MARVELD2 (MARVEL domain containing 2)

Gene: MARVELD2 (MARVEL domain containing 2) Pan paniscus

Analyze

Symbol:

MARVELD2

Name:

MARVEL domain containing 2

RGD ID:

11691378

Description:

INVOLVED IN cell-cell junction organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 49 (ortholog); Deafness (ortholog); FOUND IN anchoring junction (inferred); apical plasma membrane (inferred); basolateral plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

MARVEL domain-containing protein 2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	44,475,078 - 44,504,237 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	42,627,667 - 42,658,071 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	44,557,385 - 44,585,868 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	46,128,408 - 46,155,981 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	46,128,408 - 46,155,981 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive nonsyndromic deafness (ISO)

autosomal recessive nonsyndromic deafness 49 (ISO)

Deafness (ISO)

genetic disease (ISO)

Hearing Loss (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bicellular tight junction assembly (IEA)

cell-cell junction organization (IEA,ISO)

establishment of endothelial barrier (IEA)

sensory perception of sound (IEA,ISO)

Cellular Component

anchoring junction (IEA)

apical plasma membrane (IEA)

basolateral plasma membrane (IEA)

bicellular tight junction (IEA)

cell junction (IEA)

cytoplasm (IEA)

cytoplasmic vesicle (IEA)

membrane (IEA)

paranodal junction (IEA)

plasma membrane (IEA)

Schmidt-Lanterman incisure (IEA)

tight junction (IEA)

tricellular tight junction (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

MARVELD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	44,475,078 - 44,504,237 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	42,627,667 - 42,658,071 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	44,557,385 - 44,585,868 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	46,128,408 - 46,155,981 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	46,128,408 - 46,155,981 (-)	Ensembl	panpan1.1		panPan2

MARVELD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	69,415,116 - 69,444,330 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	69,415,065 - 69,444,330 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	68,710,943 - 68,740,157 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	68,746,699 - 68,775,592 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	68,746,698 - 68,775,592	NCBI
Celera	5	65,713,884 - 65,740,393 (+)	NCBI		Celera
Cytogenetic Map	5	q13.2	NCBI
HuRef	5	65,667,182 - 65,694,144 (+)	NCBI		HuRef
CHM1_1	5	68,710,674 - 68,737,631 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	70,241,108 - 70,269,905 (+)	NCBI		T2T-CHM13v2.0

Marveld2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	100,732,465 - 100,753,479 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	100,732,465 - 100,753,479 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	100,595,957 - 100,616,971 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	100,595,957 - 100,616,971 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	101,365,912 - 101,386,926 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	101,696,216 - 101,717,205 (-)	NCBI		MGSCv36	mm8
Celera	13	104,205,959 - 104,226,958 (-)	NCBI		Celera
Cytogenetic Map	13	D1	NCBI
cM Map	13	53.23	NCBI

Marveld2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	33,474,750 - 33,498,225 (-)	NCBI		GRCr8
mRatBN7.2	2	31,742,652 - 31,764,150 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	31,657,220 - 31,764,150 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	38,877,135 - 38,898,580 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	36,917,467 - 36,939,000 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	31,775,299 - 31,796,859 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	30,612,746 - 30,634,308 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	30,612,106 - 30,634,243 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	49,772,500 - 49,793,880 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	31,403,014 - 31,424,394 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	31,322,975 - 31,340,096 (-)	NCBI
Celera	2	27,755,610 - 27,776,847 (-)	NCBI		Celera
Cytogenetic Map	2	q12	NCBI

Marveld2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955575	115,752 - 139,463 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955575	115,734 - 135,568 (+)	NCBI	ChiLan1.0	ChiLan1.0

MARVELD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	54,438,046 - 54,458,890 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	54,441,797 - 54,457,515 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	51,404,391 - 51,425,210 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	54,949,876 - 54,970,675 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	54,953,611 - 54,969,301 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	52,014,157 - 52,034,938 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	52,780,960 - 52,801,785 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	53,671,348 - 53,692,186 (+)	NCBI		UU_Cfam_GSD_1.0

