CYP51A1 (cytochrome P450 family 51 subfamily A member 1) - Rat Genome Database

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Gene: CYP51A1 (cytochrome P450 family 51 subfamily A member 1) Homo sapiens
Analyze
Symbol: CYP51A1
Name: cytochrome P450 family 51 subfamily A member 1
RGD ID: 1345262
HGNC Page HGNC
Description: Enables heme binding activity and sterol 14-demethylase activity. Involved in steroid biosynthetic process. Located in endoplasmic reticulum.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CP51; CYP51; CYPL1; CYPLI; cytochrome P450 51A1; cytochrome P450, 51 (lanosterol 14-alpha-demethylase); cytochrome P450, family 51, subfamily A, polypeptide 1; cytochrome P450-14DM; cytochrome P45014DM; cytochrome P450LI; lanosterol 14-alpha demethylase; lanosterol 14-alpha-demethylase; LDM; P450-14DM; P450L1; sterol 14-alpha demethylase
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: CYP51A1P1   CYP51A1P2   CYP51A1P3  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38792,112,153 - 92,134,803 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl792,084,987 - 92,134,803 (-)EnsemblGRCh38hg38GRCh38
GRCh37791,741,467 - 91,764,117 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36791,579,402 - 91,601,946 (-)NCBINCBI36hg18NCBI36
Build 34791,386,116 - 91,408,661NCBI
Celera786,446,011 - 86,468,618 (-)NCBI
Cytogenetic Map7q21.2NCBI
HuRef786,348,902 - 86,371,499 (-)NCBIHuRef
CHM1_1791,671,533 - 91,694,128 (-)NCBICHM1_1
CRA_TCAGchr7v2791,070,701 - 91,093,297 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-alpha-phellandrene  (EXP)
(-)-epigallocatechin 3-gallate  (EXP)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-(3-(trifluoromethyl)phenyl)piperazine  (ISO)
1-benzylpiperazine  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
1H-pyrazole  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-butan-2-yl-4-[4-[4-[4-[[2-(2,4-dichlorophenyl)-2-(1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy]phenyl]-1-piperazinyl]phenyl]-1,2,4-triazol-3-one  (EXP)
2-hydroxypropanoic acid  (EXP)
22-Hydroxycholesterol  (EXP)
24,25-dihydrolanosterol  (EXP)
3',5'-cyclic AMP  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-(5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-5-yl)benzonitrile  (EXP)
4-[3-(4-tert-butylphenyl)-2-methylpropyl]-2,6-dimethylmorpholine  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-fluorouracil  (EXP)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (EXP,ISO)
acetamide  (ISO)
acetohydrazide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucosamine  (ISO)
all-trans-retinoic acid  (EXP)
alpha-hexachlorocyclohexane  (ISO)
alpha-phellandrene  (EXP)
ammonium chloride  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
benzalkonium chloride  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-D-glucosamine  (ISO)
beta-naphthoflavone  (EXP,ISO)
bezafibrate  (ISO)
bifonazole  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bitertanol  (EXP)
bromobenzene  (ISO)
Butylbenzyl phthalate  (ISO)
carbon nanotube  (EXP,ISO)
cerium trichloride  (ISO)
chloroprene  (ISO)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (EXP)
clobetasol  (ISO)
clotrimazole  (EXP)
cobalt dichloride  (EXP)
cocaine  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (EXP)
coumarin  (ISO)
coumestrol  (EXP)
Cuprizon  (ISO)
cyclosporin A  (EXP,ISO)
cyproconazole  (EXP,ISO)
dexamethasone  (EXP,ISO)
Di-n-hexyl phthalate  (ISO)
dibutyl phthalate  (ISO)
dichloromethane  (ISO)
diclofenac  (ISO)
Dicyclohexyl phthalate  (ISO)
difenoconazole  (ISO)
diisobutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
dioxygen  (ISO)
dipentyl phthalate  (ISO)
diuron  (ISO)
econazole  (EXP)
endosulfan  (ISO)
enilconazole  (EXP)
epoxiconazole  (EXP)
ergosterol  (EXP)
erlotinib hydrochloride  (EXP)
ethanol  (ISO)
ethyl methanesulfonate  (EXP)
fenarimol  (ISO)
fipronil  (EXP)
fluconazole  (EXP)
fluoranthene  (ISO)
flusilazole  (EXP,ISO)
flutamide  (ISO)
folic acid  (ISO)
formaldehyde  (EXP)
