Cdk2ap2 (cyclin-dependent kinase 2 associated protein 2) - Rat Genome Database

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Gene: Cdk2ap2 (cyclin-dependent kinase 2 associated protein 2) Rattus norvegicus
Analyze
Symbol: Cdk2ap2
Name: cyclin-dependent kinase 2 associated protein 2
RGD ID: 1588883
Description: Predicted to be involved in negative regulation of G1/S transition of mitotic cell cycle; regulation of microtubule cytoskeleton organization; and regulation of stem cell division. Predicted to be part of NuRD complex. Predicted to be active in cytoplasm; microtubule; and nucleus. Orthologous to human CDK2AP2 (cyclin dependent kinase 2 associated protein 2); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: CDK2-associated protein 2; cyclin-dependent kinase 2-associated protein 2; LOC688405; similar to DOC-1 related protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81210,819,155 - 210,822,604 (+)NCBIGRCr8
mRatBN7.21201,391,056 - 201,393,137 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1201,391,466 - 201,393,137 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1209,743,716 - 209,745,384 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01216,836,947 - 216,838,615 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01209,527,960 - 209,529,628 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01219,345,638 - 219,347,709 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1219,345,918 - 219,347,728 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01226,216,312 - 226,218,360 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41206,681,430 - 206,683,098 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1198,935,992 - 198,937,660 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdk2ap2RatAicardi-Goutieres Syndrome 3  ISOCDK2AP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Aicardi-Goutieres syndrome 3ClinVarPMID:28492532
Cdk2ap2Ratimmunodeficiency 90  ISOCDK2AP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Infections more ...ClinVarPMID:28492532
Cdk2ap2Ratintellectual disability  ISOCDK2AP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdk2ap2RatProstatic Neoplasms  ISOCDK2AP2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17013881

1 to 20 of 93 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cdk2ap2Rat(1->4)-beta-D-glucan multiple interactionsISOCdk2ap2 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CDK2AP2 mRNACTDPMID:36331819
Cdk2ap2Rat1,2-dichloroethane increases expressionISOCdk2ap2 (Mus musculus)6480464ethylene dichloride results in increased expression of CDK2AP2 mRNACTDPMID:28189721 and PMID:28960355
Cdk2ap2Rat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of CDK2AP2 mRNACTDPMID:12082028
Cdk2ap2Rat17beta-estradiol decreases expressionISOCDK2AP2 (Homo sapiens)6480464Estradiol results in decreased expression of CDK2AP2 mRNACTDPMID:16474171
Cdk2ap2Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of CDK2AP2 mRNACTDPMID:32145629
Cdk2ap2Rat17beta-estradiol multiple interactionsISOCdk2ap2 (Mus musculus)6480464[Polyphenols co-treated with Estradiol] results in decreased expression of CDK2AP2 mRNACTDPMID:30077407
Cdk2ap2Rat17beta-estradiol decreases expressionISOCdk2ap2 (Mus musculus)6480464Estradiol results in decreased expression of CDK2AP2 mRNACTDPMID:30077407
Cdk2ap2Rat17beta-hydroxy-5alpha-androstan-3-one increases expressionISOCDK2AP2 (Homo sapiens)6480464Dihydrotestosterone results in increased expression of CDK2AP2 mRNACTDPMID:29581250
Cdk2ap2Rat2,2',4,4'-Tetrabromodiphenyl ether affects expressionISOCdk2ap2 (Mus musculus)64804642 more ...CTDPMID:30294300
Cdk2ap2Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOCdk2ap2 (Mus musculus)6480464Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to CDK2AP2 promoter]CTDPMID:19654925
Cdk2ap2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of CDK2AP2 mRNACTDPMID:33387578 and PMID:34747641
Cdk2ap2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOCdk2ap2 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of CDK2AP2 mRNACTDPMID:21570461 and PMID:24680724
Cdk2ap2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOCDK2AP2 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of CDK2AP2 mRNACTDPMID:20106945 and PMID:21632981
Cdk2ap2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of CDK2AP2 mRNACTDPMID:21215274 and PMID:32109520
Cdk2ap2Rat2,6-di-tert-butyl-4-methylphenol increases expressionEXP 6480464Butylated Hydroxytoluene results in increased expression of CDK2AP2 mRNACTDPMID:12082028
Cdk2ap2Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of CDK2AP2 mRNACTDPMID:30047161
Cdk2ap2Rataflatoxin B1 decreases expressionISOCdk2ap2 (Mus musculus)6480464Aflatoxin B1 results in decreased expression of CDK2AP2 mRNACTDPMID:19770486
Cdk2ap2Ratamitrole increases expressionEXP 6480464Amitrole results in increased expression of CDK2AP2 mRNACTDPMID:30047161
Cdk2ap2Ratarsenite(3-) multiple interactionsISOCDK2AP2 (Homo sapiens)6480464arsenite promotes the reaction [G3BP1 protein binds to CDK2AP2 mRNA]CTDPMID:32406909
Cdk2ap2Ratarsenous acid increases expressionISOCdk2ap2 (Mus musculus)6480464Arsenic Trioxide results in increased expression of CDK2AP2 mRNACTDPMID:35676786

1 to 20 of 93 rows

Biological Process

  

Cellular Component

  

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12944431   PMID:22548356   PMID:23781148  



Cdk2ap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81210,819,155 - 210,822,604 (+)NCBIGRCr8
mRatBN7.21201,391,056 - 201,393,137 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1201,391,466 - 201,393,137 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1209,743,716 - 209,745,384 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01216,836,947 - 216,838,615 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01209,527,960 - 209,529,628 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01219,345,638 - 219,347,709 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1219,345,918 - 219,347,728 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01226,216,312 - 226,218,360 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41206,681,430 - 206,683,098 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1198,935,992 - 198,937,660 (+)NCBICelera
Cytogenetic Map1q43NCBI
CDK2AP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381167,506,497 - 67,508,162 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1167,506,497 - 67,508,649 (-)EnsemblGRCh38hg38GRCh38
GRCh371167,273,968 - 67,275,633 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361167,030,544 - 67,032,678 (-)NCBINCBI36Build 36hg18NCBI36
Celera1164,608,370 - 64,610,504 (-)NCBICelera
Cytogenetic Map11q13.2NCBI
HuRef1163,603,170 - 63,605,408 (-)NCBIHuRef
CHM1_11167,157,015 - 67,159,253 (-)NCBICHM1_1
T2T-CHM13v2.01167,501,174 - 67,502,839 (-)NCBIT2T-CHM13v2.0
Cdk2ap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39194,146,204 - 4,149,019 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl194,147,182 - 4,149,019 (+)EnsemblGRCm39 Ensembl
GRCm38194,096,206 - 4,099,019 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl194,097,182 - 4,099,019 (+)EnsemblGRCm38mm10GRCm38
MGSCv37194,097,351 - 4,099,017 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,097,351 - 4,099,017 (+)NCBIMGSCv36mm8
Celera193,968,253 - 3,969,919 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map193.8NCBI
Cdk2ap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542217,981,267 - 17,984,517 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542217,981,267 - 17,983,480 (+)NCBIChiLan1.0ChiLan1.0
CDK2AP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2968,734,077 - 68,736,325 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11169,776,660 - 69,778,908 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01162,865,554 - 62,867,756 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11166,176,917 - 66,179,154 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1166,176,917 - 66,179,154 (-)Ensemblpanpan1.1panPan2
CDK2AP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11849,969,630 - 49,971,781 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1849,970,160 - 49,971,457 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1848,580,124 - 48,582,321 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01850,892,011 - 50,894,208 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1850,892,068 - 50,908,430 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11850,105,317 - 50,107,514 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01849,679,848 - 49,682,045 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01850,474,088 - 50,476,285 (+)NCBIUU_Cfam_GSD_1.0
Cdk2ap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049475,815,870 - 5,817,534 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365992,257,671 - 2,259,886 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365992,257,731 - 2,259,883 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDK2AP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl25,025,600 - 5,027,764 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.125,025,256 - 5,027,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.223,743,767 - 3,746,277 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CDK2AP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.116,756,853 - 6,759,087 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl16,756,909 - 6,759,090 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038104,034,694 - 104,036,928 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdk2ap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476719,027,912 - 19,030,835 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476719,028,442 - 19,030,580 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Cdk2ap2
5 total Variants


