APOH (apolipoprotein H) - Rat Genome Database

Name: APOH
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: APOH (apolipoprotein H) Sus scrofa

Analyze

Symbol:

APOH

Name:

apolipoprotein H

RGD ID:

14027866

Description:

ENCODES a protein that exhibits lipid binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); negative regulation of respiratory burst (ortholog); positive regulation of triglyceride catabolic process (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH antiphospholipid syndrome (ortholog); arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); INTERACTS WITH ammonia

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

beta-2-glycoprotein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	APOH (apolipoprotein H)	HGNC	EggNOG, Ensembl, NCBI, OrthoDB, Treefam
Mus musculus (house mouse):	Apoh (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Apoh (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Apoh (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	APOH (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	APOH (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Apoh (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	APOH (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Apoh (apolipoprotein H)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	12,827,201 - 12,839,175 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	12,827,195 - 12,839,172 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	13,142,347 - 13,154,323 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

antiphospholipid syndrome (ISO)

arteriosclerosis (ISO)

Chemical and Drug Induced Liver Injury (ISO)

diabetes mellitus (ISO)

Diabetic Nephropathies (ISO)

diabetic retinopathy (ISO)

Fetal Growth Retardation (ISO)

Fetal Resorption (ISO)

Hyperlipoproteinemias (ISO)

macular retinal edema (ISO)

metabolic dysfunction-associated steatotic liver disease (ISO)

myocardial infarction (ISO)

peripheral vascular disease (ISO)

Pregnancy in Diabetics (ISO)

Stroke (ISO)

thrombosis (ISO)

type 1 diabetes mellitus (ISO)

type 2 diabetes mellitus (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

ammonia (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ regeneration (ISO)

blood coagulation, intrinsic pathway (IEA)

negative regulation of angiogenesis (IEA)

negative regulation of blood coagulation (IEA)

negative regulation of complement activation, classical pathway (IEA)

negative regulation of endothelial cell migration (IEA)

negative regulation of endothelial cell proliferation (IEA)

negative regulation of fibrinolysis (IEA)

negative regulation of myeloid cell apoptotic process (IEA)

negative regulation of respiratory burst (ISO)

negative regulation of smooth muscle cell apoptotic process (IEA)

plasminogen activation (IEA)

positive regulation of triglyceride catabolic process (ISO)

regulation of blood coagulation (IEA,ISO)

regulation of fibrinolysis (IEA)

response to triglyceride (ISO)

T cell mediated immunity (IEA)

triglyceride metabolic process (IEA)

triglyceride transport (ISO)

Cellular Component

cell surface (IEA,ISO)

chylomicron (IEA)

extracellular region (IEA)

extracellular space (IEA,ISO)

high-density lipoprotein particle (IEA)

plasma membrane (IEA)

very-low-density lipoprotein particle (IEA)

Molecular Function

heparin binding (IEA)

identical protein binding (IEA)

lipid binding (IEA,ISO)

lipoprotein lipase activator activity (IEA)

phospholipid binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

coagulation cascade pathway (ISO)

References

Genomics

Comparative Map Data

APOH
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	12,827,201 - 12,839,175 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	12,827,195 - 12,839,172 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	13,142,347 - 13,154,323 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

APOH
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	66,212,033 - 66,229,415 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	66,212,033 - 66,256,525 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	64,208,151 - 64,225,533 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	61,638,609 - 61,656,018 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	61,638,613 - 61,655,992	NCBI
Celera	17	60,780,183 - 60,797,591 (-)	NCBI		Celera
Cytogenetic Map	17	q24.2	NCBI
HuRef	17	59,599,926 - 59,617,004 (-)	NCBI		HuRef
CHM1_1	17	64,272,419 - 64,289,828 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	67,082,811 - 67,100,218 (-)	NCBI		T2T-CHM13v2.0

Apoh
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	108,286,123 - 108,305,222 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	108,234,180 - 108,305,222 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	108,395,297 - 108,414,396 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	108,343,354 - 108,414,396 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	108,256,611 - 108,275,710 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	108,211,403 - 108,230,481 (+)	NCBI		MGSCv36	mm8
Celera	11	120,134,821 - 120,148,689 (+)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	71.8	NCBI

Apoh
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	93,841,992 - 93,855,897 (+)	NCBI		GRCr8
mRatBN7.2	10	93,342,435 - 93,356,334 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	93,310,977 - 93,356,329 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	98,400,040 - 98,413,944 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	97,863,118 - 97,877,037 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	93,267,097 - 93,280,941 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	96,640,013 - 96,653,939 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	96,639,924 - 96,653,938 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	96,364,217 - 96,378,118 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	97,725,088 - 97,739,213 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	97,739,457 - 97,753,582 (+)	NCBI
Celera	10	92,007,324 - 92,020,973 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Apoh
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	5,610,164 - 5,626,020 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955478	5,612,258 - 5,626,061 (-)	NCBI	ChiLan1.0	ChiLan1.0

APOH
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	82,247,480 - 82,339,338 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	87,066,978 - 87,158,996 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	60,154,389 - 60,171,762 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	65,365,250 - 65,382,483 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	65,365,250 - 65,382,483 (-)	Ensembl	panpan1.1		panPan2

APOH
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	14,082,648 - 14,095,186 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	14,082,541 - 14,095,185 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	14,976,443 - 14,988,978 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	15,744,714 - 15,757,283 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	15,744,709 - 15,757,972 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	14,691,324 - 14,703,853 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	12,829,414 - 12,841,962 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	12,830,254 - 12,842,800 (-)	NCBI		UU_Cfam_GSD_1.0

Apoh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	12,499,435 - 12,511,134 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936541	6,683,534 - 6,695,066 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936541	6,683,483 - 6,695,094 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

APOH
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	55,209,142 - 55,231,176 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666077	26,257,256 - 26,290,880 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Apoh
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624870	2,081,968 - 2,099,517 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624870	2,082,050 - 2,096,220 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in APOH
469 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003131266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005668662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK232456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK232894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK346407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU466252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000018796 ⟹ ENSSSCP00000018294

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	12,827,202 - 12,839,170 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000033385 ⟹ ENSSSCP00000028834

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	12,827,201 - 12,839,175 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000074115 ⟹ ENSSSCP00000071021

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	12,827,201 - 12,839,175 (-)	Ensembl

RefSeq Acc Id:

XM_003131266 ⟹ XP_003131314

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	12,827,195 - 12,839,172 (-)	NCBI

Sequence:

