Ndufa10 (NADH:ubiquinone oxidoreductase subunit A10) - Rat Genome Database

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Gene: Ndufa10 (NADH:ubiquinone oxidoreductase subunit A10) Mus musculus
Analyze
Symbol: Ndufa10
Name: NADH:ubiquinone oxidoreductase subunit A10
RGD ID: 1553782
MGI Page MGI
Description: Enables NADH dehydrogenase (ubiquinone) activity. Acts upstream of or within mitochondrial electron transport, NADH to ubiquinone. Located in mitochondrion and myelin sheath. Part of respiratory chain complex I. Is active in mitochondrial inner membrane. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 22. Orthologous to human NDUFA10 (NADH:ubiquinone oxidoreductase subunit A10).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2900053E13Rik; CI-42kD; complex I-42kD; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; NADH-ubiquinone oxidoreductase 42 kDa subunit
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39192,367,208 - 92,401,547 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl192,366,732 - 92,401,582 (-)EnsemblGRCm39 Ensembl
GRCm38192,439,486 - 92,473,825 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl192,439,010 - 92,473,860 (-)EnsemblGRCm38mm10GRCm38
MGSCv37194,336,285 - 94,370,335 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,270,114 - 94,304,164 (-)NCBIMGSCv36mm8
Celera195,379,073 - 95,413,122 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 13 of 13 rows
Object Symbol
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Source
Original Reference(s)
Ndufa10MouseBethlem Myopathy 1A  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Bethlem myopathy 1AClinVarPMID:26004199 and PMID:28492532
Ndufa10Mousechromosome 2q37 deletion syndrome  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 2q37 deletion syndromeClinVarPMID:25741868
Ndufa10MouseD-2-hydroxyglutaric aciduria 1  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: D-2-hydroxyglutaric aciduria 1ClinVarPMID:16081310 more ...
Ndufa10Mousegenetic disease  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
Ndufa10Mousehereditary spastic paraplegia 30  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary spastic paraplegia 30ClinVarPMID:16081310 more ...
Ndufa10Mouseintellectual disability  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
Ndufa10MouseLeigh disease  ISONDUFA10 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
Ndufa10Mousemitochondrial complex I deficiency  ISONDUFA10 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
Ndufa10Mousenuclear type mitochondrial complex I deficiency 1  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Mitochondrial complex I deficiency and nuclear type 1ClinVarPMID:25741868 and PMID:28492532
Ndufa10Mousenuclear type mitochondrial complex I deficiency 22  ISONDUFA10 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:21150889 more ...
Ndufa10Mouseprimary hyperoxaluria type 1  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Primary hyperoxaluria and type IClinVarPMID:22821680
Ndufa10Mouseschizophrenia  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVar 
Ndufa10MouseSubacute Necrotizing Encephalopathy of Leigh, Infantile  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Leigh's necrotizing encephalopathyClinVarPMID:25741868 and PMID:28492532
1 to 13 of 13 rows
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Source
Original Reference(s)
Ndufa10Mousenuclear type mitochondrial complex I deficiency 22  ISONDUFA10 (Homo sapiens)7240710 OMIM 

1 to 20 of 84 rows

  
Object Symbol
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Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ndufa10Mouse(+)-dexrazoxane multiple interactionsEXP 6480464[Doxorubicin co-treated with Dexrazoxane] results in increased expression of NDUFA10 mRNACTDPMID:26873546
Ndufa10Mouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of NDUFA10 mRNACTDPMID:36331819
Ndufa10Mouse1,2-dimethylhydrazine multiple interactionsEXP 6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of NDUFA10 mRNA]CTDPMID:22206623
Ndufa10Mouse1,2-dimethylhydrazine increases expressionEXP 64804641 and 2-Dimethylhydrazine results in increased expression of NDUFA10 mRNACTDPMID:22206623
Ndufa10Mouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of NDUFA10 mRNACTDPMID:17942748
Ndufa10Mouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of NDUFA10 mRNACTDPMID:17942748
Ndufa10Mouse2,2,2-tetramine multiple interactionsISONdufa10 (Rattus norvegicus)6480464Trientine inhibits the reaction [Streptozocin results in increased expression of NDUFA10 protein]CTDPMID:21136691
Ndufa10Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of NDUFA10 mRNACTDPMID:17942748
Ndufa10Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of NDUFA10 mRNACTDPMID:21570461 and PMID:24680724
Ndufa10Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of NDUFA10 mRNACTDPMID:20399798
Ndufa10Mouse2,5-hexanedione decreases expressionISONdufa10 (Rattus norvegicus)64804642 and 5-hexanedione results in decreased expression of NDUFA10 proteinCTDPMID:19033394
Ndufa10Mouse2,5-hexanedione increases expressionISONdufa10 (Rattus norvegicus)64804642 and 5-hexanedione results in increased expression of NDUFA10 proteinCTDPMID:19033394
Ndufa10Mouse3-chloropropane-1,2-diol decreases expressionISONdufa10 (Rattus norvegicus)6480464alpha-Chlorohydrin results in decreased expression of NDUFA10 proteinCTDPMID:26072098
Ndufa10Mouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of NDUFA10 mRNACTDPMID:39298647
Ndufa10Mouse4,4'-sulfonyldiphenol affects expressionISONDUFA10 (Homo sapiens)6480464bisphenol S affects the expression of NDUFA10 proteinCTDPMID:31945527
Ndufa10Mouse4-hydroxyphenyl retinamide affects expressionISONDUFA10 (Homo sapiens)6480464Fenretinide affects the expression of NDUFA10 mRNACTDPMID:16570282
Ndufa10Mouse5-fluorouracil increases expressionISONDUFA10 (Homo sapiens)6480464Fluorouracil results in increased expression of NDUFA10 proteinCTDPMID:15585135 and PMID:16803524
Ndufa10Mouse5-fluorouracil affects response to substanceISONDUFA10 (Homo sapiens)6480464NDUFA10 protein affects the susceptibility to FluorouracilCTDPMID:15548681
Ndufa10Mouseafimoxifene decreases response to substanceISONDUFA10 (Homo sapiens)6480464NDUFA10 results in decreased susceptibility to afimoxifeneCTDPMID:21233418
Ndufa10Mouseaflatoxin B1 increases methylationISONDUFA10 (Homo sapiens)6480464Aflatoxin B1 results in increased methylation of NDUFA10 intronCTDPMID:30157460

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Biological Process

  

Cellular Component
1 to 12 of 12 rows

  
Object Symbol
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Reference
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Original Reference(s)
Ndufa10Mousecytoplasm is_active_inIBAPANTHER:PTN000053758 more ...2290270 GO_CentralGO_REF:0000033
Ndufa10Mousemitochondrial inner membrane is_active_inIDA 2290270 PMID:38575788UniProtPMID:38575788
Ndufa10Mousemitochondrial inner membrane located_inISOUniProtKB:O952992290270 GO_CentralGO_REF:0000119
Ndufa10Mousemitochondrial inner membrane located_inISOComplexPortal:CPX-5772290270 ComplexPortalGO_REF:0000114
Ndufa10Mousemitochondrial matrix located_inIEAUniProtKB-SubCell:SL-01702290270 UniProtGO_REF:0000044
Ndufa10Mousemitochondrion located_inISOUniProtKB:O952992290270 GO_CentralGO_REF:0000119
Ndufa10Mousemitochondrion located_inHDA 2290270 PMID:14651853 and PMID:18614015MGIPMID:14651853 and PMID:18614015
Ndufa10Mousemyelin sheath located_inHDA 2290270 PMID:17634366UniProtPMID:17634366
Ndufa10Mouserespiratory chain complex I part_ofIDA 2290270 PMID:38575788UniProtPMID:38575788
Ndufa10Mouserespiratory chain complex I part_ofISSUniProtKB:O952992290270 UniProtGO_REF:0000024
Ndufa10Mouserespiratory chain complex I part_ofISOUniProtKB:O952992290270 GO_CentralGO_REF:0000119
Ndufa10Mouserespiratory chain complex I part_ofIBAPANTHER:PTN000828201 more ...2290270 GO_CentralGO_REF:0000033
1 to 12 of 12 rows

Molecular Function

  
Object Symbol
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Term
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Evidence
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Reference
Notes
Source
Original Reference(s)
Ndufa10MouseNADH dehydrogenase (ubiquinone) activity enablesIDA 2290270 PMID:24652937MGIPMID:24652937

Imported Annotations - KEGG (archival)

Object Symbol
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Term
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Evidence
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Reference
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Original Reference(s)
Ndufa10MouseAlzheimer's disease pathway   IEA 6907045 KEGGmmu:05010
Ndufa10MouseHuntington's disease pathway   IEA 6907045 KEGGmmu:05016
Ndufa10Mouseoxidative phosphorylation pathway  IEA 6907045 KEGGmmu:00190
Ndufa10MouseParkinson's disease pathway   IEA 6907045 KEGGmmu:05012
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
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Source
Original Reference(s)
Ndufa10Mouseabnormal bone structure  IEA 5509061 MGI 
Ndufa10Mouseabnormal gait  IEA 5509061 MGI 
Ndufa10Mousedecreased bone mineral density  IEA 5509061 MGI 
Ndufa10Mouseincreased total body fat amount  IEA 5509061 MGI 
Ndufa10Mousepreweaning lethality, complete penetrance  IEA 5509061 MGI 

#
Reference Title
Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16916647   PMID:16998848   PMID:17634366   PMID:18614015   PMID:18614564   PMID:21267068   PMID:21556144   PMID:21873635   PMID:22794259   PMID:24652937   PMID:28130547   PMID:29199018  
PMID:29222160   PMID:30030361   PMID:30550785   PMID:30562941   PMID:32325033   PMID:36220812   PMID:36293380   PMID:36417873   PMID:36808153   PMID:38355793   PMID:38575788   PMID:38671439  



Ndufa10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39192,367,208 - 92,401,547 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl192,366,732 - 92,401,582 (-)EnsemblGRCm39 Ensembl
GRCm38192,439,486 - 92,473,825 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl192,439,010 - 92,473,860 (-)EnsemblGRCm38mm10GRCm38
MGSCv37194,336,285 - 94,370,335 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,270,114 - 94,304,164 (-)NCBIMGSCv36mm8
Celera195,379,073 - 95,413,122 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.4NCBI
NDUFA10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382239,892,442 - 240,025,342 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2239,892,450 - 240,025,743 (-)EnsemblGRCh38hg38GRCh38
GRCh372240,831,859 - 240,964,759 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362240,548,829 - 240,613,471 (-)NCBINCBI36Build 36hg18NCBI36
Build 342240,620,147 - 240,684,788NCBI
Celera2234,570,056 - 234,638,352 (-)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2232,654,836 - 232,722,773 (-)NCBIHuRef
CHM1_12240,902,845 - 240,970,868 (-)NCBICHM1_1
T2T-CHM13v2.02240,386,242 - 240,518,068 (-)NCBIT2T-CHM13v2.0
Ndufa10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89100,454,498 - 100,490,023 (-)NCBIGRCr8
mRatBN7.2993,007,034 - 93,041,825 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl993,007,042 - 93,042,560 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9101,441,793 - 101,476,601 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09106,577,557 - 106,612,365 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09104,934,713 - 104,969,479 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0999,617,051 - 99,651,827 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl999,617,052 - 99,651,813 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0999,282,165 - 99,316,943 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4991,655,135 - 91,689,653 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1991,859,903 - 91,894,383 (-)NCBI
Celera990,544,387 - 90,579,150 (-)NCBICelera
Cytogenetic Map9q36NCBI
Ndufa10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555421,329,212 - 1,370,695 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555421,329,802 - 1,370,109 (+)NCBIChiLan1.0ChiLan1.0
NDUFA10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213142,609,806 - 142,678,378 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B142,624,772 - 142,689,688 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B127,204,900 - 127,269,478 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B246,022,168 - 246,085,828 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B246,022,168 - 246,087,658 (-)Ensemblpanpan1.1panPan2
NDUFA10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12549,920,748 - 49,968,966 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2549,920,894 - 49,968,901 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2550,417,870 - 50,466,092 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02550,312,005 - 50,360,202 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2550,312,005 - 50,360,188 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12550,183,360 - 50,231,504 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02549,974,238 - 50,022,369 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02550,205,078 - 50,253,281 (-)NCBIUU_Cfam_GSD_1.0
Ndufa10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303191,747,635 - 191,783,140 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367451,436,234 - 1,471,843 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367451,436,257 - 1,471,785 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFA10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15138,986,421 - 139,031,897 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115138,999,174 - 139,031,892 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215153,792,416 - 153,825,373 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFA10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110126,018,383 - 126,082,847 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10126,015,852 - 126,083,082 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604073,324,402 - 73,390,721 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufa10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248474,370,570 - 4,412,393 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248474,371,264 - 4,412,334 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Ndufa10
1493 total Variants

Predicted Target Of
Summary Value
Count of predictions:492
Count of miRNA genes:329
Interacting mature miRNAs:372
Transcripts:ENSMUST00000027478, ENSMUST00000153897
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 39 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189786512123786512Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
1300821Lore1_mloss of righting induced by ethanol 1 (mouse)Not determined17554919192941077Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177123115110536075Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
14697706Stsl3a_mSalmonella typhimurium susceptibility locus 3a (mouse)17747663795827725Mouse

1 to 10 of 39 rows
Ndufa10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1DUniSTS
cM Map1 UniSTS
Ndufa10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1DUniSTS
cM Map1 UniSTS






1 to 17 of 17 rows
RefSeq Transcripts NM_024197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 17 of 17 rows

Ensembl Acc Id: ENSMUST00000027478   ⟹   ENSMUSP00000027478
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,366,732 - 92,401,582 (-)Ensembl
GRCm38.p6 Ensembl192,439,010 - 92,473,860 (-)Ensembl
Ensembl Acc Id: ENSMUST00000153897
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,367,564 - 92,388,439 (-)Ensembl
GRCm38.p6 Ensembl192,439,842 - 92,460,717 (-)Ensembl
Ensembl Acc Id: ENSMUST00000185251   ⟹   ENSMUSP00000140457
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,395,137 - 92,401,469 (-)Ensembl
GRCm38.p6 Ensembl192,467,415 - 92,473,747 (-)Ensembl
Ensembl Acc Id: ENSMUST00000185466
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,390,825 - 92,398,773 (-)Ensembl
GRCm38.p6 Ensembl192,463,103 - 92,471,051 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,379,775 - 92,390,711 (-)Ensembl
GRCm38.p6 Ensembl192,452,053 - 92,462,989 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,389,944 - 92,398,584 (-)Ensembl
GRCm38.p6 Ensembl192,462,222 - 92,470,862 (-)Ensembl
Ensembl Acc Id: ENSMUST00000189503   ⟹   ENSMUSP00000140576
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,367,001 - 92,401,479 (-)Ensembl
GRCm38.p6 Ensembl192,439,279 - 92,473,757 (-)Ensembl
Ensembl Acc Id: ENSMUST00000189582
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,400,501 - 92,401,489 (-)Ensembl
GRCm38.p6 Ensembl192,472,779 - 92,473,767 (-)Ensembl
RefSeq Acc Id: NM_024197   ⟹   NP_077159
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,367,430 - 92,401,480 (-)NCBI
GRCm38192,439,708 - 92,473,758 (-)ENTREZGENE
MGSCv37194,336,285 - 94,370,335 (-)RGD
Celera195,379,073 - 95,413,122 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030242321   ⟹   XP_030098181
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,367,208 - 92,401,547 (-)NCBI
GRCm38192,439,486 - 92,473,825 (-)NCBI
Sequence:
RefSeq Acc Id: NP_077159   ⟸   NM_024197
- Peptide Label: precursor
- UniProtKB: Q8BL57 (UniProtKB/Swiss-Prot),   Q3UKK0 (UniProtKB/Swiss-Prot),   Q9CW21 (UniProtKB/Swiss-Prot),   Q99LC3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030098181   ⟸   XM_030242321
- Peptide Label: isoform X1
Ensembl Acc Id: ENSMUSP00000027478   ⟸   ENSMUST00000027478
Ensembl Acc Id: ENSMUSP00000140457   ⟸   ENSMUST00000185251
Ensembl Acc Id: ENSMUSP00000140576   ⟸   ENSMUST00000189503
Deoxynucleoside kinase

Name Modeler Protein Id AA Range Protein Structure
AF-Q99LC3-F1-model_v2 AlphaFold Q99LC3 1-355 view protein structure

RGD ID:6874500
Promoter ID:EPDNEW_M701
Type:initiation region
Name:Ndufa10_1
Description:Mus musculus NADH dehydrogenase 1 alpha subcomplex 10 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38192,473,777 - 92,473,837EPDNEW
RGD ID:6818157
Promoter ID:MM_KWN:1642
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney
Transcripts:OTTMUST00000051652
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36194,357,336 - 94,357,836 (-)MPROMDB
RGD ID:6818160
Promoter ID:MM_KWN:1643
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000051651
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36194,369,996 - 94,370,652 (-)MPROMDB


1 to 27 of 27 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000026260 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000027478 ENTREZGENE
  ENSMUST00000027478.7 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot
InterPro Deoxyribonucleoside_kinase UniProtKB/Swiss-Prot
  DNK_dom UniProtKB/Swiss-Prot
  NDUFA10 UniProtKB/Swiss-Prot
  P-loop_NTPase UniProtKB/Swiss-Prot
KEGG Report mmu:67273 UniProtKB/Swiss-Prot
MGD MGI:1914523 ENTREZGENE
NCBI Gene 67273 ENTREZGENE
PANTHER DEOXYNUCLEOSIDE KINASE UniProtKB/Swiss-Prot
  NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 10, MITOCHONDRIAL UniProtKB/Swiss-Prot
Pfam dNK UniProtKB/Swiss-Prot
PhenoGen Ndufa10 PhenoGen
PIRSF NADH_UQ_42KD UniProtKB/Swiss-Prot
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot
UniProt A0A087WR38_MOUSE UniProtKB/TrEMBL
  A0A087WRD4_MOUSE UniProtKB/TrEMBL
  NDUAA_MOUSE UniProtKB/Swiss-Prot
  Q3UKK0 ENTREZGENE
  Q8BL57 ENTREZGENE
  Q99LC3 ENTREZGENE
  Q9CW21 ENTREZGENE
UniProt Secondary Q3UKK0 UniProtKB/Swiss-Prot
  Q8BL57 UniProtKB/Swiss-Prot
  Q9CW21 UniProtKB/Swiss-Prot
1 to 27 of 27 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-22 Ndufa10  NADH:ubiquinone oxidoreductase subunit A10    NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10  Symbol and/or name change 5135510 APPROVED