Nbeal1 (neurobeachin-like 1) - Rat Genome Database

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Gene: Nbeal1 (neurobeachin-like 1) Rattus norvegicus
Analyze
Symbol: Nbeal1
Name: neurobeachin-like 1
RGD ID: 1594799
Description: Predicted to enable protein kinase binding activity. Predicted to be involved in protein localization. Predicted to be active in cytosol and membrane. Orthologous to human NBEAL1 (neurobeachin like 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Als2cr16; amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 16; LOC689240; LOC689253; Nbeal1-ps1; neurobeachin like 1; neurobeachin-like 1, pseudogene 1; neurobeachin-like protein 1; similar to amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 16; similar to neurobeachin-like 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8969,069,326 - 69,237,932 (+)NCBIGRCr8
mRatBN7.2961,575,154 - 61,743,896 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl961,575,356 - 61,736,750 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0966,951,354 - 67,113,395 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl966,952,720 - 67,110,693 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0966,764,525 - 66,924,459 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4958,715,343 - 58,887,980 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera959,006,993 - 59,166,948 (+)NCBICelera
Cytogenetic Map9q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nbeal1Ratautoimmune lymphoproliferative syndrome type 2B  ISONBEAL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Autoimmune lymphoproliferative syndrome type 2BClinVarPMID:11343122 more ...
Nbeal1RatAutoimmune Lymphoproliferative Syndrome, Type V  ISONBEAL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Autoimmune lymphoproliferative syndrome type VClinVarPMID:11343122 more ...
Nbeal1Ratcommon variable immunodeficiency 1  ISONBEAL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Immunodeficiency more ...ClinVarPMID:11343122 more ...
Nbeal1RatNeurodevelopmental Disorders  ISONBEAL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Nbeal1Ratprimary pulmonary hypertension  ISONBEAL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Primary pulmonary hypertensionClinVarPMID:28492532 and PMID:31727138
Nbeal1RatPulmonary Arterial Hypertension  ISONBEAL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Pulmonary arterial hypertensionClinVarPMID:32581362
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nbeal1Ratcoronary artery disease  ISONBEAL1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:34961328

1 to 20 of 62 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nbeal1Rat(-)-epigallocatechin 3-gallate multiple interactionsISONBEAL1 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of NBEAL1 mRNACTDPMID:22079256
Nbeal1Rat1,2-dichloroethane increases expressionISONbeal1 (Mus musculus)6480464ethylene dichloride results in increased expression of NBEAL1 mRNACTDPMID:28960355
Nbeal1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISONbeal1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of NBEAL1 mRNACTDPMID:21570461
Nbeal1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of NBEAL1 mRNACTDPMID:32109520
Nbeal1Rat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642 more ...CTDPMID:32109520
Nbeal1Rat3,4-methylenedioxymethamphetamine decreases expressionISONbeal1 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of NBEAL1 mRNACTDPMID:26251327
Nbeal1Rat4,4'-diaminodiphenylmethane increases expressionISONbeal1 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in increased expression of NBEAL1 mRNACTDPMID:18648102
Nbeal1Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of NBEAL1 mRNACTDPMID:30047161
Nbeal1Rataflatoxin B1 increases expressionISONbeal1 (Mus musculus)6480464Aflatoxin B1 results in increased expression of NBEAL1 mRNACTDPMID:19770486
Nbeal1Rataflatoxin B1 decreases expressionISONBEAL1 (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of NBEAL1 mRNACTDPMID:22100608
Nbeal1Ratamitrole decreases expressionEXP 6480464Amitrole results in decreased expression of NBEAL1 mRNACTDPMID:30047161
Nbeal1Ratantirheumatic drug increases expressionISONBEAL1 (Homo sapiens)6480464Antirheumatic Agents results in increased expression of NBEAL1 mRNACTDPMID:24449571
Nbeal1Ratarsane multiple interactionsISONBEAL1 (Homo sapiens)6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in decreased expression of NBEAL1 mRNACTDPMID:39836092
Nbeal1Ratarsenic atom multiple interactionsISONBEAL1 (Homo sapiens)6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in decreased expression of NBEAL1 mRNACTDPMID:39836092
Nbeal1Ratarsenite(3-) multiple interactionsISONBEAL1 (Homo sapiens)6480464arsenite inhibits the reaction [G3BP1 protein binds to NBEAL1 mRNA]CTDPMID:32406909
Nbeal1Ratatrazine decreases expressionEXP 6480464Atrazine results in decreased expression of NBEAL1 mRNACTDPMID:36841081
Nbeal1Ratbenzo[a]pyrene decreases expressionISONbeal1 (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of NBEAL1 mRNACTDPMID:19770486
Nbeal1Ratbenzo[b]fluoranthene decreases expressionISONbeal1 (Mus musculus)6480464benzo(b)fluoranthene results in decreased expression of NBEAL1 mRNACTDPMID:26377693
Nbeal1Ratbisphenol A multiple interactionsISONbeal1 (Mus musculus)6480464[bisphenol A co-treated with LIF protein] results in decreased expression of NBEAL1 mRNACTDPMID:30951980
Nbeal1Ratbisphenol F increases expressionISONbeal1 (Mus musculus)6480464bisphenol F results in increased expression of NBEAL1 mRNACTDPMID:38685157

1 to 20 of 62 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nbeal1Ratprotein localization involved_inIBAMGI:1347075 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nbeal1Ratcytosol is_active_inIBAMGI:1347075 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Nbeal1Ratmembrane is_active_inIBAFB:FBgn0266098 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nbeal1Ratprotein kinase binding enablesIBAMGI:1347075 and PANTHER:PTN0003487431600115GO_REF:0000033GO_CentralGO_REF:0000033


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions


Nbeal1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8969,069,326 - 69,237,932 (+)NCBIGRCr8
mRatBN7.2961,575,154 - 61,743,896 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl961,575,356 - 61,736,750 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0966,951,354 - 67,113,395 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl966,952,720 - 67,110,693 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0966,764,525 - 66,924,459 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4958,715,343 - 58,887,980 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera959,006,993 - 59,166,948 (+)NCBICelera
Cytogenetic Map9q32NCBI
NBEAL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382203,014,608 - 203,225,194 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2203,014,608 - 203,226,378 (+)EnsemblGRCh38hg38GRCh38
GRCh372203,879,598 - 204,089,917 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362203,708,718 - 203,790,962 (+)NCBINCBI36Build 36hg18NCBI36
Build 342203,825,978 - 203,908,223NCBI
Celera2197,632,559 - 197,835,669 (+)NCBICelera
Cytogenetic Map2q33.2NCBI
HuRef2195,727,171 - 195,930,878 (+)NCBIHuRef
CHM1_12203,886,248 - 204,089,297 (+)NCBICHM1_1
T2T-CHM13v2.02203,493,127 - 203,706,697 (+)NCBIT2T-CHM13v2.0
Nbeal1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39160,217,910 - 60,377,487 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl160,219,758 - 60,377,487 (+)EnsemblGRCm39 Ensembl
GRCm38160,178,740 - 60,338,328 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl160,180,599 - 60,338,328 (+)EnsemblGRCm38mm10GRCm38
MGSCv37160,237,443 - 60,391,549 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36160,125,145 - 60,279,625 (+)NCBIMGSCv36mm8
Celera160,696,452 - 60,850,379 (+)NCBICelera
Cytogenetic Map1C2NCBI
cM Map130.46NCBI
Nbeal1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545711,671,565 - 11,839,211 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545711,671,565 - 11,839,357 (-)NCBIChiLan1.0ChiLan1.0
NBEAL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213105,622,900 - 105,831,890 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B105,637,882 - 105,846,881 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B90,250,567 - 90,459,507 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B208,394,443 - 208,595,862 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B208,395,950 - 208,594,273 (+)Ensemblpanpan1.1panPan2
NBEAL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13711,895,127 - 12,072,613 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3711,895,219 - 12,065,380 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3712,778,222 - 12,955,986 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03711,832,117 - 12,010,152 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3711,832,227 - 12,004,911 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13711,788,460 - 11,966,205 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03711,759,597 - 11,937,333 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03711,753,569 - 11,931,613 (+)NCBIUU_Cfam_GSD_1.0
Nbeal1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303160,074,829 - 160,253,343 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367262,045,191 - 2,224,251 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367262,045,202 - 2,224,477 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NBEAL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15106,517,304 - 106,680,337 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115106,516,002 - 106,686,685 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215117,963,910 - 118,006,848 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NBEAL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11088,763,320 - 88,965,040 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1088,764,111 - 88,963,364 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040110,417,861 - 110,624,638 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nbeal1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476513,176,944 - 13,380,292 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476513,176,362 - 13,380,414 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Nbeal1
554 total Variants

Predicted Target Of
Summary Value
Count of predictions:28
Count of miRNA genes:22
Interacting mature miRNAs:28
Transcripts:ENSRNOT00000023678
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 30 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)94996854671098346Rat

1 to 10 of 30 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 16 of 16 rows
RefSeq Transcripts XM_003754520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008758031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010055002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 16 of 16 rows

Ensembl Acc Id: ENSRNOT00000023678   ⟹   ENSRNOP00000023678
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl961,588,464 - 61,736,750 (+)Ensembl
Rnor_6.0 Ensembl966,952,720 - 67,110,693 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000102004   ⟹   ENSRNOP00000083302
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl961,575,356 - 61,736,750 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117882   ⟹   ENSRNOP00000097079
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl961,575,356 - 61,736,750 (+)Ensembl
RefSeq Acc Id: XM_039084849   ⟹   XP_038940777
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,069,326 - 69,237,932 (+)NCBI
mRatBN7.2961,575,155 - 61,743,896 (+)NCBI
RefSeq Acc Id: XM_039084850   ⟹   XP_038940778
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,069,657 - 69,237,932 (+)NCBI
mRatBN7.2961,575,430 - 61,743,896 (+)NCBI
RefSeq Acc Id: XM_039084851   ⟹   XP_038940779
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,069,327 - 69,237,932 (+)NCBI
mRatBN7.2961,575,155 - 61,743,896 (+)NCBI
RefSeq Acc Id: XM_039084852   ⟹   XP_038940780
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,069,326 - 69,237,932 (+)NCBI
mRatBN7.2961,575,156 - 61,743,896 (+)NCBI
RefSeq Acc Id: XM_039084853   ⟹   XP_038940781
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,083,069 - 69,237,932 (+)NCBI
mRatBN7.2961,589,030 - 61,743,896 (+)NCBI
RefSeq Acc Id: XM_063268124   ⟹   XP_063124194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,069,536 - 69,237,932 (+)NCBI
RefSeq Acc Id: XM_063268125   ⟹   XP_063124195
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,069,682 - 69,237,932 (+)NCBI
RefSeq Acc Id: XM_063268126   ⟹   XP_063124196
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,127,381 - 69,237,932 (+)NCBI
RefSeq Acc Id: XR_010055002
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8969,069,326 - 69,200,091 (+)NCBI
1 to 5 of 11 rows
1 to 5 of 11 rows
Ensembl Acc Id: ENSRNOP00000023678   ⟸   ENSRNOT00000023678
RefSeq Acc Id: XP_038940777   ⟸   XM_039084849
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AQT8 (UniProtKB/TrEMBL),   A6IPC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940779   ⟸   XM_039084851
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AQT8 (UniProtKB/TrEMBL),   A6IPC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940780   ⟸   XM_039084852
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZZR5 (UniProtKB/TrEMBL),   A6IPC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940778   ⟸   XM_039084850
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AQT8 (UniProtKB/TrEMBL),   A6IPC4 (UniProtKB/TrEMBL)
BEACH   BEACH-type PH

Name Modeler Protein Id AA Range Protein Structure
AF-F1M6V0-F1-model_v2 AlphaFold F1M6V0 1-2690 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 40 of 48 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-27383 BioCyc
Ensembl Genes ENSRNOG00000021525 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000023678 ENTREZGENE
  ENSRNOT00000023678.8 UniProtKB/TrEMBL
  ENSRNOT00000102004 ENTREZGENE
  ENSRNOT00000102004.1 UniProtKB/TrEMBL
  ENSRNOT00000117882 ENTREZGENE
  ENSRNOT00000117882.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1540.10 UniProtKB/TrEMBL
  2.130.10.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  2.60.120.200 UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  BEACH_dom UniProtKB/TrEMBL
  BEACH_dom_sf UniProtKB/TrEMBL
  BEACH_Domain UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/TrEMBL
  DUF4704 UniProtKB/TrEMBL
  NBCH_WD40 UniProtKB/TrEMBL
  PH-BEACH_dom UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
NCBI Gene 689253 ENTREZGENE
PANTHER BEIGE/BEACH-RELATED UniProtKB/TrEMBL
  NEUROBEACHIN-LIKE PROTEIN 1 UniProtKB/TrEMBL
Pfam Beach UniProtKB/TrEMBL
  DUF4704 UniProtKB/TrEMBL
  DUF4800 UniProtKB/TrEMBL
  NBCH_WD40 UniProtKB/TrEMBL
  PH_BEACH UniProtKB/TrEMBL
PhenoGen Nbeal1 PhenoGen
PROSITE BEACH UniProtKB/TrEMBL
  PH_BEACH UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000021525 RatGTEx
SMART Beach UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 Nbeal1  neurobeachin-like 1  LOC689240  similar to amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 16  Data merged from RGD:1594812 737654 PROVISIONAL
2013-03-05 Nbeal1  neurobeachin-like 1  Nbeal1-ps1  neurobeachin-like 1, pseudogene 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-06-08 Nbeal1  neurobeachin-like 1, pseudogene 1  Nbeal1-ps1  neurobeachin-like 2, pseudogene 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-06-08 Nbeal1-ps1  neurobeachin-like 2, pseudogene 1  Nbeal1  neurobeachin like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-06-08 Nbeal1-ps1  neurobeachin-like 1  Nbeal1  neurobeachin-like 1, pseudogene 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-06-08 Nbeal1-ps1  neurobeachin-like 1, pseudogene 1  Nbeal1-ps1  neurobeachin-like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Nbeal1  neurobeachin like 1  LOC689253  similar to neurobeachin-like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC689240  similar to amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 16      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC689253  similar to neurobeachin-like 1      Symbol and Name status set to provisional 70820 PROVISIONAL