Nbeal1 (neurobeachin like 1) - Rat Genome Database

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Gene: Nbeal1 (neurobeachin like 1) Heterocephalus glaber
Analyze
Symbol: Nbeal1
Name: neurobeachin like 1
RGD ID: 18920487
Description: ENCODES a protein that exhibits protein kinase binding (inferred); INVOLVED IN protein localization (inferred); ASSOCIATED WITH autoimmune lymphoproliferative syndrome type 2B (ortholog); Autoimmune Lymphoproliferative Syndrome, Type V (ortholog); common variable immunodeficiency 1 (ortholog); FOUND IN cytosol (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neurobeachin-like protein 1; Neurobeachin-like protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476513,176,944 - 13,380,292 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476513,176,362 - 13,380,414 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA)
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Nbeal1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476513,176,944 - 13,380,292 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476513,176,362 - 13,380,414 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
NBEAL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382203,014,608 - 203,225,194 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2203,014,608 - 203,226,378 (+)EnsemblGRCh38hg38GRCh38
GRCh372203,879,598 - 204,089,917 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362203,708,718 - 203,790,962 (+)NCBINCBI36Build 36hg18NCBI36
Build 342203,825,978 - 203,908,223NCBI
Celera2197,632,559 - 197,835,669 (+)NCBICelera
Cytogenetic Map2q33.2NCBI
HuRef2195,727,171 - 195,930,878 (+)NCBIHuRef
CHM1_12203,886,248 - 204,089,297 (+)NCBICHM1_1
T2T-CHM13v2.02203,493,127 - 203,706,697 (+)NCBIT2T-CHM13v2.0
Nbeal1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39160,217,910 - 60,377,487 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl160,219,758 - 60,377,487 (+)EnsemblGRCm39 Ensembl
GRCm38160,178,740 - 60,338,328 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl160,180,599 - 60,338,328 (+)EnsemblGRCm38mm10GRCm38
MGSCv37160,237,443 - 60,391,549 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36160,125,145 - 60,279,625 (+)NCBIMGSCv36mm8
Celera160,696,452 - 60,850,379 (+)NCBICelera
Cytogenetic Map1C2NCBI
cM Map130.46NCBI
Nbeal1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8969,069,326 - 69,237,932 (+)NCBIGRCr8
mRatBN7.2961,575,154 - 61,743,896 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl961,575,356 - 61,736,750 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0966,951,354 - 67,113,395 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl966,952,720 - 67,110,693 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0966,764,525 - 66,924,459 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4958,715,343 - 58,887,980 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera959,006,993 - 59,166,948 (+)NCBICelera
Cytogenetic Map9q32NCBI
Nbeal1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545711,671,565 - 11,839,211 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545711,671,565 - 11,839,357 (-)NCBIChiLan1.0ChiLan1.0
NBEAL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213105,622,900 - 105,831,890 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B105,637,882 - 105,846,881 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B90,250,567 - 90,459,507 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B208,394,443 - 208,595,862 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B208,395,950 - 208,594,273 (+)Ensemblpanpan1.1panPan2
NBEAL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13711,895,127 - 12,072,613 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3711,895,219 - 12,065,380 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3712,778,222 - 12,955,986 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03711,832,117 - 12,010,152 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3711,832,227 - 12,004,911 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13711,788,460 - 11,966,205 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03711,759,597 - 11,937,333 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03711,753,569 - 11,931,613 (+)NCBIUU_Cfam_GSD_1.0
Nbeal1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303160,074,829 - 160,253,343 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367262,045,191 - 2,224,251 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367262,045,202 - 2,224,477 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NBEAL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15106,517,304 - 106,680,337 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115106,516,002 - 106,686,685 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215117,963,910 - 118,006,848 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NBEAL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11088,763,320 - 88,965,040 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1088,764,111 - 88,963,364 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040110,417,861 - 110,624,638 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000006194   ⟹   ENSHGLP00000006119
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476513,176,944 - 13,380,292 (-)Ensembl
RefSeq Acc Id: XM_021263438   ⟹   XP_021119097
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476513,176,362 - 13,380,414 (-)NCBI
Protein Sequences
Protein RefSeqs XP_021119097 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB05486 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000006119
Reference Protein Sequences
RefSeq Acc Id: XP_021119097   ⟸   XM_021263438
- UniProtKB: G5B875 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000006119   ⟸   ENSHGLT00000006194


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004471 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000006194 ENTREZGENE
Gene3D-CATH BEACH domain UniProtKB/TrEMBL
  Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) UniProtKB/TrEMBL
  YVTN repeat-like/Quinoprotein amine dehydrogenase UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  BEACH_dom UniProtKB/TrEMBL
  BEACH_dom_sf UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/TrEMBL
  NBCH_WD40 UniProtKB/TrEMBL
  NBEA/BDCP_DUF4704 UniProtKB/TrEMBL
  PH-BEACH_dom UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
NCBI Gene Nbeal1 ENTREZGENE
PANTHER BEIGE/BEACH-RELATED UniProtKB/TrEMBL
  NEUROBEACHIN-LIKE PROTEIN 1 UniProtKB/TrEMBL
Pfam Beach UniProtKB/TrEMBL
  DUF4704 UniProtKB/TrEMBL
  DUF4800 UniProtKB/TrEMBL
  NBCH_WD40 UniProtKB/TrEMBL
  PH_BEACH UniProtKB/TrEMBL
PROSITE BEACH UniProtKB/TrEMBL
  PH_BEACH UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/TrEMBL
SMART Beach UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
Superfamily-SCOP ARM repeat UniProtKB/TrEMBL
  BEACH domain UniProtKB/TrEMBL
  Concanavalin A-like lectins/glucanases UniProtKB/TrEMBL
  PH domain-like UniProtKB/TrEMBL
  WD40 repeat-like UniProtKB/TrEMBL
UniProt G5B875 ENTREZGENE, UniProtKB/TrEMBL