show sequence

ACGTCTCTCTTTTTAGGAGAGGAAAGCCACTTTTGTCGTGCCCTTGAGAATTAGCCACAATGAT
TCCTCCGGTGCTCATCTTTTTCCTGAGTTTTCTCTGCCATGCTGCTATCGCAGGGCGAACCTGT
CCCAAGCCGGAAGAGTTACCGTTTGCTGTAGTTGTGCCGTTGAAATCATCCTATGCGCCAGGGG
AGGAGATAGTGTATACCTGCCAGCCGGGGTACGTGTCCCGGGGAGGGATCCGGCGGTTTATCTG
CCCGCTCACAGGACTTTGGCCCATCAACACTCTGAAATGTCTACCCAGAGTATGTCCTTTTGCT
GGAATCTTAGAAAACGGAGCTGTACGCTATACAACTTTTGAGTATCCCAACACGATCAGTTTCA
CTTGCAACCGGGGTTTTTCTCTGAAAGGAGCTAATTCGGCTAAATGTACCGAGGAAGGAAAATG
GAGTCCAGACCTTCCTGTCTGTACCCCTATAACCTGCCCTCCACCACCCACACCCAAGTTTGCA
AAACTTAGTGTTTATAAGCCATTGGCTGGGAACAACTCTCTCTATGGAGGCAAGGCAGTCTTTG
AATGCTTGCCACAGCACGCAATGTTTGGAAATGGTACAATTACTTGCACAGAACATGGAAATTG
GACTGAATTACCAGAATGTAAGGAAGTAAAATGCCCATTCCCATCAAGACCAGAAAACGGATTT
GTGAACTATCCTGCAAAGCAAGTTCTTTATTACCAGGATAAAGCCACATATGGTTGCCATGACA
CTTACACCTTGGATGGACCAGAAGAAGTTGAATGTAACAAATTTGGAAACTGGTCTGCACAGCC
CAGCTGTAAAGCATCTTGTAAATTATCTGTGAAAAGAGCTACTGTGATATATGAAGGAGAGAGA
GTCAATATCCAAGATAAATTTAAGAATGGAATGCTGCATGGCCAAAAAATTTCTTTCTTCTGCA
AGAATAAGGAAAAGAAGTGCAGCTATACGGAGGATGCCCAGTGCATAGACGGCACCATTGAAAT
CCCCAAATGCTTCAAGGAGCACAGTGCTTTGGCTTTCTGGAAAACGGATGCATCAGATGTAAAG
CCATGCTAAGCTGGCGTTAAGATTCAAAATTAAATATCACACTTGTATGTATTTGTCCAAGGAA
CCTAATGGAAGTGAAAAAATAAATCGACTGAATTTATTGCATCTGC

hide sequence

RefSeq Acc Id:

XM_005668662 ⟹ XP_005668719

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	12,827,195 - 12,839,172 (-)	NCBI

Sequence:

show sequence

ACGTCTCTCTTTTTAGGAGAGGAAAGCCACTTTTGTCGTGCCCTTGAGAATTAGCCACAATGAT
TCCTCCGGTGCTCATCTTTTTCCTGAGTTTTCTCTGCCATGCTGCTATCGCAGGGCGAACCTGT
CCCAAGCCGGAAGAGTTACCGTTTGCTGTAGTTGTGCCGTTGAAATCATCCTATGCGCCAGGGG
AGGAGATAGTGTATACCTGCCAGCCGGGGTACGTGTCCCGGGGAGGGATCCGGCGGTTTATCTG
CCCGCTCACAGGACTTTGGCCCATCAACACTCTGAAATGTCTACCTATAACCTGCCCTCCACCA
CCCACACCCAAGTTTGCAAAACTTAGTGTTTATAAGCCATTGGCTGGGAACAACTCTCTCTATG
GAGGCAAGGCAGTCTTTGAATGCTTGCCACAGCACGCAATGTTTGGAAATGGTACAATTACTTG
CACAGAACATGGAAATTGGACTGAATTACCAGAATGTAAGGAAGTAAAATGCCCATTCCCATCA
AGACCAGAAAACGGATTTGTGAACTATCCTGCAAAGCAAGTTCTTTATTACCAGGATAAAGCCA
CATATGGTTGCCATGACACTTACACCTTGGATGGACCAGAAGAAGTTGAATGTAACAAATTTGG
AAACTGGTCTGCACAGCCCAGCTGTAAAGCATCTTGTAAATTATCTGTGAAAAGAGCTACTGTG
ATATATGAAGGAGAGAGAGTCAATATCCAAGATAAATTTAAGAATGGAATGCTGCATGGCCAAA
AAATTTCTTTCTTCTGCAAGAATAAGGAAAAGAAGTGCAGCTATACGGAGGATGCCCAGTGCAT
AGACGGCACCATTGAAATCCCCAAATGCTTCAAGGAGCACAGTGCTTTGGCTTTCTGGAAAACG
GATGCATCAGATGTAAAGCCATGCTAAGCTGGCGTTAAGATTCAAAATTAAATATCACACTTGT
ATGTATTTGTCCAAGGAACCTAATGGAAGTGAAAAAATAAATCGACTGAATTTATTGCATCTGC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003131314	(Get FASTA)	NCBI Sequence Viewer
	XP_005668719	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000018294
	ENSSSCP00000018294.3
	ENSSSCP00000028834
	ENSSSCP00000028834.2
	ENSSSCP00000071021.1
	ENSSSCP00005012444.1
	ENSSSCP00005012461.1
	ENSSSCP00015015434.1
	ENSSSCP00015015454.1
	ENSSSCP00025034737.1
	ENSSSCP00025034808.1
	ENSSSCP00035040652.1
	ENSSSCP00035040659.1
	ENSSSCP00040007237.1
	ENSSSCP00040007248.1
	ENSSSCP00045045187.1
	ENSSSCP00045045211.1
	ENSSSCP00050002763.1
	ENSSSCP00050002765.1
	ENSSSCP00055045906.1
	ENSSSCP00055045933.1
	ENSSSCP00060025149.1
	ENSSSCP00060025150.1
	ENSSSCP00065005239.1
	ENSSSCP00065005242.1
	ENSSSCP00070005808.1
	ENSSSCP00070005816.1

RefSeq Acc Id:	XP_005668719 ⟸ XM_005668662
- Peptide Label:	isoform X2
- UniProtKB:	A0A140TAK8 (UniProtKB/TrEMBL), A0A4X1SU46 (UniProtKB/TrEMBL), A0A8D2BKE5 (UniProtKB/TrEMBL), A0A8D0IMU7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIPPVLIFFLSFLCHAAIAGRTCPKPEELPFAVVVPLKSSYAPGEEIVYTCQPGYVSRGGIRRF ICPLTGLWPINTLKCLPITCPPPPTPKFAKLSVYKPLAGNNSLYGGKAVFECLPQHAMFGNGTI TCTEHGNWTELPECKEVKCPFPSRPENGFVNYPAKQVLYYQDKATYGCHDTYTLDGPEEVECNK FGNWSAQPSCKASCKLSVKRATVIYEGERVNIQDKFKNGMLHGQKISFFCKNKEKKCSYTEDAQ CIDGTIEIPKCFKEHSALAFWKTDASDVKPC hide sequence

RefSeq Acc Id:	XP_003131314 ⟸ XM_003131266
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZFW3 (UniProtKB/TrEMBL), A0A4X1SSS9 (UniProtKB/TrEMBL), A0A8D1VIU0 (UniProtKB/TrEMBL), A0A8D1DIK0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIPPVLIFFLSFLCHAAIAGRTCPKPEELPFAVVVPLKSSYAPGEEIVYTCQPGYVSRGGIRRF ICPLTGLWPINTLKCLPRVCPFAGILENGAVRYTTFEYPNTISFTCNRGFSLKGANSAKCTEEG KWSPDLPVCTPITCPPPPTPKFAKLSVYKPLAGNNSLYGGKAVFECLPQHAMFGNGTITCTEHG NWTELPECKEVKCPFPSRPENGFVNYPAKQVLYYQDKATYGCHDTYTLDGPEEVECNKFGNWSA QPSCKASCKLSVKRATVIYEGERVNIQDKFKNGMLHGQKISFFCKNKEKKCSYTEDAQCIDGTI EIPKCFKEHSALAFWKTDASDVKPC hide sequence

RefSeq Acc Id:

ENSSSCP00000071021 ⟸ ENSSSCT00000074115

RefSeq Acc Id:

ENSSSCP00000018294 ⟸ ENSSSCT00000018796

RefSeq Acc Id:

ENSSSCP00000028834 ⟸ ENSSSCT00000033385

Protein Domains

Sushi

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000040910	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005013091	UniProtKB/TrEMBL
	ENSSSCG00015029268	UniProtKB/TrEMBL
	ENSSSCG00025058425	UniProtKB/TrEMBL
	ENSSSCG00035071393	UniProtKB/TrEMBL
	ENSSSCG00040013261	UniProtKB/TrEMBL
	ENSSSCG00045037124	UniProtKB/TrEMBL
	ENSSSCG00050004500	UniProtKB/TrEMBL
	ENSSSCG00055028916	UniProtKB/TrEMBL
	ENSSSCG00060043301	UniProtKB/TrEMBL
	ENSSSCG00065009655	UniProtKB/TrEMBL
	ENSSSCG00070003795	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000018796	ENTREZGENE
	ENSSSCT00000018796.5	UniProtKB/TrEMBL
	ENSSSCT00000033385	ENTREZGENE
	ENSSSCT00000033385.3	UniProtKB/TrEMBL
	ENSSSCT00000074115.1	UniProtKB/TrEMBL
	ENSSSCT00005020708.1	UniProtKB/TrEMBL
	ENSSSCT00005020743.1	UniProtKB/TrEMBL
	ENSSSCT00015038839.1	UniProtKB/TrEMBL
	ENSSSCT00015038878.1	UniProtKB/TrEMBL
	ENSSSCT00025079974.1	UniProtKB/TrEMBL
	ENSSSCT00025080110.1	UniProtKB/TrEMBL
	ENSSSCT00035096523.1	UniProtKB/TrEMBL
	ENSSSCT00035096535.1	UniProtKB/TrEMBL
	ENSSSCT00040017671.1	UniProtKB/TrEMBL
	ENSSSCT00040017699.1	UniProtKB/TrEMBL
	ENSSSCT00045064017.1	UniProtKB/TrEMBL
	ENSSSCT00045064046.1	UniProtKB/TrEMBL
	ENSSSCT00050006252.1	UniProtKB/TrEMBL
	ENSSSCT00050006260.1	UniProtKB/TrEMBL
	ENSSSCT00055057381.1	UniProtKB/TrEMBL
	ENSSSCT00055057411.1	UniProtKB/TrEMBL
	ENSSSCT00060058730.1	UniProtKB/TrEMBL
	ENSSSCT00060058734.1	UniProtKB/TrEMBL
	ENSSSCT00065012846.1	UniProtKB/TrEMBL
	ENSSSCT00065012852.1	UniProtKB/TrEMBL
	ENSSSCT00070007107.1	UniProtKB/TrEMBL
	ENSSSCT00070007117.1	UniProtKB/TrEMBL
Gene3D-CATH	Complement Module, domain 1	UniProtKB/TrEMBL
InterPro	Sushi/SCR/CCP_sf	UniProtKB/TrEMBL
	Sushi_2	UniProtKB/TrEMBL
	Sushi_SCR_CCP_dom	UniProtKB/TrEMBL
KEGG Report	ssc:100522100	UniProtKB/TrEMBL
NCBI Gene	APOH	ENTREZGENE
PANTHER	BETA-2-GLYCOPROTEIN 1	UniProtKB/TrEMBL
	C4B-BINDING PROTEIN BETA CHAIN	UniProtKB/TrEMBL
	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	UniProtKB/TrEMBL
	LOCOMOTION-RELATED PROTEIN HIKARU GENKI	UniProtKB/TrEMBL
Pfam	Sushi	UniProtKB/TrEMBL
	Sushi_2	UniProtKB/TrEMBL
PROSITE	SUSHI	UniProtKB/TrEMBL
SMART	CCP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57535	UniProtKB/TrEMBL
UniProt	A0A140TAK8	ENTREZGENE, UniProtKB/TrEMBL
	A0A286ZFW3	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SSS9	ENTREZGENE
	A0A4X1SU46	ENTREZGENE
	A0A5G2R1G7_PIG	UniProtKB/TrEMBL
	A0A8D0IMU7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1DIK0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1VIU0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D2BKE5	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A4X1SSS9	UniProtKB/TrEMBL
	A0A4X1SU46	UniProtKB/TrEMBL
VGNC ID	VGNC:85423	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

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Imported Disease Annotations - CTD

RGD Manual Annotations