Kcnv1 (potassium voltage-gated channel modifier subfamily V member 1) - Rat Genome Database

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Gene: Kcnv1 (potassium voltage-gated channel modifier subfamily V member 1) Chinchilla lanigera
Analyze
Symbol: Kcnv1
Name: potassium voltage-gated channel modifier subfamily V member 1
RGD ID: 9053809
Description: ENCODES a protein that exhibits potassium channel activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN intercellular bridge (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: potassium channel, subfamily V, member 1; potassium channel, voltage gated modifier subfamily V, member 1; potassium voltage-gated channel subfamily V member 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541717,292,459 - 17,299,241 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541717,292,459 - 17,298,773 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Kcnv1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541717,292,459 - 17,299,241 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541717,292,459 - 17,298,773 (-)NCBIChiLan1.0ChiLan1.0
KCNV1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388109,963,636 - 109,975,771 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8109,963,636 - 109,975,771 (-)EnsemblGRCh38hg38GRCh38
GRCh378110,975,865 - 110,988,000 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368111,048,409 - 111,056,135 (-)NCBINCBI36Build 36hg18NCBI36
Build 348111,048,410 - 111,056,135NCBI
Celera8107,166,854 - 107,174,580 (-)NCBICelera
Cytogenetic Map8q23.2NCBI
HuRef8106,301,223 - 106,308,930 (-)NCBIHuRef
CHM1_18111,019,498 - 111,027,224 (-)NCBICHM1_1
T2T-CHM13v2.08111,092,275 - 111,104,410 (-)NCBIT2T-CHM13v2.0
Kcnv1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391544,959,482 - 44,979,375 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1544,969,680 - 44,978,316 (-)EnsemblGRCm39 Ensembl
GRCm381545,096,086 - 45,115,912 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1545,106,284 - 45,114,920 (-)EnsemblGRCm38mm10GRCm38
MGSCv371544,937,830 - 44,946,480 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361544,936,358 - 44,944,901 (-)NCBIMGSCv36mm8
Celera1545,557,088 - 45,565,718 (-)NCBICelera
Cytogenetic Map15B3.3NCBI
cM Map1517.25NCBI
Kcnv1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8778,145,319 - 78,153,794 (-)NCBIGRCr8
mRatBN7.2776,260,695 - 76,269,170 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl776,260,695 - 76,269,170 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx778,112,150 - 78,120,639 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0780,314,662 - 80,323,151 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0780,180,363 - 80,188,851 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0784,016,864 - 84,023,205 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl784,015,207 - 84,023,316 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0784,031,382 - 84,037,723 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4781,012,246 - 81,018,587 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1781,032,975 - 81,039,317 (-)NCBI
Celera773,232,467 - 73,238,820 (-)NCBICelera
Cytogenetic Map7q31NCBI
KCNV1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27127,341,870 - 127,351,948 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18102,863,040 - 102,873,102 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08106,616,952 - 106,627,423 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18108,758,296 - 108,770,506 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8108,761,656 - 108,770,506 (-)Ensemblpanpan1.1panPan2
KCNV1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11310,440,159 - 10,449,369 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1310,443,595 - 10,450,005 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1310,430,455 - 10,439,600 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01310,721,039 - 10,730,178 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1310,721,400 - 10,730,886 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11310,468,908 - 10,478,047 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01310,580,313 - 10,589,461 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01310,669,843 - 10,678,992 (-)NCBIUU_Cfam_GSD_1.0
Kcnv1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530327,686,632 - 27,696,316 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647035,113,788 - 35,123,474 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647035,113,508 - 35,119,855 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNV1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl427,641,238 - 27,650,054 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1427,640,867 - 27,648,591 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2429,810,564 - 29,817,706 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KCNV1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18104,656,486 - 104,665,417 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8104,654,853 - 104,664,699 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603935,896,728 - 35,908,903 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcnv1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247639,010,899 - 9,019,857 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247639,013,219 - 9,020,870 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000015210   ⟹   ENSCLAP00000015050
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541717,292,459 - 17,299,241 (-)Ensembl
RefSeq Acc Id: XM_005381887   ⟹   XP_005381944
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541717,292,459 - 17,298,773 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005381944 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000015050
  ENSCLAP00000015050.1
Reference Protein Sequences
RefSeq Acc Id: XP_005381944   ⟸   XM_005381887
- UniProtKB: A0A8C2YQ44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000015050   ⟸   ENSCLAT00000015210
Protein Domains
BTB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010374 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000015210 ENTREZGENE
  ENSCLAT00000015210.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.20.120.350 UniProtKB/TrEMBL
InterPro BTB/POZ_dom UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/TrEMBL
  K_chnl_volt-dep_Kv UniProtKB/TrEMBL
  K_chnl_volt-dep_Kv8.1 UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/TrEMBL
NCBI Gene Kcnv1 ENTREZGENE
PANTHER PTHR11537 UniProtKB/TrEMBL
  PTHR11537:SF38 UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/TrEMBL
  Ion_trans UniProtKB/TrEMBL
PRINTS KCHANNEL UniProtKB/TrEMBL
  KV8CHANNEL UniProtKB/TrEMBL
  KVCHANNEL UniProtKB/TrEMBL
SMART BTB UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/TrEMBL
  Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A8C2YQ44 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Kcnv1  potassium voltage-gated channel modifier subfamily V member 1    potassium channel, voltage gated modifier subfamily V, member 1  Symbol and/or name change 5135510 APPROVED
2015-08-25 Kcnv1  potassium channel, voltage gated modifier subfamily V, member 1    potassium channel, subfamily V, member 1  Symbol and/or name change 5135510 APPROVED