Marveld2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	191,254,623 - 191,279,521 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936480	190,014 - 216,069 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936480	191,526 - 216,163 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MARVELD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	47,530,068 - 47,563,482 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	47,529,857 - 47,563,485 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	51,405,308 - 51,423,813 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	16	51,499,084 - 51,505,697 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MARVELD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	65,501,979 - 65,532,345 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	65,506,474 - 65,535,566 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666049	14,238,514 - 14,269,609 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Marveld2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624905	284,356 - 297,865 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624905	277,718 - 300,821 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003806783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003806784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008957358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034959998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000039462 ⟹ ENSPPAP00000016764

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	46,128,408 - 46,155,797 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000039464 ⟹ ENSPPAP00000016766

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	46,129,280 - 46,155,981 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000039470 ⟹ ENSPPAP00000016772

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	46,129,689 - 46,151,265 (-)	Ensembl

RefSeq Acc Id:

XM_003806783 ⟹ XP_003806831

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	44,475,078 - 44,504,237 (-)	NCBI
NHGRI_mPanPan1	5	42,627,667 - 42,658,071 (-)	NCBI
Mhudiblu_PPA_v0	5	44,558,257 - 44,585,868 (-)	NCBI
PanPan1.1	5	46,129,280 - 46,155,981 (-)	NCBI

Sequence:

show sequence

GCCCGATACCGGTTTCAGAGTCCTGGGCGGCGTGCGCGCTCTTCCTGGCGGCTGCGCAGGTGTG
AAAATCACAAATGTCGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACGATGAGGTC
CCAAGCGACCTGCCCTATCAAGATAGCACCATAAGAACCCACCCAACTCTTCATGACAGTGAGC
GGGCAGTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCATTACAGCCACCATTCGGCCCAGA
CTTCTACTCAAGTGACACAGAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTTT
GTCCCTGACTCCTGGAAGAACTTTTTCAGAGGGAAGAAAAAGGACCCCGAATGGGATAAGCCGG
TGTCTGATATCAGGTACATCTCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCAGCAAGACC
GAACCACCGTTCGCCCCCCAACTCCTGCAAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGT
TCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGATCCCTATGGATCTCTAGACCGACACACAC
AAACAGTTCGAACATACAGTGAGAAGGTGGAGGAGTATAACCTGAGATACTCCTACATGAAGTC
GTGGGCAGGCCTGCTGAGAATACTGGGTGTGGTGGAGCTGCTTTTGGGGGCCGGTGTCTTTGCT
TGTGTCACAGCTTACATTCACAAGGACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCAT
ATGGCATGGGAGGCGTTGGTGGACTGGGCAGTATGTATGGGGGCTATTACTACACTGGCCCTAA
GACCCCTTTTGTACTCGTGGTTGCTGGATTAGCTTGGATCACCACCATTATTATTCTGGTTCTT
GGCATGTCCATGTATTACCGGACCATTCTTCTGGACTCTAATTGGTGGCCCCTAACTGAATTTG
GAATTAACGTTGCCTTGTTTATTTTGTATATGGCCGCAGCCATAGTCTATGTGAATGATACCAA
CAGAGGTGGCCTCTGCTACTATCCGTTATTTAATACACCAGTGAATGCAGTGTTCTGCCGGGTA
GAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTTGTCACCATGATAGTGTATCTCATTAGTG
CTTTGGTTTGCCTAAAGTTATGGAGGCATGAGGCAGCTCGGAGACATAGAGAATATATGGAACA
ACAGGAGATAAATGAGCCATCATTGTCATCGAAAAGGAAAATGTGTGAAATGGCCACCAGTGGT
GACAGACAAAGAGACTCAGAAGTTAATTTCAAGGAACTGAGAACAGCAAAAATGAAACCTGAAC
TACTGAGTGGACACATCCCCCCAGGCCACATTCCTAAACCTATCGTGATGCCCGACTATGTGGC
AAAATACCCTGTGATTCAGACAGATGATGAGCGAGAACGCTATAAAGCTGTGTTCCAAGACCAG
TTTTCAGAGTACAAAGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAAGTTTGATGAGCTGG
ATGCAGTGATGAGCAGATTGCCACATCATTCGGAAAGCCGACAGGAACATGAGAGAATTTCAAG
AATCCATGAAGAGTTTAAGAAAAAAAAGAATGATCCTACATTTCTGGAAAAAAAAGAACGCTGT
GATTACCTAAAGAATAAACTTTCTCACATAAAGCAAAGAATTCAAGAATATGATAAAGTAATGA
ATTGGGATGTACAAGGTTATTCTTAACCCTTATTTGAAACCACTTTATTTTTTTATTTTATTTT
ATTTTTTTGAGATGAAGTCTCTCTCTGTTACCCAGGCTGGAATGCAGTGGCACAATCTCGGCTC
ACTGCAACTTCCACCTCCCGGGTTCAAGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAG
CTGGGATTACAGGCGTGCGCTGCCACACCCCGCTAATTTTTGTATTTTTAGTAGAGACGAGGTT
TCACCATGTTGGTCAGGCTGGGAAACTACTTTTTTAAAAAAATAGCAAGTTTACTATTTATTTA
CTGCCTTTTTAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG
GTTTAACCAGTGTGCAACATTAAAGATTTTACTCAGACATTTTTAAACGAA

hide sequence

RefSeq Acc Id:

XM_008957358 ⟹ XP_008955606

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	44,475,078 - 44,504,038 (-)	NCBI
NHGRI_mPanPan1	5	42,627,667 - 42,657,717 (-)	NCBI
Mhudiblu_PPA_v0	5	44,558,531 - 44,585,075 (-)	NCBI
PanPan1.1	5	46,128,408 - 46,155,797 (-)	NCBI

Sequence:

show sequence

CCGGAGCCAGGGAGGGATCCGGGGAGGCCCGCGTCCCGCCAGGTTTCGCTCTGCGGACGCAGGT
GCGGCCGAGCCGCCGTCCTTCCGGGCGCGGGCGGGGCGCGCACCTCGGGGCGATCCCGGTGCTC
CTTACCTGGGAGGTCTCCCGGCTTAGTTTCGGCCTCGTTGGGGCGGAATCTCCAAAGACAGTGG
GTTTCAGCCAGAAACGCGAAGACGAACGCCTTGCTGGCGCGGGCAGAAGCGAGGACACAATGAG
ATTTGTGGGACCGGGCGCCCAGAGGCTGGCGCGGGGGAGACCCCACAGCGAAAATGCTCGGTAC
CCCCGGGCAGTCGTGGGTTAGTTAGAACCGCGAGCCTTTCCCGACCCCTAGGAAGCGCAGAAGT
ATCCGAAATCTACCCGTTTCTTAGGTCCAGCAAAACTTTTAAGCCAGGTGTGAAAATCACAAAT
GTCGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTG
CCCTATCAAGATAGCACCATAAGAACCCACCCAACTCTTCATGACAGTGAGCGGGCAGTGAGCG
CTGATCCCTTGCCACCACCCCCTCTCCCATTACAGCCACCATTCGGCCCAGACTTCTACTCAAG
TGACACAGAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTCCCTGACTCC
TGGAAGAACTTTTTCAGAGGGAAGAAAAAGGACCCCGAATGGGATAAGCCGGTGTCTGATATCA
GGTACATCTCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCAGCAAGACCGAACCACCGTTC
GCCCCCCAACTCCTGCAAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGTTCCCGGAAAGAG
GCTGACGCAGTGTTTCCCCGGGATCCCTATGGATCTCTAGACCGACACACACAAACAGTTCGAA
CATACAGTGAGAAGGTGGAGGAGTATAACCTGAGATACTCCTACATGAAGTCGTGGGCAGGCCT
GCTGAGAATACTGGGTGTGGTGGAGCTGCTTTTGGGGGCCGGTGTCTTTGCTTGTGTCACAGCT
TACATTCACAAGGACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCATATGGCATGGGAG
GCGTTGGTGGACTGGGCAGTATGTATGGGGGCTATTACTACACTGGCCCTAAGACCCCTTTTGT
ACTCGTGGTTGCTGGATTAGCTTGGATCACCACCATTATTATTCTGGTTCTTGGCATGTCCATG
TATTACCGGACCATTCTTCTGGACTCTAATTGGTGGCCCCTAACTGAATTTGGAATTAACGTTG
CCTTGTTTATTTTGTATATGGCCGCAGCCATAGTCTATGTGAATGATACCAACAGAGGTGGCCT
CTGCTACTATCCGTTATTTAATACACCAGTGAATGCAGTGTTCTGCCGGGTAGAAGGAGGACAG
ATAGCTGCAATGATCTTCCTGTTTGTCACCATGATAGTGTATCTCATTAGTGCTTTGGTTTGCC
TAAAGTTATGGAGGCATGAGGCAGCTCGGAGACATAGAGAATATATGGAACAACAGGAGATAAA
TGAGCCATCATTGTCATCGAAAAGGAAAATGTGTGAAATGGCCACCAGTGGTGACAGACAAAGA
GACTCAGAAGTTAATTTCAAGGAACTGAGAACAGCAAAAATGAAACCTGAACTACTGAGTGGAC
ACATCCCCCCAGGCCACATTCCTAAACCTATCGTGATGCCCGACTATGTGGCAAAATACCCTGT
GATTCAGACAGATGATGAGCGAGAACGCTATAAAGCTGTGTTCCAAGACCAGTTTTCAGAGTAC
AAAGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAAGTTTGATGAGCTGGATGCAGTGATGA
GCAGATTGCCACATCATTCGGAAAGCCGACAGGAACATGAGAGAATTTCAAGAATCCATGAAGA
GTTTAAGAAAAAAAAGAATGATCCTACATTTCTGGAAAAAAAAGAACGCTGTGATTACCTAAAG
AATAAACTTTCTCACATAAAGCAAAGAATTCAAGAATATGATAAAGTAATGAATTGGGATGTAC
AAGGTTATTCTTAACCCTTATTTGAAACCACTTTATTTTTTTATTTTATTTTATTTTTTTGAGA
TGAAGTCTCTCTCTGTTACCCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACTGCAACTTCC
ACCTCCCGGGTTCAAGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAG
GCGTGCGCTGCCACACCCCGCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTGG
TCAGGCTGGGAAACTACTTTTTTAAAAAAATAGCAAGTTTACTATTTATTTACTGCCTTTTTAA
TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTG
TGCAACATTAAAGATTTTACTCAGACATTTTTAAACGAATTCAAATGTTCTAAGGGCCTTTACT
AAGAATGGAAAAAATCCTGTGTTCATCTTTCATCTGTGACCAATTTCAAATTCATCTATCTCAT
TTAAATGTGTCATCATTTTAGAGATCGTATCCTGGCAGTGTGATGGGCAAGTGGACCATCAATT
CTGGTGCTACTTTTTCCTTTTTTACTCAGGCAGGTTCCTAGGATTTTTCTGGGACAAATTTCTC
TTCCTAGAGAAATTCCTAGGGGATTTCTAAAGGATTTTTCTAAGGGAAAAAGGGTGACATCTTT
CAAAGGTGTCATTTATTCCCTTGAAAGGTGTTTGAATCCCAGATCAACATTTTCAGACATCCTG
ATCTTGGGCAAATTGCTTAATCTCTCTGTGCCTGTTTCCTCTTCTGTAAAATGGGGCTAATAAT
AGTCCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACTAATATGGTAGGAACTATATTAGT
GTTTGTGAAGTCTACTGAAGTGTTTGTGAAATGAATAAATTATAAAGAATGAGTCTCAAGAAAA
GGTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAAGCTCAAGTGTCTGGTGCCTTTCTGGTT
TGTGGTGTTAACTCATGGCCTTAGCCTGGTGCTTCACTGTGGCTCTGTGGCCCCTGGGGTTCCA
CATGGCCTCCCTGTCTTTCATCAGTGTGACTGTACATCTCTCCATCTCCCCATAGTCCAGCCTG
CCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTTTTTTTTTTTTTGAGACAGAGTCTTA
CTCTGTTGCCCAGACTGTAGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGG
TTCACGTCATTTTCC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003806831	(Get FASTA)	NCBI Sequence Viewer
	XP_008955606	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000016764
	ENSPPAP00000016764.1
	ENSPPAP00000016766.1
	ENSPPAP00000016772.1

RefSeq Acc Id:

XP_008955606 ⟸ XM_008957358

- UniProtKB:

A0A2R9APH4 (UniProtKB/TrEMBL), A0A2R9AHD4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSNDGRSRNRDRRYDEVPSDLPYQDSTIRTHPTLHDSERAVSADPLPPPPLPLQPPFGPDFYS
SDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPASPARPNHR
SPPNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYNLRYSYMKSWAG
LLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLGSMYGGYYYTGPKTPF
VLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGG
LCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWRHEAARRHREYMEQQEI
NEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPELLSGHIPPGHIPKPIVMPDYVAKYP
VIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSRLPHHSESRQEHERISRIHE
EFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYDKVMNWDVQGYS

hide sequence

RefSeq Acc Id:

XP_003806831 ⟸ XM_003806783

- UniProtKB:

A0A2R9APH4 (UniProtKB/TrEMBL), A0A2R9AHD4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSNDGRSRNRDRRYDEVPSDLPYQDSTIRTHPTLHDSERAVSADPLPPPPLPLQPPFGPDFYS
SDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPASPARPNHR
SPPNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYNLRYSYMKSWAG
LLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLGSMYGGYYYTGPKTPF
VLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGG
LCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWRHEAARRHREYMEQQEI
NEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPELLSGHIPPGHIPKPIVMPDYVAKYP
VIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSRLPHHSESRQEHERISRIHE
EFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYDKVMNWDVQGYS

hide sequence

RefSeq Acc Id:

ENSPPAP00000016772 ⟸ ENSPPAT00000039470

RefSeq Acc Id:

ENSPPAP00000016766 ⟸ ENSPPAT00000039464

RefSeq Acc Id:

ENSPPAP00000016764 ⟸ ENSPPAT00000039462

Protein Domains

MARVEL OCEL

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000031481	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000039462.1	UniProtKB/TrEMBL
	ENSPPAT00000039464.1	UniProtKB/TrEMBL
	ENSPPAT00000039470.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.340	UniProtKB/TrEMBL
InterPro	ELL/occludin	UniProtKB/TrEMBL
	Marvel	UniProtKB/TrEMBL
	Occludin_ELL	UniProtKB/TrEMBL
KEGG Report	pps:100988729	UniProtKB/TrEMBL
NCBI Gene	MARVELD2	ENTREZGENE
PANTHER	PTHR23288	UniProtKB/TrEMBL
	PTHR23288:SF3	UniProtKB/TrEMBL
Pfam	MARVEL	UniProtKB/TrEMBL
	Occludin_ELL	UniProtKB/TrEMBL
PROSITE	MARVEL	UniProtKB/TrEMBL
	OCEL	UniProtKB/TrEMBL
Superfamily-SCOP	occludin/ELL-like	UniProtKB/TrEMBL
UniProt	A0A2R9AHD4	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9AHE7_PANPA	UniProtKB/TrEMBL
	A0A2R9APH4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM