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Gene: KCNV1 (potassium voltage-gated channel modifier subfamily V member 1) Homo sapiens

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Symbol:

KCNV1

Name:

potassium voltage-gated channel modifier subfamily V member 1

RGD ID:

731335

HGNC Page

HGNC:18861

Description:

Predicted to enable potassium channel regulator activity. Predicted to be involved in action potential and potassium ion transmembrane transport. Located in intercellular bridge and plasma membrane.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

HNKA; KCNB3; KV2.3; KV8.1; neuronal potassium channel alpha subunit HNKA; potassium channel Kv8.1; potassium channel, subfamily V, member 1; potassium channel, voltage gated modifier subfamily V, member 1; potassium voltage-gated channel subfamily V member 1; voltage-gated potassium channel subunit Kv8.1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	109,963,636 - 109,975,771 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	109,963,636 - 109,975,771 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	110,975,865 - 110,988,000 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	111,048,409 - 111,056,135 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	111,048,410 - 111,056,135	NCBI
Celera	8	107,166,854 - 107,174,580 (-)	NCBI		Celera
Cytogenetic Map	8	q23.2	NCBI
HuRef	8	106,301,223 - 106,308,930 (-)	NCBI		HuRef
CHM1_1	8	111,019,498 - 111,027,224 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	111,092,275 - 111,104,410 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
KCNV1	Human	17beta-estradiol	increases expression	EXP		6480464	Estradiol results in increased expression of KCNV1 mRNA	CTD	PMID:31614463
KCNV1	Human	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in decreased expression of KCNV1 mRNA	CTD	PMID:33387578
KCNV1	Human	3,3',4,4',5-pentachlorobiphenyl	increases expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	3 more ...	CTD	PMID:23196670
KCNV1	Human	4-nonylphenol	multiple interactions	EXP		6480464	[4-tert-octylphenol co-treated with 4-nonylphenol] results in decreased expression of KCNV1 mRNA	CTD	PMID:23626723
KCNV1	Human	4-tert-Octylphenol	multiple interactions	EXP		6480464	[4-tert-octylphenol co-treated with 4-nonylphenol] results in decreased expression of KCNV1 mRNA	CTD	PMID:23626723
KCNV1	Human	aflatoxin B1	affects expression	EXP		6480464	Aflatoxin B1 affects the expression of KCNV1 protein	CTD	PMID:20106945
KCNV1	Human	aflatoxin B1	increases methylation	EXP		6480464	Aflatoxin B1 results in increased methylation of KCNV1 promoter	CTD	PMID:30157460
KCNV1	Human	aflatoxin B1	increases expression	EXP		6480464	Aflatoxin B1 results in increased expression of KCNV1 mRNA	CTD	PMID:22100608
KCNV1	Human	ammonium chloride	affects expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	Ammonium Chloride affects the expression of KCNV1 mRNA	CTD	PMID:16483693
KCNV1	Human	arsenite(3-)	multiple interactions	EXP		6480464	arsenite inhibits the reaction [G3BP1 protein binds to KCNV1 mRNA]	CTD	PMID:32406909
KCNV1	Human	benzo[a]pyrene	increases methylation	EXP		6480464	Benzo(a)pyrene results in increased methylation of KCNV1 5' UTR more ...	CTD	PMID:27901495
KCNV1	Human	benzo[a]pyrene	increases expression	EXP		6480464	Benzo(a)pyrene results in increased expression of KCNV1 mRNA	CTD	PMID:32234424
KCNV1	Human	bisphenol A	decreases expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of KCNV1 mRNA	CTD	PMID:25181051 and PMID:34947998
KCNV1	Human	bisphenol A	decreases expression	ISO	Kcnv1 (Mus musculus)	6480464	bisphenol A results in decreased expression of KCNV1 mRNA	CTD	PMID:32156529
KCNV1	Human	butanal	increases expression	EXP		6480464	butyraldehyde results in increased expression of KCNV1 mRNA	CTD	PMID:26079696
KCNV1	Human	choline	multiple interactions	ISO	Kcnv1 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased methylation of KCNV1 gene	CTD	PMID:20938992
KCNV1	Human	dorsomorphin	multiple interactions	EXP		6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
KCNV1	Human	fenamidone	decreases expression	ISO	Kcnv1 (Mus musculus)	6480464	fenamidone results in decreased expression of KCNV1 mRNA	CTD	PMID:27029645
KCNV1	Human	fenvalerate	increases expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	fenvalerate results in increased expression of KCNV1 mRNA	CTD	PMID:30307764
KCNV1	Human	fluoxetine	decreases expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	Fluoxetine results in decreased expression of KCNV1 mRNA	CTD	PMID:17033635
KCNV1	Human	folic acid	multiple interactions	ISO	Kcnv1 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased methylation of KCNV1 gene	CTD	PMID:20938992
KCNV1	Human	L-methionine	multiple interactions	ISO	Kcnv1 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased methylation of KCNV1 gene	CTD	PMID:20938992
KCNV1	Human	lipopolysaccharide	multiple interactions	EXP		6480464	[S-(1 more ...	CTD	PMID:35811015
KCNV1	Human	lipopolysaccharide	increases expression	EXP		6480464	Lipopolysaccharides results in increased expression of KCNV1 mRNA	CTD	PMID:35811015
KCNV1	Human	MeIQx	increases expression	EXP		6480464	2-amino-3 more ...	CTD	PMID:20816883
KCNV1	Human	N-Nitrosopyrrolidine	increases expression	EXP		6480464	N-Nitrosopyrrolidine results in increased expression of KCNV1 mRNA	CTD	PMID:32234424
KCNV1	Human	niclosamide	decreases expression	EXP		6480464	Niclosamide results in decreased expression of KCNV1 mRNA	CTD	PMID:36318118
KCNV1	Human	O-methyleugenol	increases expression	EXP		6480464	methyleugenol results in increased expression of KCNV1 mRNA	CTD	PMID:32234424
KCNV1	Human	p-tert-Amylphenol	multiple interactions	EXP		6480464	[4-tert-octylphenol co-treated with 4-nonylphenol] results in decreased expression of KCNV1 mRNA	CTD	PMID:23626723
KCNV1	Human	panobinostat	multiple interactions	EXP		6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of KCNV1 mRNA	CTD	PMID:27188386
KCNV1	Human	paracetamol	decreases expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	Acetaminophen results in decreased expression of KCNV1 mRNA	CTD	PMID:33387578
KCNV1	Human	propanal	increases expression	EXP		6480464	propionaldehyde results in increased expression of KCNV1 mRNA	CTD	PMID:26079696
KCNV1	Human	S-(1,2-dichlorovinyl)-L-cysteine	multiple interactions	EXP		6480464	[S-(1 more ...	CTD	PMID:35811015
KCNV1	Human	SB 431542	multiple interactions	EXP		6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
KCNV1	Human	sodium arsenite	affects methylation	EXP		6480464	sodium arsenite affects the methylation of KCNV1 gene	CTD	PMID:28589171
KCNV1	Human	sodium arsenite	multiple interactions	EXP		6480464	sodium arsenite results in decreased expression of and affects the splicing of KCNV1 mRNA	CTD	PMID:25879800
KCNV1	Human	sunitinib	decreases expression	EXP		6480464	Sunitinib results in decreased expression of KCNV1 mRNA	CTD	PMID:31533062
KCNV1	Human	titanium dioxide	decreases expression	ISO	Kcnv1 (Mus musculus)	6480464	titanium dioxide results in decreased expression of KCNV1 mRNA	CTD	PMID:29264374
KCNV1	Human	titanium dioxide	increases methylation	ISO	Kcnv1 (Mus musculus)	6480464	titanium dioxide results in increased methylation of KCNV1 gene	CTD	PMID:35295148
KCNV1	Human	trichloroethene	decreases expression	ISO	Kcnv1 (Rattus norvegicus)	6480464	Trichloroethylene results in decreased expression of KCNV1 mRNA	CTD	PMID:33387578
KCNV1	Human	trichostatin A	increases expression	EXP		6480464	trichostatin A results in increased expression of KCNV1 mRNA	CTD	PMID:24935251 and PMID:26272509
KCNV1	Human	trichostatin A	multiple interactions	EXP		6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of KCNV1 mRNA	CTD	PMID:27188386
KCNV1	Human	valproic acid	increases expression	EXP		6480464	Valproic Acid results in increased expression of KCNV1 mRNA	CTD	PMID:23179753 more ...
KCNV1	Human	valproic acid	multiple interactions	EXP		6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of KCNV1 mRNA	CTD	PMID:27188386
KCNV1	Human	vinclozolin	increases methylation	ISO	Kcnv1 (Rattus norvegicus)	6480464	vinclozolin results in increased methylation of KCNV1 gene	CTD	PMID:31682807

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
KCNV1	Human	action potential	involved_in	IBA	FB:FBgn0003380 more ...	150520179		GO_Central	GO_REF:0000033
KCNV1	Human	monoatomic ion transmembrane transport	involved_in	IEA	UniProtKB-KW:KW-0407 and UniProtKB-KW:KW-0851	150520179		UniProt	GO_REF:0000043
KCNV1	Human	monoatomic ion transport	involved_in	IEA	UniProtKB-KW:KW-0406	150520179		UniProt	GO_REF:0000043
KCNV1	Human	monoatomic ion transport	involved_in	IEA	InterPro:IPR005821	150520179		InterPro	GO_REF:0000002
KCNV1	Human	potassium ion transmembrane transport	involved_in	IEA	UniProtKB-KW:KW-0631	150520179		UniProt	GO_REF:0000043
KCNV1	Human	potassium ion transmembrane transport	involved_in	IBA	MGI:102663 more ...	150520179		GO_Central	GO_REF:0000033
KCNV1	Human	potassium ion transmembrane transport	involved_in	IEA	GO:0005249	150520179		GOC	GO_REF:0000108
KCNV1	Human	potassium ion transport	involved_in	TAS		150520179	PMID:8670833	PINC	PMID:8670833
KCNV1	Human	potassium ion transport	involved_in	IEA	UniProtKB-KW:KW-0633	150520179		UniProt	GO_REF:0000043
KCNV1	Human	potassium ion transport	involved_in	IEA	InterPro:IPR003968 more ...	150520179		InterPro	GO_REF:0000002
KCNV1	Human	protein homooligomerization	involved_in	IEA	InterPro:IPR003131	150520179		InterPro	GO_REF:0000002
KCNV1	Human	transmembrane transport	involved_in	IEA	InterPro:IPR005821	150520179		InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
KCNV1	Human	endomembrane system	located_in	IEA	UniProtKB-SubCell:SL-0147	150520179		UniProt	GO_REF:0000044
KCNV1	Human	intercellular bridge	located_in	IDA		150520179		HPA	GO_REF:0000052
KCNV1	Human	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
KCNV1	Human	membrane	is_active_in	IBA	FB:FBgn0003380 more ...	150520179		GO_Central	GO_REF:0000033
KCNV1	Human	membrane	located_in	IEA	InterPro:IPR005821	150520179		InterPro	GO_REF:0000002
KCNV1	Human	monoatomic ion channel complex	part_of	IEA	UniProtKB-KW:KW-0851	150520179		UniProt	GO_REF:0000043
KCNV1	Human	plasma membrane	located_in	IDA		150520179		HPA	GO_REF:0000052
KCNV1	Human	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	150520179		UniProt	GO_REF:0000043
KCNV1	Human	plasma membrane	located_in	TAS		150520179	PMID:8670833	PINC	PMID:8670833 and Reactome:R-HSA-1296127
KCNV1	Human	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	150520179		UniProt	GO_REF:0000044
KCNV1	Human	voltage-gated potassium channel complex	part_of	IEA	InterPro:IPR003968 more ...	150520179		InterPro	GO_REF:0000002
KCNV1	Human	voltage-gated potassium channel complex	part_of	IBA	FB:FBgn0003380 more ...	150520179		GO_Central	GO_REF:0000033

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
KCNV1	Human	ion channel inhibitor activity	enables	TAS		150520179	PMID:8670833	PINC	PMID:8670833
KCNV1	Human	monoatomic ion channel activity	enables	IEA	InterPro:IPR005821	150520179		InterPro	GO_REF:0000002
KCNV1	Human	potassium channel activity		ISO	Kcnv1 (Rattus norvegicus)	9068941		RGD	PMID:9169526 and REF_RGD_ID:633103
KCNV1	Human	potassium channel activity	enables	IEA	UniProtKB-KW:KW-0631	150520179		UniProt	GO_REF:0000043
KCNV1	Human	potassium channel regulator activity	enables	TAS		150520179	PMID:8670833	PINC	PMID:8670833
KCNV1	Human	potassium channel regulator activity	enables	IBA	MGI:1197011 more ...	150520179		GO_Central	GO_REF:0000033
KCNV1	Human	voltage-gated potassium channel activity	enables	IEA	InterPro:IPR003968 more ...	150520179		InterPro	GO_REF:0000002

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8619474	PMID:8670833	PMID:9079713	PMID:9110174	PMID:12383276	PMID:12477932	PMID:14697513	PMID:16382104	PMID:21873635	PMID:25056061	PMID:30021884	PMID:33961781
PMID:34857952

KCNV1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	109,963,636 - 109,975,771 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	109,963,636 - 109,975,771 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	110,975,865 - 110,988,000 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	111,048,409 - 111,056,135 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	111,048,410 - 111,056,135	NCBI
Celera	8	107,166,854 - 107,174,580 (-)	NCBI		Celera
Cytogenetic Map	8	q23.2	NCBI
HuRef	8	106,301,223 - 106,308,930 (-)	NCBI		HuRef
CHM1_1	8	111,019,498 - 111,027,224 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	111,092,275 - 111,104,410 (-)	NCBI		T2T-CHM13v2.0

Kcnv1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	44,959,482 - 44,979,375 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	44,969,680 - 44,978,316 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	45,096,086 - 45,115,912 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	45,106,284 - 45,114,920 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	44,937,830 - 44,946,480 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	44,936,358 - 44,944,901 (-)	NCBI		MGSCv36	mm8
Celera	15	45,557,088 - 45,565,718 (-)	NCBI		Celera
Cytogenetic Map	15	B3.3	NCBI
cM Map	15	17.25	NCBI

Kcnv1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	78,145,319 - 78,153,794 (-)	NCBI		GRCr8
mRatBN7.2	7	76,260,695 - 76,269,170 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	76,260,695 - 76,269,170 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	78,112,150 - 78,120,639 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	80,314,662 - 80,323,151 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	80,180,363 - 80,188,851 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	84,016,864 - 84,023,205 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	84,015,207 - 84,023,316 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	84,031,382 - 84,037,723 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	81,012,246 - 81,018,587 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	81,032,975 - 81,039,317 (-)	NCBI
Celera	7	73,232,467 - 73,238,820 (-)	NCBI		Celera
Cytogenetic Map	7	q31	NCBI

Kcnv1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	17,292,459 - 17,299,241 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955417	17,292,459 - 17,298,773 (-)	NCBI	ChiLan1.0	ChiLan1.0

KCNV1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	127,341,870 - 127,351,948 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	102,863,040 - 102,873,102 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	106,616,952 - 106,627,423 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	108,758,296 - 108,770,506 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	108,761,656 - 108,770,506 (-)	Ensembl	panpan1.1		panPan2

KCNV1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	10,440,159 - 10,449,369 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	10,443,595 - 10,450,005 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	10,430,455 - 10,439,600 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	10,721,039 - 10,730,178 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	10,721,400 - 10,730,886 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	10,468,908 - 10,478,047 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	10,580,313 - 10,589,461 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	10,669,843 - 10,678,992 (-)	NCBI		UU_Cfam_GSD_1.0

Kcnv1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	27,686,632 - 27,696,316 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	35,113,788 - 35,123,474 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	35,113,508 - 35,119,855 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KCNV1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	27,641,238 - 27,650,054 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	27,640,867 - 27,648,591 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	29,810,564 - 29,817,706 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KCNV1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	104,656,486 - 104,665,417 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	104,654,853 - 104,664,699 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	35,896,728 - 35,908,903 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kcnv1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	9,010,899 - 9,019,857 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624763	9,013,219 - 9,020,870 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in KCNV1
12 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3	copy number gain	See cases [RCV000051206]	Chr8:241530..145049449 [GRCh38] Chr8:191530..146274835 [GRCh37] Chr8:181530..146245639 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q23.1-23.2(chr8:107356178-110913494)x3	copy number gain	See cases [RCV000052185]	Chr8:107356178..110913494 [GRCh38] Chr8:108368406..111925723 [GRCh37] Chr8:108437582..111994899 [NCBI36] Chr8:8q23.1-23.2	uncertain significance
GRCh38/hg38 8q22.1-24.3(chr8:95606052-145054775)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]\|See cases [RCV000053677]	Chr8:95606052..145054775 [GRCh38] Chr8:96618280..146280161 [GRCh37] Chr8:96687456..146250965 [NCBI36] Chr8:8q22.1-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]\|See cases [RCV000053604]	Chr8:244417..145054775 [GRCh38] Chr8:194417..146280161 [GRCh37] Chr8:184417..146250965 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3	copy number gain	See cases [RCV000053602]	Chr8:241530..145054634 [GRCh38] Chr8:191530..146280020 [GRCh37] Chr8:181530..146250824 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
NM_014379.2(KCNV1):c.1456G>A (p.Glu486Lys)	single nucleotide variant	Malignant melanoma [RCV000068099]	Chr8:109968135 [GRCh38] Chr8:110980364 [GRCh37] Chr8:111049540 [NCBI36] Chr8:8q23.2	not provided
NM_014379.2(KCNV1):c.597C>T (p.Ile199=)	single nucleotide variant	Malignant melanoma [RCV000068100]	Chr8:109972652 [GRCh38] Chr8:110984881 [GRCh37] Chr8:111054057 [NCBI36] Chr8:8q23.2	not provided
GRCh37/hg19 8p12-q24.3(chr8:31936551-146295771)x3	copy number gain	not provided [RCV000848192]	Chr8:31936551..146295771 [GRCh37] Chr8:8p12-q24.3	pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:94682154-145068656)x3	copy number gain	See cases [RCV000134353]	Chr8:94682154..145068656 [GRCh38] Chr8:95694382..146294042 [GRCh37] Chr8:95763558..146264846 [NCBI36] Chr8:8q22.1-24.3	pathogenic
GRCh38/hg38 8q21.3-24.23(chr8:86300584-137022587)x3	copy number gain	See cases [RCV000135621]	Chr8:86300584..137022587 [GRCh38] Chr8:87312813..138034830 [GRCh37] Chr8:87381929..138104012 [NCBI36] Chr8:8q21.3-24.23	pathogenic\|likely pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3	copy number gain	See cases [RCV000138643]	Chr8:241605..145054781 [GRCh38] Chr8:191605..146280167 [GRCh37] Chr8:181605..146250971 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q21.3-24.3(chr8:87931152-145068712)x3	copy number gain	See cases [RCV000138551]	Chr8:87931152..145068712 [GRCh38] Chr8:88943380..146294098 [GRCh37] Chr8:89012496..146264902 [NCBI36] Chr8:8q21.3-24.3	pathogenic
GRCh38/hg38 8q21.13-24.3(chr8:77480050-145068712)x3	copy number gain	See cases [RCV000139036]	Chr8:77480050..145068712 [GRCh38] Chr8:78392286..146294098 [GRCh37] Chr8:78554841..146264902 [NCBI36] Chr8:8q21.13-24.3	pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:97382873-145070385)x3	copy number gain	See cases [RCV000140447]	Chr8:97382873..145070385 [GRCh38] Chr8:98395101..146295771 [GRCh37] Chr8:98464277..146266575 [NCBI36] Chr8:8q22.1-24.3	pathogenic
GRCh38/hg38 8q11.1-24.3(chr8:46031340-139285494)x3	copy number gain	See cases [RCV000139539]	Chr8:46031340..139285494 [GRCh38] Chr8:46942962..140297737 [GRCh37] Chr8:47062127..140366919 [NCBI36] Chr8:8q11.1-24.3	pathogenic
GRCh38/hg38 8q22.3-24.3(chr8:100867343-145070385)x3	copy number gain	See cases [RCV000141694]	Chr8:100867343..145070385 [GRCh38] Chr8:101879571..146295771 [GRCh37] Chr8:101948747..146266575 [NCBI36] Chr8:8q22.3-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3	copy number gain	See cases [RCV000141808]	Chr8:208048..145070385 [GRCh38] Chr8:158048..146295771 [GRCh37] Chr8:148048..146266575 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8p21.3-q24.3(chr8:21291522-145070385)x3	copy number gain	See cases [RCV000142021]	Chr8:21291522..145070385 [GRCh38] Chr8:21149033..146295771 [GRCh37] Chr8:21193313..146266575 [NCBI36] Chr8:8p21.3-q24.3	pathogenic
GRCh38/hg38 8q22.3-24.3(chr8:103306336-145068712)x3	copy number gain	See cases [RCV000142810]	Chr8:103306336..145068712 [GRCh38] Chr8:104318564..146294098 [GRCh37] Chr8:104387740..146264902 [NCBI36] Chr8:8q22.3-24.3	pathogenic\|likely pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3	copy number gain	See cases [RCV000142858]	Chr8:226452..145068712 [GRCh38] Chr8:176452..146294098 [GRCh37] Chr8:166452..146264902 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q21.13-24.3(chr8:78614077-145054634)x3	copy number gain	See cases [RCV000142597]	Chr8:78614077..145054634 [GRCh38] Chr8:79526312..146280020 [GRCh37] Chr8:79688867..146250824 [NCBI36] Chr8:8q21.13-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3	copy number gain	See cases [RCV000148092]	Chr8:241530..145054634 [GRCh38] Chr8:191530..146280020 [GRCh37] Chr8:181530..146250824 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q21.2-24.3(chr8:85765999-145070385)x3	copy number gain	See cases [RCV000143659]	Chr8:85765999..145070385 [GRCh38] Chr8:86778228..146295771 [GRCh37] Chr8:86863079..146266575 [NCBI36] Chr8:8q21.2-24.3	pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158991-146280828)x3	copy number gain	See cases [RCV000447507]	Chr8:158991..146280828 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
GRCh37/hg19 8q23.1-24.12(chr8:107032887-120742018)x1	copy number loss	See cases [RCV000448650]	Chr8:107032887..120742018 [GRCh37] Chr8:8q23.1-24.12	pathogenic
GRCh37/hg19 8q22.1-24.3(chr8:98432250-146222672)x4	copy number gain	See cases [RCV000448954]	Chr8:98432250..146222672 [GRCh37] Chr8:8q22.1-24.3	pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)	copy number gain	See cases [RCV000510234]	Chr8:158049..146295771 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
GRCh37/hg19 8q21.3-24.3(chr8:93047482-141355635)x3	copy number gain	See cases [RCV000511761]	Chr8:93047482..141355635 [GRCh37] Chr8:8q21.3-24.3	pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)x3	copy number gain	See cases [RCV000511095]	Chr8:158049..146295771 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
GRCh37/hg19 8q21.2-24.3(chr8:86841154-146295771)x3	copy number gain	See cases [RCV000511002]	Chr8:86841154..146295771 [GRCh37] Chr8:8q21.2-24.3	pathogenic
GRCh37/hg19 8q21.2-24.3(chr8:86841228-142689874)x3	copy number gain	See cases [RCV000510854]	Chr8:86841228..142689874 [GRCh37] Chr8:8q21.2-24.3	pathogenic
GRCh37/hg19 8p23.1-q24.3(chr8:12490999-146295771)x3	copy number gain	See cases [RCV000512169]	Chr8:12490999..146295771 [GRCh37] Chr8:8p23.1-q24.3	pathogenic
GRCh37/hg19 8q21.2-23.3(chr8:86841154-116518125)x3	copy number gain	not provided [RCV000683045]	Chr8:86841154..116518125 [GRCh37] Chr8:8q21.2-23.3	pathogenic
GRCh37/hg19 8q23.1-24.13(chr8:110250943-123515785)x1	copy number loss	not provided [RCV000683038]	Chr8:110250943..123515785 [GRCh37] Chr8:8q23.1-24.13	pathogenic
GRCh37/hg19 8q23.2(chr8:110847849-112047339)x3	copy number gain	not provided [RCV000683006]	Chr8:110847849..112047339 [GRCh37] Chr8:8q23.2	likely benign
GRCh37/hg19 8p23.3-q24.3(chr8:164984-146293414)x3	copy number gain	not provided [RCV000747254]	Chr8:164984..146293414 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:10213-146293414)x3	copy number gain	not provided [RCV000747248]	Chr8:10213..146293414 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
GRCh37/hg19 8q22.3-23.3(chr8:104437051-114170843)x1	copy number loss	not provided [RCV000847013]	Chr8:104437051..114170843 [GRCh37] Chr8:8q22.3-23.3	uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3	copy number gain	not provided [RCV000848478]	Chr8:158048..146295771 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
NM_014379.4(KCNV1):c.1450G>A (p.Gly484Ser)	single nucleotide variant	not specified [RCV004303166]	Chr8:109968141 [GRCh38] Chr8:110980370 [GRCh37] Chr8:8q23.2	uncertain significance
GRCh37/hg19 8q23.1-24.13(chr8:108421573-123429638)x3	copy number gain	not provided [RCV001259025]	Chr8:108421573..123429638 [GRCh37] Chr8:8q23.1-24.13	pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)	copy number gain	Polydactyly [RCV002280629]	Chr8:158048..146295771 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
GRCh37/hg19 8q21.2-24.3(chr8:84712253-146295771)x3	copy number gain	See cases [RCV002285066]	Chr8:84712253..146295771 [GRCh37] Chr8:8q21.2-24.3	pathogenic
GRCh37/hg19 8q23.1-24.12(chr8:107032887-120742018)	copy number loss	not specified [RCV002053793]	Chr8:107032887..120742018 [GRCh37] Chr8:8q23.1-24.12	pathogenic
GRCh37/hg19 8q13.2-24.3(chr8:70382990-146295771)	copy number gain	not specified [RCV002053772]	Chr8:70382990..146295771 [GRCh37] Chr8:8q13.2-24.3	pathogenic
GRCh37/hg19 8q22.1-24.3(chr8:96496503-146295711)	copy number gain	not provided [RCV002221452]	Chr8:96496503..146295711 [GRCh37] Chr8:8q22.1-24.3	pathogenic
GRCh37/hg19 8q13.2-24.3(chr8:68912432-146295771)x2	copy number gain	See cases [RCV002292707]	Chr8:68912432..146295771 [GRCh37] Chr8:8q13.2-24.3	pathogenic
GRCh37/hg19 8q21.12-24.11(chr8:79409349-119040631)x3	copy number gain	not provided [RCV002474526]	Chr8:79409349..119040631 [GRCh37] Chr8:8q21.12-24.11	pathogenic
NM_014379.4(KCNV1):c.512C>T (p.Thr171Ile)	single nucleotide variant	not specified [RCV004174204]	Chr8:109972737 [GRCh38] Chr8:110984966 [GRCh37] Chr8:8q23.2	uncertain significance
NM_014379.4(KCNV1):c.718C>A (p.Gln240Lys)	single nucleotide variant	not specified [RCV004296801]	Chr8:109972531 [GRCh38] Chr8:110984760 [GRCh37] Chr8:8q23.2	uncertain significance
NM_014379.4(KCNV1):c.484A>G (p.Ser162Gly)	single nucleotide variant	not specified [RCV004342754]	Chr8:109972765 [GRCh38] Chr8:110984994 [GRCh37] Chr8:8q23.2	uncertain significance
NM_014379.4(KCNV1):c.1022A>T (p.Gln341Leu)	single nucleotide variant	not specified [RCV004363972]	Chr8:109968569 [GRCh38] Chr8:110980798 [GRCh37] Chr8:8q23.2	uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3	copy number gain	not specified [RCV003986742]	Chr8:158048..146295771 [GRCh37] Chr8:8p23.3-q24.3	pathogenic
NM_014379.4(KCNV1):c.13G>A (p.Gly5Ser)	single nucleotide variant	not specified [RCV004398911]	Chr8:109974376 [GRCh38] Chr8:110986605 [GRCh37] Chr8:8q23.2	uncertain significance
NM_014379.4(KCNV1):c.881G>C (p.Ser294Thr)	single nucleotide variant	not specified [RCV004935494]	Chr8:109972368 [GRCh38] Chr8:110984597 [GRCh37] Chr8:8q23.2	uncertain significance
NM_014379.4(KCNV1):c.1087G>A (p.Val363Ile)	single nucleotide variant	not specified [RCV004935493]	Chr8:109968504 [GRCh38] Chr8:110980733 [GRCh37] Chr8:8q23.2	uncertain significance
NM_014379.4(KCNV1):c.962G>A (p.Arg321His)	single nucleotide variant	not specified [RCV004628266]	Chr8:109972287 [GRCh38] Chr8:110984516 [GRCh37] Chr8:8q23.2	uncertain significance
NM_014379.4(KCNV1):c.30C>G (p.Asp10Glu)	single nucleotide variant	not specified [RCV004628265]	Chr8:109974359 [GRCh38] Chr8:110986588 [GRCh37] Chr8:8q23.2	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	1978
Count of miRNA genes:	873
Interacting mature miRNAs:	1053
Transcripts:	ENST00000297404, ENST00000524391
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

RH36043

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	8	110,984,723 - 110,984,887	UniSTS	GRCh37
Build 36	8	111,053,899 - 111,054,063	RGD	NCBI36
Celera	8	107,172,344 - 107,172,508	RGD
Cytogenetic Map	8	q23.2	UniSTS
HuRef	8	106,306,694 - 106,306,858	UniSTS
GeneMap99-GB4 RH Map	8	449.59	UniSTS
NCBI RH Map	8	1222.5	UniSTS

SHGC-16598

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	8	110,979,285 - 110,979,415	UniSTS	GRCh37
Build 36	8	111,048,461 - 111,048,591	RGD	NCBI36
Celera	8	107,166,906 - 107,167,036	RGD
Cytogenetic Map	8	q23.2	UniSTS
HuRef	8	106,301,275 - 106,301,405	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system
191	1415	869	701	4050	1115	1275	4	183	845	64	1207	2764	1875	29	3015	343	951	1156	123


RefSeq Transcripts	NM_014379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB032013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB105051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC027451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF035317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF167082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK297393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK308123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK313469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC028739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471060	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DC321870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000297404 ⟹ ENSP00000297404

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	109,967,006 - 109,974,730 (-)	Ensembl

Ensembl Acc Id:

ENST00000524391 ⟹ ENSP00000435954

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	109,963,636 - 109,975,771 (-)	Ensembl

RefSeq Acc Id:

NM_014379 ⟹ NP_055194

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	8	109,963,636 - 109,975,771 (-)	NCBI
GRCh37	8	110,979,233 - 110,987,963 (-)	NCBI
Build 36	8	111,048,409 - 111,056,135 (-)	NCBI Archive
Celera	8	107,166,854 - 107,174,580 (-)	RGD
HuRef	8	106,301,223 - 106,308,930 (-)	RGD
CHM1_1	8	111,016,139 - 111,028,341 (-)	NCBI
T2T-CHM13v2.0	8	111,092,275 - 111,104,410 (-)	NCBI

Sequence:

show sequence

AAGGCAGCAGGCGCTGGGTAGAGCTCAGCTGGAACACAGTTTCCCTCCTGGACCGGTCGAGTCAGACCTCACGTGTAGACTAAGAGGATCAAAAGAAGAGTACGTTACCTGCGGCGCCGGTTGTGCGC
AGACCAGATGTGCCGGGAGCTGCAGGAGGTCAGAACCTAAGGGAGACGGCGGAAGAAAATGGAGCGTCAGTGATCATCAGACTAGAATGAGAGTGAATTGGGAGAAAATGGTGCGGCCCCCTCACCCA
GAGAACCCTCCCCCACCTGCTCACACCCCCAGCGAACACCCCGGGGGAGGCCTATGAAGCAGCAGTAAAAGAAAAGGGAGGAATATAAATTCTCAAGTTGGAAGGGACCCGGTTACCACTTCCTTTGC
TTTCTGAACTTTTTGTTTTGGTCTCCTGCGGGCAGGAGTGAGTCTCGCCATCCCCCTTGCTTGCTTGCTTGCTTGCGTTCAGCTAAGAGTCATCTTCTCTCCTCTTCCTCCTCCTCCGCCCCACATCT
CCCTCCTTCCTCCCTTCCCCAACCCCTCCACCCACCAAGTAGCGAGTCATTCAATCTGTACACCTCCTGGGCTGGGAATCGCAATTGCGAAGTTGGGAGGCGGGGTGACAACGTTTGGGAAGGGCCAG
GGCGACCGGCAGTGTGCACAGGGACTGTGTCGGGCTTGGACCTCACCTGATCCTCTCTCTTAGCGCGACCCTTCCTCTGCTCCCTGTCTCCTCTTTCTGCCACTTGTGCGCTGCTTCCGCGCACTCCC
GGCTCCCTAGCGGCAGGAGGAGGAAGGCGCACAGCGGGTGGAGAGGGTGCGCCAAGGAGAGGTAACCCCTTCGGGAGCCCGGGGAATCCCGGCCGCCACCAGGGGCCGTGCCACCGCCCTCGCGGGAC
CAAAGCTTCCGGCGTGTCCCCAACTTTGTGGCGCCCTCAGGCCGCGGCGACTGGGTTAGAGATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCCGCTGGACAGCGGCTCCCTGACCTCCCTGGACT
CTAGTGTCTTCTGCAGCGAGGGTGAAGGGGAGCCCTTGGCGCTCGGGGACTGCTTCACGGTCAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTTCCCGCACACGCGCCTT
GGCAAGCTGGCCGTGGTGGTGGCTTCCTACCGCCGCCCCGGGGCCCTGGCCGCCGTGCCCAGCCCTCTGGAGCTTTGCGACGATGCCAACCCCGTGGACAACGAGTACTTCTTCGACCGCAGCTCGCA
GGCGTTCCGATATGTCCTGCACTACTACCGCACCGGCCGCCTGCATGTCATGGAGCAGCTGTGCGCGCTCTCCTTCCTGCAGGAGATCCAGTACTGGGGCATCGATGAGCTCAGCATCGATTCCTGCT
GCAGGGACAGATACTTCAGAAGGAAAGAGCTGAGTGAAACTTTAGACTTCAAGAAGGACACAGAAGACCAGGAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACTGTTCGC
CAGAAGCTCTGGAATATCCTGGAGAAACCTGGATCTTCCACAGCTGCCCGTATCTTTGGCGTCATCTCCATTATCTTCGTGGTGGTGTCCATCATTAACATGGCCCTGATGTCAGCTGAGTTAAGCTG
GCTGGACCTGCAGCTGCTGGAAATCCTGGAGTATGTGTGCATTAGCTGGTTCACCGGGGAGTTTGTCCTCCGCTTCCTGTGTGTGCGGGACAGGTGTCGCTTCCTAAGAAAGGTGCCAAACATCATAG
ACCTCCTTGCCATCTTGCCCTTCTACATCACTCTTCTGGTAGAGAGCCTAAGTGGGAGCCAGACCACGCAGGAGCTGGAGAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCTCAGGGCTCTGCGC
ATGCTAAAGCTGGGCAGACATTCCACAGGATTACGCTCCCTTGGGATGACAATCACCCAGTGTTACGAAGAAGTCGGCCTACTGCTCCTATTTCTATCCGTGGGAATCTCTATATTTTCAACTGTAGA
ATACTTTGCTGAGCAAAGCATTCCTGACACAACCTTCACAAGTGTCCCTTGTGCATGGTGGTGGGCCACCACCTCTATGACTACTGTGGGATATGGGGACATTAGACCAGACACCACCACAGGCAAAA
TCGTGGCCTTCATGTGTATATTATCGGGAATTCTTGTCTTGGCCTTGCCTATTGCTATTATTAACGATCGCTTCTCTGCTTGCTACTTCACCTTGAAACTCAAGGAAGCAGCTGTTAGACAGCGTGAA
GCCCTAAAGAAGCTTACCAAGAATATAGCCACTGACTCATATATCAGTGTTAACTTGAGAGATGTCTATGCCCGGAGTATCATGGAGATGCTGCGACTGAAAGGCAGAGAAAGAGCAAGTACTAGGAG
CAGCGGGGGAGATGATTTCTGGTTTTGAATTAATTTTCAATTTATTTACAAAAGCTATGTACAATTAACTAAAATGATAAAGCAGTGATGTGGATTTCTGTATTCTGATGATGAGTCTCTTCAGAGTA
CTGCTCATCTTAATTAATTTTTGCTGATATATTGCTTCATCTACTAGAATATTTCACATCACCTATAACAACTGCACAGTGTTCTGACACATTTGAGTGTCCAAAATAGCCAATTAACACAACCAAAT
ACAACTGGGCCAATATAAACATGTTTGAATTGTCAAATATAAAATAATGTTATTGCAATACATACAAAAAAGTTAAAGATTTTATGTATCACTAACATTAGAAGTTTTTTGCACCACTAATTTTTTAA
AAATGGAAGGTAAACTGCATAGCCCAGAGAAAGATAAGTAAATATTTAAGAACATATTGAACAACTTTGCTATTTAAAGATATTATCCAAGTACATAAATTACTCCGTTCTCTATCAGTTAAAGCTAT
TGAATATAATACTTAGCTTTACAAGAGAAAACCCATATTTGATGGGCAGAGATTATATCCCTATCTTCTTTTTCATGTAAACCACTGGTCACAAATGAACTGATCTCTGTATCCCATTATTACTATAA
GAGGTGGGAATCCCAAAACTGCTTAGATTGCAGTACATGAGTCTACACAAAGACTTCAACAATTGCACATCTTCATTCTCCCAACTGAGTGTAGTATGTGGAGCATAAAACAGCATATTTCTTAGTAT
TTCATGAATATCAGATGGTCTTTAAATGTCTCTTTATGGATGTATTGTTCACATTATGGCTTTAAAATAATGAATATGTAAAAGTGAGGTAGTGAACATCCTAAATTTCTACACTGGAATTACTAAAT
AATCTTATTTCATAAAATGGGAAATATATGTTAAATGACATCACTGGATGAACTTGAAGATCTTTTACTTGTTAACAAAAAAATACTATGGACAGCTTTCTGATTGTTGGGGTAAATAGCAAATGTTC
AAACTTTGCAGGCATTTTGACATTCATCATAACAACACAATTCCTAGACATTGTATTATATAATTAAAGCCAAAACCTCTAAAGCTAAGAACTAGCTCATGATTCCCATTATTTTAGTAAATGAGATT
CTACAACCTAAGAATAACAAGGAATGCATCACTTTAATACCTACATTTCCAATATAATAGAGCCCCCAAGGGGAAGAAAATTGGTTCTTGAGGAAAAAAAAATCTTATCACTTCATTTACAAAACACA
GATAAGCATATTGAGTATATCTGTGGTATTAACATTTCATGGGGGTGAGATGTTAGGGAAAAAAGCCTAGAAGGCTCTTTGCCAGGGGTGAATGGTGATAAGAAATAAACATTGAGGACTGCTTTAAT
ATATAGCTATAAGGTATTTCATAAACTCTATTTAAGACATCATATTATGCTATGCACTACCAAGAAAGAAAGATGCCAGTCAATTGTAAGATGCCATTAACTGTAAAATGCATCCGGATTTCAGATAT
GTAAAAATTTAAAATAAGCACCTTAAAATCAATGAAATATCGCATGTACTACCTCCTGTTTTCTGGTATGCATGGTTAAGCTCTGAAAACATTTTCACTGATGGCATGAGTTTTAGATTGTGTGCTAA
AGTACTTTAATTCATTTAACTTGTTTCCACTTCTCCTAAATATTATAAAAGGTTCAGGAGATATGAATATTAGTAAGATAAATATTTTACTTCTTACACACATACATGGGTGCTAGATTGTGGCACAG
GGCCACTAGTCATAGTATAAATCCCTTCCACAATCTGAAGGGAAAGTAGAAGTTAGACACAGAAGGTAAACTTACTCCAGCTTTTCTAGAACTTTCCCTAATAAGAATAGTTACTCTGATCCAGGACT
ATGCTCTGTATTCATCATGTATTATGCCATTTTATCCTCAAAATATCCCTATTATATAATTACTATTCTTATACTCTTCAAAATACATATTTTATATATTTATTAACTCAACAAATATTTATTAAGGA
TCTTTGGTGTTCTGGGGACTAGGGAGTCTTTCTTAAACAAGACTAGGTCCTGTTTTCTTGTAGTTAATATTCTGTTCAAAGGTGTGTGAGGAAAAGACAGCGAAACTGAAACATTAAAAGGTATAAAC
TTGCCTAAATTCACACAGGCTATAGATGGCAGAGCCAGCGCTGAATACCAATCTGCCTGACCCGGAAAACGACACTCCTAAAAGTCAAATTGCAGATTTCATTCTTCCTACACAAGCTCTGCATAGAA
ATTTATTTTTTAGGCAGGCAAGCCAACTTCTTGTGCATGGAGAAGTTCAATATGCCTTAAGTAAAATATCAGCTTATTCTCAGAGGTGGAATGGTGCTTTTAAGAAAAGGCTGTGGTGACACCTTATA
GTCATTATTAGATTAAAAATATATTATCTTTAGAGTAAATAGTAGTTGGAAATAAAAAAAATTAAAAACTATGTGTATACATATGTATATATGTTTTTATCATGGAGGATCCTAAACATCTTCTCTAC
AAATGTGCTGTTAGCTATATAAATGTTGTCAAGATGTAGGTCTTCAGAAAGAAGTTTTAAAATATCATTGCTTACTCAATTTTGCTGTTAAATAAAATATCATTTTATTTATTCAATGAATGTATATA
TAAGCAAACCAAATTTCATTTAGGTAAAAAAATCAAGGCAGGAACTCTGCCAATTTTATAACCCATTATTTTAAAACAGTAAACACTTTTTAAACATCTAAGAATTATTGTTATAAAACAATATTTAA
TTTTTTAAAATATAAAATAATTGAATTATTGTCTTTCTCTAAGCTATTTAGAGAACACTACTTTCTTTGTTTTGTTTTGGTTTGGTTTTTTGAGACGGAGTGTCCGTCTGTCGCCCAGGCTGGAGTGC
CAGTGGCGCGATCTCGGCTCACTGCAAGCTCCACCTCTTGGGTTCACACCATTCTCCTGCGTCAACCTCGCGAGTAGCTGGGACTAGAGGCGCCCGCCACCACGCCTGGCTAATTTTTTGTATTTTTA
GCAGAGACGGGGTTTCACCGTGTTAGCCACTTTCTTTGTTAATTTAACTGTTATTTTAAGTTCAGGGATACATGTGCGGGTTTGTTATACAGGTAATCTTGTGTCATGAGAGTTTTTTTGCACGGATT
ATTTCATCACCCAGGTATTAAACCTAGCACCAGTTATTTTTCCTGATTCTCTCCCTCCTCCTACCCAGCACCCTCTGATAGGCCCCAATGTGTGTTGTTTCCCTCTATGTGTTCATGTGCTCTCATCA
TTTAGCTCCCACTTATAAGTGAGAACATGTGGTATTTGGTTTTCTCTTCCTGCATTAGTTTGCTAAGGATAATAGCCTCCAGCTCCATCCATGTCCCTGCAAATGACATGATCTCATTCTTTCATATG
GCTGGATAGTACTTCATGGTGTATACATACATTTTCTTTATCCAGTCTACAGTTGATGGGCATTTAGGTTTATTCCATGTCTTTGCTACTGTGAATAATGCTGCATTGAACATACGTGTGCATGTATC
TTTATAATAAAACAATTTATATTTCTTGGGTATATACCCATTAATGGGATTGCTGGATCCAGTGGTATTTCTGTTTTTAGGTCTTTGAGGAATTGCCACACTCTCACATGGCTGAACTAATTTACACT
CCCAGTATCAGTGTATATGCGTTCCAATTGCTCCATAACTTCGCCAGCATCTGCTTTTTTTTTTTTGCTTTTTAATAATAGCCATTCTGACTAGTGTGAGATGGTATCTCATTATGGTTTTGATTTGC
GTTTCTCTAATGATCAGTGATATTGAGGCTTTTTTTCATATCATTGTTGGCTGCATGTATGTTTTCTTTTGAAAAGTGTCTGTTCATATCCTTTGCCCACTTTTTAATGGGATTTTTTTTTCTTGTAA
ATTTGTTTAAGTTTCTTATAGATGCTGGAATATTAGACTTTTGTAGATGTATAGTTTGCAAATATTTTCCCCCAATCTGTAGGTTGTCTGTTCACTCTGTTGATAGGTTCCTTTGCTCTGACAAAGCT
CTAGAGTTTAATTAGATCCCATTTGCCAATTTTTGCTTTCGTTGCAACCACCTTTTGTGTCTTCATCATGAAATCTTTGCCTGTTAGAAAACACTACTTTCAGACATTTAAATGCATATAGGCAATGC
TTAAGTACCTAAAAAAGCAATTTTAAGAAATTACTGAGGTATCTCTATTAAGAGTGACATATTCATATTTTATTTTATGTATATATTATTTCTATAACATACAAGAAATTGTTGCATTTATCATTTTA
ATGCAAAGTAGTATCAAGTATAATGGATTAGATGCAAAAATAACTGAGGTAGGAATCTCAGTTCTGTGTTTTAATGTGGAATTCTTATGCTTATTAAAATATTTTGATTAGCTGTTGCAGAAAATATA

hide sequence


Protein RefSeqs	NP_055194	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD48031	(Get FASTA)	NCBI Sequence Viewer
	AAH28739	(Get FASTA)	NCBI Sequence Viewer
	BAA92316	(Get FASTA)	NCBI Sequence Viewer
	BAC85099	(Get FASTA)	NCBI Sequence Viewer
	BAG36254	(Get FASTA)	NCBI Sequence Viewer
	BAG59833	(Get FASTA)	NCBI Sequence Viewer
	EAW91938	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000297404.1
	ENSP00000435954
	ENSP00000435954.1
GenBank Protein	Q6PIU1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_055194 ⟸ NM_014379

- UniProtKB:

Q9UHJ4 (UniProtKB/Swiss-Prot), Q6PIU1 (UniProtKB/Swiss-Prot), B2R8Q7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPSSGRALLDSPLDSGSLTSLDSSVFCSEGEGEPLALGDCFTVNVGGSRFVLSQQALSCFPHTRLGKLAVVVASYRRPGALAAVPSPLELCDDANPVDNEYFFDRSSQAFRYVLHYYRTGRLHVMEQL
CALSFLQEIQYWGIDELSIDSCCRDRYFRRKELSETLDFKKDTEDQESQHESEQDFSQGPCPTVRQKLWNILEKPGSSTAARIFGVISIIFVVVSIINMALMSAELSWLDLQLLEILEYVCISWFTGE
FVLRFLCVRDRCRFLRKVPNIIDLLAILPFYITLLVESLSGSQTTQELENVGRIVQVLRLLRALRMLKLGRHSTGLRSLGMTITQCYEEVGLLLLFLSVGISIFSTVEYFAEQSIPDTTFTSVPCAWW
WATTSMTTVGYGDIRPDTTTGKIVAFMCILSGILVLALPIAIINDRFSACYFTLKLKEAAVRQREALKKLTKNIATDSYISVNLRDVYARSIMEMLRLKGRERASTRSSGGDDFWF

hide sequence

Ensembl Acc Id:

ENSP00000297404 ⟸ ENST00000297404

Ensembl Acc Id:

ENSP00000435954 ⟸ ENST00000524391

Protein Domains

BTB

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6PIU1-F1-model_v2	AlphaFold	Q6PIU1	1-500	view protein structure

RGD ID:

7214011

Promoter ID:

EPDNEW_H12751

Type:

initiation region

Name:

KCNV1_1

Description:

potassium voltage-gated channel modifier subfamily V member 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H12753 EPDNEW_H12752

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	8	109,974,695 - 109,974,755	EPDNEW

RGD ID:

7214015

Promoter ID:

EPDNEW_H12752

Type:

initiation region

Name:

KCNV1_3

Description:

potassium voltage-gated channel modifier subfamily V member 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H12751 EPDNEW_H12753

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	8	109,975,736 - 109,975,796	EPDNEW

RGD ID:

7214013

Promoter ID:

EPDNEW_H12753

Type:

initiation region

Name:

KCNV1_2

Description:

potassium voltage-gated channel modifier subfamily V member 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H12751 EPDNEW_H12752

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	8	109,975,938 - 109,975,998	EPDNEW

RGD ID:

6806816

Promoter ID:

HG_KWN:61934

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Lymphoblastoid

Transcripts:

UC003YNR.2, UC010MCW.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	8	111,055,736 - 111,057,162 (-)	MPROMDB

Database	Acc Id	Source(s)
COSMIC	KCNV1	COSMIC
Ensembl Genes	ENSG00000164794	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000297404.1	UniProtKB/Swiss-Prot
	ENST00000524391	ENTREZGENE
	ENST00000524391.6	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.287.70	UniProtKB/Swiss-Prot
	1.20.120.350	UniProtKB/Swiss-Prot
	Potassium Channel Kv1.1, Chain A	UniProtKB/Swiss-Prot
GTEx	ENSG00000164794	GTEx
HGNC ID	HGNC:18861	ENTREZGENE
Human Proteome Map	KCNV1	Human Proteome Map
InterPro	BTB/POZ_dom	UniProtKB/Swiss-Prot
	Ion_trans_dom	UniProtKB/Swiss-Prot
	K_chnl_volt-dep_Kv	UniProtKB/Swiss-Prot
	K_chnl_volt-dep_Kv8.1	UniProtKB/Swiss-Prot
	SKP1/BTB/POZ_sf	UniProtKB/Swiss-Prot
	T1-type_BTB	UniProtKB/Swiss-Prot
	VG_K_chnl	UniProtKB/Swiss-Prot
	Volt_channel_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	hsa:27012	UniProtKB/Swiss-Prot
NCBI Gene	27012	ENTREZGENE
OMIM	608164	OMIM
PANTHER	PTHR11537	UniProtKB/Swiss-Prot
	PTHR11537:SF38	UniProtKB/Swiss-Prot
Pfam	BTB_2	UniProtKB/Swiss-Prot
	Ion_trans	UniProtKB/Swiss-Prot
PharmGKB	PA38721	PharmGKB
PRINTS	KCHANNEL	UniProtKB/Swiss-Prot
	KV8CHANNEL	UniProtKB/Swiss-Prot
	KVCHANNEL	UniProtKB/Swiss-Prot
SMART	BTB	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF54695	UniProtKB/Swiss-Prot
	Voltage-gated potassium channels	UniProtKB/Swiss-Prot
UniProt	B2R8Q7	ENTREZGENE, UniProtKB/TrEMBL
	KCNV1_HUMAN	UniProtKB/Swiss-Prot, ENTREZGENE
	Q76FP2_HUMAN	UniProtKB/TrEMBL
	Q9UHJ4	ENTREZGENE
UniProt Secondary	Q9UHJ4	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-10	KCNV1	potassium voltage-gated channel modifier subfamily V member 1		potassium channel, voltage gated modifier subfamily V, member 1	Symbol and/or name change	5135510	APPROVED
2015-01-20	KCNV1	potassium channel, voltage gated modifier subfamily V, member 1		potassium channel, subfamily V, member 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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