Upp1 (uridine phosphorylase 1) - Rat Genome Database
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Gene: Upp1 (uridine phosphorylase 1) Mus musculus
Analyze
Symbol: Upp1
Name: uridine phosphorylase 1
RGD ID: 1313670
MGI Page MGI
Description: Exhibits uridine phosphorylase activity. Involved in pyrimidine nucleotide metabolic process and uridine catabolic process. Predicted to localize to nucleoplasm. Is expressed in early embryo; nervous system; and sensory organ. Orthologous to human UPP1 (uridine phosphorylase 1); PARTICIPATES IN pyrimidine metabolic pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-diaminotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI325217; U; UdR; UdRPase; Up; UPase; UPase 1; Upp; urdPase 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39119,068,008 - 9,086,170 (+)NCBIGRCm39mm39
GRCm38119,118,008 - 9,136,170 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl119,118,103 - 9,136,170 (+)EnsemblGRCm38mm10GRCm38
MGSCv37119,018,011 - 9,036,173 (+)NCBIGRCm37mm9NCBIm37
MGSCv36119,018,106 - 9,036,167 (+)NCBImm8
Celera119,551,715 - 9,569,878 (+)NCBICelera
Cytogenetic Map11A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (EXP)
2,4-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-benzyl-1-(2-hydroxyethoxymethyl)uracil  (EXP)
5-fluorouracil  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
adenosine  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bicalutamide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (EXP)
bleomycin A5  (ISO)
bortezomib  (EXP)
butanal  (ISO)
cadmium atom  (ISO)
calciol  (EXP)
calyculin a  (EXP)
carbamazepine  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
chloropicrin  (ISO)
chloroprene  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
crotonaldehyde  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
cytidine  (EXP)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dioxygen  (ISO)
diquat  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxifluridine  (EXP)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (ISO)
formaldehyde  (ISO)
guanosine  (EXP)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
indometacin  (ISO)
manganese(II) chloride  (ISO)
menadione  (EXP,ISO)
mercury dichloride  (ISO)
methamphetamine  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
Monobutylphthalate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N-nitrosourea  (EXP,ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nicotine  (ISO)
obeticholic acid  (ISO)
oxaliplatin  (ISO)
paracetamol  (ISO)
pentobarbital  (EXP)
perfluorononanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (EXP)
progesterone  (ISO)
pyrimidine  (EXP)
rac-lactic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
SCH 23390  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenate  (ISO)
succimer  (EXP)
sulforaphane  (ISO)
sulindac sulfide  (ISO)
tert-butyl hydroperoxide  (ISO)
thalidomide  (EXP)
thimerosal  (ISO)
topotecan  (ISO)
tributylstannane  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (ISO)
Triptolide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
trovafloxacin  (EXP)
tunicamycin  (ISO)
urethane  (ISO)
uridine  (EXP)
valproic acid  (EXP,ISO)
zoledronic acid  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:7671812   PMID:7744869   PMID:9140067   PMID:10349636   PMID:10519414   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11743878   PMID:11956089   PMID:12077348  
PMID:12466851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14154460   PMID:14610273   PMID:14681479   PMID:14715930   PMID:15489334   PMID:15772079   PMID:16141072   PMID:16141073  
PMID:17967808   PMID:18799693   PMID:19028666   PMID:19714313   PMID:20884872   PMID:21267068   PMID:21677750   PMID:21731673   PMID:21954436   PMID:23355744   PMID:24362886   PMID:24475249  
PMID:24887406   PMID:24918436   PMID:26801745   PMID:28514652   PMID:31315026   PMID:31341279  


Genomics

Comparative Map Data
Upp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39119,068,008 - 9,086,170 (+)NCBIGRCm39mm39
GRCm38119,118,008 - 9,136,170 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl119,118,103 - 9,136,170 (+)EnsemblGRCm38mm10GRCm38
MGSCv37119,018,011 - 9,036,173 (+)NCBIGRCm37mm9NCBIm37
MGSCv36119,018,106 - 9,036,167 (+)NCBImm8
Celera119,551,715 - 9,569,878 (+)NCBICelera
Cytogenetic Map11A1NCBI
UPP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl748,088,628 - 48,108,736 (+)EnsemblGRCh38hg38GRCh38
GRCh38748,088,308 - 48,108,736 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37748,128,301 - 48,148,333 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37748,128,355 - 48,148,330 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36748,094,880 - 48,114,855 (+)NCBINCBI36hg18NCBI36
Celera748,227,538 - 48,247,515 (+)NCBI
Cytogenetic Map7p12.3NCBI
HuRef748,013,948 - 48,033,924 (+)NCBIHuRef
CHM1_1748,131,900 - 48,152,030 (+)NCBICHM1_1
CRA_TCAGchr7v2748,168,224 - 48,188,201 (+)NCBI
Upp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21483,809,495 - 83,829,299 (+)NCBI
Rnor_6.0 Ensembl1489,314,176 - 89,334,276 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01489,314,234 - 89,334,060 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01489,112,302 - 89,132,102 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41489,651,264 - 89,669,630 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11489,669,068 - 89,688,775 (+)NCBI
Celera1482,846,265 - 82,864,631 (+)NCBICelera
Cytogenetic Map14q21NCBI
Upp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554565,365,877 - 5,385,336 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554565,365,912 - 5,385,336 (-)NCBIChiLan1.0ChiLan1.0
UPP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1748,838,901 - 48,858,189 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl748,838,893 - 48,858,185 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0748,729,975 - 48,749,598 (+)NCBIMhudiblu_PPA_v0panPan3
UPP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.118108,215 - 120,213 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Upp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647822,508,602 - 22,531,604 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UPP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1848,418,385 - 48,440,736 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11848,418,385 - 48,440,414 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
UPP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12110,686,600 - 10,707,181 (-)NCBI
ChlSab1.1 Ensembl2110,686,093 - 10,706,347 (-)Ensembl
Upp1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247405,517,387 - 5,531,594 (-)NCBI

Position Markers
RH131849  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38119,135,967 - 9,136,154UniSTSGRCm38
MGSCv37119,035,970 - 9,036,157UniSTSGRCm37
Celera119,569,675 - 9,569,862UniSTS
Cytogenetic Map11A1-2UniSTS
AI325217  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38119,136,033 - 9,136,152UniSTSGRCm38
MGSCv37119,036,036 - 9,036,155UniSTSGRCm37
Celera119,569,741 - 9,569,860UniSTS
Cytogenetic Map11A1-2UniSTS
Whitehead/MRC_RH1142.97UniSTS
PMC139774P2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38119,130,412 - 9,130,649UniSTSGRCm38
MGSCv37119,030,415 - 9,030,652UniSTSGRCm37
Celera119,564,119 - 9,564,356UniSTS
Cytogenetic Map11A1-2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123930487Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11126026374Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11126026374Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11126026374Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1127705234277232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11272035536721472Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11330000018200000Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11330000018500000Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11330000019800000Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11330000034600000Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11330000044200000Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11330000060800000Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11330000063000000Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1301634Eae6a_msusceptibility to experimental allergic encephalomyelitis 6a (mouse)Not determined11455789621429532Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11455789621429532Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11470000046400000Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11530000035200000Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11693027733966219Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
27226794Feml9_mfemur length 9, 5 week (mouse)11710000016800000Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11842212142422260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11890000061500000Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11895609742956218Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11906178043061942Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1377
Count of miRNA genes:492
Interacting mature miRNAs:575
Transcripts:ENSMUST00000020677, ENSMUST00000101525, ENSMUST00000130522, ENSMUST00000146696, ENSMUST00000164791, ENSMUST00000166455, ENSMUST00000168121, ENSMUST00000170444, ENSMUST00000172452
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000020677   ⟹   ENSMUSP00000020677
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,118,103 - 9,136,164 (+)Ensembl
RefSeq Acc Id: ENSMUST00000101525   ⟹   ENSMUSP00000099063
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,118,107 - 9,136,170 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130522   ⟹   ENSMUSP00000123285
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,118,548 - 9,133,322 (+)Ensembl
RefSeq Acc Id: ENSMUST00000146696
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,133,015 - 9,136,082 (+)Ensembl
RefSeq Acc Id: ENSMUST00000164791   ⟹   ENSMUSP00000127473
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,118,507 - 9,136,167 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166455   ⟹   ENSMUSP00000129276
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,125,683 - 9,134,749 (+)Ensembl
RefSeq Acc Id: ENSMUST00000168121
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,118,627 - 9,119,673 (+)Ensembl
RefSeq Acc Id: ENSMUST00000170444   ⟹   ENSMUSP00000125934
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,118,245 - 9,134,729 (+)Ensembl
RefSeq Acc Id: ENSMUST00000172452   ⟹   ENSMUSP00000129787
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl119,118,787 - 9,133,251 (+)Ensembl
RefSeq Acc Id: NM_001159401   ⟹   NP_001152873
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39119,068,008 - 9,086,170 (+)NCBI
GRCm38119,118,008 - 9,136,170 (+)ENTREZGENE
MGSCv37119,018,011 - 9,036,173 (+)RGD
Celera119,551,715 - 9,569,878 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001159402   ⟹   NP_001152874
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39119,068,507 - 9,086,170 (+)NCBI
GRCm38119,118,507 - 9,136,170 (+)NCBI
MGSCv37119,018,011 - 9,036,173 (+)RGD
Celera119,551,715 - 9,569,878 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009477   ⟹   NP_033503
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39119,068,103 - 9,086,170 (+)NCBI
GRCm38119,118,103 - 9,136,170 (+)NCBI
MGSCv37119,018,011 - 9,036,173 (+)RGD
Celera119,551,715 - 9,569,878 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514667   ⟹   XP_006514730
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39119,068,649 - 9,086,162 (+)NCBI
GRCm38119,118,649 - 9,136,162 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033503   ⟸   NM_009477
- UniProtKB: P52624 (UniProtKB/Swiss-Prot),   Q5SUC8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001152873   ⟸   NM_001159401
- UniProtKB: P52624 (UniProtKB/Swiss-Prot),   Q5SUC8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001152874   ⟸   NM_001159402
- UniProtKB: P52624 (UniProtKB/Swiss-Prot),   Q5SUC8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514730   ⟸   XM_006514667
- Peptide Label: isoform X1
- UniProtKB: P52624 (UniProtKB/Swiss-Prot),   Q5SUC8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000127473   ⟸   ENSMUST00000164791
RefSeq Acc Id: ENSMUSP00000125934   ⟸   ENSMUST00000170444
RefSeq Acc Id: ENSMUSP00000123285   ⟸   ENSMUST00000130522
RefSeq Acc Id: ENSMUSP00000129787   ⟸   ENSMUST00000172452
RefSeq Acc Id: ENSMUSP00000129276   ⟸   ENSMUST00000166455
RefSeq Acc Id: ENSMUSP00000020677   ⟸   ENSMUST00000020677
RefSeq Acc Id: ENSMUSP00000099063   ⟸   ENSMUST00000101525
Protein Domains
PNP_UDP_1

Promoters
RGD ID:6822424
Promoter ID:MM_KWN:6423
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   ES_Cell
Transcripts:ENSMUST00000101525,   NM_001159402,   NM_009477,   OTTMUST00000011514
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36119,017,636 - 9,018,657 (+)MPROMDB
RGD ID:6822425
Promoter ID:MM_KWN:6424
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000011515
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36119,032,461 - 9,033,317 (+)MPROMDB
RGD ID:8673950
Promoter ID:EPDNEW_M15006
Type:multiple initiation site
Name:Upp1_2
Description:Mus musculus uridine phosphorylase 1 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15007  EPDNEW_M15008  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38119,118,006 - 9,118,066EPDNEW
RGD ID:8673952
Promoter ID:EPDNEW_M15007
Type:initiation region
Name:Upp1_3
Description:Mus musculus uridine phosphorylase 1 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15006  EPDNEW_M15008  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38119,118,126 - 9,118,186EPDNEW
RGD ID:8673954
Promoter ID:EPDNEW_M15008
Type:initiation region
Name:Upp1_1
Description:Mus musculus uridine phosphorylase 1 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15006  EPDNEW_M15007  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38119,118,627 - 9,118,687EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1097668 AgrOrtholog
Ensembl Genes ENSMUSG00000020407 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000020677 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000099063 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000123285 UniProtKB/TrEMBL
  ENSMUSP00000125934 UniProtKB/TrEMBL
  ENSMUSP00000127473 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000129276 UniProtKB/TrEMBL
  ENSMUSP00000129787 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020677 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000101525 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000130522 UniProtKB/TrEMBL
  ENSMUST00000164791 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000166455 UniProtKB/TrEMBL
  ENSMUST00000170444 UniProtKB/TrEMBL
  ENSMUST00000172452 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1580 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Nucleoside_phosphorylase_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoside_phosphorylase_d UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoside_phosphorylase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Uridine_phosphorylase_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22271 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1097668 ENTREZGENE
NCBI Gene 22271 ENTREZGENE
Pfam PNP_UDP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB UPP1 RGD
PhenoGen Upp1 PhenoGen
PROSITE PNP_UDP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53167 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs euk_UDPppase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9Q391_MOUSE UniProtKB/TrEMBL
  E9Q5K7_MOUSE UniProtKB/TrEMBL
  F6YBT6_MOUSE UniProtKB/TrEMBL
  P52624 ENTREZGENE
  Q5SUC6_MOUSE UniProtKB/TrEMBL
  Q5SUC8 ENTREZGENE, UniProtKB/TrEMBL
  UPP1_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8JZX0 UniProtKB/Swiss-Prot