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Gene: Apoc1 (apolipoprotein C1) Rattus norvegicus
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Symbol: Apoc1
Name: apolipoprotein C1
Description: Predicted to have fatty acid binding activity and phospholipase inhibitor activity. Involved in regulation of lipid transport. Localizes to the high-density lipoprotein particle and very-low-density lipoprotein particle. Human ortholog(s) of this gene implicated in Alzheimer's disease and obesity. Orthologous to human APOC1 (apolipoprotein C1); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; INTERACTS WITH 17alpha-ethynylestradiol; 3-methylcholanthrene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ALPCI; apo-CI; Apo-CIB; apoC-I; ApoC-IB; apolipoprotein C-I; liver regeneration-related protein LRRG04; LRRG04
Orthologs:
Homo sapiens (human) : APOC1 (apolipoprotein C1)  HGNC  Alliance
Mus musculus (house mouse) : Apoc1 (apolipoprotein C-I)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Apoc1 (apolipoprotein C1)
Pan paniscus (bonobo/pygmy chimpanzee) : APOC1 (apolipoprotein C1)
Canis lupus familiaris (dog) : APOC1 (apolipoprotein C1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Apoc1 (apolipoprotein C1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0180,606,638 - 80,609,921 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0181,872,116 - 81,875,399 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,996,677 - 78,999,960 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1179,074,789 - 79,077,986 (-)NCBI
Celera173,806,255 - 73,809,538 (-)NCBICelera
Cytogenetic Map1 NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Apoc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2134
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.