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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | visual epilepsy | | ISO | RGD:1348469 | 8554872 | ClinVar Annotator: match by term: Seizure | ClinVar | | |
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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | visual epilepsy | | ISO | RGD:1348469 | 8554872 | ClinVar Annotator: match by term: Seizure | ClinVar | | |
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1. | Birger Y, etal., Blood. 2013 Aug 8;122(6):988-98. doi: 10.1182/blood-2012-10-460998. Epub 2013 May 29. |
2. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
3. | Manaud G, etal., Am J Respir Cell Mol Biol. 2020 Jul;63(1):118-131. doi: 10.1165/rcmb.2019-0015OC. |
4. | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
5. | RGD automated data pipeline |
6. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
7. | RGD automated import pipeline for gene-chemical interactions |
8. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
PMID:17289661 | PMID:18195090 | PMID:22235125 | PMID:22932696 | PMID:23093599 | PMID:23913826 |
Erg (Rattus norvegicus - Norway rat) |
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ERG (Homo sapiens - human) |
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Erg (Mus musculus - house mouse) |
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Erg (Chinchilla lanigera - long-tailed chinchilla) |
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ERG (Pan paniscus - bonobo/pygmy chimpanzee) |
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ERG (Canis lupus familiaris - dog) |
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Erg (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ERG (Sus scrofa - pig) |
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ERG (Chlorocebus sabaeus - green monkey) |
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Erg (Heterocephalus glaber - naked mole-rat) |
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RH140783 |
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MARC_15619-15620:1017174255:3 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 29 | 4 | 4 | 5 | 4 | 22 | 20 | 11 | |||||
Low | 3 | 14 | 53 | 37 | 14 | 37 | 8 | 11 | 74 | 13 | 21 | 8 | |
Below cutoff |
RefSeq Transcripts | NM_133397 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006248142 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006248143 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006248145 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039087928 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039087929 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039087930 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039087931 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039087932 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039087933 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AB031088 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC072519 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH474083 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ217228 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JACYVU010000222 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000039999 ⟹ ENSRNOP00000047414 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000078425 ⟹ ENSRNOP00000069853 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000078818 ⟹ ENSRNOP00000070629 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000110871 ⟹ ENSRNOP00000078490 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000118689 ⟹ ENSRNOP00000079399 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000119400 ⟹ ENSRNOP00000090227 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_133397 ⟹ NP_596888 | ||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006248142 ⟹ XP_006248204 | ||||||||||||||||
RefSeq Status: | |||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039087928 ⟹ XP_038943856 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039087929 ⟹ XP_038943857 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039087930 ⟹ XP_038943858 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039087931 ⟹ XP_038943859 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039087932 ⟹ XP_038943860 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039087933 ⟹ XP_038943861 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_596888 | (Get FASTA) | NCBI Sequence Viewer |
XP_006248204 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038943856 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038943857 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038943858 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038943859 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038943860 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038943861 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH72519 | (Get FASTA) | NCBI Sequence Viewer |
BAB62744 | (Get FASTA) | NCBI Sequence Viewer | |
EDL76687 | (Get FASTA) | NCBI Sequence Viewer | |
EDL76688 | (Get FASTA) | NCBI Sequence Viewer | |
EDL76689 | (Get FASTA) | NCBI Sequence Viewer | |
EDL76690 | (Get FASTA) | NCBI Sequence Viewer | |
EDL76691 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_596888 ⟸ NM_133397 |
- UniProtKB: | Q91XV5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006248204 ⟸ XM_006248142 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A0G2JWE9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000069853 ⟸ ENSRNOT00000078425 |
RefSeq Acc Id: | ENSRNOP00000047414 ⟸ ENSRNOT00000039999 |
RefSeq Acc Id: | ENSRNOP00000070629 ⟸ ENSRNOT00000078818 |
RefSeq Acc Id: | XP_038943858 ⟸ XM_039087930 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038943856 ⟸ XM_039087928 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038943861 ⟸ XM_039087933 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_038943859 ⟸ XM_039087931 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038943857 ⟸ XM_039087929 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038943860 ⟸ XM_039087932 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | ENSRNOP00000079399 ⟸ ENSRNOT00000118689 |
RefSeq Acc Id: | ENSRNOP00000078490 ⟸ ENSRNOT00000110871 |
RefSeq Acc Id: | ENSRNOP00000090227 ⟸ ENSRNOT00000119400 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-A0A0G2JWE9-F1-model_v2 | AlphaFold | A0A0G2JWE9 | 1-479 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13698082 | ||||||||
Promoter ID: | EPDNEW_R8607 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Erg_1 | ||||||||
Description: | ERG, ETS transcription factor | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Chromosome | Start Pos | End Pos | Reference Nucleotide | Variant Nucleotide | Variant Type | Strain |
11 | 35655358 | 35655359 | T | C | snv | M520/N (MCW), M520/N (2020), M520/NRrrcMcwi (2019) |
Chromosome | Start Pos | End Pos | Reference Nucleotide | Variant Nucleotide | Variant Type | Strain |
11 | 39241051 | 39241052 | T | C | snv | M520/N (KNAW) |
Database | Acc Id | Source(s) |
AGR Gene | RGD:621108 | AgrOrtholog |
BioCyc Gene | G2FUF-21727 | BioCyc |
Ensembl Genes | ENSRNOG00000001652 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Protein | ENSRNOP00000047414 | ENTREZGENE, UniProtKB/TrEMBL |
ENSRNOP00000069853 | ENTREZGENE, UniProtKB/TrEMBL | |
ENSRNOP00000070629 | UniProtKB/TrEMBL | |
ENSRNOP00000078490 | ENTREZGENE | |
ENSRNOP00000079399 | ENTREZGENE | |
ENSRNOP00000090227 | ENTREZGENE | |
Ensembl Transcript | ENSRNOT00000039999 | ENTREZGENE, UniProtKB/TrEMBL |
ENSRNOT00000078425 | ENTREZGENE, UniProtKB/TrEMBL | |
ENSRNOT00000078818 | UniProtKB/TrEMBL | |
ENSRNOT00000110871 | ENTREZGENE | |
ENSRNOT00000118689 | ENTREZGENE | |
ENSRNOT00000119400 | ENTREZGENE | |
Gene3D-CATH | 1.10.10.10 | UniProtKB/TrEMBL |
1.10.150.50 | UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:7105647 | IMAGE-MGC_LOAD |
InterPro | Ets | UniProtKB/TrEMBL |
SAM_PNT | UniProtKB/TrEMBL | |
SAM_type | UniProtKB/TrEMBL | |
WH-like_DNA-bd_sf | UniProtKB/TrEMBL | |
WH_DNA-bd_sf | UniProtKB/TrEMBL | |
KEGG Report | rno:170909 | UniProtKB/TrEMBL |
MGC_CLONE | MGC:91507 | IMAGE-MGC_LOAD |
NCBI Gene | 170909 | ENTREZGENE |
Pfam | Ets | UniProtKB/TrEMBL |
SAM_PNT | UniProtKB/TrEMBL | |
PhenoGen | Erg | PhenoGen |
PRINTS | ETSDOMAIN | UniProtKB/TrEMBL |
PROSITE | ETS_DOMAIN_1 | UniProtKB/TrEMBL |
ETS_DOMAIN_2 | UniProtKB/TrEMBL | |
ETS_DOMAIN_3 | UniProtKB/TrEMBL | |
PNT | UniProtKB/TrEMBL | |
SMART | ETS | UniProtKB/TrEMBL |
SAM_PNT | UniProtKB/TrEMBL | |
Superfamily-SCOP | SAM_homology | UniProtKB/TrEMBL |
SSF46785 | UniProtKB/TrEMBL | |
UniProt | A0A0G2JWE9 | ENTREZGENE, UniProtKB/TrEMBL |
D4A3D6_RAT | UniProtKB/TrEMBL | |
Q6IMZ7_RAT | UniProtKB/TrEMBL | |
Q91XV5 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2018-08-24 | Erg | ETS transcription factor ERG | Erg | ERG, ETS transcription factor | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2016-07-26 | Erg | ERG, ETS transcription factor | Erg | v-ets avian erythroblastosis virus E26 oncogene | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2013-07-18 | Erg | v-ets avian erythroblastosis virus E26 oncogene | Erg | v-ets erythroblastosis virus E26 oncogene homolog (avian) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2009-12-15 | Erg | v-ets erythroblastosis virus E26 oncogene homolog (avian) | Erg | avian erythroblastosis virus E-26 (v-ets) oncogene related | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-02-22 | Erg | avian erythroblastosis virus E-26 (v-ets) oncogene related | Erg | v-ets erythroblastosis virus E26 oncogene like (avian) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-01-20 | Erg | v-ets erythroblastosis virus E26 oncogene like (avian) | Symbol and Name status set to approved | 1299863 | APPROVED | ||
2002-08-07 | Erg | v-ets erythroblastosis virus E26 oncogene like (avian) | Symbol and Name status set to provisional | 70820 | PROVISIONAL |