NDUFA10 (NADH:ubiquinone oxidoreductase subunit A10) - Rat Genome Database

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Gene: NDUFA10 (NADH:ubiquinone oxidoreductase subunit A10) Chlorocebus sabaeus
Analyze
Symbol: NDUFA10
Name: NADH:ubiquinone oxidoreductase subunit A10
RGD ID: 18615837
Description: ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (inferred); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); chromosome 2q37 deletion syndrome (ortholog); D-2-hydroxyglutaric aciduria 1 (ortholog); FOUND IN cytoplasm (inferred); mitochondrial inner membrane (inferred); mitochondrial matrix (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110126,018,383 - 126,082,847 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10126,015,852 - 126,083,082 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604073,324,402 - 73,390,721 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 13 of 13 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NDUFA10Green MonkeyBethlem Myopathy 1A  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Bethlem myopathy 1AClinVarPMID:26004199 and PMID:28492532
NDUFA10Green Monkeychromosome 2q37 deletion syndrome  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 2q37 deletion syndromeClinVarPMID:25741868
NDUFA10Green MonkeyD-2-hydroxyglutaric aciduria 1  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: D-2-hydroxyglutaric aciduria 1ClinVarPMID:16081310 more ...
NDUFA10Green Monkeygenetic disease  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
NDUFA10Green Monkeyhereditary spastic paraplegia 30  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary spastic paraplegia 30ClinVarPMID:16081310 more ...
NDUFA10Green Monkeyintellectual disability  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
NDUFA10Green MonkeyLeigh disease  ISONDUFA10 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
NDUFA10Green Monkeymitochondrial complex I deficiency  ISONDUFA10 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
NDUFA10Green Monkeynuclear type mitochondrial complex I deficiency 1  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Mitochondrial complex I deficiency and nuclear type 1ClinVarPMID:25741868 and PMID:28492532
NDUFA10Green Monkeynuclear type mitochondrial complex I deficiency 22  ISONDUFA10 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:21150889 more ...
NDUFA10Green Monkeyprimary hyperoxaluria type 1  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Primary hyperoxaluria and type IClinVarPMID:22821680
NDUFA10Green Monkeyschizophrenia  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVar 
NDUFA10Green MonkeySubacute Necrotizing Encephalopathy of Leigh, Infantile  ISONDUFA10 (Homo sapiens)8554872ClinVar Annotator: match by term: Leigh's necrotizing encephalopathyClinVarPMID:25741868 and PMID:28492532
1 to 13 of 13 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NDUFA10Green Monkeynuclear type mitochondrial complex I deficiency 22  ISONDUFA10 (Homo sapiens)7240710 OMIM 


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NDUFA10Green Monkeymitochondrial electron transport, NADH to ubiquinone involved_inIEAInterPro:IPR015828150520179 InterProGO_REF:0000002
NDUFA10Green Monkeymitochondrial electron transport, NADH to ubiquinone acts_upstream_of_or_withinIEAUniProtKB:Q99LC3 and ensembl:ENSMUSP00000027478150520179 EnsemblGO_REF:0000107
NDUFA10Green Monkeymitochondrial electron transport, NADH to ubiquinone involved_inIEAPANTHER:PTN008947057150520179 TreeGrafterGO_REF:0000118
NDUFA10Green Monkeyproton transmembrane transport involved_inIEAGO:0008137150520179 GOCGO_REF:0000108
NDUFA10Green Monkeyresponse to xenobiotic stimulus  ISONdufa10 (Rattus norvegicus)9068941 RGDPMID:17545021 and REF_RGD_ID:2302318

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NDUFA10Green Monkeycytoplasm located_inIEAPANTHER:PTN008947057150520179 TreeGrafterGO_REF:0000118
NDUFA10Green Monkeymitochondrial inner membrane located_inIEAUniProtKB:O95299 and ensembl:ENSP00000252711150520179 EnsemblGO_REF:0000107
NDUFA10Green Monkeymitochondrial inner membrane is_active_inIEAUniProtKB:Q99LC3 and ensembl:ENSMUSP00000027478150520179 EnsemblGO_REF:0000107
NDUFA10Green Monkeymitochondrial matrix located_inIEAUniRule:UR000329318150520179 UniProtGO_REF:0000104
NDUFA10Green Monkeymitochondrial matrix located_inIEAUniProtKB-SubCell:SL-0170150520179 UniProtGO_REF:0000044
NDUFA10Green Monkeymitochondrion located_inIEAUniProtKB-KW:KW-0496150520179 UniProtGO_REF:0000043
NDUFA10Green Monkeymitochondrion located_inIEAUniProtKB:O95299 and ensembl:ENSP00000252711150520179 EnsemblGO_REF:0000107
NDUFA10Green Monkeyrespiratory chain complex I part_ofIEAUniProtKB:O95299 more ...150520179 EnsemblGO_REF:0000107

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NDUFA10Green MonkeyNADH dehydrogenase (ubiquinone) activity enablesIEAUniProtKB:Q99LC3 and ensembl:ENSMUSP00000027478150520179 EnsemblGO_REF:0000107

PMID:22301074   PMID:30032202  



NDUFA10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110126,018,383 - 126,082,847 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10126,015,852 - 126,083,082 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604073,324,402 - 73,390,721 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
NDUFA10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382239,892,442 - 240,025,342 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2239,892,450 - 240,025,743 (-)EnsemblGRCh38hg38GRCh38
GRCh372240,831,859 - 240,964,759 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362240,548,829 - 240,613,471 (-)NCBINCBI36Build 36hg18NCBI36
Build 342240,620,147 - 240,684,788NCBI
Celera2234,570,056 - 234,638,352 (-)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2232,654,836 - 232,722,773 (-)NCBIHuRef
CHM1_12240,902,845 - 240,970,868 (-)NCBICHM1_1
T2T-CHM13v2.02240,386,242 - 240,518,068 (-)NCBIT2T-CHM13v2.0
Ndufa10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39192,367,208 - 92,401,547 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl192,366,732 - 92,401,582 (-)EnsemblGRCm39 Ensembl
GRCm38192,439,486 - 92,473,825 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl192,439,010 - 92,473,860 (-)EnsemblGRCm38mm10GRCm38
MGSCv37194,336,285 - 94,370,335 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,270,114 - 94,304,164 (-)NCBIMGSCv36mm8
Celera195,379,073 - 95,413,122 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.4NCBI
Ndufa10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89100,454,498 - 100,490,023 (-)NCBIGRCr8
mRatBN7.2993,007,034 - 93,041,825 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl993,007,042 - 93,042,560 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9101,441,793 - 101,476,601 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09106,577,557 - 106,612,365 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09104,934,713 - 104,969,479 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0999,617,051 - 99,651,827 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl999,617,052 - 99,651,813 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0999,282,165 - 99,316,943 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4991,655,135 - 91,689,653 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1991,859,903 - 91,894,383 (-)NCBI
Celera990,544,387 - 90,579,150 (-)NCBICelera
Cytogenetic Map9q36NCBI
Ndufa10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555421,329,212 - 1,370,695 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555421,329,802 - 1,370,109 (+)NCBIChiLan1.0ChiLan1.0
NDUFA10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213142,609,806 - 142,678,378 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B142,624,772 - 142,689,688 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B127,204,900 - 127,269,478 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B246,022,168 - 246,085,828 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B246,022,168 - 246,087,658 (-)Ensemblpanpan1.1panPan2
NDUFA10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12549,920,748 - 49,968,966 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2549,920,894 - 49,968,901 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2550,417,870 - 50,466,092 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02550,312,005 - 50,360,202 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2550,312,005 - 50,360,188 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12550,183,360 - 50,231,504 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02549,974,238 - 50,022,369 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02550,205,078 - 50,253,281 (-)NCBIUU_Cfam_GSD_1.0
Ndufa10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303191,747,635 - 191,783,140 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367451,436,234 - 1,471,843 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367451,436,257 - 1,471,785 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFA10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15138,986,421 - 139,031,897 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115138,999,174 - 139,031,892 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215153,792,416 - 153,825,373 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Ndufa10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248474,370,570 - 4,412,393 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248474,371,264 - 4,412,334 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in NDUFA10
1548 total Variants



ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20


RefSeq Transcripts XM_007966876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007966877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000004021   ⟹   ENSCSAP00000002283
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl10126,015,852 - 126,083,082 (-)Ensembl
RefSeq Acc Id: XM_007966876   ⟹   XP_007965067
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.110126,018,383 - 126,082,847 (-)NCBI
Vero_WHO_p1.0NW_02366604073,324,404 - 73,390,721 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007966877   ⟹   XP_007965068
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.110126,018,383 - 126,082,847 (-)NCBI
Vero_WHO_p1.0NW_02366604073,324,402 - 73,390,721 (+)NCBI
Sequence:
Protein RefSeqs XP_007965067 (Get FASTA)   NCBI Sequence Viewer  
  XP_007965068 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000002283
  ENSCSAP00000002283.1
RefSeq Acc Id: XP_007965068   ⟸   XM_007966877
- Peptide Label: isoform X2
RefSeq Acc Id: XP_007965067   ⟸   XM_007966876
- Peptide Label: isoform X1
- UniProtKB: A0A0D9R0Z4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000002283   ⟸   ENSCSAT00000004021



1 to 15 of 15 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCSAG00000005983 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000004021.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro Deoxyribonucleoside_kinase UniProtKB/TrEMBL
  DNK_dom UniProtKB/TrEMBL
  NDUFA10 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report csab:103218204 UniProtKB/TrEMBL
NCBI Gene NDUFA10 ENTREZGENE
PANTHER DEOXYNUCLEOSIDE KINASE UniProtKB/TrEMBL
  NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 10, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam dNK UniProtKB/TrEMBL
PIRSF NADH_UQ_42KD UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A0D9R0Z4 ENTREZGENE, UniProtKB/TrEMBL
1 to 15 of 15 rows