UPP1 (uridine phosphorylase 1) - Rat Genome Database

Name: UPP1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: UPP1 (uridine phosphorylase 1) Sus scrofa

Analyze

Symbol:

UPP1

Name:

uridine phosphorylase 1

RGD ID:

14114960

Description:

ENCODES a protein that exhibits deoxyuridine phosphorylase activity (ortholog); thymidine phosphorylase activity (ortholog); uridine phosphorylase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); long QT syndrome (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	UPP1 (uridine phosphorylase 1)	HGNC	EggNOG, Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Upp1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Upp1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Upp1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	UPP1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	UPP1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Upp1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	UPP1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Upp1 (uridine phosphorylase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	UPP2 (uridine phosphorylase 2)	HGNC	OrthoDB

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	48,418,385 - 48,440,736 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	48,418,385 - 48,440,414 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

allergic contact dermatitis (ISO)

long QT syndrome (ISO)

middle cerebral artery infarction (ISO)

pleomorphic xanthoastrocytoma (ISO)

respiratory allergy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to glucose starvation (ISO)

CMP catabolic process (ISO)

dCMP catabolic process (ISO)

dTMP catabolic process (ISO)

dUMP catabolic process (ISO)

nucleoside metabolic process (IEA)

nucleotide catabolic process (IEA)

pyrimidine nucleotide metabolic process (ISO)

UMP catabolic process (ISO)

UMP salvage (IEA)

uridine catabolic process (IEA,ISO)

uridine metabolic process (ISO)

Cellular Component

cytoplasm (IEA)

cytosol (ISO)

nucleoplasm (IEA)

Molecular Function

deoxyuridine phosphorylase activity (ISO)

identical protein binding (IEA)

thymidine phosphorylase activity (ISO)

uridine phosphorylase activity (IEA,ISO)

References

Genomics

Comparative Map Data

UPP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	48,418,385 - 48,440,736 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	48,418,385 - 48,440,414 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

UPP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	7	48,088,628 - 48,108,736 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	7	48,088,308 - 48,108,736 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	7	48,128,301 - 48,148,333 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	7	48,128,355 - 48,148,330 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	48,094,880 - 48,114,855 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	7	48,227,538 - 48,247,515 (+)	NCBI
Cytogenetic Map	7	p12.3	NCBI
HuRef	7	48,013,948 - 48,033,924 (+)	NCBI		HuRef
CHM1_1	7	48,131,900 - 48,152,030 (+)	NCBI		CHM1_1
CRA_TCAGchr7v2	7	48,168,224 - 48,188,201 (+)	NCBI

Upp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	9,068,008 - 9,086,170 (+)	NCBI	GRCm39		mm39
GRCm38	11	9,118,008 - 9,136,170 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	9,118,103 - 9,136,170 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	9,018,011 - 9,036,173 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	9,018,106 - 9,036,167 (+)	NCBI			mm8
Celera	11	9,551,715 - 9,569,878 (+)	NCBI		Celera
Cytogenetic Map	11	A1	NCBI

Upp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	14	83,809,495 - 83,829,299 (+)	NCBI
Rnor_6.0 Ensembl	14	89,314,176 - 89,334,276 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	14	89,314,234 - 89,334,060 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	14	89,112,302 - 89,132,102 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	89,651,264 - 89,669,630 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	14	89,669,068 - 89,688,775 (+)	NCBI
Celera	14	82,846,265 - 82,864,631 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Upp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	5,365,877 - 5,385,336 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	5,365,912 - 5,385,336 (-)	NCBI	ChiLan1.0	ChiLan1.0

UPP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	7	48,838,901 - 48,858,189 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	48,838,893 - 48,858,185 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	7	48,729,975 - 48,749,598 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

UPP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	108,215 - 120,213 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Upp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936478	22,508,602 - 22,531,604 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UPP1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	10,686,600 - 10,707,181 (-)	NCBI
ChlSab1.1 Ensembl	21	10,686,093 - 10,706,347 (-)	Ensembl

Upp1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624740	5,517,387 - 5,531,594 (-)	NCBI

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	nervous system	reproductive system	respiratory system
High
Medium				1		1	3
Low	8	2	3	4	5
Below cutoff	2				9

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021078788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021078790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002340288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK345112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01003884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000024494 ⟹ ENSSSCP00000027238

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	18	48,418,385 - 48,426,629 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000052968 ⟹ ENSSSCP00000037244

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	18	48,418,385 - 48,440,460 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000065553 ⟹ ENSSSCP00000048025

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	18	48,418,396 - 48,440,736 (-)	Ensembl

RefSeq Acc Id:

XM_021078788 ⟹ XP_020934447

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	18	48,418,385 - 48,440,334 (-)	NCBI

Sequence:

show sequence

GGGGAGGGGCGGGGCCGGGCCGCTGGGGACCCCCCGGCTGGCCTGGCGCGCGTATATCCGCCGG
GACTCCGCTCGCTCGCCGGCACCTCTGGGACCTGCGGAGGAACTGCTCTCGCTCGGCCCCAGGT
CGCATCTTTGTGGCCGGAGGCGCACACGTGTGGCGGTCCCTGCGCGGTGAAGGGTCTTCGGCCG
GCGCTCTGCTTTCGGGAAGCATCTTGCCGGGTCCTGCCTCAGTTGAGAGATGGCCTCTGCAGGG
GCTGAAACAAAGAAACTTGGAAATGACAATGACTTCGTACGGCTGAGCAATCCCCACTTAGCAA
CGATGAAGGAAGACGTTCTGTACCATTTCAGCCTCAGCACGGGCACCCACGATTTCCCGGCTAT
GTTTGGAGATGTGAAGTTTGTGTGCGTCGGGGGAAGCCCTTCCCGGATGAAAGCCTTCATCCAG
TACGTGGCCGTGGAGCTGGGCCTTGACGTCCCAGGCGCAGACTATCCCAACATCTGTGTGGGCA
CCGACCGCTATGCCATGTTTAAAGTGGGCCCGGTGCTGTCTGTCAGCCACGGGATGGGCATTCC
CTCCATTGCCATCATGCTGCACGAGCTCATCAAGCTGCTGTACCACGCGCGGTGCTCCGGCGTC
ACCATCATCCGCATCGGCACCTCTGGCGGGATAGGTCTGGAGCCTGGCTCTGTGGTCATCACCC
GGCAGGCGGTGGACCCCTGCTTCAAGCCAGAGTTCGAGCAGGTGGTCCTCGGGAAGCGGGTGGT
CCGCAGCACCCACCTGGATGAGCCGCTGATGGAGGAGCTGGCGCAGTGCTCCGCGGACCTGGGC
GAGTTCCCCACGGTGGTGGGCAACACCATGTGCACCCTGGACTTCTACGAAGGGCAAGGCCGCC
TGGACGGCGCTCTCTGCTCCTACGCGGAGAAGGATAAGCGGGAGTACCTGAACGCGGCCCACGC
AGCTGGCGTGCGCAACATCGAGATGGAATCGTCTGTCTTCGCCGCCATGTGCAACGCCTGTGGC
CTCCGAGCGGCGGTGGTGTGTGTCACCCTCCTCAACCGCCTGGAAGGCGACCAGATCAGCAGCC
CCCACGAGGTGCTGGTCGAGTACCAGCAGCGGCCCCAGCGGCTGGTGGGCCACTTCATCAAGAA
GCGCCTCTCAGCAGCCTGAGGTCCCTCGTCTCTGGACATGAGTGGTGTTATTGCTGCAAATAAA
ATCATCACCACAATCTC

hide sequence

RefSeq Acc Id:

XM_021078790 ⟹ XP_020934449

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	18	48,418,385 - 48,440,414 (-)	NCBI

Sequence:

show sequence

GAAGGAGGAAACGGCGGGAGGAGGGTCCTGCCTCAGTTGAGAGATGGCCTCTGCAGGGGCTGAA
ACAAAGAAACTTGGAAATGACAATGACTTCGTACGGCTGAGCAATCCCCACTTAGCAACGATGA
AGGAAGACGTTCTGTACCATTTCAGCCTCAGCACGGGCACCCACGATTTCCCGGCTATGTTTGG
AGATGTGAAGTTTGTGTGCGTCGGGGGAAGCCCTTCCCGGATGAAAGCCTTCATCCAGTACGTG
GCCGTGGAGCTGGGCCTTGACGTCCCAGGCGCAGACTATCCCAACATCTGTGTGGGCACCGACC
GCTATGCCATGTTTAAAGTGGGCCCGGTGCTGTCTGTCAGCCACGGGATGGGCATTCCCTCCAT
TGCCATCATGCTGCACGAGCTCATCAAGCTGCTGTACCACGCGCGGTGCTCCGGCGTCACCATC
ATCCGCATCGGCACCTCTGGCGGGATAGGTCTGGAGCCTGGCTCTGTGGTCATCACCCGGCAGG
CGGTGGACCCCTGCTTCAAGCCAGAGTTCGAGCAGGTGGTCCTCGGGAAGCGGGTGGTCCGCAG
CACCCACCTGGATGAGCCGCTGATGGAGGAGCTGGCGCAGTGCTCCGCGGACCTGGGCGAGTTC
CCCACGGTGGTGGGCAACACCATGTGCACCCTGGACTTCTACGAAGGGCAAGGCCGCCTGGACG
GCGCTCTCTGCTCCTACGCGGAGAAGGATAAGCGGGAGTACCTGAACGCGGCCCACGCAGCTGG
CGTGCGCAACATCGAGATGGAATCGTCTGTCTTCGCCGCCATGTGCAACGCCTGTGGCCTCCGA
GCGGCGGTGGTGTGTGTCACCCTCCTCAACCGCCTGGAAGGCGACCAGATCAGCAGCCCCCACG
AGGTGCTGGTCGAGTACCAGCAGCGGCCCCAGCGGCTGGTGGGCCACTTCATCAAGAAGCGCCT
CTCAGCAGCCTGAGGTCCCTCGTCTCTGGACATGAGTGGTGTTATTGCTGCAAATAAAATCATC
ACCACAATCTC