Assembly: mRatBN7.2
Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
1 201392195 201392196 G A snv BUF/N (2020), LN/MavRrrcAek (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), MR/NRrrc (2022), BUF/MnaMcwi (2022), European Variation Archive Release 3, European Variation Archive Release 4, European Variation Archive Release 6, M520/NRrrcMcwi (2019NG), SR/JrHsd (2020) View more Information


Assembly: RGSC_v3.4
Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
1 206682156 206682157 G A snv BUF/N (KNAW), M520/N (KNAW), MR/N (KNAW), SR/JrHsd (MCW), BBDP/WorN (ICL), LN/MavRrrc (ICL), LCR/2Mco (UMich), SBN/Ygl (ICL), SR/JrHsd (ICL), HCR/1Mco (UMich), LCR/1Mco (UMich), HCR/2Mco (UMich), SBH/Ygl (ICL) View more Information


Assembly: Rnor_5.0
Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
1 226217418 226217419 G A snv SBH/Ygl (MCW), SBN/Ygl (MCW), SR/JrHsd (MCW), LN/MavRrrc (KNAW), MR/N (KNAW), SR/JrHsd (KNAW), NIG-III/Hok (KyushuU), SBH/Ygl (KNAW), SBN/Ygl (KNAW), BUF/N (KNAW), M520/N (KNAW), SDLEF7/Barth (UDEL), BUF/MNa (KyushuU), BBDP/WorN (KNAW) View more Information


Assembly: Rnor_6.0
Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
1 219346767 219346768 G A snv SBH/Ygl (MCW), European Variation Archive Release 6, SR/JrHsd (MCW), CDS, Buf/N (MCW), M520/N (MCW), MR/N (MCW), BBDP/Wor (RGD), LN/MavRrrc (RGD), SBH/Ygl (RGD), SBN/Ygl (RGD), SR/JrHsd (RGD), BUF/N (2020), LN/MavRrrcAek (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), SR/JrHsd (2020), European Variation Archive Release 3, European Variation Archive Release 4, SBN/Ygl (MCW) View more Information

Predicted Target Of
Summary Value
Count of predictions:234
Count of miRNA genes:155
Interacting mature miRNAs:181
Transcripts:ENSRNOT00000025018
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 80 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1357335Bw39Body weight QTL 393.3body mass (VT:0001259)body weight (CMO:0000012)1197814409242814409Rat
2302375Bw83Body weight QTL 834.870.0002body mass (VT:0001259)body weight (CMO:0000012)1197697768242697768Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1167909849212909849Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1171629477216629477Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1171629477216629477Rat

1 to 10 of 80 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000025018   ⟹   ENSRNOP00000025018
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1201,391,469 - 201,393,137 (+)Ensembl
Rnor_6.0 Ensembl1219,345,918 - 219,347,728 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099141   ⟹   ENSRNOP00000093586
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1201,391,466 - 201,393,130 (+)Ensembl
RefSeq Acc Id: NM_001109498   ⟹   NP_001102968
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81210,820,936 - 210,822,604 (+)NCBI
mRatBN7.21201,391,469 - 201,393,137 (+)NCBI
Rnor_6.01219,346,041 - 219,347,709 (+)NCBI
Rnor_5.01226,216,312 - 226,218,360 (+)NCBI
RGSC_v3.41206,681,430 - 206,683,098 (+)RGD
Celera1198,935,992 - 198,937,660 (+)RGD
Sequence:
RefSeq Acc Id: XM_006230902   ⟹   XP_006230964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81210,819,155 - 210,822,598 (+)NCBI
mRatBN7.21201,391,056 - 201,393,132 (+)NCBI
Rnor_6.01219,345,638 - 219,347,705 (+)NCBI
Rnor_5.01226,216,312 - 226,218,360 (+)NCBI
Sequence:
Protein RefSeqs NP_001102968 (Get FASTA)   NCBI Sequence Viewer  
  XP_006230964 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM12358 (Get FASTA)   NCBI Sequence Viewer  
  EDM12359 (Get FASTA)   NCBI Sequence Viewer  
  EDM12360 (Get FASTA)   NCBI Sequence Viewer  
  EDM12361 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000025018.2
  ENSRNOP00000093586.1
RefSeq Acc Id: NP_001102968   ⟸   NM_001109498
- UniProtKB: D4A033 (UniProtKB/TrEMBL),   A6HYS8 (UniProtKB/TrEMBL),   A0A8I6AG30 (UniProtKB/TrEMBL),   A6HYS9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006230964   ⟸   XM_006230902
- Peptide Label: isoform X1
- UniProtKB: A6HYS7 (UniProtKB/TrEMBL),   A0A8I6AG30 (UniProtKB/TrEMBL),   A6HYS9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000025018   ⟸   ENSRNOT00000025018
Ensembl Acc Id: ENSRNOP00000093586   ⟸   ENSRNOT00000099141

Name Modeler Protein Id AA Range Protein Structure
AF-D4A033-F1-model_v2 AlphaFold D4A033 1-127 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13690610
Promoter ID:EPDNEW_R1135
Type:multiple initiation site
Name:Cdk2ap2_1
Description:cyclin-dependent kinase 2 associated protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01219,346,038 - 219,346,098EPDNEW


1 to 19 of 19 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-56779 BioCyc
Ensembl Genes ENSRNOG00000018391 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000025018.5 UniProtKB/TrEMBL
  ENSRNOT00000099141.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.1300 UniProtKB/TrEMBL
InterPro CDK2-associated_2 UniProtKB/TrEMBL
KEGG Report rno:688405 UniProtKB/TrEMBL
NCBI Gene 688405 ENTREZGENE
PANTHER CYCLIN-DEPENDENT KINASE 2-ASSOCIATED PROTEIN 2 UniProtKB/TrEMBL
  PTHR22607 UniProtKB/TrEMBL
Pfam CDK2AP UniProtKB/TrEMBL
PhenoGen Cdk2ap2 PhenoGen
PIRSF CDK2-associated_p2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018391 RatGTEx
UniProt A0A8I6AG30 ENTREZGENE, UniProtKB/TrEMBL
  A6HYS7 ENTREZGENE, UniProtKB/TrEMBL
  A6HYS8 ENTREZGENE, UniProtKB/TrEMBL
  A6HYS9 ENTREZGENE, UniProtKB/TrEMBL
  D4A033 ENTREZGENE, UniProtKB/TrEMBL
1 to 19 of 19 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-29 Cdk2ap2  cyclin-dependent kinase 2 associated protein 2  Cdk2ap2  CDK2-associated protein 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-07-08 Cdk2ap2  CDK2-associated protein 2  LOC683786  similar to DOC-1 related protein  Data merged from RGD:1583310 1643240 APPROVED
2008-03-05 Cdk2ap2  CDK2-associated protein 2  LOC688405  similar to DOC-1 related protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC688405  similar to DOC-1 related protein      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC683786  similar to DOC-1 related protein      Symbol and Name status set to provisional 70820 PROVISIONAL