Rev1 (REV1, DNA directed polymerase) - Rat Genome Database

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Gene: Rev1 (REV1, DNA directed polymerase) Rattus norvegicus
Analyze
Symbol: Rev1
Name: REV1, DNA directed polymerase
RGD ID: 1306715
Description: Predicted to enable DNA-directed DNA polymerase activity and deoxycytidyl transferase activity. Predicted to be involved in error-free translesion synthesis; error-prone translesion synthesis; and response to UV. Predicted to be located in nucleus. Orthologous to human REV1 (REV1 DNA directed polymerase); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DNA repair protein REV1; LOC316344; REV1 homolog; REV1 homolog (S. cerevisiae); REV1, polymerase (DNA directed); REV1-like; REV1-like (S. cerevisiae); Rev1l
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8947,773,907 - 47,847,554 (-)NCBIGRCr8
mRatBN7.2940,278,100 - 40,351,764 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl940,278,101 - 40,351,576 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx948,773,815 - 48,846,572 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0953,896,577 - 53,969,330 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0952,178,823 - 52,252,241 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0944,714,137 - 44,786,330 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl944,714,386 - 44,786,041 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0944,410,205 - 44,481,659 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4936,994,269 - 37,042,663 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1936,995,974 - 37,069,555 (-)NCBI
Celera938,030,447 - 38,078,175 (-)NCBICelera
Cytogenetic Map9q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 97 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rev1Rat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of REV1 mRNA]CTDPMID:31150632
Rev1Rat(-)-demecolcine decreases expressionISOREV1 (Homo sapiens)6480464Demecolcine results in decreased expression of REV1 mRNACTDPMID:23649840
Rev1Rat1,2-dimethylhydrazine decreases expressionISORev1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of REV1 mRNACTDPMID:22206623
Rev1Rat17alpha-ethynylestradiol multiple interactionsISORev1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of REV1 mRNACTDPMID:17942748
Rev1Rat17beta-estradiol decreases expressionISORev1 (Mus musculus)6480464Estradiol results in decreased expression of REV1 mRNACTDPMID:39298647
Rev1Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of REV1 mRNACTDPMID:35192832
Rev1Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORev1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of REV1 mRNACTDPMID:17942748
Rev1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of REV1 mRNACTDPMID:33387578
Rev1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORev1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of REV1 mRNACTDPMID:21570461
Rev1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISORev1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of REV1 mRNACTDPMID:21354282 and PMID:28922406
Rev1Rat3H-1,2-dithiole-3-thione decreases expressionEXP 64804641 and 2-dithiol-3-thione results in decreased expression of REV1 mRNACTDPMID:19162173
Rev1Rat4,4'-diaminodiphenylmethane decreases expressionISORev1 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of REV1 mRNACTDPMID:18648102
Rev1Rat4,4'-sulfonyldiphenol decreases expressionISORev1 (Mus musculus)6480464bisphenol S results in decreased expression of REV1 mRNACTDPMID:39298647
Rev1Rat4,4'-sulfonyldiphenol decreases methylationISOREV1 (Homo sapiens)6480464bisphenol S results in decreased methylation of REV1 geneCTDPMID:31601247
Rev1Rat4-hydroxynon-2-enal multiple interactionsISORev1 (Mus musculus)6480464REV1 protein affects the reaction [4-hydroxy-2-nonenal results in increased phosphorylation of H2AX protein]CTDPMID:22331492
Rev1Rat4-hydroxynon-2-enal affects response to substanceISORev1 (Mus musculus)6480464REV1 protein affects the susceptibility to 4-hydroxy-2-nonenalCTDPMID:22331492
Rev1Rat5-fluorouracil affects expressionISOREV1 (Homo sapiens)6480464Fluorouracil affects the expression of REV1 mRNACTDPMID:16584549
Rev1Ratacrylamide increases expressionEXP 6480464Acrylamide results in increased expression of REV1 mRNACTDPMID:28959563
Rev1Rataflatoxin B1 increases expressionISORev1 (Mus musculus)6480464Aflatoxin B1 results in increased expression of REV1 mRNACTDPMID:19770486
Rev1Rataflatoxin B1 decreases methylationISOREV1 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of REV1 geneCTDPMID:27153756

1 to 20 of 97 rows

Biological Process
1 to 13 of 13 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rev1RatDNA biosynthetic process involved_inIEAUniProtKB-KW:KW-02371600115GO_REF:0000043UniProtGO_REF:0000043
Rev1RatDNA damage response involved_inIEAUniProtKB-KW:KW-02271600115GO_REF:0000043UniProtGO_REF:0000043
Rev1RatDNA metabolic process involved_inIEAARBA:ARBA000288391600115GO_REF:0000117UniProtGO_REF:0000117
Rev1RatDNA repair involved_inISOREV1 (Homo sapiens)1624291 PMID:21926160RGDPMID:21926160
Rev1RatDNA repair involved_inIEAUniProtKB-KW:KW-02341600115GO_REF:0000043UniProtGO_REF:0000043
Rev1RatDNA repair involved_inIEAInterPro:IPR001126 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Rev1Raterror-free translesion synthesis involved_inIBAPANTHER:PTN000117973 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Rev1Raterror-prone translesion synthesis involved_inIEAInterPro:IPR0121121600115GO_REF:0000002InterProGO_REF:0000002
Rev1Raterror-prone translesion synthesis acts_upstream_of_or_withinIEAUniProtKB:Q920Q2 and ensembl:ENSMUSP000000272511600115GO_REF:0000107EnsemblGO_REF:0000107
Rev1Raterror-prone translesion synthesis acts_upstream_of_or_withinISORev1 (Mus musculus)1624291 PMID:11711549RGDPMID:11711549
Rev1Raterror-prone translesion synthesis involved_inIBAMGI:1929074 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Rev1Ratresponse to UV involved_inISOREV1 (Homo sapiens)1624291 PMID:11485998RGDPMID:11485998
Rev1Ratresponse to UV involved_inIEAUniProtKB:Q9UBZ9 and ensembl:ENSP000002584281600115GO_REF:0000107EnsemblGO_REF:0000107
1 to 13 of 13 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rev1Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
Rev1Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rev1Ratdamaged DNA binding enablesIEAUniRule:UR0001684641600115GO_REF:0000104UniProtGO_REF:0000104
Rev1Ratdamaged DNA binding enablesIEAInterPro:IPR012112 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Rev1Ratdeoxycytidyl transferase activity enablesIEAUniProtKB:Q920Q2 and ensembl:ENSMUSP000000272511600115GO_REF:0000107EnsemblGO_REF:0000107
Rev1Ratdeoxycytidyl transferase activity enablesISORev1 (Mus musculus)1624291 PMID:11711549RGDPMID:11711549
Rev1Ratdeoxycytidyl transferase activity enablesIBAMGI:1929074 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Rev1RatDNA binding enablesIEAUniProtKB-KW:KW-02381600115GO_REF:0000043UniProtGO_REF:0000043
Rev1RatDNA-directed DNA polymerase activity enablesIEAInterPro:IPR0538481600115GO_REF:0000002InterProGO_REF:0000002
Rev1RatDNA-directed DNA polymerase activity enablesIBAPANTHER:PTN000117973 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Rev1Ratmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
Rev1Ratnucleotidyltransferase activity enablesIEAUniProtKB-KW:KW-05481600115GO_REF:0000043UniProtGO_REF:0000043
Rev1Ratnucleotidyltransferase activity enablesIEAInterPro:IPR0121121600115GO_REF:0000002InterProGO_REF:0000002
Rev1Ratprotein binding enablesISORev1 (Mus musculus)1624291UniProtKB:Q6NZ36-1 and PMID:22266823RGDPMID:22266823
Rev1Ratprotein binding enablesISOREV1 (Homo sapiens)1624291UniProtKB:Q6NZ36 more ...RGDPMID:11485998 more ...
Rev1Rattransferase activity enablesIEAUniProtKB-KW:KW-08081600115GO_REF:0000043UniProtGO_REF:0000043
1 to 14 of 14 rows


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:11485998   PMID:11711549  



Rev1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8947,773,907 - 47,847,554 (-)NCBIGRCr8
mRatBN7.2940,278,100 - 40,351,764 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl940,278,101 - 40,351,576 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx948,773,815 - 48,846,572 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0953,896,577 - 53,969,330 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0952,178,823 - 52,252,241 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0944,714,137 - 44,786,330 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl944,714,386 - 44,786,041 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0944,410,205 - 44,481,659 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4936,994,269 - 37,042,663 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1936,995,974 - 37,069,555 (-)NCBI
Celera938,030,447 - 38,078,175 (-)NCBICelera
Cytogenetic Map9q21NCBI
REV1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38299,400,477 - 99,490,202 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl299,400,475 - 99,490,035 (-)EnsemblGRCh38hg38GRCh38
GRCh372100,016,940 - 100,106,479 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36299,383,370 - 99,472,912 (-)NCBINCBI36Build 36hg18NCBI36
Build 34299,475,931 - 99,564,998NCBI
Celera294,221,622 - 94,311,168 (-)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef293,782,782 - 93,847,070 (-)NCBIHuRef
CHM1_12100,021,704 - 100,109,885 (-)NCBICHM1_1
T2T-CHM13v2.0299,859,127 - 99,948,858 (-)NCBIT2T-CHM13v2.0
Rev1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39138,091,867 - 38,169,191 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl138,091,867 - 38,168,882 (-)EnsemblGRCm39 Ensembl
GRCm38138,052,786 - 38,129,921 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl138,052,786 - 38,129,801 (-)EnsemblGRCm38mm10GRCm38
MGSCv37138,109,631 - 38,186,507 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36137,997,332 - 38,074,208 (-)NCBIMGSCv36mm8
Celera137,830,205 - 37,907,067 (-)NCBICelera
Cytogenetic Map1BNCBI
cM Map116.46NCBI
Rev1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554705,677,222 - 5,738,362 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554705,677,222 - 5,738,362 (-)NCBIChiLan1.0ChiLan1.0
REV1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21228,941,164 - 29,030,665 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A28,943,931 - 29,033,425 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A99,808,519 - 99,897,989 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A100,329,475 - 100,418,684 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A100,329,475 - 100,418,678 (-)Ensemblpanpan1.1panPan2
REV1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11043,150,885 - 43,247,324 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1042,586,394 - 43,247,328 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1043,074,777 - 43,171,213 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01044,020,399 - 44,116,914 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1044,020,389 - 44,116,904 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11043,733,744 - 43,830,134 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01044,016,125 - 44,112,521 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01044,198,477 - 44,294,929 (+)NCBIUU_Cfam_GSD_1.0
Rev1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629285,171,516 - 85,246,570 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366611,333,577 - 1,398,227 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366611,322,907 - 1,397,990 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
REV1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1143,128,824 - 3,218,894 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl143,129,529 - 3,218,866 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041170,730,018 - 170,820,108 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rev1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247494,372,256 - 4,453,431 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247494,374,345 - 4,453,374 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Rev1
374 total Variants

Predicted Target Of
Summary Value
Count of predictions:403
Count of miRNA genes:236
Interacting mature miRNAs:283
Transcripts:ENSRNOT00000067197
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 32 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat

1 to 10 of 32 rows
BF389054  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2940,279,215 - 40,279,349 (+)MAPPERmRatBN7.2
Rnor_6.0944,715,252 - 44,715,385NCBIRnor6.0
Rnor_5.0944,411,321 - 44,411,454UniSTSRnor5.0
RGSC_v3.4936,995,384 - 36,995,517UniSTSRGSC3.4
Celera938,031,562 - 38,031,695UniSTS
RH 3.4 Map9371.6UniSTS
Cytogenetic Map9q21UniSTS
BF403627  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2940,399,302 - 40,399,481 (+)MAPPERmRatBN7.2
Rnor_6.0944,834,959 - 44,835,137NCBIRnor6.0
Rnor_5.0944,530,584 - 44,530,762UniSTSRnor5.0
RGSC_v3.4937,116,258 - 37,116,436UniSTSRGSC3.4
Celera938,151,544 - 38,151,722UniSTS
RH 3.4 Map9375.8UniSTS
Cytogenetic Map9q21UniSTS
BF403788  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2940,307,125 - 40,307,276 (+)MAPPERmRatBN7.2
Rnor_6.0944,743,162 - 44,743,312NCBIRnor6.0
Rnor_5.0944,439,231 - 44,439,381UniSTSRnor5.0
RGSC_v3.4937,023,294 - 37,023,444UniSTSRGSC3.4
Celera938,059,472 - 38,059,622UniSTS
RH 3.4 Map9379.6UniSTS
Cytogenetic Map9q21UniSTS
RH140965  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2940,402,397 - 40,402,582 (+)MAPPERmRatBN7.2
Rnor_6.0944,838,054 - 44,838,238NCBIRnor6.0
Rnor_5.0944,533,679 - 44,533,863UniSTSRnor5.0
RGSC_v3.4937,119,353 - 37,119,537UniSTSRGSC3.4
Celera938,154,639 - 38,154,823UniSTS
RH 3.4 Map9373.3UniSTS
Cytogenetic Map9q21UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 22 of 22 rows
RefSeq Transcripts NM_001394129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_172081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006244819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006244820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006244821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039083576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039083577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039083578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039083579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039083580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063267161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010054595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 22 of 22 rows

Ensembl Acc Id: ENSRNOT00000067197   ⟹   ENSRNOP00000059807
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl940,278,105 - 40,351,388 (-)Ensembl
Rnor_6.0 Ensembl944,714,386 - 44,786,041 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111097   ⟹   ENSRNOP00000076682
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl940,278,101 - 40,351,576 (-)Ensembl
RefSeq Acc Id: NM_001394129   ⟹   NP_001381058
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,847,327 (-)NCBI
mRatBN7.2940,278,100 - 40,351,520 (-)NCBI
RefSeq Acc Id: NR_172081
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,821,636 (-)NCBI
mRatBN7.2940,278,100 - 40,325,829 (-)NCBI
RefSeq Acc Id: XM_008767030   ⟹   XP_008765252
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,806,596 (-)NCBI
mRatBN7.2940,278,100 - 40,310,789 (-)NCBI
Rnor_6.0944,714,138 - 44,746,988 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596444   ⟹   XP_017451933
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,796,978 (-)NCBI
mRatBN7.2940,278,100 - 40,301,170 (-)NCBI
Rnor_6.0944,714,138 - 44,739,588 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596445   ⟹   XP_017451934
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,796,978 (-)NCBI
mRatBN7.2940,278,100 - 40,301,170 (-)NCBI
Rnor_6.0944,714,138 - 44,739,588 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596446   ⟹   XP_017451935
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,790,753 (-)NCBI
mRatBN7.2940,278,100 - 40,294,946 (-)NCBI
Rnor_6.0944,714,138 - 44,733,769 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039083576   ⟹   XP_038939504
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,847,191 (-)NCBI
mRatBN7.2940,278,100 - 40,351,453 (-)NCBI
RefSeq Acc Id: XM_039083577   ⟹   XP_038939505
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,847,554 (-)NCBI
mRatBN7.2940,278,100 - 40,351,764 (-)NCBI
RefSeq Acc Id: XM_039083578   ⟹   XP_038939506
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,847,463 (-)NCBI
mRatBN7.2940,278,100 - 40,351,764 (-)NCBI
RefSeq Acc Id: XM_039083579   ⟹   XP_038939507
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,845,827 (-)NCBI
mRatBN7.2940,278,100 - 40,350,020 (-)NCBI
RefSeq Acc Id: XM_039083580   ⟹   XP_038939508
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,845,214 (-)NCBI
mRatBN7.2940,278,100 - 40,349,407 (-)NCBI
RefSeq Acc Id: XM_063267158   ⟹   XP_063123228
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,845,927 (-)NCBI
RefSeq Acc Id: XM_063267159   ⟹   XP_063123229
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,847,187 (-)NCBI
RefSeq Acc Id: XM_063267160   ⟹   XP_063123230
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,847,187 (-)NCBI
RefSeq Acc Id: XM_063267161   ⟹   XP_063123231
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,773,907 - 47,847,463 (-)NCBI
RefSeq Acc Id: XR_010054595
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,778,309 - 47,847,187 (-)NCBI
1 to 5 of 16 rows
1 to 5 of 16 rows
RefSeq Acc Id: XP_008765252   ⟸   XM_008767030
- Peptide Label: isoform X5
- UniProtKB: A0A8I5ZJ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451934   ⟸   XM_017596445
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017451933   ⟸   XM_017596444
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017451935   ⟸   XM_017596446
- Peptide Label: isoform X6
- Sequence:
Ensembl Acc Id: ENSRNOP00000059807   ⟸   ENSRNOT00000067197
BRCT   UmuC

Name Modeler Protein Id AA Range Protein Structure
AF-D3ZRU9-F1-model_v2 AlphaFold D3ZRU9 1-1234 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 40 of 48 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-27771 BioCyc
Ensembl Genes ENSRNOG00000018623 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000067197.3 UniProtKB/TrEMBL
  ENSRNOT00000111097 ENTREZGENE
  ENSRNOT00000111097.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.1280 UniProtKB/TrEMBL
  3.30.1490.100 UniProtKB/TrEMBL
  3.30.70.270 UniProtKB/TrEMBL
  3.40.1170.60 UniProtKB/TrEMBL
  3.40.50.10190 UniProtKB/TrEMBL
  5' to 3' exonuclease, C-terminal subdomain UniProtKB/TrEMBL
  6.10.250.1490 UniProtKB/TrEMBL
  6.10.250.1630 UniProtKB/TrEMBL
InterPro BRCT UniProtKB/TrEMBL
  BRCT_dom_sf UniProtKB/TrEMBL
  DNA/RNA_pol_sf UniProtKB/TrEMBL
  DNA_pol_Y-fam_lit_finger_sf UniProtKB/TrEMBL
  DNA_pol_Y-fam_little_finger UniProtKB/TrEMBL
  DNA_repair_prot_UmuC-like UniProtKB/TrEMBL
  DUF4414 UniProtKB/TrEMBL
  IMS_HHH_1 UniProtKB/TrEMBL
  REV1 UniProtKB/TrEMBL
  Rev1_C UniProtKB/TrEMBL
  Rev1_C_sf UniProtKB/TrEMBL
  Rev1_UBM1/2 UniProtKB/TrEMBL
  Rev_trsase/Diguanyl_cyclase UniProtKB/TrEMBL
NCBI Gene 316344 ENTREZGENE
PANTHER DNA REPAIR PROTEIN REV1 UniProtKB/TrEMBL
  DNA REPAIR PROTEIN REV1 UniProtKB/TrEMBL
Pfam BRCT UniProtKB/TrEMBL
  DUF4414 UniProtKB/TrEMBL
  IMS UniProtKB/TrEMBL
  IMS_C UniProtKB/TrEMBL
  IMS_HHH_1 UniProtKB/TrEMBL
  REV1_C UniProtKB/TrEMBL
PhenoGen Rev1 PhenoGen
PIRSF REV1 UniProtKB/TrEMBL
PROSITE BRCT UniProtKB/TrEMBL
  UMUC UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018623 RatGTEx
1 to 40 of 48 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-13 Rev1  REV1, DNA directed polymerase  Rev1  REV1, polymerase (DNA directed)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-10 Rev1  REV1, polymerase (DNA directed)  Rev1  REV1 homolog (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Rev1  REV1 homolog (S. cerevisiae)  Rev1l_predicted  REV1-like (S. cerevisiae) (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Rev1l_predicted  REV1-like (S. cerevisiae) (predicted)      Symbol and Name status set to approved 70820 APPROVED