Gene: Tub (tubby bipartite transcription factor) Rattus norvegicus
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Symbol: Tub
Name: tubby bipartite transcription factor
Description: ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN response to hormone; phagocytosis, recognition (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH obesity (ortholog); Retinal Dystrophy and Obesity (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; ammonium chloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Tubby (mouse) homolog; tubby homolog (mouse); tubby protein homolog
Orthologs:
Homo sapiens (human) : TUB (tubby bipartite transcription factor)  HGNC  Alliance
Mus musculus (house mouse) : Tub (tubby bipartite transcription factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tub (tubby bipartite transcription factor)
Pan paniscus (bonobo/pygmy chimpanzee) : TUB (tubby bipartite transcription factor)
Canis lupus familiaris (dog) : TUB (tubby bipartite transcription factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tub (tubby bipartite transcription factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01173,550,929 - 173,629,550 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01180,541,359 - 180,618,745 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1160,923,600 - 160,933,169 (+)NCBICelera
Cytogenetic Map1q33NCBI
RH 3.4 Map11355.4RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tub
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3918
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE