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Gene: Slc66a1 (solute carrier family 66 member 1) Rattus norvegicus
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Symbol: Slc66a1
Name: solute carrier family 66 member 1
Description: Exhibits basic amino acid transmembrane transporter activity. Involved in amino acid homeostasis. Localizes to the lysosomal membrane. Orthologous to human SLC66A1 (solute carrier family 66 member 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362642; lysosomal amino acid transporter 1 homolog; PQ loop repeat containing 2; PQ-loop repeat-containing protein 2; Pqlc2
Orthologs:
Homo sapiens (human) : SLC66A1 (solute carrier family 66 member 1)  HGNC  Alliance
Mus musculus (house mouse) : Pqlc2 (PQ loop repeat containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc66a1 (solute carrier family 66 member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC66A1 (solute carrier family 66 member 1)
Canis lupus familiaris (dog) : SLC66A1 (solute carrier family 66 member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc66a1 (solute carrier family 66 member 1)
Sus scrofa (pig) : SLC66A1 (solute carrier family 66 member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05157,744,945 - 157,759,370 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5157,745,490 - 157,759,322 (-)Ensembl
Rnor_5.05161,485,179 - 161,499,508 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45158,087,137 - 158,097,572 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15158,097,687 - 158,106,359 (-)NCBI
Celera5149,924,109 - 149,930,042 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Slc66a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311627
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.