hide sequence

RefSeq Acc Id:

XR_002340288

RefSeq Status:

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	18	48,418,389 - 48,440,327 (-)	NCBI

Sequence:

show sequence

GGCGGGGCCGGGCCGCTGGGGACCCCCCGGCTGGCCTGGCGCGCGTATATCCGCCGGGACTCCG
CTCGCTCGCCGGCACCTCTGGGACCTGCGGAGGAACTGCTCTCGCTCGGCCCCAGGTCGCATCT
TTGTGGCCGGAGGCGCACACGTGTGGCGGTCCCTGCGCGGTGAAGGGTCTTCGGCCGGCGCTCT
GCTTTCGGGAAGCATCTTGCCGGGTCCTGCCTCAGTTGAGAGATGGCCTCTGCAGGGGCTGAAA
CAAAGAAACTTGGAAATGACAATGACTTCGTACGGCTGAGCAATCCCCACTTAGCAACGATGAA
GGAAGACGTTCTGTACCATTTCAGCCTCAGCACGGGCACCCACGATTTCCCGGCTATGTTTGGA
GATGTGAAGTTTGTGTGCGTCGGGGGAAGCCCTTCCCGGATGAAAGCCTTCATCCAGTACGTGG
CCGTGGAGCTGGGCCTTGACGTCCCAGGCGCAGACTATCCCAACATCTGTGTGGGCACCGACCG
CTATGCCATGTTTAAAGTGGGCCCGGTGCTGTCTGTCAGCCACGGGATGGGCATTCCCTCCATT
GCCATCATGCTGCACGAGCTCATCAAGCTGCTGTACCACGCGCGGTGCTCCGGCGTCACCATCA
TCCGCATCGGCACCTCTGGCGGGATAGGTCAGTGTGCAGAGCACCGAGTGGATGCGGGCGGGGA
TGGGGCAGCGTGGGGCCCCAGAGCTTCTGCCTGGGCTGTGTTTGAGCAGAGCTCAGCAGCAGCA
GGCATGAAAAGAAGTGATACATTGTTTTGTTTGCTCAGCTACTGCTCCCAAACCACACCCCAGA
AACAGGCTAGAAGAGGCACCACCAGGCCACGTGTCCTCGAAAACGCATCCTTTAGGGATTACAC
ACGGGTGCCATCTTATTTGCTTGATTCTCTCTTTTTAGTCTTTCTAATCCCTCTTTTCTCTGCC
TTTCTCCTCTACTTTGCTCACTCCTCCTCCCTCTTCCTGCAAGGATTTGAAGCAGCGTATGAGA
AAACCTACAGGAAAACCAAAGGGGGAAAAGAGGTGGCATACAAAATTAAGATAAGTGTCCTTAA
GTTGCCTAAAAGTCCCCGGTGCTCAACATATATTTTTAACATCACAGAGACAGCAAAGAAAGCA
GAGGGTGCAGTGAGAGGCGAAACGCTTAAAATTGTGTTGCTTTTTAAGCCAAAGTCTTTGAGGC
AAACTCGTTTTATGTAAGTTGTCCTACCCTCTAACATCCCAGTTCTGGGCTGGACTTTTGTCTA
AAAACTGGCTTCTAGCAATTCTCACTCCTGCCAAGGAGCTGGGAGCTGCTGGAGGGAGGCTTGC
TATTGTCGGCCCGGCCTCTGTGCATTTGTTGCTGATGGTCCAGGCCTGACCTCCCCTGCATCTA
TAGGGTAATTCTAAAATTCAGGTTTACTCACTATGAAAGCGGATTGCTGAGGACCCTGAATCTT
CTGGCTACATGATCTCATTTTTCCTTTCACTGTGTAGGCAGATTGACATGTAAAATTGGCGTTT
GTGGATTGCAATGTGAAGTTTAAAGGGGTTCTTTGGAGAACATCCCAATGGCCATGAACTCCTT
GGTCCGATACATTTAATCTGTGATGCCATCGACCGATGGACTCCCAGCTGTGCACATGGCACCA
GCATTGGCCAGGACCTCTAGCAAATCCTTCTTGAGTTCTTGCTTCGGAGAGATTTTAAAACCAA
TACTCAAGGAGTTTCCGCTGATTCTGTTCAGTGGATTATGAACCTGACATAGCATCCATAAGGA
TGTGAAGTTTGATCCCTGGCCTCAATCTGTGGTTTAAGAATCCGGCCTTGCCATGGCTGTGGCA
TAGGCTGCAGCTGCGGCTCTGATTCAGCCCCTGGCTCTGGGAATTTCCATATGCCGCAGGTGTA
GCCGTAAAAAGAAAAAAAGTACAATAAATAAATAAATAGTAAATTAGACAATCAGAGGGAATTC
TGAAAAGGATAGGGTGGGTTTCAAGTTGCCCAAAATTGCCCTCATAAGAATGGGCCCAACAACT
AGAGAGACAGACCCCAAACCCTGACAGTATTGGTGGCAGAGTGTGCCATGGCATCCCCACAAAC
CCCAAAATAGGAACAGAGGGCGGGTGGCTTATGGGCCCCTGCCCGGGAGGAAGCACAGGGCGAC
TCCAGGGTTTCTGACGGACTTGAGATTGTGCAGCGGCCCACAGGTGTCCCGGAGAAGGGTGGGG
CCTGTGTGAGGAGCAGCAGCTGCCAGAAGCGGGTCTGCAGCCTCCACTTTGAGGTCTGAAGGGG
CTTGAAAATTCTAGGCCCCATGAATTCCTGAAAGCCATCGTCTGAGCTTTCATCCAGGCCCTAA
CTCCTTGTGGGGAGAAAGCCGAAGAAGGTCTGTGTTGACCAGAGAAGGAAAGCAGCTGGGGAGA
GAAAGTCCAGATAAACACGCAGGCGGCCCAGCAGAGCCAGAGCCTGACAACTGGCTCCAATCTG
CTAACATTTCACGAAAGCAGCTGGTGTGGGGCCTTTGGAACAGATCATCTCCAGGCTTCTCCTT
CCTTCCTAAAGGTTTAGAAAAACTGATATCCCGTTAAAGTAAGTGTGGCGAGGCCGTGGGTCAA
ACCCCACGCATGTAGTGGAAGACCAGAGACCGAGGAGCAGAACACTGTCCCTACAAGCAAGAAA
CCCCAGGAAGGCACAGGAAGCAGAACCTGGAGGGAAATGAGGCCATCAGGAGCTGGGCACTGCT
GGAGCCGGGTCTTGTCTACTTCTGTATTTACCTGGCACCTTAAATAATCAAAAGGTACAAACCA
GGGACCAGTCAGAGTTCTCACTGTGGCGCAGCAGGATCCATGGCATCTCTACAGCAGCCAGGGC
ACGGGTTCTATCCCCAGCCTGGCACTGGCACTGCCACAGCTGTGGTGTAGGTCCAGCGGCAGTT
CTGATCTGATCCCTGGCCTGGGAATGCCATATGCTTTGGGGTGGCCAGAAATGAAAAAATAAAA
ACAGAACCAGCTGCACACATTCTGGAAAGGGAGCACTGGACACTGAAAACAGCAGGAACTAGGA
AACCACAAGCACTTGGTGGGCATGGGACGCCCTGGCAATGTCACCTTTTGCACTTTGCCATGTT
TTCTGTATTGCCTGTGCACGTCTTACCTTTATCATCTGAAAAAACAAACAAACAAAAAACCCAA
AATCGGATGCAGAAAGAGATCCTTGCCTGTTTCTTTCTAGAAGAAATCCCCCAGTGTTTCCGGG
CACGGACAGGTCCCTTTCCTTCTTGCCCGAGCATTCCTGTGCCCCTTGGCAGCCTGGACACCTG
CTTGTTCCTTTCAGGTCTGGAGCCTGGCTCTGTGGTCATCACCCGGCAGGCGGTGGACCCCTGC
TTCAAGCCAGAGTTCGAGCAGGTGGTCCTCGGGAAGCGGGTGGTCCGCAGCACCCACCTGGATG
AGCCGCTGATGGAGGAGCTGGCGCAGTGCTCCGCGGACCTGGGCGAGTTCCCCACGGTGGTGGG
CAACACCATGTGCACCCTGGACTTCTACGAAGGGCAAGGCCGCCTGGACGGCGCTCTCTGCTCC
TACGCGGAGAAGGATAAGCGGGAGTACCTGAACGCGGCCCACGCAGCTGGCGTGCGCAACATCG
AGATGGAATCGTCTGTCTTCGCCGCCATGTGCAACGCCTGTGGCCTCCGAGCGGCGGTGGTGTG
TGTCACCCTCCTCAACCGCCTGGAAGGCGACCAGATCAGCAGCCCCCACGAGGTGCTGGTCGAG
TACCAGCAGCGGCCCCAGCGGCTGGTGGGCCACTTCATCAAGAAGCGCCTCTCAGCAGCCTGAG
GTCCCTCGTCTCTGGACATGAGTGGTGTTATTGCTGCAAATAAAATCATCACCACAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020934447	(Get FASTA)	NCBI Sequence Viewer
	XP_020934449	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_020934449 ⟸ XM_021078790

- Sequence:

show sequence

MASAGAETKKLGNDNDFVRLSNPHLATMKEDVLYHFSLSTGTHDFPAMFGDVKFVCVGGSPSRM
KAFIQYVAVELGLDVPGADYPNICVGTDRYAMFKVGPVLSVSHGMGIPSIAIMLHELIKLLYHA
RCSGVTIIRIGTSGGIGLEPGSVVITRQAVDPCFKPEFEQVVLGKRVVRSTHLDEPLMEELAQC
SADLGEFPTVVGNTMCTLDFYEGQGRLDGALCSYAEKDKREYLNAAHAAGVRNIEMESSVFAAM
CNACGLRAAVVCVTLLNRLEGDQISSPHEVLVEYQQRPQRLVGHFIKKRLSAA

hide sequence

RefSeq Acc Id:

XP_020934447 ⟸ XM_021078788

- Sequence:

show sequence

MASAGAETKKLGNDNDFVRLSNPHLATMKEDVLYHFSLSTGTHDFPAMFGDVKFVCVGGSPSRM
KAFIQYVAVELGLDVPGADYPNICVGTDRYAMFKVGPVLSVSHGMGIPSIAIMLHELIKLLYHA
RCSGVTIIRIGTSGGIGLEPGSVVITRQAVDPCFKPEFEQVVLGKRVVRSTHLDEPLMEELAQC
SADLGEFPTVVGNTMCTLDFYEGQGRLDGALCSYAEKDKREYLNAAHAAGVRNIEMESSVFAAM
CNACGLRAAVVCVTLLNRLEGDQISSPHEVLVEYQQRPQRLVGHFIKKRLSAA

hide sequence

RefSeq Acc Id:

ENSSSCP00000027238 ⟸ ENSSSCT00000024494

RefSeq Acc Id:

ENSSSCP00000048025 ⟸ ENSSSCT00000065553

RefSeq Acc Id:

ENSSSCP00000037244 ⟸ ENSSSCT00000052968

Protein Domains

PNP_UDP_1

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000030388	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00070014319	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000027238	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000037244	UniProtKB/TrEMBL
	ENSSSCP00000048025	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00070023363	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000024494	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000052968	UniProtKB/TrEMBL
	ENSSSCT00000065553	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00070028065	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1580	UniProtKB/TrEMBL
InterPro	Nucleoside_phosphorylase_CS	UniProtKB/TrEMBL
	Nucleoside_phosphorylase_d	UniProtKB/TrEMBL
	Nucleoside_phosphorylase_sf	UniProtKB/TrEMBL
	Uridine_phosphorylase_euk	UniProtKB/TrEMBL
NCBI Gene	UPP1	ENTREZGENE
Pfam	PNP_UDP_1	UniProtKB/TrEMBL
PROSITE	PNP_UDP_1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53167	UniProtKB/TrEMBL
TIGRFAMs	euk_UDPppase	UniProtKB/TrEMBL
UniProt	A0A287A0H1_PIG	UniProtKB/TrEMBL
	A0A480S6M1_PIG	UniProtKB/TrEMBL
	A0A4X1U3H6_PIG	UniProtKB/TrEMBL
	I3LSZ5_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:94725	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD