Ndufa10 (NADH:ubiquinone oxidoreductase subunit A10) - Rat Genome Database

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Gene: Ndufa10 (NADH:ubiquinone oxidoreductase subunit A10) Rattus norvegicus
Analyze
Symbol: Ndufa10 (Ensembl: Ndufa10l1)
Name: NADH:ubiquinone oxidoreductase subunit A10 (Ensembl:NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like 1)
RGD ID: 727968
Description: Predicted to enable NADH dehydrogenase (ubiquinone) activity. Involved in response to xenobiotic stimulus. Predicted to be located in mitochondrion. Predicted to be part of respiratory chain complex I. Predicted to be active in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 22. Orthologous to human NDUFA10 (NADH:ubiquinone oxidoreductase subunit A10); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 2,2,2-tetramine; 2,5-hexanedione; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CI-42kD; complex I-42kD; hypothetical protein LOC678759; LOC678759; MGC112575; MGC72603; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; NADH-ubiquinone oxidoreductase 42 kDa subunit; ndufa10l
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89100,454,498 - 100,490,023 (-)NCBIGRCr8
mRatBN7.2993,007,034 - 93,041,825 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl993,007,042 - 93,042,560 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9101,441,793 - 101,476,601 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09106,577,557 - 106,612,365 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09104,934,713 - 104,969,479 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0999,617,051 - 99,651,827 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl999,617,052 - 99,651,813 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0999,282,165 - 99,316,943 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4991,655,135 - 91,689,653 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1991,859,903 - 91,894,383 (-)NCBI
Celera990,544,387 - 90,579,150 (-)NCBICelera
Cytogenetic Map9q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. NCBI rat LocusLink and RefSeq merged data October 15, 2003 NCBI rat LocusLink and RefSeq merged data October 15, 2003
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. [Comparative proteomic analysis of the prefrontal cortex between normal and heroin-addicted rats] Qiu PM, etal., Nan Fang Yi Ke Da Xue Xue Bao. 2007 Apr;27(4):427-31.
9. GOA pipeline RGD automated data pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Comprehensive gene review and curation RGD comprehensive gene curation
13. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:9125149   PMID:12611891   PMID:14651853   PMID:15489334   PMID:15632090   PMID:17634366   PMID:18614015   PMID:24652937   PMID:26648553   PMID:27626371   PMID:28844695   PMID:29476059  


Genomics

Comparative Map Data
Ndufa10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89100,454,498 - 100,490,023 (-)NCBIGRCr8
mRatBN7.2993,007,034 - 93,041,825 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl993,007,042 - 93,042,560 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9101,441,793 - 101,476,601 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09106,577,557 - 106,612,365 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09104,934,713 - 104,969,479 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0999,617,051 - 99,651,827 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl999,617,052 - 99,651,813 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0999,282,165 - 99,316,943 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4991,655,135 - 91,689,653 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1991,859,903 - 91,894,383 (-)NCBI
Celera990,544,387 - 90,579,150 (-)NCBICelera
Cytogenetic Map9q36NCBI
NDUFA10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382239,892,442 - 240,025,342 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2239,892,450 - 240,025,743 (-)EnsemblGRCh38hg38GRCh38
GRCh372240,831,859 - 240,964,759 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362240,548,829 - 240,613,471 (-)NCBINCBI36Build 36hg18NCBI36
Build 342240,620,147 - 240,684,788NCBI
Celera2234,570,056 - 234,638,352 (-)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2232,654,836 - 232,722,773 (-)NCBIHuRef
CHM1_12240,902,845 - 240,970,868 (-)NCBICHM1_1
T2T-CHM13v2.02240,386,242 - 240,518,068 (-)NCBIT2T-CHM13v2.0
Ndufa10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39192,367,208 - 92,401,547 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl192,366,732 - 92,401,582 (-)EnsemblGRCm39 Ensembl
GRCm38192,439,486 - 92,473,825 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl192,439,010 - 92,473,860 (-)EnsemblGRCm38mm10GRCm38
MGSCv37194,336,285 - 94,370,335 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,270,114 - 94,304,164 (-)NCBIMGSCv36mm8
Celera195,379,073 - 95,413,122 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.4NCBI
Ndufa10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555421,329,212 - 1,370,695 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555421,329,802 - 1,370,109 (+)NCBIChiLan1.0ChiLan1.0
NDUFA10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213142,609,806 - 142,678,378 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B142,624,772 - 142,689,688 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B127,204,900 - 127,269,478 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B246,022,168 - 246,085,828 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B246,022,168 - 246,087,658 (-)Ensemblpanpan1.1panPan2
NDUFA10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12549,920,748 - 49,968,966 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2549,920,894 - 49,968,901 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2550,417,870 - 50,466,092 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02550,312,005 - 50,360,202 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2550,312,005 - 50,360,188 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12550,183,360 - 50,231,504 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02549,974,238 - 50,022,369 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02550,205,078 - 50,253,281 (-)NCBIUU_Cfam_GSD_1.0
Ndufa10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303191,747,635 - 191,783,140 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367451,436,234 - 1,471,843 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367451,436,257 - 1,471,785 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFA10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15138,986,421 - 139,031,897 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115138,999,174 - 139,031,892 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215153,792,416 - 153,825,373 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFA10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110126,018,383 - 126,082,847 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10126,015,852 - 126,083,082 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604073,324,402 - 73,390,721 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufa10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248474,370,570 - 4,412,393 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248474,371,264 - 4,412,334 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ndufa10
160 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:108
Count of miRNA genes:86
Interacting mature miRNAs:101
Transcripts:ENSRNOT00000022089
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)992491589100929786Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat

Markers in Region
AI548120  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2993,014,126 - 93,014,229 (+)MAPPERmRatBN7.2
Rnor_6.0999,624,139 - 99,624,241NCBIRnor6.0
Rnor_5.0999,289,253 - 99,289,355UniSTSRnor5.0
RGSC_v3.4991,661,974 - 91,662,076UniSTSRGSC3.4
Celera990,551,479 - 90,551,581UniSTS
RH 3.4 Map9798.0UniSTS
Cytogenetic Map9q36UniSTS
RH129838  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2659,879,390 - 59,879,571 (+)MAPPERmRatBN7.2
mRatBN7.2993,007,111 - 93,007,291 (+)MAPPERmRatBN7.2
Rnor_6.0662,796,523 - 62,796,703NCBIRnor6.0
Rnor_6.0999,617,129 - 99,617,308NCBIRnor6.0
Rnor_5.0672,382,087 - 72,382,267UniSTSRnor5.0
Rnor_5.0999,282,243 - 99,282,422UniSTSRnor5.0
RGSC_v3.4662,280,404 - 62,280,584UniSTSRGSC3.4
Celera990,544,465 - 90,544,644UniSTS
Celera658,896,098 - 58,896,278UniSTS
Cytogenetic Map9q36UniSTS
Cytogenetic Map6q21UniSTS
Ndufa10  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2659,880,174 - 59,881,074 (+)MAPPERmRatBN7.2
Rnor_6.0662,797,307 - 62,798,206NCBIRnor6.0
Rnor_5.0672,382,871 - 72,383,770UniSTSRnor5.0
RGSC_v3.4662,281,188 - 62,282,087UniSTSRGSC3.4
Celera658,896,882 - 58,897,781UniSTS
Cytogenetic Map9q36UniSTS
Cytogenetic Map6q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000022089   ⟹   ENSRNOP00000022089
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl993,007,042 - 93,041,815 (-)Ensembl
Rnor_6.0 Ensembl999,617,052 - 99,651,813 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097579   ⟹   ENSRNOP00000086149
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl993,017,073 - 93,041,763 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110509   ⟹   ENSRNOP00000095044
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl993,019,799 - 93,042,560 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112649   ⟹   ENSRNOP00000089002
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl993,016,355 - 93,042,560 (-)Ensembl
RefSeq Acc Id: NM_199495   ⟹   NP_955789
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89100,454,498 - 100,489,264 (-)NCBI
mRatBN7.2993,007,034 - 93,041,801 (-)NCBI
Rnor_6.0999,617,051 - 99,651,813 (-)NCBI
Rnor_5.0999,282,165 - 99,316,943 (-)NCBI
RGSC_v3.4991,655,135 - 91,689,653 (-)RGD
Celera990,544,387 - 90,579,150 (-)RGD
Sequence:
RefSeq Acc Id: XM_008767385   ⟹   XP_008765607
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89100,461,521 - 100,490,009 (-)NCBI
mRatBN7.2993,014,058 - 93,041,825 (-)NCBI
Rnor_6.0999,624,070 - 99,651,827 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039084195   ⟹   XP_038940123
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89100,454,505 - 100,489,019 (-)NCBI
mRatBN7.2993,007,034 - 93,041,555 (-)NCBI
RefSeq Acc Id: XM_063267706   ⟹   XP_063123776
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89100,454,505 - 100,490,015 (-)NCBI
RefSeq Acc Id: XM_063267707   ⟹   XP_063123777
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89100,454,505 - 100,490,023 (-)NCBI
RefSeq Acc Id: NP_955789   ⟸   NM_199495
- Peptide Label: precursor
- UniProtKB: Q80WE0 (UniProtKB/Swiss-Prot),   Q561S0 (UniProtKB/Swiss-Prot),   A0A8L2QBL2 (UniProtKB/TrEMBL),   A6JQU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008765607   ⟸   XM_008767385
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A6A5 (UniProtKB/TrEMBL),   A6JQU2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000022089   ⟸   ENSRNOT00000022089
RefSeq Acc Id: XP_038940123   ⟸   XM_039084195
- Peptide Label: isoform X3
- UniProtKB: A6JQU3 (UniProtKB/TrEMBL),   Q6P6W6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000095044   ⟸   ENSRNOT00000110509
Ensembl Acc Id: ENSRNOP00000089002   ⟸   ENSRNOT00000112649
Ensembl Acc Id: ENSRNOP00000086149   ⟸   ENSRNOT00000097579
RefSeq Acc Id: XP_063123777   ⟸   XM_063267707
- Peptide Label: isoform X1
- UniProtKB: Q80WE0 (UniProtKB/Swiss-Prot),   Q561S0 (UniProtKB/Swiss-Prot),   A0A8L2QBL2 (UniProtKB/TrEMBL),   A6JQU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063123776   ⟸   XM_063267706
- Peptide Label: isoform X1
- UniProtKB: Q80WE0 (UniProtKB/Swiss-Prot),   Q561S0 (UniProtKB/Swiss-Prot),   A0A8L2QBL2 (UniProtKB/TrEMBL),   A6JQU0 (UniProtKB/TrEMBL)
Protein Domains
Deoxynucleoside kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q561S0-F1-model_v2 AlphaFold Q561S0 1-355 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696866
Promoter ID:EPDNEW_R7390
Type:initiation region
Name:Ndufa10l1_1
Description:NADH dehydrogenase 1 alpha subcomplex 10-like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R5099  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0999,651,786 - 99,651,846EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:727968 AgrOrtholog
BioCyc Gene G2FUF-26691 BioCyc
BioCyc Pathway PWY-3781 [aerobic respiration I (cytochrome c)] BioCyc
BioCyc Pathway Image PWY-3781 BioCyc
Ensembl Genes ENSRNOG00000016470 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022089 ENTREZGENE
  ENSRNOT00000022089.7 UniProtKB/TrEMBL
  ENSRNOT00000097579.1 UniProtKB/TrEMBL
  ENSRNOT00000110509.1 UniProtKB/TrEMBL
  ENSRNOT00000112649.1 UniProtKB/TrEMBL
  ENSRNOT00000153949 ENTREZGENE
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:5599238 IMAGE-MGC_LOAD
  IMAGE:7389276 IMAGE-MGC_LOAD
InterPro Deoxyribonucleoside_kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNK_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NDUFA10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:316632 UniProtKB/Swiss-Prot
  rno:678759 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:112575 IMAGE-MGC_LOAD
  MGC:72603 IMAGE-MGC_LOAD
NCBI Gene Ndufa10 ENTREZGENE
PANTHER DEOXYNUCLEOSIDE KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 10, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam dNK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ndufa10 PhenoGen
PIRSF NADH_UQ_42KD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016470 RatGTEx
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I6A1N5_RAT UniProtKB/TrEMBL
  A0A8I6A6A5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ANX5_RAT UniProtKB/TrEMBL
  A0A8L2QBL2 ENTREZGENE, UniProtKB/TrEMBL
  A6JQU0 ENTREZGENE, UniProtKB/TrEMBL
  A6JQU2 ENTREZGENE, UniProtKB/TrEMBL
  A6JQU3 ENTREZGENE, UniProtKB/TrEMBL
  NDUAA_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q6P6W6 ENTREZGENE, UniProtKB/TrEMBL
  Q80WE0 ENTREZGENE
UniProt Secondary Q80WE0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-17 Ndufa10  NADH:ubiquinone oxidoreductase subunit A10  Ndufa10  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-10-01 Ndufa10  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10  Ndufa10l  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like  Symbol and Name updated 1299863 APPROVED
2008-05-12 Ndufa10l  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like  Ndufa10  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10  Symbol and Name updated 1299863 APPROVED
2008-03-18 Ndufa10  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10  LOC678759  hypothetical protein LOC678759  Data merged from RGD:1596925 737654 APPROVED
2008-03-18 Ndufa10  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10  Ndufa10l  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like  Symbol and Name updated 1299863 APPROVED
2008-03-13 Ndufa10l  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like  Ndufa10  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC678759  hypothetical protein LOC678759      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-07-08 Ndufa10  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10      Symbol and Name status set to approved 1299863 APPROVED