furan  (ISO)
gamma-hexachlorocyclohexane  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glycidol  (ISO)
hexaconazole  (EXP)
hydrazine  (ISO)
hydrogen peroxide  (EXP)
indometacin  (EXP)
isotretinoin  (EXP)
itraconazole  (EXP)
ivermectin  (EXP)
ketoconazole  (EXP,ISO)
lanosterol  (EXP,ISO)
lead nitrate  (ISO)
leflunomide  (EXP,ISO)
letrozole  (EXP)
levofloxacin  (ISO)
limonene  (ISO)
lithocholic acid  (ISO)
methapyrilene  (ISO)
methyl methanesulfonate  (EXP)
miconazole  (EXP,ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N(6)-butyryl-cAMP  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-nitrosodiethylamine  (ISO)
obeticholic acid  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
penconazole  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (ISO)
phenobarbital  (ISO)
phenylephrine  (ISO)
phenylpropanolamine  (EXP)
phosgene  (ISO)
phytosterols  (ISO)
picoxystrobin  (EXP)
pirinixic acid  (ISO)
potassium dichromate  (EXP)
pravastatin  (ISO)
prochloraz  (EXP)
progesterone  (EXP)
propiconazole  (EXP,ISO)
prothioconazole  (ISO)
pyrazinecarboxamide  (ISO)
quercetin  (EXP,ISO)
quercetin 3-O-beta-D-glucofuranoside  (EXP)
quercetin 3-O-beta-D-glucopyranoside  (EXP)
quinolin-8-ol  (EXP)
rac-lactic acid  (EXP)
Rebamipide  (ISO)
resveratrol  (EXP,ISO)
ritodrine  (ISO)
ritonavir  (ISO)
rotenone  (EXP,ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
simvastatin  (ISO)
sodium arsenite  (ISO)
sodium dodecyl sulfate  (ISO)
sodium fluoride  (ISO)
succimer  (ISO)
sunitinib  (EXP)
tamoxifen  (ISO)
tebuconazole  (EXP,ISO)
tebufenpyrad  (EXP)
temozolomide  (EXP)
testosterone  (EXP)
tetrachloromethane  (ISO)
tetracycline  (ISO)
thioacetamide  (ISO)
titanium dioxide  (ISO)
tolcapone  (ISO)
toluene  (ISO)
tremolite asbestos  (ISO)
triadimefon  (EXP,ISO)
trichloroethene  (ISO)
trimellitic anhydride  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (ISO)
vinclozolin  (ISO)
voriconazole  (EXP)
Yessotoxin  (EXP)
zaragozic acid A  (ISO)
zearalenone  (ISO)
zoledronic acid  (EXP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

Additional References at PubMed
PMID:8024575   PMID:8619637   PMID:8797093   PMID:8809088   PMID:8845856   PMID:8975714   PMID:11678326   PMID:12145339   PMID:12477932   PMID:12690205   PMID:12824470   PMID:12853948  
PMID:14702039   PMID:15128046   PMID:15489334   PMID:15611056   PMID:16344560   PMID:18660489   PMID:18676367   PMID:19322201   PMID:19946888   PMID:20149798   PMID:20547249   PMID:21653829  
PMID:21873635   PMID:21988832   PMID:22180046   PMID:24353279   PMID:24358204   PMID:24362992   PMID:24502137   PMID:24711211   PMID:25959826   PMID:26002733   PMID:26186194   PMID:26638075  
PMID:27313059   PMID:27432908   PMID:28380382   PMID:28443643   PMID:28514442   PMID:28830911   PMID:28846114   PMID:29180619   PMID:29615496   PMID:29807244   PMID:30194290   PMID:31056421  
PMID:31073040   PMID:31536960   PMID:31586073   PMID:31732153   PMID:31871319   PMID:31904814   PMID:31904842   PMID:32393512   PMID:32493730   PMID:32738194   PMID:33031537   PMID:33144569  
PMID:33545068   PMID:33957083   PMID:33961781   PMID:34079125   PMID:34432599   PMID:34709727   PMID:35032548   PMID:35124280   PMID:35271311  


Genomics

Comparative Map Data
CYP51A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38792,112,153 - 92,134,803 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl792,084,987 - 92,134,803 (-)EnsemblGRCh38hg38GRCh38
GRCh37791,741,467 - 91,764,117 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36791,579,402 - 91,601,946 (-)NCBINCBI36hg18NCBI36
Build 34791,386,116 - 91,408,661NCBI
Celera786,446,011 - 86,468,618 (-)NCBI
Cytogenetic Map7q21.2NCBI
HuRef786,348,902 - 86,371,499 (-)NCBIHuRef
CHM1_1791,671,533 - 91,694,128 (-)NCBICHM1_1
CRA_TCAGchr7v2791,070,701 - 91,093,297 (-)NCBI
Cyp51
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3954,130,674 - 4,154,697 (-)NCBIGRCm39mm39
GRCm39 Ensembl54,131,145 - 4,154,746 (-)Ensembl
GRCm3854,080,674 - 4,104,697 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl54,081,145 - 4,104,746 (-)EnsemblGRCm38mm10GRCm38
MGSCv3754,080,674 - 4,104,697 (-)NCBIGRCm37mm9NCBIm37
MGSCv3654,086,680 - 4,110,703 (-)NCBImm8
Celera54,010,747 - 4,034,762 (-)NCBICelera
Cytogenetic Map5A1NCBI
cM Map52.3NCBI
Cyp51
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2430,036,956 - 30,055,410 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl430,036,865 - 30,055,410 (+)Ensembl
Rnor_6.0427,175,564 - 27,194,018 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl427,175,243 - 27,194,018 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0427,078,790 - 27,097,244 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4426,752,677 - 26,771,131 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1426,758,233 - 26,776,686 (+)NCBI
Celera425,462,810 - 25,481,264 (+)NCBICelera
Cytogenetic Map4q13NCBI
LOC102027002
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554329,092,933 - 9,112,615 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554329,092,923 - 9,112,615 (-)NCBIChiLan1.0ChiLan1.0
CYP51A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1797,708,806 - 97,730,486 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl797,708,806 - 97,729,824 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0784,110,130 - 84,132,870 (-)NCBIMhudiblu_PPA_v0panPan3
CYP51A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11417,746,654 - 17,767,019 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1417,746,656 - 17,766,658 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1417,307,241 - 17,328,397 (-)NCBI
ROS_Cfam_1.01417,552,569 - 17,573,808 (-)NCBI
ROS_Cfam_1.0 Ensembl1417,550,375 - 17,573,565 (-)Ensembl
UMICH_Zoey_3.11417,710,915 - 17,732,068 (-)NCBI
UNSW_CanFamBas_1.01417,425,396 - 17,446,546 (-)NCBI
UU_Cfam_GSD_1.01417,699,282 - 17,720,469 (-)NCBI
LOC101955024
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511831,136,259 - 31,159,424 (-)NCBI
SpeTri2.0NW_0049366212,209,255 - 2,232,404 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CYP51A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl972,057,511 - 72,079,444 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1972,057,506 - 72,079,587 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2978,792,905 - 78,814,951 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CYP51A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12156,865,498 - 56,888,196 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2156,865,312 - 56,886,698 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604247,377,473 - 47,400,184 (-)NCBIVero_WHO_p1.0
LOC101724157
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248091,080,427 - 1,110,802 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
G49195  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37791,763,985 - 91,764,237UniSTSGRCh37
Build 36791,601,921 - 91,602,173RGDNCBI36
Celera786,468,544 - 86,468,796RGD
Cytogenetic Map7q21.2UniSTS
HuRef786,371,425 - 86,371,677UniSTS
CRA_TCAGchr7v2791,093,223 - 91,093,475UniSTS
CYP51A1_1811  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37791,741,425 - 91,742,249UniSTSGRCh37
Build 36791,579,361 - 91,580,185RGDNCBI36
Celera786,445,973 - 86,446,797RGD
HuRef786,348,864 - 86,349,688UniSTS
CRA_TCAGchr7v2791,070,663 - 91,071,487UniSTS
D11S3114  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map10q11.1UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q21.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map10q11.1-q24UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic MapXq13.1-q21.1UniSTS
Cytogenetic Map20pter-q12UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map1q41-q42.2UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map9p23UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map6p12UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic Map19qUniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map22q12.3-q13.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map19q11UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map1p32.2-p32.1UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map4q13.2UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map14q24.2UniSTS
SHGC-67307  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map18pter-p11.3UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map4q13.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q21.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map5q22.1UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p36.21UniSTS
TNG Radiation Hybrid Map41213.0UniSTS
D7S3207  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map2q31.2-q33.1UniSTS
RH68507  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7q21.2UniSTS
RH79131  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7q21.2UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:657
Count of miRNA genes:459
Interacting mature miRNAs:487
Transcripts:ENST00000003100, ENST00000422867, ENST00000435873, ENST00000450723, ENST00000482924
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 424 327 360 124 162 83 987 83 761 36 652 459 46 144 648
Low 1989 2284 1322 463 1530 346 3343 1950 2890 343 782 1140 124 1060 2116 5
Below cutoff 20 331 38 33 219 33 26 151 62 36 17 9 1 1 24

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000003100   ⟹   ENSP00000003100
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl792,112,153 - 92,134,477 (-)Ensembl
RefSeq Acc Id: ENST00000422867   ⟹   ENSP00000394268
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl792,113,585 - 92,123,844 (-)Ensembl
RefSeq Acc Id: ENST00000450723   ⟹   ENSP00000406757
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl792,113,412 - 92,134,803 (-)Ensembl
RefSeq Acc Id: ENST00000482924
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl792,113,694 - 92,117,448 (-)Ensembl
RefSeq Acc Id: ENST00000691309   ⟹   ENSP00000510368
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl792,084,987 - 92,134,503 (-)Ensembl
RefSeq Acc Id: NM_000786   ⟹   NP_000777
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38792,112,153 - 92,134,477 (-)NCBI
GRCh37791,741,463 - 91,764,059 (-)ENTREZGENE
Build 36791,579,402 - 91,601,946 (-)NCBI Archive
HuRef786,348,902 - 86,371,499 (-)ENTREZGENE
CHM1_1791,671,533 - 91,693,909 (-)NCBI
CRA_TCAGchr7v2791,070,701 - 91,093,297 (-)ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001146152   ⟹   NP_001139624
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38792,112,153 - 92,134,803 (-)NCBI
GRCh37791,741,463 - 91,764,059 (-)ENTREZGENE
HuRef786,348,902 - 86,371,499 (-)ENTREZGENE
CHM1_1791,671,533 - 91,694,128 (-)NCBI
CRA_TCAGchr7v2791,070,701 - 91,093,297 (-)ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001139624   ⟸   NM_001146152
- Peptide Label: isoform 2
- UniProtKB: Q16850 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_000777   ⟸   NM_000786
- Peptide Label: isoform 1 precursor
- UniProtKB: Q16850 (UniProtKB/Swiss-Prot),   A0A0C4DFL7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000003100   ⟸   ENST00000003100
RefSeq Acc Id: ENSP00000406757   ⟸   ENST00000450723
RefSeq Acc Id: ENSP00000394268   ⟸   ENST00000422867
RefSeq Acc Id: ENSP00000510368   ⟸   ENST00000691309

Protein Structures
Name Modeller Protein Id AA Range Protein Structure Video
AF-Q16850-F1-model_v2 AlphaFold Q16850 1-509 view protein structure  

Promoters
RGD ID:6805421
Promoter ID:HG_KWN:58546
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000003100,   OTTHUMT00000342054
Position:
Human AssemblyChrPosition (strand)Source
Build 36791,601,571 - 91,602,812 (-)MPROMDB
RGD ID:7211041
Promoter ID:EPDNEW_H11265
Type:initiation region
Name:CYP51A1_5
Description:cytochrome P450 family 51 subfamily A member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11266  EPDNEW_H11267  EPDNEW_H11268  EPDNEW_H11269  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38792,128,999 - 92,129,059EPDNEW
RGD ID:7211039
Promoter ID:EPDNEW_H11266
Type:initiation region
Name:CYP51A1_4
Description:cytochrome P450 family 51 subfamily A member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11265  EPDNEW_H11267  EPDNEW_H11268  EPDNEW_H11269  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38792,131,875 - 92,131,935EPDNEW
RGD ID:7211043
Promoter ID:EPDNEW_H11267
Type:initiation region
Name:CYP51A1_3
Description:cytochrome P450 family 51 subfamily A member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11266  EPDNEW_H11265  EPDNEW_H11268  EPDNEW_H11269  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38792,134,144 - 92,134,204EPDNEW
RGD ID:7211045
Promoter ID:EPDNEW_H11268
Type:initiation region
Name:CYP51A1_1
Description:cytochrome P450 family 51 subfamily A member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11266  EPDNEW_H11265  EPDNEW_H11267  EPDNEW_H11269  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38792,134,474 - 92,134,534EPDNEW
RGD ID:7211047
Promoter ID:EPDNEW_H11269
Type:initiation region
Name:CYP51A1_2
Description:cytochrome P450 family 51 subfamily A member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H11266  EPDNEW_H11265  EPDNEW_H11267  EPDNEW_H11268  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38792,134,803 - 92,134,863EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3
pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3
pathogenic
GRCh38/hg38 7q21.2(chr7:92074326-92160217)x3 copy number gain See cases [RCV000143414] Chr7:92074326..92160217 [GRCh38]
Chr7:91703640..91789531 [GRCh37]
Chr7:91541576..91627467 [NCBI36]
Chr7:7q21.2
uncertain significance
GRCh38/hg38 7q21.11-21.3(chr7:84002634-95228883)x1 copy number loss See cases [RCV000143271] Chr7:84002634..95228883 [GRCh38]
Chr7:83631950..94858195 [GRCh37]
Chr7:83469886..94696131 [NCBI36]
Chr7:7q21.11-21.3
pathogenic
TMEM106B-BRAF fusion deletion Pleomorphic xanthoastrocytoma [RCV000454357] Chr7:12258147..140494267 [GRCh37]
Chr7:7p21.3-q34
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43360-159119707)x1 copy number loss See cases [RCV000446044] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707) copy number gain See cases [RCV000510686] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)x3 copy number gain See cases [RCV000511549] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
NC_000007.13:g.(?_91570394)_(92085896_?)dup duplication Long QT syndrome [RCV000631877] Chr7:91941080..92456582 [GRCh38]
Chr7:91570394..92085896 [GRCh37]
Chr7:7q21.2
uncertain significance
Single allele deletion not provided [RCV000677988] Chr7:73591993..93683437 [GRCh37]
Chr7:7q11.23-21.3
uncertain significance
NC_000007.13:g.(20954043_21001537)_(114528369_114556605)inv inversion Childhood apraxia of speech [RCV000234948] Chr7:21001537..114528369 [GRCh37]
Chr7:7p15.3-q31.1
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:44935-159126310)x3 copy number gain not provided [RCV000746280] Chr7:44935..159126310 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10704-159122532)x3 copy number gain not provided [RCV000746278] Chr7:10704..159122532 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7q21.2(chr7:91579073-91742348)x3 copy number gain not provided [RCV000746890] Chr7:91579073..91742348 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.469-297T>A single nucleotide variant not provided [RCV001584778] Chr7:92127928 [GRCh38]
Chr7:91757242 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.771-189A>G single nucleotide variant not provided [RCV001566675] Chr7:92124042 [GRCh38]
Chr7:91753356 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.1529G>T (p.Ter510Leu) single nucleotide variant not provided [RCV000762457] Chr7:92113666 [GRCh38]
Chr7:91742980 [GRCh37]
Chr7:7q21.2
uncertain significance
GRCh37/hg19 7p22.3-q36.3(chr7:10365-159119707)x3 copy number gain not provided [RCV000848126] Chr7:10365..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
NM_000786.4(CYP51A1):c.1359T>C (p.His453=) single nucleotide variant not provided [RCV000836667] Chr7:92113836 [GRCh38]
Chr7:91743150 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.1352-246A>G single nucleotide variant not provided [RCV001568740] Chr7:92114089 [GRCh38]
Chr7:91743403 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.*280T>C single nucleotide variant not provided [RCV001555564] Chr7:92113385 [GRCh38]
Chr7:91742699 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.292-52G>T single nucleotide variant not provided [RCV001685103] Chr7:92129108 [GRCh38]
Chr7:91758422 [GRCh37]
Chr7:7q21.2
benign
NR_122109.1(CYP51A1-AS1):n.252C>A single nucleotide variant not provided [RCV001693157] Chr7:92134814 [GRCh38]
Chr7:91764128 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.291+35A>C single nucleotide variant not provided [RCV001562815] Chr7:92131739 [GRCh38]
Chr7:91761053 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.291+206C>T single nucleotide variant not provided [RCV001643803] Chr7:92131568 [GRCh38]
Chr7:91760882 [GRCh37]
Chr7:7q21.2
benign
NM_001146152.2(CYP51A1):c.-198G>A single nucleotide variant not provided [RCV001557299] Chr7:92134740 [GRCh38]
Chr7:91764054 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.770+114G>A single nucleotide variant not provided [RCV001558037] Chr7:92126139 [GRCh38]
Chr7:91755453 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.468+83T>C single nucleotide variant not provided [RCV001649298] Chr7:92128797 [GRCh38]
Chr7:91758111 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.1183-201A>G single nucleotide variant not provided [RCV001686304] Chr7:92117413 [GRCh38]
Chr7:91746727 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.291+124G>A single nucleotide variant not provided [RCV001670177] Chr7:92131650 [GRCh38]
Chr7:91760964 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.291+25_291+26dup duplication not provided [RCV001645810] Chr7:92131736..92131737 [GRCh38]
Chr7:91761050..91761051 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.292-15C>T single nucleotide variant not provided [RCV001616900] Chr7:92129071 [GRCh38]
Chr7:91758385 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.891-61G>T single nucleotide variant not provided [RCV001611032] Chr7:92123376 [GRCh38]
Chr7:91752690 [GRCh37]
Chr7:7q21.2
benign
NM_001146152.2(CYP51A1):c.-246G>A single nucleotide variant not provided [RCV001652474] Chr7:92134788 [GRCh38]
Chr7:91764102 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.*251G>C single nucleotide variant not provided [RCV001695994] Chr7:92113414 [GRCh38]
Chr7:91742728 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.193-47T>C single nucleotide variant not provided [RCV001614638] Chr7:92131919 [GRCh38]
Chr7:91761233 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.1182+175A>G single nucleotide variant not provided [RCV001710158] Chr7:92118345 [GRCh38]
Chr7:91747659 [GRCh37]
Chr7:7q21.2
benign
NC_000007.13:g.(?_91570394)_(92085896_?)dup duplication Long QT syndrome [RCV001295951] Chr7:91570394..92085896 [GRCh37]
Chr7:7q21.2
uncertain significance
NM_000786.4(CYP51A1):c.291+25_291+27dup duplication not provided [RCV001581307] Chr7:92131736..92131737 [GRCh38]
Chr7:91761050..91761051 [GRCh37]
Chr7:7q21.2
likely benign
GRCh37/hg19 7q21.12-22.1(chr7:87477185-100333327) copy number gain Isolated Pierre-Robin syndrome [RCV001352649] Chr7:87477185..100333327 [GRCh37]
Chr7:7q21.12-22.1
pathogenic
NM_000786.4(CYP51A1):c.595+66A>G single nucleotide variant not provided [RCV001612527] Chr7:92127439 [GRCh38]
Chr7:91756753 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.193-120del deletion not provided [RCV001617233] Chr7:92131992 [GRCh38]
Chr7:91761306 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.291+25dup duplication not provided [RCV001682508] Chr7:92131736..92131737 [GRCh38]
Chr7:91761050..91761051 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.280G>A (p.Ala94Thr) single nucleotide variant Developmental cataract [RCV001775023] Chr7:92131785 [GRCh38]
Chr7:91761099 [GRCh37]
Chr7:7q21.2
uncertain significance
NC_000007.13:g.(91715729_91718698)_(91864237_91972337)del deletion Cerebral cavernous malformation [RCV001728075] Chr7:91718698..91864237 [GRCh37]
Chr7:7q21.2
pathogenic
GRCh37/hg19 7q21.11-21.3(chr7:77821356-93340137) copy number gain not specified [RCV002053701] Chr7:77821356..93340137 [GRCh37]
Chr7:7q21.11-21.3
pathogenic
NM_000786.4(CYP51A1):c.829C>T (p.Arg277Cys) single nucleotide variant not provided [RCV001962265] Chr7:92123795 [GRCh38]
Chr7:91753109 [GRCh37]
Chr7:7q21.2
uncertain significance
NM_000786.4(CYP51A1):c.196A>G (p.Ser66Gly) single nucleotide variant not provided [RCV002036701] Chr7:92131869 [GRCh38]
Chr7:91761183 [GRCh37]
Chr7:7q21.2
uncertain significance
NM_000786.4(CYP51A1):c.1156del (p.Ile385_Met386insTer) deletion not provided [RCV001932165] Chr7:92118546 [GRCh38]
Chr7:91747860 [GRCh37]
Chr7:7q21.2
uncertain significance
NM_000786.4(CYP51A1):c.596-17C>G single nucleotide variant not provided [RCV002135141] Chr7:92126444 [GRCh38]
Chr7:91755758 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.1309C>T (p.Pro437Ser) single nucleotide variant not provided [RCV002094918] Chr7:92117086 [GRCh38]
Chr7:91746400 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.93C>T (p.Asn31=) single nucleotide variant not provided [RCV002079950] Chr7:92134272 [GRCh38]
Chr7:91763586 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.1291C>T (p.Arg431Cys) single nucleotide variant not provided [RCV002221776]   uncertain significance
NM_000786.4(CYP51A1):c.1491T>A (p.Pro497=) single nucleotide variant not provided [RCV002099951] Chr7:92113704 [GRCh38]
Chr7:91743018 [GRCh37]
Chr7:7q21.2
benign
NM_000786.4(CYP51A1):c.262A>G (p.Ile88Val) single nucleotide variant not provided [RCV002121569] Chr7:92131803 [GRCh38]
Chr7:91761117 [GRCh37]
Chr7:7q21.2
likely benign
NM_000786.4(CYP51A1):c.1147A>G (p.Ile383Val) single nucleotide variant not provided [RCV002120241] Chr7:92118555 [GRCh38]
Chr7:91747869 [GRCh37]
Chr7:7q21.2
benign

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:2649 AgrOrtholog
COSMIC CYP51A1 COSMIC
Ensembl Genes ENSG00000001630 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000003100 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000394268 UniProtKB/TrEMBL
  ENSP00000406757 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000003100 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000422867 UniProtKB/TrEMBL
  ENST00000450723 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.630.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000001630 GTEx
HGNC ID HGNC:2649 ENTREZGENE
Human Proteome Map CYP51A1 Human Proteome Map
InterPro Cyt_P450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_P450_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_P450_E_grp-IV UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_P450_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:1595 UniProtKB/Swiss-Prot
NCBI Gene 1595 ENTREZGENE
OMIM 601637 OMIM
Pfam p450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA27123 PharmGKB
PRINTS EP450IV UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE CYTOCHROME_P450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48264 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0C4DFL7 ENTREZGENE
  CP51A_HUMAN UniProtKB/Swiss-Prot
  H7C0D0_HUMAN UniProtKB/TrEMBL
  Q05D40_HUMAN UniProtKB/TrEMBL
  Q16850 ENTREZGENE
UniProt Secondary A0A0C4DFL7 UniProtKB/Swiss-Prot
  A4D1F8 UniProtKB/Swiss-Prot
  B2RAI4 UniProtKB/Swiss-Prot
  B4DJ55 UniProtKB/Swiss-Prot
  O00770 UniProtKB/Swiss-Prot
  O00772 UniProtKB/Swiss-Prot
  Q16784 UniProtKB/Swiss-Prot
  Q8N1A8 UniProtKB/Swiss-Prot
  Q99868 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-15 CYP51A1  cytochrome P450 family 51 subfamily A member 1    cytochrome P450, family 51, subfamily A, polypeptide 1  Symbol and/or name change 5135510 APPROVED
2011-08-17 CYP51A1  cytochrome P450, family 51, subfamily A, polypeptide 1  CYP51A1  cytochrome P450, family 51, subfamily A, polypeptide 1  Symbol and/or name change 5135510 APPROVED