBI
RefSeq Acc Id:
XM_063281717 ⟹ XP_063137787
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 2 30,115,307 - 30,175,972 (+) NCBI
RefSeq Acc Id:
XP_006231893 ⟸ XM_006231831
- Peptide Label:
isoform X1
- UniProtKB:
A0A8I6G2A6 (UniProtKB/TrEMBL), D3ZKX8 (UniProtKB/TrEMBL)
- Sequence:
MQRMAFPVDLLDNCTHEELENSAEDYLSNLRCGDPENPECFSILNFTIPVSLSNVGFVPLYGGNQTQKILALFAPEDSLTAVALYLVGQWWAIDDLVKTSEPSREGLKQVSTLGERVVLYVLNRIIYR
hide sequence
Ensembl Acc Id:
ENSRNOP00000022120 ⟸ ENSRNOT00000022120
RefSeq Acc Id:
XP_038959400 ⟸ XM_039103472
- Peptide Label:
isoform X2
- UniProtKB:
D3ZKX8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_038959402 ⟸ XM_039103474
- Peptide Label:
isoform X3
- UniProtKB:
A6I519 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSRNOP00000078762 ⟸ ENSRNOT00000109459
RefSeq Acc Id:
XP_063137787 ⟸ XM_063281717
- Peptide Label:
isoform X2
- UniProtKB:
D3ZKX8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001414575 ⟸ NM_001427646
- UniProtKB:
D3ZKX8 (UniProtKB/TrEMBL)
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-10-30
Fam169a
family with sequence similarity 169, member A
LOC310013
hypothetical LOC310013
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2006-11-20
LOC310013
hypothetical LOC310013
Symbol and Name status set to provisional
70820 PROVISIONAL
