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Gene: Fam91a1 (family with sequence similarity 91, member A1) Rattus norvegicus

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Symbol:

Fam91a1

Name:

family with sequence similarity 91, member A1

RGD ID:

1586304

Description:

Predicted to be involved in intracellular protein transport and vesicle tethering to Golgi. Predicted to be active in cytoplasmic vesicle and trans-Golgi network. Orthologous to human FAM91A1 (family with sequence similarity 91 member A1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC689997; LOC689997; MGC188756; similar to F33H2.2; uncharacterized protein LOC689997

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	91,857,261 - 91,897,019 (+)	NCBI		GRCr8
mRatBN7.2	7	89,969,558 - 90,007,546 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	89,969,605 - 90,007,556 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	91,852,199 - 91,890,391 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	94,053,469 - 94,091,662 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	93,877,563 - 93,915,502 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	98,302,803 - 98,341,201 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	98,302,953 - 98,342,367 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	98,904,335 - 98,942,732 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	95,156,793 - 95,194,731 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	86,737,368 - 86,775,231 (+)	NCBI		Celera
Cytogenetic Map	7	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Fam91a1	Rat	trichorhinophalangeal syndrome type I		ISO	FAM91A1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Trichorhinophalangeal dysplasia type I	ClinVar	PMID:25741868

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Fam91a1	Rat	1,2-dimethylhydrazine	affects expression	ISO	Fam91a1 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine affects the expression of FAM91A1 mRNA	CTD	PMID:22206623
Fam91a1	Rat	2,2',4,4'-Tetrabromodiphenyl ether	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	2 more ...	CTD	PMID:31675489
Fam91a1	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of FAM91A1 mRNA	CTD	PMID:34747641
Fam91a1	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of FAM91A1 mRNA	CTD	PMID:33387578
Fam91a1	Rat	3,3',5,5'-tetrabromobisphenol A	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	tetrabromobisphenol A results in decreased expression of FAM91A1 protein	CTD	PMID:31675489
Fam91a1	Rat	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	ISO	FAM91A1 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of FAM91A1 mRNA	CTD	PMID:28628672
Fam91a1	Rat	4,4'-sulfonyldiphenol	multiple interactions	ISO	FAM91A1 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of FAM91A1 mRNA	CTD	PMID:28628672
Fam91a1	Rat	4,4'-sulfonyldiphenol	decreases expression	ISO	Fam91a1 (Mus musculus)	6480464	bisphenol S results in decreased expression of FAM91A1 mRNA	CTD	PMID:39298647
Fam91a1	Rat	4-hydroxyphenyl retinamide	increases expression	ISO	Fam91a1 (Mus musculus)	6480464	Fenretinide results in increased expression of FAM91A1 mRNA	CTD	PMID:28973697
Fam91a1	Rat	6-propyl-2-thiouracil	increases expression	EXP		6480464	Propylthiouracil results in increased expression of FAM91A1 mRNA	CTD	PMID:30047161
Fam91a1	Rat	acetamide	decreases expression	EXP		6480464	acetamide results in decreased expression of FAM91A1 mRNA	CTD	PMID:31881176
Fam91a1	Rat	acrylamide	increases expression	EXP		6480464	Acrylamide results in increased expression of FAM91A1 mRNA	CTD	PMID:28959563
Fam91a1	Rat	aflatoxin B1	increases expression	ISO	Fam91a1 (Mus musculus)	6480464	Aflatoxin B1 results in increased expression of FAM91A1 mRNA	CTD	PMID:19770486
Fam91a1	Rat	amitrole	increases expression	EXP		6480464	Amitrole results in increased expression of FAM91A1 mRNA	CTD	PMID:30047161
Fam91a1	Rat	antirheumatic drug	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	Antirheumatic Agents results in decreased expression of FAM91A1 mRNA	CTD	PMID:24449571
Fam91a1	Rat	arsenite(3-)	multiple interactions	ISO	FAM91A1 (Homo sapiens)	6480464	arsenite inhibits the reaction [G3BP1 protein binds to FAM91A1 mRNA]	CTD	PMID:32406909
Fam91a1	Rat	benzo[a]pyrene	increases expression	ISO	Fam91a1 (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of FAM91A1 mRNA	CTD	PMID:22228805
Fam91a1	Rat	benzo[a]pyrene	decreases methylation	ISO	FAM91A1 (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased methylation of FAM91A1 promoter	CTD	PMID:27901495
Fam91a1	Rat	bisphenol A	decreases expression	ISO	Fam91a1 (Mus musculus)	6480464	bisphenol A results in decreased expression of FAM91A1 mRNA	CTD	PMID:26063408
Fam91a1	Rat	bisphenol A	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	bisphenol A results in decreased expression of FAM91A1 protein	CTD	PMID:31675489
Fam91a1	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of FAM91A1 mRNA	CTD	PMID:33296240
Fam91a1	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of FAM91A1 mRNA	CTD	PMID:25181051
Fam91a1	Rat	bisphenol F	increases expression	ISO	Fam91a1 (Mus musculus)	6480464	bisphenol F results in increased expression of FAM91A1 mRNA	CTD	PMID:38685157
Fam91a1	Rat	caffeine	decreases phosphorylation	ISO	FAM91A1 (Homo sapiens)	6480464	Caffeine results in decreased phosphorylation of FAM91A1 protein	CTD	PMID:35688186
Fam91a1	Rat	CGP 52608	multiple interactions	ISO	FAM91A1 (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to FAM91A1 gene]	CTD	PMID:28238834
Fam91a1	Rat	copper(II) sulfate	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	Copper Sulfate results in increased expression of FAM91A1 mRNA	CTD	PMID:19549813
Fam91a1	Rat	coumarin	increases phosphorylation	ISO	FAM91A1 (Homo sapiens)	6480464	coumarin results in increased phosphorylation of FAM91A1 protein	CTD	PMID:35688186
Fam91a1	Rat	crocidolite asbestos	decreases expression	ISO	Fam91a1 (Mus musculus)	6480464	Asbestos and Crocidolite results in decreased expression of FAM91A1 mRNA	CTD	PMID:29279043
Fam91a1	Rat	decabromodiphenyl ether	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	decabromobiphenyl ether results in decreased expression of FAM91A1 protein	CTD	PMID:31675489
Fam91a1	Rat	dexamethasone	multiple interactions	ISO	FAM91A1 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of FAM91A1 mRNA	CTD	PMID:28628672
Fam91a1	Rat	Dibutyl phosphate	affects expression	ISO	FAM91A1 (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of FAM91A1 mRNA	CTD	PMID:37042841
Fam91a1	Rat	dicrotophos	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	dicrotophos results in decreased expression of FAM91A1 mRNA	CTD	PMID:28302478
Fam91a1	Rat	diuron	increases expression	EXP		6480464	Diuron results in increased expression of FAM91A1 mRNA	CTD	PMID:21551480
Fam91a1	Rat	doxorubicin	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	Doxorubicin results in increased expression of FAM91A1 mRNA	CTD	PMID:29803840
Fam91a1	Rat	fenthion	decreases expression	ISO	Fam91a1 (Mus musculus)	6480464	Fenthion results in decreased expression of FAM91A1 mRNA	CTD	PMID:34813904
Fam91a1	Rat	flutamide	increases expression	EXP		6480464	Flutamide results in increased expression of FAM91A1 mRNA	CTD	PMID:24136188
Fam91a1	Rat	indometacin	multiple interactions	ISO	FAM91A1 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of FAM91A1 mRNA	CTD	PMID:28628672
Fam91a1	Rat	ivermectin	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	Ivermectin results in increased expression of FAM91A1 protein	CTD	PMID:32959892
Fam91a1	Rat	methidathion	affects expression	ISO	Fam91a1 (Mus musculus)	6480464	methidathion affects the expression of FAM91A1 mRNA	CTD	PMID:34813904
Fam91a1	Rat	methylparaben	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	methylparaben results in increased expression of FAM91A1 mRNA	CTD	PMID:31745603
Fam91a1	Rat	nefazodone	increases expression	EXP		6480464	nefazodone results in increased expression of FAM91A1 mRNA	CTD	PMID:24136188
Fam91a1	Rat	perfluorooctane-1-sulfonic acid	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	perfluorooctane sulfonic acid results in decreased expression of FAM91A1 mRNA	CTD	PMID:27153767
Fam91a1	Rat	phenobarbital	increases expression	EXP		6480464	Phenobarbital results in increased expression of FAM91A1 mRNA	CTD	PMID:30047161
Fam91a1	Rat	resveratrol	multiple interactions	ISO	FAM91A1 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of FAM91A1 mRNA	CTD	PMID:23557933
Fam91a1	Rat	sodium arsenite	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	sodium arsenite results in increased expression of FAM91A1 mRNA	CTD	PMID:38568856
Fam91a1	Rat	sodium arsenite	decreases expression	ISO	FAM91A1 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of FAM91A1 protein	CTD	PMID:30528433
Fam91a1	Rat	sodium fluoride	decreases expression	ISO	Fam91a1 (Mus musculus)	6480464	Sodium Fluoride results in decreased expression of FAM91A1 protein	CTD	PMID:28918527
Fam91a1	Rat	sulfadimethoxine	increases expression	EXP		6480464	Sulfadimethoxine results in increased expression of FAM91A1 mRNA	CTD	PMID:30047161
Fam91a1	Rat	sunitinib	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	Sunitinib results in increased expression of FAM91A1 mRNA	CTD	PMID:31533062
Fam91a1	Rat	thiram	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	Thiram results in increased expression of FAM91A1 mRNA	CTD	PMID:38568856
Fam91a1	Rat	titanium dioxide	decreases methylation	ISO	Fam91a1 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of FAM91A1 gene	CTD	PMID:35295148
Fam91a1	Rat	toluene	decreases expression	EXP		6480464	Toluene results in decreased expression of FAM91A1 mRNA	CTD	PMID:22166486
Fam91a1	Rat	trichostatin A	affects expression	ISO	FAM91A1 (Homo sapiens)	6480464	trichostatin A affects the expression of FAM91A1 mRNA	CTD	PMID:28542535
Fam91a1	Rat	valproic acid	increases expression	ISO	FAM91A1 (Homo sapiens)	6480464	Valproic Acid results in increased expression of FAM91A1 mRNA	CTD	PMID:23179753 and PMID:29154799
Fam91a1	Rat	valproic acid	decreases methylation	ISO	FAM91A1 (Homo sapiens)	6480464	Valproic Acid results in decreased methylation of FAM91A1 gene	CTD	PMID:29154799

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Fam91a1	Rat	intracellular protein transport	involved_in	ISO	FAM91A1 (Homo sapiens)	1624291	PMID:29426865	RGD	PMID:29426865
Fam91a1	Rat	intracellular protein transport	involved_in	IBA	PANTHER:PTN002002537 and UniProtKB:Q658Y4	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Fam91a1	Rat	intracellular protein transport	involved_in	IEA	UniProtKB:Q658Y4 and ensembl:ENSP00000335082	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Fam91a1	Rat	vesicle tethering to Golgi	involved_in	ISO	FAM91A1 (Homo sapiens)	1624291	PMID:29426865	RGD	PMID:29426865
Fam91a1	Rat	vesicle tethering to Golgi	involved_in	IBA	PANTHER:PTN002002537 and UniProtKB:Q658Y4	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Fam91a1	Rat	vesicle tethering to Golgi	involved_in	IEA	UniProtKB:Q658Y4 and ensembl:ENSP00000335082	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Fam91a1	Rat	cytoplasmic vesicle	located_in	ISO	FAM91A1 (Homo sapiens)	1624291	PMID:29426865	RGD	PMID:29426865
Fam91a1	Rat	cytoplasmic vesicle	located_in	IEA	UniProtKB:Q658Y4 and ensembl:ENSP00000335082	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Fam91a1	Rat	cytoplasmic vesicle	is_active_in	IBA	PANTHER:PTN002002537 and UniProtKB:Q658Y4	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Fam91a1	Rat	trans-Golgi network	located_in	ISO	FAM91A1 (Homo sapiens)	1624291	PMID:29084197 and PMID:29426865	RGD	PMID:29084197 and PMID:29426865
Fam91a1	Rat	trans-Golgi network	located_in	IEA	UniProtKB:Q658Y4 and ensembl:ENSP00000335082	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Fam91a1	Rat	trans-Golgi network	is_active_in	IBA	PANTHER:PTN002002537 and UniProtKB:Q658Y4	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Fam91a1	Rat	protein binding	enables	ISO	FAM91A1 (Homo sapiens)	1624291	UniProtKB:Q13439 more ...	RGD	PMID:29084197 and PMID:29426865

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:12477932	PMID:29084197	PMID:29426865

Fam91a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	91,857,261 - 91,897,019 (+)	NCBI		GRCr8
mRatBN7.2	7	89,969,558 - 90,007,546 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	89,969,605 - 90,007,556 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	91,852,199 - 91,890,391 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	94,053,469 - 94,091,662 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	93,877,563 - 93,915,502 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	98,302,803 - 98,341,201 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	98,302,953 - 98,342,367 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	98,904,335 - 98,942,732 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	95,156,793 - 95,194,731 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	86,737,368 - 86,775,231 (+)	NCBI		Celera
Cytogenetic Map	7	q33	NCBI

FAM91A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	123,768,439 - 123,815,452 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	123,768,439 - 123,815,452 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	124,780,679 - 124,827,692 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	124,850,063 - 124,896,873 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	8	120,968,947 - 121,015,229 (+)	NCBI		Celera
Cytogenetic Map	8	q24.13	NCBI
HuRef	8	120,107,371 - 120,154,391 (+)	NCBI		HuRef
CHM1_1	8	124,821,157 - 124,867,970 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	124,900,680 - 124,947,695 (+)	NCBI		T2T-CHM13v2.0

Fam91a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	58,277,868 - 58,329,655 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	58,287,317 - 58,329,589 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	58,405,907 - 58,457,801 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	58,415,468 - 58,457,740 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	58,247,023 - 58,289,356 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	58,257,189 - 58,287,822 (+)	NCBI		MGSCv36	mm8
Celera	15	59,943,740 - 59,986,510 (+)	NCBI		Celera
Cytogenetic Map	15	D1	NCBI
cM Map	15	24.76	NCBI

Fam91a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955540	2,561,695 - 2,601,230 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955540	2,561,695 - 2,600,144 (+)	NCBI	ChiLan1.0	ChiLan1.0

FAM91A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	141,044,467 - 141,247,764 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	116,555,642 - 116,758,987 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	120,463,599 - 120,510,937 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	123,218,674 - 123,265,837 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	123,218,674 - 123,265,838 (+)	Ensembl	panpan1.1		panPan2

FAM91A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	22,036,518 - 22,082,278 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	22,036,776 - 22,076,751 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	22,002,255 - 22,045,005 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	22,378,286 - 22,421,246 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	22,378,380 - 22,421,298 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	22,104,943 - 22,147,679 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	22,208,904 - 22,251,868 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	22,450,958 - 22,493,714 (+)	NCBI		UU_Cfam_GSD_1.0

Fam91a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	16,218,923 - 16,258,745 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	23,644,858 - 23,684,872 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	23,645,233 - 23,684,841 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM91A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	15,640,290 - 15,681,826 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	15,640,286 - 15,681,826 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	16,359,647 - 16,401,026 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM91A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	118,342,452 - 118,391,634 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	118,342,547 - 118,388,887 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	21,820,124 - 21,869,269 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam91a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	31,223,763 - 31,267,810 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	31,222,825 - 31,267,809 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Fam91a1
272 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	601
Count of miRNA genes:	281
Interacting mature miRNAs:	366
Transcripts:	ENSRNOT00000011797
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
2293667	Bss42	Bone structure and strength QTL 42	7.25	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	7	47651439	92651439	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	80221299	124373579	Rat
2317035	Aia16	Adjuvant induced arthritis QTL 16	2.71		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	59238038	104238038	Rat
2298475	Eau6	Experimental allergic uveoretinitis QTL 6		0.0029	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	7	84257275	129257275	Rat
71114	Niddm14	Non-insulin dependent diabetes mellitus QTL 14	4.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	84257275	129257275	Rat
2293678	Bss24	Bone structure and strength QTL 24	6.71	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	7	47651439	92651439	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	43747012	108555253	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	69736356	112729554	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	73829340	130221005	Rat
10450828	Scl79	Serum cholesterol level QTL 79	3.5	0.001	blood HDL cholesterol amount (VT:0000184)	blood low density lipoprotein cholesterol level (CMO:0000053)	7	89867376	101773158	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
2293685	Bmd21	Bone mineral density QTL 21	4.2	0.0003	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	7	47651439	92651439	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	44421311	118198041	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	83153392	128153392	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	81737938	126737938	Rat
631529	Tls2	T-lymphoma susceptibility QTL 2	0	0.001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	7	80221299	109401111	Rat
2293696	Bmd32	Bone mineral density QTL 32	5.1	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	7	47651439	92651439	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	53612714	103945643	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	62004452	101773158	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	46590070	91590070	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	43747099	102228765	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
1558655	Swd4	Spike wave discharge measurement QTL 4	3.68	0.0002	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge severity grade (CMO:0001988)	7	86983365	131983365	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
2293707	Bss32	Bone structure and strength QTL 32	7.64	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	47651439	92651439	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	80221299	125221299	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	41333674	119109060	Rat
1641908	Teswt1	Testicular weight QTL 1	3.28		testis mass (VT:1000644)	both testes wet weight (CMO:0000175)	7	80221299	94811326	Rat
2293644	Bmd29	Bone mineral density QTL 29	5.4	0.0001	femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	7	47651439	92651439	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	68938720	113886318	Rat
2300178	Bmd54	Bone mineral density QTL 54	5.3	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	7	47651439	92651439	Rat
724537	Niddm52	Non-insulin dependent diabetes mellitus QTL 52		0.02	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	80221299	93595843	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	61074194	106074194	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	80221299	112308525	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	62004452	101773158	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	68938720	113886318	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	68938720	113886318	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	69736226	117455174	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat

RH129007

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	90,007,249 - 90,007,457 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	98,340,905 - 98,341,112	NCBI	Rnor6.0
Rnor_5.0	7	98,942,436 - 98,942,643	UniSTS	Rnor5.0
RGSC_v3.4	7	95,194,435 - 95,194,642	UniSTS	RGSC3.4
Celera	7	86,774,935 - 86,775,142	UniSTS
Cytogenetic Map	7	q33	UniSTS

BE097950

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	90,002,186 - 90,002,390 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	98,335,842 - 98,336,045	NCBI	Rnor6.0
Rnor_5.0	7	98,937,373 - 98,937,576	UniSTS	Rnor5.0
RGSC_v3.4	7	95,189,372 - 95,189,575	UniSTS	RGSC3.4
Celera	7	86,769,910 - 86,770,113	UniSTS
Cytogenetic Map	7	q33	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001127578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC166852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011797 ⟹ ENSRNOP00000011797

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	89,969,605 - 90,007,546 (+)	Ensembl
Rnor_6.0 Ensembl	7	98,302,953 - 98,342,367 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113149 ⟹ ENSRNOP00000086281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	89,969,605 - 90,007,556 (+)	Ensembl

RefSeq Acc Id:

NM_001127578 ⟹ NP_001121050

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	91,859,080 - 91,897,019 (+)	NCBI
mRatBN7.2	7	89,969,605 - 90,007,546 (+)	NCBI
Rnor_6.0	7	98,302,806 - 98,341,201 (+)	NCBI
Rnor_5.0	7	98,904,335 - 98,942,732 (+)	NCBI
RGSC_v3.4	7	95,156,793 - 95,194,731 (+)	RGD
Celera	7	86,737,368 - 86,775,231 (+)	RGD

Sequence:

show sequence

CTAGGAAGAAACTTGAAGCTGCTGAGGCACGGGTCGTAGTCCCCGCCACTGTGCCCCGTGGCCCGCGCCGCGCGGAGCTGTGGAGGCCTGGCCATGGGGTGGCGCCGGGCTCGTGCGGCGTAGACGTA
CGGCCTCCCGCGGGCTCCACTGACGGGCCGGGCGCTCGCGGGCGGCAGGCGGCGTGGGAGCCGCGGCCACTGCGGGCCTGGGCTCCGGCATCATGAACATCGACGTTGAGTTCCACATCCGGCACAAT
TATCCTTGGAGCAAGTTGCCAACTAACGTGAAACAGAGTCTTGGAAATTCACAACGAGAATATGAAAAACAGGTTGTTTTGTACAGTATCCGCAATCAGTTGCGCTACAGAAATAACCTAGTTAAGCA
TGTCAAGAAAGATGAGCGCAAATACTATGAGGAACTGCTGAAGTATAGCCGTGATCATCTCATGCTGTACCCTTACCACTTATCCGACATCATGGTGAAGGGCCTGAGGATAACACCATTCTCATACT
ATACTGGGATCATGGAGGACATTATGAACAGTGAGAAAAGTTACGATTCATTGCCTAATTTTACTGCTGCTGACTGTCTGCGGCTTCTTGGCATAGGAAGAAACCAGTACATTGACCTGATGAATCAG
TGTAGATCTTCAAAAAAATTCTTCAGAAGGAAAACTGCCCATGATCTTCTACCAATGAAGCCAGTAGAAATTGCCATCGAGGCGTGGTGGGTGGTGCAGGCTGGATATATCACAGAAGATGACATCAA
GATATGCACTTTTCCTGAGAAAAGCGCTATTGATAAGATCATCGACTCAGGTCCTCAGCTCTCTGGATCACTAGATTACAATGTAGTACACAGTTTGTATAACAAAGGCTTTATTTATCTGGATGTGC
CCATATCAGATGACAGTTGTATAGCAGTTCCTCCTCTGGAAGGTTTTGTAATGAATCGGGTACAAGGTGATTATTTCGAAACCCTACTCTATAAAATATTTGTGTCAATAGATGAGCACACTAATGTT
GCAGAGCTTGCTAATGTCCTTGAGATAGACTTATCGCTGGTAAAGAATGCTGTTTCAATGTATTGCCGATTGGGCTTTGCCCATAAGAAGGGACAAGTAATAAACTTGGACCAACTTCATTCATCATG
GAAGAACGTTCCATCTGTGAACAGATTAAAGAGCACGTTAGACCCACAAAAGATGCTCTTATCATGGGATGGTGGGGAAAGTAGGAGTCCTGTGCAAGAAGCCTCTTCTGCTACTGACACAGATACAA
ATAGTCAAGAGGATCCAGCTGACACGGCCAGCGTCAGCAGTTTGAGTCTGTCCACTGGGCACACAAAGCGAATTGCATTCCTATTTGACTCAACTCTTACTGCATTCTTAATGATGGGAAACCTTTCA
CCAAACTTGAAAAGCCATGCAGTCACCATGTTTGAAGTGGGCAAACTCTCAGATGAGTCTCTGGACAGCTTCCTTATAGAACTAGAGAAGGTTCAGAGCACTGGTGAAGGAGAAGCACAGAGATACTT
TGACCATGCACTTACTCTGAGGAACACTATTCTCTTTCTTCGTCATAATAAAGATCTGGTAGCTCAGACCTCTCAGCCAGACCAGTCCAACTATGGTTTTCCCCTGGATCTCTTACGCTGCGAAAGCC
TTCTTGGTTTGGACCCAGCAACTTGTAGCAGAGTTCTAAACAAAAACTACACACTGCTTGTGTCTATGGCTCCTCTTACCAATGAAATCCGTCCAGTCAGCAGCTGCACTCCTCAGCATATTGGACCA
GCTATTCCAGAAGTCAGTTCTGTCTGGTTTAAATTGTATATTTACCATATCACTGGGCAAGGACCACCATCTCTCTTATTGTCCAAAGGCACAAGACTTCGGAAACTGCCAGATATATTCCAGGGTTA
TGATCGGTTACTCATAACCTCTTGGGGCCATGATCCTGGGGTCGTTCCTACATCAAATGTGCTCACGATGCTGAACGATGCTCTAACACATTCTGCAGTGCTAATTCAGGGACATGGTTTGCATGGGG
TAGGAGAGACTGTCCATATACCCTTTCCATTTGATGAAGCAGAGCTCCAAGGAGAGTTTACCCGGGCCAGCATGGGTGTTCATAAAGCATTGCAGATTCTGAGGAGCAAAGTGGACTTGCAGCATTTC
TGTGGCTATGTCACCATGTTGAATGCTTCTAGCCAGCTTGCAAGTAGAAAGCTCAGTGACGCTTCTGATGAGAGAGGCGAGCCTGATTTGGCTTCTAGTTCAGATGTAAATGGCAGTACAGAGTCGTT
TGAAATGGTCATTGAGGAAGCCAGTACAGACTTGTCTACAAAGCAAAACTCTGGGGCCACAGCAGAAGCAGATTGGGTTCCTCTTGAGCTGTGCTTTGGAATTCCTTTGTTCAGTTCTGAATTAAACC
GGAAAGTTTGTCAGAAAATAGCTACACATGGCCTGTGCAGTAAAGAGAGCCTTCAAAGTCTCTTACATTCCAGTAGAAAACTCTCTCTGCAAGTCCTTAACTTTGTCCATTCATTCCAGGAAGGTGCT
GCAACTCTGGATTTTCACGCGGAGCCTGGCTTCTCAAGTGTGTTTTCACAGTCGTCCTGCGCTGACACGGGAGTTCCACTTCCTGCCAAAAACGTAATGTTTAAAGATGGGATCTTATCCGAGTGGAG
TGGACGTTCCCCTTCCTCCCTGCTCATTGCTGGTCTCCATTTGCAGTAATTTGATTACAGCATTGTTGCTCACATACTCTGCCTTTTTCCTTTTTTAACGCTGGCTTCCCGAGGTCAGCCACTAAGCT
TCTAGCTGCCGTGGTGCAGGTCGAGCCTCATTGGTAGGAAACGCTCAGAATGTGCTCGTGTCTTCTGACGCCAGAGGCCTGTTGTTACACATCTTACTGCAGCAAGTACTTCTCAGCAGCCAGCACTG
TACTCGAGACAATCTGCATTTCTTTTATAAACTAAGGACAGACTTTATAGGCTGTAGATGACTGTTACGTTTATAAGCAGTCACTATGAATATTGCAGTGGTAGTTTTATATGTATGTTTCTCAGACA
TAAACCTGGTTTAATTTTATATTTTGTTATCTACACTGAGGGGATCACGGGAGGAGATGGACTCTTCCTCCGAAAGGCTTCTTGGTTCTTGAGGTAGTCACGCTAGAAGTGGCAAGCATCCAGCAGTG
AAGGGTATGTATGTGCTAGGGCATTAAAGGTTGCTGTAATGTCAGTAAATTATGTATGCCAAGTGAACATGATTGAGGGTATGTCAATCAGCATAGTTGTGTAAACCTAACCTTGATTTATAAGGTCT
TAACTGATGATTCATTAACATCTTATGAGAGCTTTGGAAAACATTCTATTTTTAAATGATGTTTGTATGTGGACTTCTGTCGTCACTTACCTTGGGCTTTATATTTTCATAGAGTCTATGGAAAAATA
GAATTTATTTTCCACGTGTAGTTGAGGCTGTTGCATGTCTTCAGTTTGTCTTAGCTTTACCTATGAACTCTTAGGGTAATTGACCTTGATGGTTTAAACCAAGGATTATGGTTGAAGTTGGAATTGCA
TGGCAGCAGCCCCAGGGCTGTGGTTTTGGACTTAGCTCCATGGTAAAACGATTCCTGAGACACAGCCTCTGGATCTGAAACGGTCACACAGCTCTGGGGGAGAGTGGAGAAGCACTGCCTGGCTTCAT
GTGCTTCTTTGGGCATTGGGTCTTTTAGTATCTCAAATGTCAGAATTTTTGGAACCAGGATTAGACTTTCCAGGTCACCTTCCCTGGGGTGTTTGTGTGGTTAGTTGAGCTCTCCTAACCGAACTGGT
CAAGCAACATACCTGAAACACTCAAGCATTACACTAATTGAGAACATTTGAGCTTAACAGTTTTGCTGATGGCTTTTGTTATTTATACAACTGATATTTGTGTAATTAACAGACTTCTGCAAGTATAT
GCCTTTCTTGAAACCGTTAAAGTGGCCATGTATTTCATACCATGGCCTATCTGTAGAATTGACTATTTTGGACCAGGTTACCTGTGGCACAGTTAGTGCTGTGTTTGGGGTAAATGAAGTAATGCTTA
GTTTTCTACTCTGTCTTGTGTGAGGTAGAACTGTGTGTATGTCACATTTGTCTGTAAAAGGAAAAGTACATAGTAATATTAAAATAATTTCTATGACTGTGAATTACTCATTTATTTTTCCAATTACT
GATACTGTACATTCCTAGTGCTATTAGTTATATGTGTATGTAACTTTTACAGTTTCATCTTTAAGTTGTATGTATTTCTTTTGATCAGGGCTCATTAATCTCATTTGCTTTGATTGAGTTACTGTAGG
TATCTATCTTTGTATTAGTAGTTGAATGCCAACTCTAATGACATGTACACTAATAAAGAATTGAACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006241684 ⟹ XP_006241746

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	91,857,261 - 91,891,887 (+)	NCBI
mRatBN7.2	7	89,969,558 - 90,002,414 (+)	NCBI
Rnor_6.0	7	98,302,803 - 98,336,069 (+)	NCBI
Rnor_5.0	7	98,904,335 - 98,942,732 (+)	NCBI

Sequence:

show sequence

AAACTAGGAAGAAACTTGAAGCTGCTGAGGCACGGGTCGTAGTCCCCGCCACTGTGCCCCGTGGCCCGCGCCGCGCGGAGCTGTGGAGGCCTGGCCATGGGGTGGCGCCGGGCTCGTGCGGCGTAGAC
GTACGGCCTCCCGCGGGCTCCACTGACGGGCCGGGCGCTCGCGGGCGGCAGGCGGCGTGGGAGCCGCGGCCACTGCGGGCCTGGGCTCCGGCATCATGAACATCGACGTTGAGTTCCACATCCGGCAC
AATTATCCTTGGAGCAAGTTGCCAACTAACGTGAAACAGAGTCTTGGAAATTCACAACGAGAATATGAAAAACAGGTTGTTTTGTACAGTATCCGCAATCAGTTGCGCTACAGAAATAACCTAGTTAA
GCATGTCAAGAAAGATGAGCGCAAATACTATGAGGAACTGCTGAAGTATAGCCGTGATCATCTCATGCTGTACCCTTACCACTTATCCGACATCATGGTGAAGGGCCTGAGGATAACACCATTCTCAT
ACTATACTGGGATCATGGAGGACATTATGAACAGTGAGAAAAGTTACGATTCATTGCCTAATTTTACTGCTGCTGACTGTCTGCGGCTTCTTGGCATAGGAAGAAACCAGTACATTGACCTGATGAAT
CAGTGTAGATCTTCAAAAAAATTCTTCAGAAGGAAAACTGCCCATGATCTTCTACCAATGAAGCCAGTAGAAATTGCCATCGAGGCGTGGTGGGTGGTGCAGGCTGGATATATCACAGAAGATGACAT
CAAGATATGCACTTTTCCTGAGAAAAGCGCTATTGATAAGATCATCGACTCAGGTCCTCAGCTCTCTGGATCACTAGATTACAATGTAGTACACAGTTTGTATAACAAAGGCTTTATTTATCTGGATG
TGCCCATATCAGATGACAGTTGTATAGCAGTTCCTCCTCTGGAAGGTTTTGTAATGAATCGGGTACAAGGTGATTATTTCGAAACCCTACTCTATAAAATATTTGTGTCAATAGATGAGCACACTAAT
GTTGCAGAGCTTGCTAATGTCCTTGAGATAGACTTATCGCTGGTAAAGAATGCTGTTTCAATGTATTGCCGATTGGGCTTTGCCCATAAGAAGGGACAAGTAATAAACTTGGACCAACTTCATTCATC
ATGGAAGAACGTTCCATCTGTGAACAGATTAAAGAGCACGTTAGACCCACAAAAGATGCTCTTATCATGGGATGGTGGGGAAAGTAGGAGTCCTGTGCAAGAAGCCTCTTCTGCTACTGACACAGATA
CAAATAGTCAAGAGGATCCAGCTGACACGGCCAGCGTCAGCAGTTTGAGTCTGTCCACTGGGCACACAAAGCGAATTGCATTCCTATTTGACTCAACTCTTACTGCATTCTTAATGATGGGAAACCTT
TCACCAAACTTGAAAAGCCATGCAGTCACCATGTTTGAAGTGGGCAAACTCTCAGATGAGTCTCTGGACAGCTTCCTTATAGAACTAGAGAAGGTTCAGAGCACTGGTGAAGGAGAAGCACAGAGATA
CTTTGACCATGCACTTACTCTGAGGAACACTATTCTCTTTCTTCGTCATAATAAAGATCTGGTAGCTCAGACCTCTCAGCCAGACCAGTCCAACTATGGTTTTCCCCTGGATCTCTTACGCTGCGAAA
GCCTTCTTGGTTTGGACCCAGCAACTTGTAGCAGAGTTCTAAACAAAAACTACACACTGCTTGTGTCTATGGCTCCTCTTACCAATGAAATCCGTCCAGTCAGCAGCTGCACTCCTCAGCATATTGGA
CCAGCTATTCCAGAAGTCAGTTCTGTCTGGTTTAAATTGTATATTTACCATATCACTGGGCAAGGACCACCATCTCTCTTATTGTCCAAAGGCACAAGACTTCGGAAACTGCCAGATATATTCCAGGG
TTATGATCGGTTACTCATAACCTCTTGGGGCCATGATCCTGGGGTCGTTCCTACATCAAATGTGCTCACGATGCTGAACGATGCTCTAACACATTCTGCAGTGCTAATTCAGGGACATGGTTTGCATG
GGGTAGGAGAGACTGTCCATATACCCTTTCCATTTGATGAAGCAGAGCTCCAAGGAGAGTTTACCCGGGCCAGCATGGGTGTTCATAAAGCATTGCAGATTCTGAGGAGCAAAGTGGACTTGCAGCAT
TTCTGTGGCTATGTCACCATGTTGAATGCTTCTAGCCAGCTTGCAAGTAGAAAGCTCAGTGACGCTTCTGATGAGAGAGGCGAGCCTGATTTGGCTTCTAGTTCAGATGTAAATGGCAGTACAGAGTC
GTTTGAAATGGTCATTGAGGAAGCCAGTACAGACTTGTCTACAAAGCAAAACTCTGGGGCCACAGCAGAAGCAGATTGGGTTCCTCTTGAGCTGTGCTTTGGAATTCCTTTGTTCAGTTCTGAATTAA
ACCGGAAAGTTTGTCAGAAAATAGCTACACATGGCCTGTGCAGTAAAGAGAGACATGACAGGCAGGTTTGACCTTGTGGCAAGCAGCTCCAACCCTTTGGAAGGGAGTGGCCAACTGTGGAGGGGAGA
TGCCCGCAATTCTGTCTTTTAAACTTAGGAAAACAAAGTTGGACAGCAAATAACTTAAATTATTTGGCCTAGTGAAGCTTGTATAGTAAAGAGTATTCAACGGATAATCTCCACAGCCGTTCTCTGGA
GTATGTATGAATAAAAGTATAAACACCAA

hide sequence

RefSeq Acc Id:

XR_001838719

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	91,857,261 - 91,895,193 (+)	NCBI
mRatBN7.2	7	89,969,558 - 90,005,719 (+)	NCBI
Rnor_6.0	7	98,302,803 - 98,337,680 (+)	NCBI

Sequence:

show sequence

AAACTAGGAAGAAACTTGAAGCTGCTGAGGCACGGGTCGTAGTCCCCGCCACTGTGCCCCGTGG
CCCGCGCCGCGCGGAGCTGTGGAGGCCTGGCCATGGGGTGGCGCCGGGCTCGTGCGGCGTAGACGTACGGCCTCCCGCGGGCTCCACTGACGGGCCGGGCGCTCGCGGGCGGCAGGCGGCGTGGGAGC
CGCGGCCACTGCGGGCCTGGGCTCCGGCATCATGAACATCGACGTTGAGTTCCACATCCGGCACAATTATCCTTGGAGCAAGTTGCCAACTAACGTGAAACAGAGTCTTGGAAATTCACAACGAGAAT
ATGAAAAACAGGTTGTTTTGTACAGTATCCGCAATCAGTTGCGCTACAGAAATAACCTAGTTAAGCATGTCAAGAAAGATGAGCGCAAATACTATGAGGAACTGCTGAAGTATAGCCGTGATCATCTC
ATGCTGTACCCTTACCACTTATCCGACATCATGGTGAAGGGCCTGAGGATAACACCATTCTCATACTATACTGGGATCATGGAGGACATTATGAACAGTGAGAAAAGTTACGATTCATTGCCTAATTT
TACTGCTGCTGACTGTCTGCGGCTTCTTGGCATAGGAAGAAACCAGTACATTGACCTGATGAATCAGTGTAGATCTTCAAAAAAATTCTTCAGAAGGAAAACTGCCCATGATCTTCTACCAATGAAGC
CAGTAGAAATTGCCATCGAGGCGTGGTGGGTGGTGCAGGCTGGATATATCACAGAAGATGACATCAAGATATGCACTTTTCCTGAGAAAAGCGCTATTGATAAGATCATCGACTCAGGTCCTCAGCTC
TCTGGATCACTAGATTACAATGTAGTACACAGTTTGTATAACAAAGGCTTTATTTATCTGGATGTGCCCATATCAGATGACAGTTGTATAGCAGTTCCTCCTCTGGAAGGTTTTGTAATGAATCGGGT
ACAAGGTGATTATTTCGAAACCCTACTCTATAAAATATTTGTGTCAATAGATGAGCACACTAATGTTGCAGAGCTTGCTAATGTCCTTGAGATAGACTTATCGCTGGTAAAGAATGCTGTTTCAATGT
ATTGCCGATTGGGCTTTGCCCATAAGAAGGGACAAGTAATAAACTTGGACCAACTTCATTCATCATGGAAGAACGTTCCATCTGTGAACAGATTAAAGAGCACGTTAGACCCACAAAAGATGCTCTTA
TCATGGGATGGTGGGGAAAGTAGGAGTCCTGTGCAAGAAGCCTCTTCTGCTACTGACACAGATACAAATAGTCAAGAGGATCCAGCTGACACGGCCAGCGTCAGCAGTTTGAGTCTGTCCACTGGGCA
CACAAAGCGAATTGCATTCCTATTTGACTCAACTCTTACTGCATTCTTAATGATGGGAAACCTTTCACCAAACTTGAAAAGCCATGCAGTCACCATGTTTGAAGTGGGCAAACTCTCAGATGAGTCTC
TGGACAGCTTCCTTATAGAACTAGAGAAGGTTCAGAGCACTGGTGAAGGAGAAGCACAGAGATACTTTGACCATGCACTTACTCTGAGGAACACTATTCTCTTTCTTCGTCATAATAAAGATCTGGTA
GCTCAGACCTCTCAGCCAGACCAGTCCAACTATGGTTTTCCCCTGGATCTCTTACGCTGCGAAAGCCTTCTTGGTTTGGACCCAGCAACTTGTAGCAGAGTTCTAAACAAAAACTACACACTGCTTGT
GTCTATGGCTCCTCTTACCAATGAAATCCGTCCAGTCAGCAGCTGCACTCCTCAGCATATTGGACCAGCTATTCCAGAAGTCAGTTCTGTCTGGTTTAAATTGTATATTTACCATATCACTGGGCAAG
GACCACCATCTCTCTTATTGTCCAAAGGCACAAGACTTCGGAAACTGCCAGATATATTCCAGGGTTATGATCGGTTACTCATAACCTCTTGGGGCCATGATCCTGGGGTCGTTCCTACATCAAATGTG
CTCACGATGCTGAACGATGCTCTAACACATTCTGCAGTGCTAATTCAGGGACATGGTTTGCATGGGGTAGGAGAGACTGTCCATATACCCTTTCCATTTGATGAAGCAGAGCTCCAAGGAGAGTTTAC
CCGGGCCAGCATGGGTGTTCATAAAGCATTGCAGATTCTGAGGAGCAAAGTGGACTTGCAGCATTTCTGTGGCTATGTCACCATGTTGAATGCTTCTAGCCAGCTTGCAAGTAGAAAGCTCAGTGACG
CTTCTGATGAGAGAGGCGAGCCTGATTTGGCTTCTAGTTCAGATGTAAATGGCAGTACAGAGTCGTTTGAAATGGTCATTGAGGAAGCCAGTACAGACTTGTCTACAAAGCAAAACTCTGGGGCCACA
GCAGAAGCAGATTGGGTTCCTCTTGAGCTGTGCTTTGGAATTCCTTTGTTCAGTTCTGAATTAAACCGGAAAGTTTGTCAGAAAATAGCTACACATGGCCTGTGCAGTAAAGAGAGACATGACAGGCA
GGTTTGACCTTGTGGCAAGCAGCTCCAACCCTTTGGAAGGGAGTGGCCAACTGTGGAGGGGAGATGCCCGCAATTCTGTCTTTTAAACTTAGGAAAACAAAGTTGGACAGCAAATAACTTAAATTATT
TGGCCTAGTGAAGCTTGTATAGTAAAGAGTATTCAACGGATAATCTCCACAGCCGTTCTCTGGACCTTCAAAGTCTCTTACATTCCAGTAGAAAACTCTCTCTGCAAGTCCTTAACTTTGTCCATTCA
TTCCAG

hide sequence


Protein RefSeqs	NP_001121050	(Get FASTA)	NCBI Sequence Viewer
	XP_006241746	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI66852	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011797
	ENSRNOP00000011797.6
	ENSRNOP00000086281
	ENSRNOP00000086281.1

RefSeq Acc Id:

NP_001121050 ⟸ NM_001127578

- UniProtKB:

B2RYP3 (UniProtKB/TrEMBL), F1LSP5 (UniProtKB/TrEMBL), A6HRK4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNIDVEFHIRHNYPWSKLPTNVKQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDERKYYEELLKYSRDHLMLYPYHLSDIMVKGLRITPFSYYTGIMEDIMNSEKSYDSLPNFTAADCLRLLG
IGRNQYIDLMNQCRSSKKFFRRKTAHDLLPMKPVEIAIEAWWVVQAGYITEDDIKICTFPEKSAIDKIIDSGPQLSGSLDYNVVHSLYNKGFIYLDVPISDDSCIAVPPLEGFVMNRVQGDYFETLLY
KIFVSIDEHTNVAELANVLEIDLSLVKNAVSMYCRLGFAHKKGQVINLDQLHSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATDTDTNSQEDPADTASVSSLSLSTGHTKRIAFLFDS
TLTAFLMMGNLSPNLKSHAVTMFEVGKLSDESLDSFLIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKDLVAQTSQPDQSNYGFPLDLLRCESLLGLDPATCSRVLNKNYTLLVSMAPLTNEIR
PVSSCTPQHIGPAIPEVSSVWFKLYIYHITGQGPPSLLLSKGTRLRKLPDIFQGYDRLLITSWGHDPGVVPTSNVLTMLNDALTHSAVLIQGHGLHGVGETVHIPFPFDEAELQGEFTRASMGVHKAL
QILRSKVDLQHFCGYVTMLNASSQLASRKLSDASDERGEPDLASSSDVNGSTESFEMVIEEASTDLSTKQNSGATAEADWVPLELCFGIPLFSSELNRKVCQKIATHGLCSKESLQSLLHSSRKLSLQ
VLNFVHSFQEGAATLDFHAEPGFSSVFSQSSCADTGVPLPAKNVMFKDGILSEWSGRSPSSLLIAGLHLQ

hide sequence

RefSeq Acc Id:	XP_006241746 ⟸ XM_006241684
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GDV8 (UniProtKB/TrEMBL), A6HRK4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNIDVEFHIRHNYPWSKLPTNVKQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDERKYYEELLKYSRDHLMLYPYHLSDIMVKGLRITPFSYYTGIMEDIMNSEKSYDSLPNFTAADCLRLLG IGRNQYIDLMNQCRSSKKFFRRKTAHDLLPMKPVEIAIEAWWVVQAGYITEDDIKICTFPEKSAIDKIIDSGPQLSGSLDYNVVHSLYNKGFIYLDVPISDDSCIAVPPLEGFVMNRVQGDYFETLLY KIFVSIDEHTNVAELANVLEIDLSLVKNAVSMYCRLGFAHKKGQVINLDQLHSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATDTDTNSQEDPADTASVSSLSLSTGHTKRIAFLFDS TLTAFLMMGNLSPNLKSHAVTMFEVGKLSDESLDSFLIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKDLVAQTSQPDQSNYGFPLDLLRCESLLGLDPATCSRVLNKNYTLLVSMAPLTNEIR PVSSCTPQHIGPAIPEVSSVWFKLYIYHITGQGPPSLLLSKGTRLRKLPDIFQGYDRLLITSWGHDPGVVPTSNVLTMLNDALTHSAVLIQGHGLHGVGETVHIPFPFDEAELQGEFTRASMGVHKAL QILRSKVDLQHFCGYVTMLNASSQLASRKLSDASDERGEPDLASSSDVNGSTESFEMVIEEASTDLSTKQNSGATAEADWVPLELCFGIPLFSSELNRKVCQKIATHGLCSKERHDRQV hide sequence

Ensembl Acc Id:

ENSRNOP00000011797 ⟸ ENSRNOT00000011797

Ensembl Acc Id:

ENSRNOP00000086281 ⟸ ENSRNOT00000113149

Protein Domains

FAM91 C-terminal FAM91 N-terminal

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B2RYP3-F1-model_v2	AlphaFold	B2RYP3	1-838	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-33314	BioCyc
Ensembl Genes	ENSRNOG00000008271	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000011797	ENTREZGENE
	ENSRNOT00000011797.8	UniProtKB/TrEMBL
	ENSRNOT00000113149	ENTREZGENE
	ENSRNOT00000113149.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:9092514	IMAGE-MGC_LOAD
InterPro	FAM91	UniProtKB/TrEMBL
	FAM91_C_dom	UniProtKB/TrEMBL
	FAM91_N_dom	UniProtKB/TrEMBL
KEGG Report	rno:689997	UniProtKB/TrEMBL
MGC_CLONE	MGC:188756	IMAGE-MGC_LOAD
NCBI Gene	689997	ENTREZGENE
PANTHER	PROTEIN FAM91A1	UniProtKB/TrEMBL
	PTHR28441	UniProtKB/TrEMBL
Pfam	FAM91_C	UniProtKB/TrEMBL
	FAM91_N	UniProtKB/TrEMBL
PhenoGen	Fam91a1	PhenoGen
RatGTEx	ENSRNOG00000008271	RatGTEx
UniProt	A0A8I6GDV8	ENTREZGENE, UniProtKB/TrEMBL
	A6HRK4	ENTREZGENE, UniProtKB/TrEMBL
	B2RYP3	ENTREZGENE, UniProtKB/TrEMBL
	F1LSP5	ENTREZGENE
UniProt Secondary	F1LSP5	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-05-24	Fam91a1	family with sequence similarity 91, member A1	LOC684063	similar to F33H2.2	Data merged from RGD:1595183	1643240	APPROVED
2008-09-11	Fam91a1	family with sequence similarity 91, member A1	LOC689997	similar to F33H2.2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar