Marveld2 (MARVEL domain containing 2) - Rat Genome Database

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Gene: Marveld2 (MARVEL domain containing 2) Rattus norvegicus
Analyze
Symbol: Marveld2
Name: MARVEL domain containing 2
RGD ID: 1306909
Description: Predicted to be involved in bicellular tight junction assembly and establishment of endothelial barrier. Predicted to act upstream of or within cell-cell junction organization and sensory perception of sound. Predicted to be located in several cellular components, including Schmidt-Lanterman incisure; basolateral plasma membrane; and tight junction. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 49. Orthologous to human MARVELD2 (MARVEL domain containing 2); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC365657; MARVEL (membrane-associating) domain containing 2; MARVEL domain-containing protein 2; Mrvldc2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8233,474,750 - 33,498,225 (-)NCBIGRCr8
mRatBN7.2231,742,652 - 31,764,150 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl231,657,220 - 31,764,150 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx238,877,135 - 38,898,580 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0236,917,467 - 36,939,000 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0231,775,299 - 31,796,859 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0230,612,746 - 30,634,308 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl230,612,106 - 30,634,243 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0249,772,500 - 49,793,880 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4231,403,014 - 31,424,394 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1231,322,975 - 31,340,096 (-)NCBI
Celera227,755,610 - 27,776,847 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Marveld2Ratautosomal recessive nonsyndromic deafness 49  ISOMARVELD2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Marveld2Ratautosomal recessive nonsyndromic deafness 49  ISSMarveld2 (Mus musculus)13592920OMIM:610153MouseDO 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Marveld2Ratautosomal recessive nonsyndromic deafness 49  ISOMARVELD2 (Homo sapiens)7240710 OMIM 

1 to 20 of 58 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Marveld2Rat1,2-dimethylhydrazine increases expressionISOMarveld2 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of MARVELD2 mRNACTDPMID:22206623
Marveld2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOMarveld2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of MARVELD2 mRNACTDPMID:21354282
Marveld2Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOMarveld2 (Mus musculus)6480464[Tetrachlorodibenzodioxin affects the methylation of MARVELD2 intron] which results in increased expression of MARVELD2 mRNACTDPMID:33017471
Marveld2Rat4,4'-sulfonyldiphenol increases expressionISOMarveld2 (Mus musculus)6480464bisphenol S results in increased expression of MARVELD2 mRNACTDPMID:30951980
Marveld2Rat4,4'-sulfonyldiphenol affects methylationISOMarveld2 (Mus musculus)6480464bisphenol S affects the methylation of MARVELD2 geneCTDPMID:31683443
Marveld2Rat4-hydroxyphenyl retinamide increases expressionISOMarveld2 (Mus musculus)6480464Fenretinide results in increased expression of MARVELD2 mRNACTDPMID:28973697
Marveld2Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of MARVELD2 mRNACTDPMID:24780913
Marveld2Ratacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of MARVELD2 mRNACTDPMID:28959563
Marveld2Rataflatoxin B1 decreases expressionISOMARVELD2 (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of MARVELD2 mRNACTDPMID:27153756
Marveld2RatAflatoxin B2 alpha increases methylationISOMARVELD2 (Homo sapiens)6480464aflatoxin B2 results in increased methylation of MARVELD2 intronCTDPMID:30157460
Marveld2Ratall-trans-retinoic acid increases expressionISOMARVELD2 (Homo sapiens)6480464Tretinoin results in increased expression of MARVELD2 mRNACTDPMID:21934132
Marveld2Ratall-trans-retinoic acid multiple interactionsISOMarveld2 (Mus musculus)6480464[mono-(2-ethylhexyl)phthalate co-treated with Tretinoin] results in decreased expression of MARVELD2 mRNACTDPMID:36189433
Marveld2Ratalpha-Zearalanol multiple interactionsEXP 6480464[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of MARVELD2 mRNACTDPMID:35163327
Marveld2Ratantirheumatic drug decreases expressionISOMARVELD2 (Homo sapiens)6480464Antirheumatic Agents results in decreased expression of MARVELD2 mRNACTDPMID:24449571
Marveld2Rataristolochic acid A increases expressionISOMARVELD2 (Homo sapiens)6480464aristolochic acid I results in increased expression of MARVELD2 mRNACTDPMID:33212167
Marveld2Ratbenzo[a]pyrene increases expressionISOMarveld2 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of MARVELD2 mRNACTDPMID:27195522
Marveld2Ratbenzo[a]pyrene decreases methylationISOMARVELD2 (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of MARVELD2 5' UTRCTDPMID:27901495
Marveld2Ratbenzo[b]fluoranthene increases expressionISOMarveld2 (Mus musculus)6480464benzo(b)fluoranthene results in increased expression of MARVELD2 mRNACTDPMID:26377693
Marveld2Ratbeta-lapachone decreases expressionISOMARVELD2 (Homo sapiens)6480464beta-lapachone results in decreased expression of MARVELD2 mRNACTDPMID:38218311
Marveld2Ratbeta-lapachone increases expressionISOMARVELD2 (Homo sapiens)6480464beta-lapachone results in increased expression of MARVELD2 mRNACTDPMID:38218311

1 to 20 of 58 rows

Cellular Component
1 to 13 of 13 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Marveld2Ratapical plasma membrane located_inISOMARVELD2 (Homo sapiens)1624291 PMID:23073616RGDPMID:23073616
Marveld2Ratbasolateral plasma membrane located_inISOMARVELD2 (Homo sapiens)1624291 PMID:23073616RGDPMID:23073616
Marveld2Ratbicellular tight junction located_inISOMARVELD2 (Homo sapiens)1624291 PMID:20164257 and PMID:23073616RGDPMID:20164257 and PMID:23073616
Marveld2Ratbicellular tight junction located_inISOMarveld2 (Mus musculus)1624291 PMID:16365161 more ...RGDPMID:16365161 more ...
Marveld2Ratcell junction located_inISOMARVELD2 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Marveld2Ratcytoplasm located_inISOMARVELD2 (Homo sapiens)1624291 PMID:23073616RGDPMID:23073616
Marveld2Ratcytoplasmic vesicle located_inISOMARVELD2 (Homo sapiens)1624291 PMID:20164257RGDPMID:20164257
Marveld2Ratparanodal junction located_inISOMarveld2 (Mus musculus)1624291 PMID:21097846RGDPMID:21097846
Marveld2RatSchmidt-Lanterman incisure located_inISOMarveld2 (Mus musculus)1624291 PMID:21097846RGDPMID:21097846
Marveld2Rattight junction located_inISOMarveld2 (Mus musculus)1624291 PMID:23239027RGDPMID:23239027
Marveld2Rattight junction located_inISOMARVELD2 (Homo sapiens)1624291 PMID:23239027RGDPMID:23239027
Marveld2Rattricellular tight junction located_inISOMARVELD2 (Homo sapiens)1624291 PMID:28661558RGDPMID:28661558
Marveld2Rattricellular tight junction located_inISOMarveld2 (Mus musculus)1624291 PMID:16365161 more ...RGDPMID:16365161 more ...
1 to 13 of 13 rows

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:16365161   PMID:17186462   PMID:20164257   PMID:21097846   PMID:21245199   PMID:21624353   PMID:23073616   PMID:23250572   PMID:23979167   PMID:24889144   PMID:25975750   PMID:28661558  
PMID:37569268  



Marveld2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8233,474,750 - 33,498,225 (-)NCBIGRCr8
mRatBN7.2231,742,652 - 31,764,150 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl231,657,220 - 31,764,150 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx238,877,135 - 38,898,580 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0236,917,467 - 36,939,000 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0231,775,299 - 31,796,859 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0230,612,746 - 30,634,308 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl230,612,106 - 30,634,243 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0249,772,500 - 49,793,880 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4231,403,014 - 31,424,394 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1231,322,975 - 31,340,096 (-)NCBI
Celera227,755,610 - 27,776,847 (-)NCBICelera
Cytogenetic Map2q12NCBI
MARVELD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38569,415,116 - 69,444,330 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl569,415,065 - 69,444,330 (+)EnsemblGRCh38hg38GRCh38
GRCh37568,710,943 - 68,740,157 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36568,746,699 - 68,775,592 (+)NCBINCBI36Build 36hg18NCBI36
Build 34568,746,698 - 68,775,592NCBI
Celera565,713,884 - 65,740,393 (+)NCBICelera
Cytogenetic Map5q13.2NCBI
HuRef565,667,182 - 65,694,144 (+)NCBIHuRef
CHM1_1568,710,674 - 68,737,631 (+)NCBICHM1_1
T2T-CHM13v2.0570,241,108 - 70,269,905 (+)NCBIT2T-CHM13v2.0
Marveld2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913100,732,465 - 100,753,479 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13100,732,465 - 100,753,479 (-)EnsemblGRCm39 Ensembl
GRCm3813100,595,957 - 100,616,971 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13100,595,957 - 100,616,971 (-)EnsemblGRCm38mm10GRCm38
MGSCv3713101,365,912 - 101,386,926 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613101,696,216 - 101,717,205 (-)NCBIMGSCv36mm8
Celera13104,205,959 - 104,226,958 (-)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1353.23NCBI
Marveld2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955575115,752 - 139,463 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955575115,734 - 135,568 (+)NCBIChiLan1.0ChiLan1.0
MARVELD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2444,475,078 - 44,504,237 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1542,627,667 - 42,658,071 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0544,557,385 - 44,585,868 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1546,128,408 - 46,155,981 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl546,128,408 - 46,155,981 (-)Ensemblpanpan1.1panPan2
MARVELD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1254,438,046 - 54,458,890 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl254,441,797 - 54,457,515 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha251,404,391 - 51,425,210 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0254,949,876 - 54,970,675 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl254,953,611 - 54,969,301 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1252,014,157 - 52,034,938 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0252,780,960 - 52,801,785 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0253,671,348 - 53,692,186 (+)NCBIUU_Cfam_GSD_1.0
Marveld2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213191,254,623 - 191,279,521 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936480190,014 - 216,069 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936480191,526 - 216,163 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MARVELD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1647,530,068 - 47,563,482 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11647,529,857 - 47,563,485 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21651,405,308 - 51,423,813 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.21651,499,084 - 51,505,697 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MARVELD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1465,501,979 - 65,532,345 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl465,506,474 - 65,535,566 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604914,238,514 - 14,269,609 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Marveld2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624905284,356 - 297,865 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624905277,718 - 300,821 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Marveld2
225 total Variants

Predicted Target Of
Summary Value
Count of predictions:21
Count of miRNA genes:21
Interacting mature miRNAs:21
Transcripts:ENSRNOT00000024700
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 35 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22238462767384627Rat
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22997159351729300Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat

1 to 10 of 35 rows
BE101406  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2231,742,170 - 31,742,330 (+)MAPPERmRatBN7.2
Rnor_6.0230,612,265 - 30,612,424NCBIRnor6.0
Rnor_5.0249,772,018 - 49,772,177UniSTSRnor5.0
RGSC_v3.4231,402,532 - 31,402,691UniSTSRGSC3.4
Celera227,755,128 - 27,755,287UniSTS
RH 3.4 Map262.9UniSTS
Cytogenetic Map2q12UniSTS
AU046613  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2231,750,842 - 31,751,014 (+)MAPPERmRatBN7.2
Rnor_6.0230,620,937 - 30,621,108NCBIRnor6.0
Rnor_5.0249,780,574 - 49,780,745UniSTSRnor5.0
RGSC_v3.4231,411,088 - 31,411,259UniSTSRGSC3.4
Celera227,763,839 - 27,764,000UniSTS
Cytogenetic Map2q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000024674   ⟹   ENSRNOP00000024674
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl231,657,220 - 31,707,120 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000077537   ⟹   ENSRNOP00000070680
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl231,742,653 - 31,759,468 (-)Ensembl
Rnor_6.0 Ensembl230,612,747 - 30,634,243 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000084667   ⟹   ENSRNOP00000068691
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl231,657,220 - 31,760,321 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000085488   ⟹   ENSRNOP00000073691
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl231,725,984 - 31,764,150 (-)Ensembl
Rnor_6.0 Ensembl230,612,106 - 30,633,857 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000106737   ⟹   ENSRNOP00000078336
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl231,742,653 - 31,764,002 (-)Ensembl
RefSeq Acc Id: NM_001108936   ⟹   NP_001102406
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8233,476,729 - 33,498,225 (-)NCBI
mRatBN7.2231,742,653 - 31,764,150 (-)NCBI
Rnor_6.0230,612,747 - 30,634,243 (-)NCBI
Rnor_5.0249,772,500 - 49,793,880 (-)NCBI
RGSC_v3.4231,403,014 - 31,424,394 (-)RGD
Celera227,755,610 - 27,776,847 (-)RGD
Sequence:
RefSeq Acc Id: XM_008760679   ⟹   XP_008758901
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8233,474,750 - 33,498,118 (-)NCBI
mRatBN7.2231,742,652 - 31,764,011 (-)NCBI
Rnor_6.0230,612,746 - 30,633,894 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008760680   ⟹   XP_008758902
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8233,474,750 - 33,498,220 (-)NCBI
mRatBN7.2231,742,652 - 31,764,120 (-)NCBI
Rnor_6.0230,612,746 - 30,634,308 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008760681   ⟹   XP_008758903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8233,474,750 - 33,497,782 (-)NCBI
mRatBN7.2231,742,652 - 31,763,675 (-)NCBI
Rnor_6.0230,612,746 - 30,633,783 (-)NCBI
Sequence:
Protein RefSeqs NP_001102406 (Get FASTA)   NCBI Sequence Viewer  
  XP_008758901 (Get FASTA)   NCBI Sequence Viewer  
  XP_008758902 (Get FASTA)   NCBI Sequence Viewer  
  XP_008758903 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM10203 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000070680.1
  ENSRNOP00000073691.2
  ENSRNOP00000078336.1
RefSeq Acc Id: NP_001102406   ⟸   NM_001108936
- UniProtKB: A0A0G2JYJ6 (UniProtKB/TrEMBL),   A6I595 (UniProtKB/TrEMBL),   A0A0G2K663 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008758902   ⟸   XM_008760680
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K663 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008758901   ⟸   XM_008760679
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K663 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008758903   ⟸   XM_008760681
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K663 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000073691   ⟸   ENSRNOT00000085488
MARVEL   OCEL

Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K663-F1-model_v2 AlphaFold A0A0G2K663 1-559 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13691109
Promoter ID:EPDNEW_R1630
Type:single initiation site
Name:Marveld2_1
Description:MARVEL domain containing 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0230,633,888 - 30,633,948EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-54659 BioCyc
Ensembl Genes ENSRNOG00000018297 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000052167 Ensembl
Ensembl Transcript ENSRNOT00000077537.2 UniProtKB/TrEMBL
  ENSRNOT00000085488.2 UniProtKB/TrEMBL
  ENSRNOT00000106737.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.340 UniProtKB/TrEMBL
InterPro ELL/occludin UniProtKB/TrEMBL
  Marvel UniProtKB/TrEMBL
  Occludin_RNApol2_elong_fac_ELL UniProtKB/TrEMBL
KEGG Report rno:365657 UniProtKB/TrEMBL
NCBI Gene 365657 ENTREZGENE
PANTHER PTHR23288 UniProtKB/TrEMBL
  PTHR23288:SF3 UniProtKB/TrEMBL
Pfam MARVEL UniProtKB/TrEMBL
  Occludin_ELL UniProtKB/TrEMBL
PhenoGen Marveld2 PhenoGen
PROSITE MARVEL UniProtKB/TrEMBL
  OCEL UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018297 RatGTEx
  ENSRNOG00000052167 RatGTEx
Superfamily-SCOP occludin/ELL-like UniProtKB/TrEMBL
UniProt A0A0G2JYJ6 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2K663 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZKQ0_RAT UniProtKB/TrEMBL
  A6I595 ENTREZGENE, UniProtKB/TrEMBL
1 to 26 of 26 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-24 Marveld2  MARVEL domain containing 2  Marveld2  MARVEL (membrane-associating) domain containing 2   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Marveld2  MARVEL (membrane-associating) domain containing 2   Marveld2_predicted  MARVEL (membrane-associating) domain containing 2 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Marveld2_predicted  MARVEL (membrane-associating) domain containing 2 (predicted)  Mrvldc2_predicted    Symbol updated 1299863 APPROVED
2005-01-12 Mrvldc2_predicted  MARVEL (membrane-associating) domain containing 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED