LPL (lipoprotein lipase) - Rat Genome Database

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Gene: LPL (lipoprotein lipase) Homo sapiens
Analyze
Symbol: LPL
Name: lipoprotein lipase
RGD ID: 70836
HGNC Page HGNC:6677
Description: Enables several functions, including heparan sulfate proteoglycan binding activity; heparin binding activity; and lipase activity. Involved in several processes, including cholesterol homeostasis; positive regulation of cell differentiation; and triglyceride-rich lipoprotein particle remodeling. Located in extracellular space. Part of catalytic complex. Implicated in Alzheimer's disease; artery disease (multiple); familial hyperlipidemia (multiple); muscular disease; and type 2 diabetes mellitus. Biomarker of Alzheimer's disease and type 2 diabetes mellitus.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: HDLCQ11; LIPD; phospholipase A1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Is Marker For: QTLs:   BP2_H  
Candidate Gene For: BW300_H GLUCO108_H GLUCO109_H BW512_H
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38819,939,253 - 19,967,259 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl819,901,717 - 19,967,259 (+)EnsemblGRCh38hg38GRCh38
GRCh37819,796,764 - 19,824,770 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36819,840,862 - 19,869,050 (+)NCBINCBI36Build 36hg18NCBI36
Build 34819,841,057 - 19,869,049NCBI
Celera818,759,678 - 18,787,858 (+)NCBICelera
Cytogenetic Map8p21.3NCBI
HuRef818,336,820 - 18,365,002 (+)NCBIHuRef
CHM1_1819,998,390 - 20,026,574 (+)NCBICHM1_1
T2T-CHM13v2.0820,204,296 - 20,232,297 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
LPLHumanabdominal obesity-metabolic syndrome 1 treatmentISORGD:301713794382 RGD 
LPLHumanAlcoholic Liver Diseases treatmentISORGD:301713794376 RGD 
LPLHumanAlzheimer's disease no_associationIAGP 13793395DNA:SNPs: :multipleRGD 
LPLHumanAlzheimer's disease no_associationIAGP 13793397DNA:point mutations: :p.N291S, p.S447X (human)RGD 
LPLHumanAlzheimer's disease severityIAGP 13793393DNA, mRNA:SNP, decreased expression: :rs285 (human)RGD 
LPLHumanAlzheimer's disease  IEP 13793392 RGD 
LPLHumanAlzheimer's disease  IAGP 5685661DNA:SNPs: :rs268, rs328 (human)RGD 
LPLHumanAlzheimer's disease  IAGP 13799353DNA:point mutations: :p.N291S, p.S447X (human)RGD 
LPLHumanAlzheimer's disease  IAGP 13793396DNA:polymorphism:intronRGD 
LPLHumanChemical and Drug Induced Liver Injury treatmentISORGD:301713794380 RGD 
LPLHumanChronic Intermittent Hypoxia treatmentISORGD:301713793400 RGD 
LPLHumancoronary artery disease  IAGP 1580537 RGD 
LPLHumanCoronary Disease  ISORGD:301713794381 RGD 
LPLHumanCOVID-19  HEP 28912744mRNA:increased expression:peripheral blood mononuclear cell (human)RGD 
LPLHumanDiabetic Nephropathies susceptibilityIAGP 2306755 RGD 
LPLHumanend stage renal disease  ISORGD:30176909179 RGD 
LPLHumanExperimental Diabetes Mellitus  ISORGD:30172313303 RGD 
LPLHumanExperimental Diabetes Mellitus treatmentISORGD:301713794379 RGD 
LPLHumanfamilial hyperlipidemia  IAGP 1556571 RGD 
LPLHumanfamilial hyperlipidemia treatmentISORGD:301713794383 RGD 
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LPLHumanCoronary Disease  IAGPRGD:85563158554872ClinVar Annotator: match by term: Coronary heart diseaseClinVarPMID:10364086|PMID:10517255|PMID:21146168|PMID:24033266|PMID:25741868|PMID:28492532|PMID:8199176|PMID:8541837|PMID:8872057
LPLHumandilated cardiomyopathy  IAGPRGD:151905438554872ClinVar Annotator: match by term: Primary dilated cardiomyopathyClinVarPMID:28492532|PMID:32041611|PMID:33303402
LPLHumandilated cardiomyopathy 1A  IAGPRGD:151905438554872ClinVar Annotator: match by term: Dilated cardiomyopathy 1AClinVarPMID:28492532|PMID:32041611|PMID:33303402
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:1529815668554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:25741868|PMID:27055971|PMID:28267856|PMID:36325899
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:115679678554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:25034063|PMID:25741868|PMID:28548960|PMID:36991406
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:85563118554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:1752947|PMID:24291057|PMID:25741868|PMID:25966443|PMID:27055971|PMID:27206937|PMID:28492532|PMID:28695157|PMID:29153744|PMID:29748148|PMID:30389453|PMID:7906986|PMID:9279761
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:4074287298554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:25741868|PMID:28695157|PMID:34324844
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:1517708428554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:25741868|PMID:28492532|PMID:29748148
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:268917698554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:10560236|PMID:10619999|PMID:16972177|PMID:19034041|PMID:24646025|PMID:25741868|PMID:26079787|PMID:26892137|PMID:27055971|PMID:27206937|PMID:28492532|PMID:29921298|PMID:30420299|PMID:31352695|PMID:31901151
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:85563178554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:1833777|PMID:21159338|PMID:25741868|PMID:25966443|PMID:27055971|PMID:28267856|PMID:28492532|PMID:8228642|PMID:9714430
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:5969252788554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:25741868|PMID:28492532|PMID:32034744|PMID:34544385
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:126727112|RGD:150554748|RGD:152981563|RGD:155712082|RGD:155800786|RGD:405815627|RGD:407427333|RGD:407491651|RGD:40815375|RGD:40816042|RGD:408365161|RGD:597651886|RGD:597651896|RGD:597735712|RGD:597735719|RGD:5977357258554872ClinVar Annotator: match by term: Hyperlipidemia, familial combined | ClinVar Annotator: match by term: Hyperlipoproteinemia more ...ClinVarPMID:25741868
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:85562858554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:10359734|PMID:11334614|PMID:12905705|PMID:1351946|PMID:1400331|PMID:1619366|PMID:1872917|PMID:18922999|PMID:1969408|PMID:1975597|PMID:22095987|PMID:2394828|PMID:24503134|PMID:24591733|PMID:24747307|PMID:24793350|PMID:25741868|PMID:25966443|PMID:26337181|PMID:27055971|PMID:28438574|PMID:28445021|PMID:28492532|PMID:29054425|PMID:2914262|PMID:29288010|PMID:29748148|PMID:30150141|PMID:30210108|PMID:30352774|PMID:31589614|PMID:32041611|PMID:32472350|PMID:33303402|PMID:34363016|PMID:35837325|PMID:6645961|PMID:9401010
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:116060488554872ClinVar Annotator: match by term: Hyperlipidemia, familial combined, susceptibility toClinVarPMID:11260209|PMID:25741868|PMID:28492532|PMID:9550358
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:126727112|RGD:150554748|RGD:155712082|RGD:155800786|RGD:407491651|RGD:40815375|RGD:40816042|RGD:408365161|RGD:5969252788554872ClinVar Annotator: match by term: Hyperlipidemia, familial combined | ClinVar Annotator: match by term: Hyperlipoproteinemia more ...ClinVarPMID:25741868
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:1529831058554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:15185149|PMID:21159338|PMID:24747307|PMID:25966443|PMID:28492532
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:1529831048554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:28492532|PMID:35309119|PMID:8077845
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:127298428|RGD:15103013|RGD:1513488008554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:25741868|PMID:28492532
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:85563128554872ClinVar Annotator: match by term: Hyperlipidemia, familial combined, susceptibility toClinVarPMID:7753827|PMID:9017514
LPLHumanfamilial combined hyperlipidemia  IAGPRGD:1533030948554872ClinVar Annotator: match by term: Hyperlipidemia, familial combinedClinVarPMID:25741868|PMID:25966443|PMID:31619059|PMID:32041611
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LPLHumanAnimal Mammary Neoplasms  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:12376462
LPLHumanbasal cell carcinoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:36428691
LPLHumancarcinoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:12376462
LPLHumancardiomyopathy  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:10533957
LPLHumancardiovascular system disease  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:16544732
LPLHumanceliac disease  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:30097691
LPLHumanColonic Neoplasms  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:15059925
LPLHumanDyslipidemias  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:17952847
LPLHumanExperimental Liver Cirrhosis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136
LPLHumanExperimental Mammary Neoplasms  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:12376462
LPLHumanfamilial combined hyperlipidemia  EXP 11554173CTD Direct Evidence: marker/mechanismCTD 
LPLHumanfamilial hyperlipidemia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:17658632
LPLHumanfamilial lipoprotein lipase deficiency  EXP 11554173CTD Direct Evidence: marker/mechanismCTD 
LPLHumanhepatitis C  EXP 11554173CTD Direct Evidence: therapeuticCTDPMID:17517063
LPLHumanHypercholesterolemia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:21852083
LPLHumanHyperlipoproteinemia Type II  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:16030523
LPLHumanhypertension  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:22228705
LPLHumanHypertriglyceridemia  EXP 11554173CTD Direct Evidence: marker/mechanism|therapeuticCTDPMID:8147947|PMID:20657596
LPLHumanNecrosis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:10533957
LPLHumanobesity  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:18344982
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Original Reference(s)
LPLHumanfamilial lipoprotein lipase deficiency  ISSRGD:1087613592920OMIM:238600MouseDO 
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LPLHumanfamilial combined hyperlipidemia  IAGP 7240710 OMIM 
LPLHumanfamilial lipoprotein lipase deficiency  IAGP 7240710 OMIM 

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LPLHuman(+)-catechin multiple interactionsISORGD:30176480464Catechin inhibits the reaction [Dietary Fats results in increased expression of LPL mRNA]CTDPMID:23365609
LPLHuman(+)-catechin multiple interactionsEXP 6480464[Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of LPL mRNACTDPMID:24763279
LPLHuman(+/-)-Aegeline multiple interactionsISORGD:108766480464[Caffeine co-treated with coclaurine co-treated with aegeline co-treated with higenamine co-treated with Yohimbine co-treated with more ...CTDPMID:28843594
LPLHuman(1->4)-beta-D-glucan multiple interactionsISORGD:108766480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of LPL mRNACTDPMID:36331819
LPLHuman(20S)-ginsenoside Rh1 increases secretionISORGD:108766480464ginsenoside Rh1 results in increased secretion of LPL proteinCTDPMID:8988629
LPLHuman(R)-noradrenaline increases expressionISORGD:30176480464Norepinephrine results in increased expression of LPL mRNACTDPMID:9032464
LPLHuman(R)-noradrenaline multiple interactionsISORGD:30176480464Prazosin inhibits the reaction [Norepinephrine results in increased expression of LPL mRNA]; Propranolol inhibits the more ...CTDPMID:9032464
LPLHuman(RS)-coclaurine multiple interactionsISORGD:108766480464[Caffeine co-treated with coclaurine co-treated with aegeline co-treated with higenamine co-treated with Yohimbine co-treated with more ...CTDPMID:28843594
LPLHuman(RS)-norcoclaurine multiple interactionsISORGD:108766480464[Caffeine co-treated with coclaurine co-treated with aegeline co-treated with higenamine co-treated with Yohimbine co-treated with more ...CTDPMID:28843594
LPLHuman(S)-coclaurine multiple interactionsISORGD:108766480464[Caffeine co-treated with coclaurine co-treated with aegeline co-treated with higenamine co-treated with Yohimbine co-treated with more ...CTDPMID:28843594
LPLHuman(S)-nicotine increases expressionISORGD:108766480464Nicotine results in increased expression of LPL mRNACTDPMID:21955143
LPLHuman(Z)-ligustilide multiple interactionsISORGD:108766480464[ligustilide co-treated with lipopolysaccharide, E coli O55-B5] results in increased expression of LPL mRNACTDPMID:33130971
LPLHuman1,1-dichloroethene decreases expressionISORGD:108766480464vinylidene chloride results in decreased expression of LPL mRNACTDPMID:26682919
LPLHuman1,3,4-thiadiazole affects expressionISORGD:301764804641,3,4-thiadiazole analog affects the expression of LPL mRNACTDPMID:30905023
LPLHuman1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile decreases expressionEXP 6480464Citalopram results in decreased expression of LPL mRNACTDPMID:38643950
LPLHuman1-naphthyl isothiocyanate increases expressionISORGD:301764804641-Naphthylisothiocyanate results in increased expression of LPL mRNACTDPMID:17522070|PMID:25380136
LPLHuman15-deoxy-Delta(12,14)-prostaglandin J2 increases expressionISORGD:10876648046415-deoxy-delta(12,14)-prostaglandin J2 results in increased expression of LPL mRNACTDPMID:12021203
LPLHuman17alpha-ethynylestradiol affects expressionISORGD:108766480464Ethinyl Estradiol affects the expression of LPL mRNACTDPMID:17555576
LPLHuman17alpha-ethynylestradiol decreases expressionISORGD:30176480464Ethinyl Estradiol results in decreased expression of LPL mRNACTDPMID:17557909
LPLHuman17alpha-ethynylestradiol multiple interactionsISORGD:108766480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of LPL mRNACTDPMID:17942748

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Biological Process
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Original Reference(s)
LPLHumancellular response to fatty acid involved_inISSUniProtKB:P11152150520179 ARUK-UCLGO_REF:0000024
LPLHumancellular response to fatty acid involved_inIEAUniProtKB:P11152|ensembl:ENSMUSP00000015712150520179 EnsemblGO_REF:0000107
LPLHumancellular response to nutrient involved_inISSUniProtKB:P11152150520179 ARUK-UCLGO_REF:0000024
LPLHumancellular response to nutrient involved_inIEAUniProtKB:P11152|ensembl:ENSMUSP00000015712150520179 EnsemblGO_REF:0000107
LPLHumancholesterol homeostasis involved_inIMP 150520179 PMID:25149060BHF-UCLPMID:25149060
LPLHumancholesterol homeostasis involved_inIBAMGI:96216|PANTHER:PTN000906454|UniProtKB:P06858|UniProtKB:P11150|UniProtKB:Q9Y5X9150520179 GO_CentralGO_REF:0000033
LPLHumanchylomicron remodeling involved_inICGO:0004465150520179 PMID:3973011BHF-UCLPMID:3973011
LPLHumanchylomicron remodeling involved_inIMP 150520179 PMID:11342582UniProtPMID:11342582
LPLHumanfatty acid biosynthetic process involved_inIDA 150520179 PMID:182536BHF-UCLPMID:182536
LPLHumanfatty acid biosynthetic process involved_inIBAPANTHER:PTN000906454|UniProtKB:P06858|UniProtKB:P11150|UniProtKB:P11151150520179 GO_CentralGO_REF:0000033
LPLHumanfatty acid biosynthetic process involved_inICGO:0004465150520179 PMID:3973011BHF-UCLPMID:3973011
LPLHumanfatty acid biosynthetic process involved_inISSUniProtKB:P11151150520179 BHF-UCLGO_REF:0000024
LPLHumanfatty acid metabolic process involved_inIDA 150520179 PMID:11342582, PMID:27578112UniProtPMID:11342582|PMID:27578112
LPLHumanhigh-density lipoprotein particle remodeling involved_inIBAPANTHER:PTN000906454|RGD:3009|UniProtKB:P11150|UniProtKB:Q9Y5X9150520179 GO_CentralGO_REF:0000033
LPLHumanlipid catabolic process  ISORGD:30179068941 RGDPMID:12551943|REF_RGD_ID:1580532
LPLHumanlipid catabolic process involved_inIEAUniProtKB-KW:KW-0442150520179 UniProtGO_REF:0000043
LPLHumanlipid metabolic process involved_inIEAUniProtKB-KW:KW-0443150520179 UniProtGO_REF:0000043
LPLHumanlipid metabolic process involved_inIEAInterPro:IPR002330|InterPro:IPR016272|InterPro:IPR033906150520179 InterProGO_REF:0000002
LPLHumanlow-density lipoprotein particle mediated signaling involved_inIMP 150520179 PMID:25149060BHF-UCLPMID:25149060
LPLHumannegative regulation of cellular response to insulin stimulus  ISORGD:30179068941 RGDPMID:25931001|REF_RGD_ID:13794384
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Cellular Component
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LPLHumancatalytic complex part_ofIPI 150520179 PMID:30559189ComplexPortalPMID:30559189
LPLHumancell surface located_inIEAUniProtKB:P11152|ensembl:ENSMUSP00000015712150520179 EnsemblGO_REF:0000107
LPLHumanchylomicron part_ofIEAUniProtKB-KW:KW-0162150520179 UniProtGO_REF:0000043
LPLHumanextracellular region located_inTAS 150520179 ReactomeReactome:R-HSA-174757|Reactome:R-HSA-2395768|Reactome:R-HSA-560498|Reactome:R-HSA-6784628|Reactome:R-HSA-6784676|Reactome:R-HSA-6784861|Reactome:R-HSA-8857928
LPLHumanextracellular region is_active_inIEAUniProtKB:P11152|ensembl:ENSMUSP00000015712150520179 EnsemblGO_REF:0000107
LPLHumanextracellular region located_inIEAUniProtKB-SubCell:SL-0243150520179 UniProtGO_REF:0000044
LPLHumanextracellular region located_inIEAUniProtKB-KW:KW-0964150520179 UniProtGO_REF:0000043
LPLHumanextracellular space located_inIEAUniProtKB:P11152|ensembl:ENSMUSP00000015712150520179 EnsemblGO_REF:0000107
LPLHumanextracellular space is_active_inIBAMGI:96216|MGI:96820|PANTHER:PTN008325466|RGD:1310740|RGD:3009|RGD:3017|RGD:3360|RGD:620792|RGD:620793|UniProtKB:P06858|UniProtKB:P11150|UniProtKB:P11151|UniProtKB:P16233|UniProtKB:P54317|UniProtKB:Q6XZB0|UniProtKB:Q8WWY8|UniProtKB:Q9Y5X9150520179 GO_CentralGO_REF:0000033
LPLHumanextracellular space located_inIEAUniRule:UR000141825150520179 UniProtGO_REF:0000104
LPLHumanextracellular space located_inIDA 150520179 PMID:11342582, PMID:12573449, PMID:2340307, PMID:27578112, PMID:30559189UniProtPMID:11342582|PMID:12573449|PMID:2340307|PMID:27578112|PMID:30559189
LPLHumanextracellular space located_inHDA 150520179 PMID:16502470UniProtPMID:16502470
LPLHumanextracellular space  ISORGD:30179068941 RGDPMID:12551943|REF_RGD_ID:1580532
LPLHumanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
LPLHumanplasma membrane located_inIEAUniProtKB-SubCell:SL-0039150520179 UniProtGO_REF:0000044
LPLHumanplasma membrane located_inIEAUniProtKB-KW:KW-1003150520179 UniProtGO_REF:0000043
LPLHumanvery-low-density lipoprotein particle part_ofIEAUniProtKB-KW:KW-0850150520179 UniProtGO_REF:0000043
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Molecular Function
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LPLHumanapolipoprotein binding enablesIPIUniProtKB:Q6Q788150520179 PMID:15178420BHF-UCLPMID:15178420
LPLHumanapolipoprotein binding enablesIBAPANTHER:PTN002614072|UniProtKB:P06858|UniProtKB:P11151150520179 GO_CentralGO_REF:0000033
LPLHumancalcium ion binding enablesIDA 150520179 PMID:16179346, PMID:30559189UniProtPMID:16179346|PMID:30559189
LPLHumancarboxylic ester hydrolase activity enablesIEAInterPro:IPR016272150520179 InterProGO_REF:0000002
LPLHumanheparan sulfate proteoglycan binding enablesIMP 150520179 PMID:11342582UniProtPMID:11342582
LPLHumanheparin binding enablesIEAUniProtKB-KW:KW-0358150520179 UniProtGO_REF:0000043
LPLHumanheparin binding enablesIEAUniRule:UR000141825150520179 UniProtGO_REF:0000104
LPLHumanheparin binding enablesTAS 150520179 PMID:1969408PINCPMID:1969408
LPLHumanheparin binding enablesIDA 150520179 PMID:11342582, PMID:12573449, PMID:2110364UniProtPMID:11342582|PMID:12573449|PMID:2110364
LPLHumanhydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
LPLHumanlipase activity enablesIEAARBA:ARBA00027300150520179 UniProtGO_REF:0000117
LPLHumanlipase activity enablesIEAInterPro:IPR000734|InterPro:IPR013818150520179 InterProGO_REF:0000002
LPLHumanlipoprotein lipase activity  ISORGD:30179068941 RGDPMID:11788374|PMID:12551943|REF_RGD_ID:1580532|REF_RGD_ID:70246
LPLHumanlipoprotein lipase activity enablesIBAMGI:96820|PANTHER:PTN000906454|RGD:3017|UniProtKB:P06858|UniProtKB:P11151150520179 GO_CentralGO_REF:0000033
LPLHumanlipoprotein lipase activity enablesIEAUniRule:UR000141825150520179 UniProtGO_REF:0000104
LPLHumanlipoprotein lipase activity enablesIDA 150520179 PMID:11342582, PMID:2110364, PMID:2340307, PMID:27578112, PMID:30559189, PMID:3973011UniProtPMID:11342582|PMID:2110364|PMID:2340307|PMID:27578112|PMID:30559189|PMID:3973011
LPLHumanlipoprotein lipase activity enablesISSUniProtKB:P11151150520179 PMID:10727238BHF-UCLGO_REF:0000024|PMID:10727238
LPLHumanlipoprotein lipase activity enablesIEAInterPro:IPR002330150520179 InterProGO_REF:0000002
LPLHumanlipoprotein lipase activity enablesIMP 150520179 PMID:25149060BHF-UCLPMID:25149060
LPLHumanlipoprotein lipase activity enablesIEAEC:3.1.1.34150520179 UniProtGO_REF:0000003
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RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LPLHumanlipid metabolic pathway  TAS 1357916 RGD 
LPLHumanlipoprotein metabolic pathway  TAS 1357916 RGD 

Imported Annotations - SMPDB

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LPLHumanD-glycericacidemia pathway  EXP 10402751 SMPDBSMP:00529
LPLHumanfamilial lipoprotein lipase deficiency pathway  EXP 10402751 SMPDBSMP:00530
LPLHumanglycerol kinase deficiency pathway  EXP 10402751 SMPDBSMP:00187
LPLHumanglycerolipid metabolic pathway  EXP 10402751 SMPDBSMP:00039

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LPLHumanAlzheimer's disease pathway   IEA 6907045 KEGGhsa:05010
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LPLHumanAbnormal circulating lipid concentration  IAGP 1556752decreased LDL particle sizeRGD 
LPLHumanDecreased HDL cholesterol concentration  IAGP 1580539 RGD 
LPLHumanDecreased HDL cholesterol concentration  IAGP 1556752 RGD 
LPLHumanHypertriglyceridemia  IAGP 1580539 RGD 
LPLHumanHypertriglyceridemia  IAGP 1556752 RGD 
1 to 20 of 23 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LPLHumanAcute pancreatitis  IAGP 8699517 HPOMIM:238600|PMID:16174715
LPLHumanAutosomal dominant inheritance  IAGP 8699517 HPOMIM:144250
LPLHumanAutosomal recessive inheritance  IAGP 8699517 HPOMIM:238600|PMID:16174715
LPLHumanElevated circulating apolipoprotein A-II concentration  IAGP 8699517 HPOMIM:144250|PMID:12738753
LPLHumanElevated circulating apolipoprotein B concentration  IAGP 8699517 HPOMIM:144250|PMID:9373757
LPLHumanEpisodic abdominal pain  IAGP 8699517 HPOMIM:238600
LPLHumanEruptive xanthomas  IAGP 8699517 HPOMIM:238600|PMID:16174715
LPLHumanHepatosplenomegaly  IAGP 8699517 HPOMIM:238600
LPLHumanHypercholesterolemia  IAGP 8699517 HPOMIM:144250|MIM:238600|PMID:16174715
LPLHumanHyperlipidemia  IAGP 8699517 HPOMIM:144250|MIM:238600
LPLHumanIncreased circulating chylomicron concentration  IAGP 8699517 HPOMIM:238600
LPLHumanIncreased LDL cholesterol concentration  IAGP 8699517 HPOMIM:144250|PMID:4718953
LPLHumanIncreased VLDL cholesterol concentration  IAGP 8699517 HPOMIM:144250|PMID:4718953
LPLHumanJaundice  IAGP 8699517 HPOMIM:238600
LPLHumanLactescent serum  IAGP 8699517 HPOMIM:238600|PMID:16174715
LPLHumanLipemia retinalis  IAGP 8699517 HPOMIM:238600
LPLHumanMyocardial infarction  IAGP 8699517 HPOMIM:144250|PMID:4718953
LPLHumanNausea  IAGP 8699517 HPOMIM:238600
LPLHumanPrecocious atherosclerosis  IAGP 8699517 HPOMIM:238600|PMID:16174715
LPLHumanSplenomegaly  IAGP 8699517 HPOMIM:238600
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1 to 20 of 61 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LPLHumanDilated cardiomyopathy  IAGPRGD:151905438554872ClinVar Annotator: match by term: CARDIOMYOPATHY, CONGESTIVEClinVarPMID:28492532|PMID:32041611|PMID:33303402
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:1556867468554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVar 
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:5977357258554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:4074273338554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:1517708428554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868|PMID:28492532|PMID:29748148
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:4058156278554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:1529815638554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:5976518968554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:4074287298554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868|PMID:28695157|PMID:34324844
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:5977357128554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:85563178554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:1833777|PMID:21159338|PMID:25741868|PMID:25966443|PMID:27055971|PMID:28267856|PMID:28492532|PMID:8228642|PMID:9714430
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:85563118554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:1752947|PMID:24291057|PMID:25741868|PMID:25966443|PMID:27055971|PMID:27206937|PMID:28492532|PMID:28695157|PMID:29153744|PMID:29748148|PMID:30389453|PMID:7906986|PMID:9279761
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:115679678554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25034063|PMID:25741868|PMID:28548960|PMID:36991406
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:268917698554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:10560236|PMID:10619999|PMID:16972177|PMID:19034041|PMID:24646025|PMID:25741868|PMID:26079787|PMID:26892137|PMID:27055971|PMID:27206937|PMID:28492532|PMID:29921298|PMID:30420299|PMID:31352695|PMID:31901151
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:5977357198554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:5976518868554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:1529831058554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:15185149|PMID:21159338|PMID:24747307|PMID:25966443|PMID:28492532
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:4083651618554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:1529831048554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:28492532|PMID:35309119|PMID:8077845
LPLHumanHyperapobetalipoproteinemia  IAGPRGD:1529815668554872ClinVar Annotator: match by term: HyperapobetalipoproteinemiaClinVarPMID:25741868|PMID:27055971|PMID:28267856|PMID:36325899
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#
Reference Title
Reference Citation
1. Lack of association of lipoprotein lipase gene polymorphisms with coronary artery disease in the Saudi Arab population. Abu-Amero KK, etal., Arch Pathol Lab Med. 2003 May;127(5):597-600.
2. Thiazolidinedione induces a therapeutic effect on hepatosteatosis by regulating stearoyl-CoA desaturase-1, lipase activity, leptin and resistin. Al-Muzafar HM and Amin KA, Exp Ther Med. 2018 Oct;16(4):2938-2948. doi: 10.3892/etm.2018.6563. Epub 2018 Aug 2.
3. Postprandial chylomicrons and adipose tissue lipoprotein lipase are altered in type 2 diabetes independently of obesity and whole-body insulin resistance. Annuzzi G, etal., Nutr Metab Cardiovasc Dis. 2008 Oct;18(8):531-8. Epub 2008 Mar 5.
4. Linkage analysis of candidate genes and the small, dense low-density lipoprotein phenotype. Austin MA, etal., Atherosclerosis 1999 Jan;142(1):79-87.
5. Myrtenal alleviates hyperglycaemia, hyperlipidaemia and improves pancreatic insulin level in STZ-induced diabetic rats. Ayyasamy R and Leelavinothan P, Pharm Biol. 2016 Nov;54(11):2521-2527. doi: 10.3109/13880209.2016.1168852. Epub 2016 May 9.
6. Lipoprotein lipase mutations and Alzheimer's disease. Baum L, etal., Am J Med Genet. 1999 Apr 16;88(2):136-9.
7. A polymorphism in lipoprotein lipase affects the severity of Alzheimer's disease pathophysiology. Blain JF, etal., Eur J Neurosci. 2006 Sep;24(5):1245-51. doi: 10.1111/j.1460-9568.2006.05007.x. Epub 2006 Sep 8.
8. Effect of DanQi Pill on PPARa, lipid disorders and arachidonic acid pathway in rat model of coronary heart disease. Chang H, etal., BMC Complement Altern Med. 2016 Mar 22;16:103. doi: 10.1186/s12906-016-1083-3.
9. Lipoprotein lipase gene is linked and associated with hypertension in Taiwan young-onset hypertension genetic study. Chen P, etal., J Biomed Sci. 2005;12(4):651-8. Epub 2005 Nov 10.
10. Association of lipoprotein lipase (LPL) single nucleotide polymorphisms with type 2 diabetes mellitus. Cho YS, etal., Exp Mol Med. 2008 Oct 31;40(5):523-32.
11. Catalytic triad residue mutation (Asp156----Gly) causing familial lipoprotein lipase deficiency. Co-inheritance with a nonsense mutation (Ser447----Ter) in a Turkish family. Faustinella F, etal., J Biol Chem 1991 Aug 5;266(22):14418-24.
12. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
13. Ubá mango juices intake decreases adiposity and inflammation in high-fat diet-induced obese Wistar rats. Gomes Natal DI, etal., Nutrition. 2016 Sep;32(9):1011-8. doi: 10.1016/j.nut.2016.02.008. Epub 2016 Mar 4.
14. Lipoprotein lipase (LPL) is associated with neurite pathology and its levels are markedly reduced in the dentate gyrus of Alzheimer's disease brains. Gong H, etal., J Histochem Cytochem. 2013 Dec;61(12):857-68. doi: 10.1369/0022155413505601. Epub 2013 Sep 4.
15. Exercise prevents HFD- and OVX-induced type 2 diabetes risk factors by decreasing fat storage and improving fuel utilization. Gorres-Martens BK, etal., Physiol Rep. 2018 Jul;6(13):e13783. doi: 10.14814/phy2.13783.
16. Linkage of low-density lipoprotein size to the lipoprotein lipase gene in heterozygous lipoprotein lipase deficiency. Hokanson JE, etal., Am J Hum Genet 1999 Feb;64(2):608-18.
17. Association of lipoprotein lipase D9N polymorphism with myocardial infarction in type 2 diabetes: the genetics, outcomes, and lipids in type 2 diabetes (GOLD) study. Izar MC, etal., Atherosclerosis. 2009 May;204(1):165-70. Epub 2008 Aug 14.
18. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
19. Muscle-specific overexpression of lipoprotein lipase causes a severe myopathy characterized by proliferation of mitochondria and peroxisomes in transgenic mice. Levak-Frank S, etal., J Clin Invest 1995 Aug;96(2):976-86.
20. Effect of Glycine on Adipocyte Hypertrophy in a Metabolic Syndrome Rat Model. López YR, etal., Curr Drug Deliv. 2016;13(1):158-69.
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PMID:182536   PMID:1281473   PMID:1371284   PMID:1400331   PMID:1406652   PMID:1479292   PMID:1511985   PMID:1521525   PMID:1537564   PMID:1576758   PMID:1598907   PMID:1619366  
PMID:1639392   PMID:1674945   PMID:1702428   PMID:1730727   PMID:1731801   PMID:1737848   PMID:1752947   PMID:1969408   PMID:1975597   PMID:2010533   PMID:2038366   PMID:2110364  
PMID:2121025   PMID:2243796   PMID:2294743   PMID:2340307   PMID:2349938   PMID:2536938   PMID:2701938   PMID:2765475   PMID:3355847   PMID:3515966   PMID:3597382   PMID:3692485  
PMID:3823907   PMID:3973011   PMID:7417307   PMID:7510694   PMID:7592706   PMID:7592875   PMID:7647785   PMID:7686151   PMID:7713910   PMID:7753827   PMID:7806969   PMID:7818530  
PMID:7906986   PMID:7989348   PMID:8096693   PMID:8125298   PMID:8135797   PMID:8144523   PMID:8288243   PMID:8301230   PMID:8308035   PMID:8325986   PMID:8449037   PMID:8486765  
PMID:8567671   PMID:8956048   PMID:9183545   PMID:9298816   PMID:9374130   PMID:9401010   PMID:9430364   PMID:9519338   PMID:9662394   PMID:9719626   PMID:10085125   PMID:10391209  
PMID:10660334   PMID:10727238   PMID:11073182   PMID:11096142   PMID:11126401   PMID:11132601   PMID:11140837   PMID:11171287   PMID:11194013   PMID:11205691   PMID:11229437   PMID:11284423  
PMID:11316129   PMID:11341749   PMID:11342582   PMID:11395037   PMID:11427211   PMID:11441189   PMID:11484171   PMID:11500192   PMID:11533368   PMID:11534394   PMID:11579204   PMID:11593500  
PMID:11605530   PMID:11680797   PMID:11683775   PMID:11702052   PMID:11702219   PMID:11711487   PMID:11714857   PMID:11714860   PMID:11730816   PMID:11796707   PMID:11834518   PMID:11852057  
PMID:11893776   PMID:11893778   PMID:11897170   PMID:11899831   PMID:11921083   PMID:11947965   PMID:11996946   PMID:12032167   PMID:12042669   PMID:12044583   PMID:12082592   PMID:12107736  
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LPL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38819,939,253 - 19,967,259 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl819,901,717 - 19,967,259 (+)EnsemblGRCh38hg38GRCh38
GRCh37819,796,764 - 19,824,770 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36819,840,862 - 19,869,050 (+)NCBINCBI36Build 36hg18NCBI36
Build 34819,841,057 - 19,869,049NCBI
Celera818,759,678 - 18,787,858 (+)NCBICelera
Cytogenetic Map8p21.3NCBI
HuRef818,336,820 - 18,365,002 (+)NCBIHuRef
CHM1_1819,998,390 - 20,026,574 (+)NCBICHM1_1
T2T-CHM13v2.0820,204,296 - 20,232,297 (+)NCBIT2T-CHM13v2.0
Lpl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39869,333,207 - 69,359,584 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl869,333,143 - 69,360,100 (+)EnsemblGRCm39 Ensembl
GRCm38868,880,555 - 68,906,932 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl868,880,491 - 68,907,448 (+)EnsemblGRCm38mm10GRCm38
MGSCv37871,404,454 - 71,430,831 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36871,809,543 - 71,835,921 (+)NCBIMGSCv36mm8
Celera871,423,790 - 71,450,108 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map833.88NCBI
Lpl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81625,596,205 - 25,621,928 (-)NCBIGRCr8
mRatBN7.21620,830,055 - 20,853,855 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1620,829,465 - 20,855,249 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1624,205,897 - 24,229,703 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01627,628,201 - 27,652,035 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01623,571,205 - 23,595,012 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01622,537,687 - 22,561,487 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1622,537,056 - 22,561,496 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01622,432,084 - 22,455,950 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41622,533,105 - 22,556,905 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11622,532,512 - 22,556,890 (-)NCBI
Celera1620,988,473 - 21,012,282 (-)NCBICelera
RH 3.4 Map16252.82RGD
Cytogenetic Map16p14NCBI
Lpl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540343,646,084 - 43,673,967 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540343,646,084 - 43,672,116 (+)NCBIChiLan1.0ChiLan1.0
LPL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2738,421,240 - 38,449,424 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1814,146,772 - 14,174,992 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0819,164,541 - 19,193,100 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1816,113,415 - 16,142,113 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl816,113,415 - 16,142,966 (+)Ensemblpanpan1.1panPan2
LPL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12537,078,306 - 37,102,729 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2537,079,756 - 37,102,700 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2537,670,851 - 37,695,657 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02537,307,488 - 37,333,689 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2537,305,811 - 37,333,670 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12537,243,904 - 37,268,469 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02537,086,270 - 37,110,850 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02537,256,141 - 37,280,964 (-)NCBIUU_Cfam_GSD_1.0
Lpl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494314,462,292 - 14,486,414 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365554,084,099 - 4,108,365 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365554,084,099 - 4,108,219 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LPL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl144,104,772 - 4,135,814 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1144,104,761 - 4,134,964 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Pig Cytomap14q12-q14NCBI
LPL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1818,009,049 - 18,038,315 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl818,009,093 - 18,038,598 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605224,205,476 - 24,235,020 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lpl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475815,651,992 - 15,680,762 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475815,652,553 - 15,680,107 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in LPL
812 total Variants

1 to 10 of 922 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_000237.3(LPL):c.*1671T>C single nucleotide variant High density lipoprotein cholesterol level quantitative trait locus 11 [RCV000033176]|Hyperlipoproteinemia, type I [RCV000353989]|not provided [RCV001519438] Chr8:19966981 [GRCh38]
Chr8:19824492 [GRCh37]
Chr8:8p21.3
association|benign
NM_000237.3(LPL):c.607G>A (p.Ala203Thr) single nucleotide variant Hyperlipoproteinemia, type I [RCV000001583] Chr8:19954185 [GRCh38]
Chr8:19811696 [GRCh37]
Chr8:8p21.3
pathogenic
LPL, INS insertion Hyperlipoproteinemia, type I [RCV000001584] Chr8:8p22 pathogenic
NM_000237.3(LPL):c.898_1019-1234dup duplication Hyperlipoproteinemia, type I [RCV000001585] Chr8:19955962..19955963 [GRCh38]
Chr8:19813473..19813474 [GRCh37]
Chr8:8p21.3
pathogenic
NM_000237.3(LPL):c.644G>A (p.Gly215Glu) single nucleotide variant Cardiovascular phenotype [RCV002362549]|Hyperlipidemia, familial combined, LPL related [RCV000763181]|Hyperlipidemia, familial combined, LPL related [RCV001248904]|Hyperlipoproteinemia, type I [RCV000001586]|LPL-related disorder [RCV003415622]|not provided [RCV000521241] Chr8:19954222 [GRCh38]
Chr8:19811733 [GRCh37]
Chr8:8p21.3
pathogenic|likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance
NG_008855.2:g.(51625_55052)_(57638_59124)del deletion Hyperlipoproteinemia, type I [RCV000001587] Chr8:8p22 pathogenic
NM_000237.3(LPL):c.397C>T (p.Gln133Ter) single nucleotide variant Hyperlipoproteinemia, type I [RCV000001588]|not provided [RCV001385518] Chr8:19951916 [GRCh38]
Chr8:19809427 [GRCh37]
Chr8:8p21.3
pathogenic|likely pathogenic
NM_000237.3(LPL):c.811T>A (p.Ser271Thr) single nucleotide variant Hyperlipoproteinemia, type I [RCV000001589] Chr8:19955876 [GRCh38]
Chr8:19813387 [GRCh37]
Chr8:8p21.3
pathogenic
NM_000237.3(LPL):c.250-1G>A single nucleotide variant Hyperlipoproteinemia, type I [RCV000001590] Chr8:19951768 [GRCh38]
Chr8:19809279 [GRCh37]
Chr8:8p21.3
pathogenic
NM_000237.3(LPL):c.701C>T (p.Pro234Leu) single nucleotide variant Cardiovascular phenotype [RCV002362550]|Hyperlipidemia, familial combined, LPL related [RCV001253353]|Hyperlipidemia, familial combined, LPL related [RCV005049309]|Hyperlipoproteinemia, type I [RCV000001591]|LPL-related disorder [RCV003964785]|not provided [RCV001851555] Chr8:19954279 [GRCh38]
Chr8:19811790 [GRCh37]
Chr8:8p21.3
pathogenic|likely pathogenic
1 to 10 of 922 rows

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR29Ahsa-miR-29a-3pMirtarbaseexternal_infoELISA//Luciferase reporter assay//qRT-PCR//WesternFunctional MTI21276447

Predicted Target Of
Summary Value
Count of predictions:2174
Count of miRNA genes:899
Interacting mature miRNAs:1063
Transcripts:ENST00000311322, ENST00000519773, ENST00000520959, ENST00000521994, ENST00000522701, ENST00000523696, ENST00000524029
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 1025 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
407097411GWAS746387_Hphospholipids:total lipids ratio QTL GWAS746387 (human)2e-50phospholipids:total lipids ratio81996181719961818Human
597105559GWAS1201633_Hreticulocyte count QTL GWAS1201633 (human)1e-25reticulocyte quantity (VT:0003135)total reticulocyte count (CMO:0003020)81996698119966982Human
597093271GWAS1189345_Hhigh density lipoprotein cholesterol measurement QTL GWAS1189345 (human)0.0000006high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81996221319962214Human
407023680GWAS672656_Hcholesteryl esters to total lipids in very large VLDL percentage QTL GWAS672656 (human)1e-80cholesteryl esters to total lipids in very large VLDL percentage 81996181719961818Human
597187482GWAS1283556_Hphospholipids:total lipids ratio QTL GWAS1283556 (human)1e-99phospholipids:total lipids ratio81996715619967157Human
597025686GWAS1121760_Halcohol drinking, high density lipoprotein cholesterol measurement QTL GWAS1121760 (human)3e-225alcohol drinking, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81995804519958046Human
597578648GWAS1635508_Hfamilial lipoprotein lipase deficiency QTL GWAS1635508 (human)3e-115familial lipoprotein lipase deficiency81996613719966138Human
597244816GWAS1340890_Hhigh density lipoprotein cholesterol measurement QTL GWAS1340890 (human)7e-220high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81995601819956019Human
597285776GWAS1381850_Homega-6 polyunsaturated fatty acid measurement QTL GWAS1381850 (human)4e-15omega-6 polyunsaturated fatty acid measurement81995834119958342Human
407148617GWAS797593_Hvery low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS797593 (human)1e-20very low density lipoprotein cholesterol measurement81996289419962895Human

1 to 10 of 1025 rows
RH36522  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,823,351 - 19,823,544UniSTSGRCh37
Build 36819,867,631 - 19,867,824RGDNCBI36
Celera818,786,439 - 18,786,632RGD
Cytogenetic Map8p22UniSTS
HuRef818,363,583 - 18,363,776UniSTS
GeneMap99-GB4 RH Map864.82UniSTS
RH70259  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,824,440 - 19,824,604UniSTSGRCh37
Build 36819,868,720 - 19,868,884RGDNCBI36
Celera818,787,528 - 18,787,692RGD
Cytogenetic Map8p22UniSTS
HuRef818,364,672 - 18,364,836UniSTS
GeneMap99-GB4 RH Map881.83UniSTS
D8S1948  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,822,892 - 19,823,002UniSTSGRCh37
Build 36819,867,172 - 19,867,282RGDNCBI36
Celera818,785,980 - 18,786,090RGD
Cytogenetic Map8p22UniSTS
HuRef818,363,124 - 18,363,234UniSTS
Whitehead-YAC Contig Map8 UniSTS
SHGC-85707  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,820,064 - 19,820,336UniSTSGRCh37
Build 36819,864,344 - 19,864,616RGDNCBI36
Celera818,783,151 - 18,783,423RGD
Cytogenetic Map8p22UniSTS
HuRef818,360,296 - 18,360,568UniSTS
TNG Radiation Hybrid Map810306.0UniSTS
GDB:177387  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,815,450 - 19,815,576UniSTSGRCh37
Build 36819,859,730 - 19,859,856RGDNCBI36
Celera818,778,546 - 18,778,668RGD
Cytogenetic Map8p22UniSTS
HuRef818,355,687 - 18,355,809UniSTS
GDB:182360  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,818,503 - 19,819,658UniSTSGRCh37
Build 36819,862,783 - 19,863,938RGDNCBI36
Celera818,781,592 - 18,782,745RGD
Cytogenetic Map8p22UniSTS
HuRef818,358,737 - 18,359,890UniSTS
GDB:189516  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,819,607 - 19,819,747UniSTSGRCh37
Build 36819,863,887 - 19,864,027RGDNCBI36
Celera818,782,694 - 18,782,834RGD
Cytogenetic Map8p22UniSTS
HuRef818,359,839 - 18,359,979UniSTS
GDB:191079  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,819,267 - 19,819,754UniSTSGRCh37
Build 36819,863,547 - 19,864,034RGDNCBI36
Celera818,782,354 - 18,782,841RGD
Cytogenetic Map8p22UniSTS
HuRef818,359,499 - 18,359,986UniSTS
GDB:212664  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,815,452 - 19,815,572UniSTSGRCh37
Build 36819,859,732 - 19,859,852RGDNCBI36
Celera818,778,548 - 18,778,664RGD
Cytogenetic Map8p22UniSTS
HuRef818,355,689 - 18,355,805UniSTS
GDB:285016  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,815,031 - 19,815,349UniSTSGRCh37
Build 36819,859,311 - 19,859,629RGDNCBI36
Celera818,778,127 - 18,778,445RGD
Cytogenetic Map8p22UniSTS
HuRef818,355,268 - 18,355,586UniSTS
GDB:623664  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,796,245 - 19,796,808UniSTSGRCh37
Build 36819,840,525 - 19,841,088RGDNCBI36
Celera818,759,341 - 18,759,904RGD
Cytogenetic Map8p22UniSTS
HuRef818,336,483 - 18,337,046UniSTS
STS-M15856  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,824,501 - 19,824,667UniSTSGRCh37
Build 36819,868,781 - 19,868,947RGDNCBI36
Celera818,787,589 - 18,787,755RGD
Cytogenetic Map8p22UniSTS
HuRef818,364,733 - 18,364,899UniSTS
GeneMap99-GB4 RH Map882.06UniSTS
LPL  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,811,639 - 19,811,799UniSTSGRCh37
Build 36819,855,919 - 19,856,079RGDNCBI36
Celera818,774,735 - 18,774,895RGD
HuRef818,351,876 - 18,352,036UniSTS
LPL_4009  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,823,980 - 19,824,786UniSTSGRCh37
Build 36819,868,260 - 19,869,066RGDNCBI36
Celera818,787,068 - 18,787,874RGD
HuRef818,364,212 - 18,365,018UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2353 2788 2232 4939 1705 2254 4 610 1455 449 2254 6709 5979 43 3709 1 814 1692 1538 168 1


1 to 30 of 33 rows
RefSeq Transcripts NG_008855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_000237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC100802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC107964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF050163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK092286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK222464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY092404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY092405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT006726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR457054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA485210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ083390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU557518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY448281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M15856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M26380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M29549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M76722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S58235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S76076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S76077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S78266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X14390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 33 rows

Ensembl Acc Id: ENST00000519773   ⟹   ENSP00000431028
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,939,256 - 19,948,303 (+)Ensembl
Ensembl Acc Id: ENST00000520959   ⟹   ENSP00000428496
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,901,717 - 19,954,151 (+)Ensembl
Ensembl Acc Id: ENST00000521994
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,939,256 - 19,951,828 (+)Ensembl
Ensembl Acc Id: ENST00000522701   ⟹   ENSP00000428557
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,938,933 - 19,951,836 (+)Ensembl
Ensembl Acc Id: ENST00000523696
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,939,372 - 19,948,485 (+)Ensembl
Ensembl Acc Id: ENST00000524029   ⟹   ENSP00000428237
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,938,870 - 19,951,908 (+)Ensembl
Ensembl Acc Id: ENST00000650287   ⟹   ENSP00000497642
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,939,253 - 19,967,259 (+)Ensembl
Ensembl Acc Id: ENST00000650478   ⟹   ENSP00000497560
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl819,956,005 - 19,967,196 (+)Ensembl
RefSeq Acc Id: NM_000237   ⟹   NP_000228
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,939,253 - 19,967,259 (+)NCBI
GRCh37819,796,582 - 19,824,770 (+)ENTREZGENE
Build 36819,840,862 - 19,869,050 (+)NCBI Archive
HuRef818,336,820 - 18,365,002 (+)ENTREZGENE
CHM1_1819,998,390 - 20,026,574 (+)NCBI
T2T-CHM13v2.0820,204,296 - 20,232,297 (+)NCBI
Sequence:
RefSeq Acc Id: NP_000228   ⟸   NM_000237
- Peptide Label: precursor
- UniProtKB: Q16283 (UniProtKB/Swiss-Prot),   Q16282 (UniProtKB/Swiss-Prot),   B2R5T9 (UniProtKB/Swiss-Prot),   Q96FC4 (UniProtKB/Swiss-Prot),   P06858 (UniProtKB/Swiss-Prot),   A0A1B1RVA9 (UniProtKB/TrEMBL),   A8K2M5 (UniProtKB/TrEMBL),   Q53HW6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000431028   ⟸   ENST00000519773
Ensembl Acc Id: ENSP00000497560   ⟸   ENST00000650478
Ensembl Acc Id: ENSP00000497642   ⟸   ENST00000650287
Ensembl Acc Id: ENSP00000428496   ⟸   ENST00000520959
Lipase   PLAT

Name Modeler Protein Id AA Range Protein Structure
AF-P06858-F1-model_v2 AlphaFold P06858 1-475 view protein structure

RGD ID:6806844
Promoter ID:HG_KWN:60843
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   NB4
Transcripts:OTTHUMT00000089113
Position:
Human AssemblyChrPosition (strand)Source
Build 36819,840,894 - 19,841,394 (+)MPROMDB
RGD ID:6852106
Promoter ID:EP73859
Type:multiple initiation site
Name:HS_LPL
Description:Lipoprotein lipase.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:NEDO full length human cDNA sequencing project.; Oligo-capping
Position:
Human AssemblyChrPosition (strand)Source
Build 36819,841,047 - 19,841,107EPD
RGD ID:7212747
Promoter ID:EPDNEW_H12119
Type:initiation region
Name:LPL_1
Description:lipoprotein lipase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,939,253 - 19,939,313EPDNEW


1 to 40 of 53 rows
Database
Acc Id
Source(s)
COSMIC LPL COSMIC
Ensembl Genes ENSG00000175445 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000650287 ENTREZGENE
  ENST00000650287.1 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot
  PLAT/LH2 domain UniProtKB/Swiss-Prot
GTEx ENSG00000175445 GTEx
HGNC ID HGNC:6677 ENTREZGENE
Human Proteome Map LPL Human Proteome Map
InterPro AB_hydrolase UniProtKB/Swiss-Prot
  Lipase/vitellogenin UniProtKB/Swiss-Prot
  Lipase_LIPH UniProtKB/Swiss-Prot
  Lipase_N UniProtKB/Swiss-Prot
  Lipo_Lipase UniProtKB/Swiss-Prot
  PLAT/LH2_dom UniProtKB/Swiss-Prot
  PLAT/LH2_dom_sf UniProtKB/Swiss-Prot
  TAG_lipase UniProtKB/Swiss-Prot
KEGG Report hsa:4023 UniProtKB/Swiss-Prot
NCBI Gene 4023 ENTREZGENE
OMIM 609708 OMIM
PANTHER PTHR11610 UniProtKB/Swiss-Prot
  PTHR11610:SF3 UniProtKB/Swiss-Prot
Pfam Lipase UniProtKB/Swiss-Prot
  PLAT UniProtKB/Swiss-Prot
PharmGKB LPL RGD, PharmGKB
PIRSF Lipoprotein_lipase_LIPH UniProtKB/Swiss-Prot
PRINTS LIPOLIPASE UniProtKB/Swiss-Prot
  TAGLIPASE UniProtKB/Swiss-Prot
PROSITE LIPASE_SER UniProtKB/Swiss-Prot
  PLAT UniProtKB/Swiss-Prot
SMART LH2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49723 UniProtKB/Swiss-Prot
  SSF53474 UniProtKB/Swiss-Prot
UniProt A0A1B1RVA9 ENTREZGENE, UniProtKB/TrEMBL
  A0A3B3IT60_HUMAN UniProtKB/TrEMBL
  A0A6B9JFD6_HUMAN UniProtKB/TrEMBL
  A8K2M5 ENTREZGENE, UniProtKB/TrEMBL
  B2R5T9 ENTREZGENE
  E5RHN7_HUMAN UniProtKB/TrEMBL
  E5RJI0_HUMAN UniProtKB/TrEMBL
1 to 40 of 53 rows