LOC100994952 (apolipoprotein C-I, acidic form) - Rat Genome Database

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Gene: LOC100994952 (apolipoprotein C-I, acidic form) Pan paniscus
Analyze
Symbol: LOC100994952
Name: apolipoprotein C-I, acidic form
RGD ID: 11736129
Description: ENCODES a protein that exhibits fatty acid binding (inferred); phospholipase inhibitor activity (inferred); INVOLVED IN cholesterol metabolic process (ortholog); regulation of lipid transport (ortholog); triglyceride metabolic process (ortholog); FOUND IN high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: APOC1; apolipoprotein C-I; apolipoprotein C1; C1q-related factor; LOC106634117; uncharacterized LOC106634117
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,084,361 - 51,104,382 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11952,956,135 - 52,961,814 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01941,862,168 - 41,878,231 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11950,468,337 - 50,480,967 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_055103719   ⟹   XP_054959694
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,084,361 - 51,104,382 (+)NCBI
NHGRI_mPanPan11952,956,135 - 52,961,814 (+)NCBI
RefSeq Acc Id: XM_063600387   ⟹   XP_063456457
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,084,416 - 51,104,382 (+)NCBI
RefSeq Acc Id: XM_063600388   ⟹   XP_063456458
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,085,385 - 51,104,382 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054959694 (Get FASTA)   NCBI Sequence Viewer  
  XP_063456457 (Get FASTA)   NCBI Sequence Viewer  
  XP_063456458 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_054959694   ⟸   XM_055103719
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063456457   ⟸   XM_063600387
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063456458   ⟸   XM_063600388
- Peptide Label: isoform X3
- UniProtKB: P86336 (UniProtKB/Swiss-Prot)


Additional Information

Database Acc Id Source(s)
Gene3D-CATH Apolipoprotein C-I UniProtKB/Swiss-Prot
InterPro ApoC-1_sf UniProtKB/Swiss-Prot
  ApoC-I UniProtKB/Swiss-Prot
NCBI Gene APOC1 ENTREZGENE
PANTHER APOLIPOPROTEIN C-I UniProtKB/Swiss-Prot
  APOLIPOPROTEIN C-I, ACIDIC FORM UniProtKB/Swiss-Prot
Pfam ApoC-I UniProtKB/Swiss-Prot
UniProt APO1A_PANPA UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-02 LOC100994952  apolipoprotein C-I, acidic form  APOC1  apolipoprotein C1  Symbol and/or name change 5135510 APPROVED
2018-05-08 APOC1  apolipoprotein C1  LOC106634117  uncharacterized LOC106634117  Data merged from RGD:11915972 737654 PROVISIONAL