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Gene: Mynn (myoneurin) Rattus norvegicus

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Symbol:

Mynn

Name:

myoneurin

RGD ID:

1307889

Description:

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Predicted to be located in nucleoplasm. Orthologous to human MYNN (myoneurin); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC361924; MGC108895

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYNN (myoneurin)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB
Mus musculus (house mouse):	Mynn (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mynn (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYNN (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYNN (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mynn (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MYNN (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYNN (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mynn (myoneurin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MYNN (myoneurin)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mynn (myoneurin)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mynn (myoneurin)	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mynn	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	114,708,150 - 114,726,450 (-)	NCBI		GRCr8
mRatBN7.2	2	112,779,654 - 112,797,188 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	112,779,657 - 112,796,397 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	119,431,002 - 119,448,295 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	117,543,564 - 117,560,857 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	112,260,576 - 112,277,875 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	116,397,154 - 116,414,702 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	116,398,242 - 116,413,873 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	136,090,953 - 136,108,487 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	117,199,510 - 117,215,148 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	117,144,478 - 117,160,110 (-)	NCBI
Celera	2	107,959,621 - 107,975,259 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Mynn	Rat	autosomal dominant dyskeratosis congenita 1		ISO	MYNN (Homo sapiens)	8554872	ClinVar Annotator: match by term: Dyskeratosis congenita and autosomal dominant 1	ClinVar	PMID:28492532
Mynn	Rat	chronic recurrent multifocal osteomyelitis		ISO	MYNN (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chronic osteomyelitis	ClinVar
Mynn	Rat	Fanconi-Bickel syndrome		ISO	MYNN (Homo sapiens)	8554872	ClinVar Annotator: match by term: Fanconi-Bickel syndrome	ClinVar	PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Mynn	Rat	(-)-demecolcine	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Demecolcine results in decreased expression of MYNN mRNA	CTD	PMID:23649840
Mynn	Rat	1,2-dimethylhydrazine	multiple interactions	ISO	Mynn (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of MYNN mRNA	CTD	PMID:22206623
Mynn	Rat	1,2-dimethylhydrazine	affects expression	ISO	Mynn (Mus musculus)	6480464	1 and 2-Dimethylhydrazine affects the expression of MYNN mRNA	CTD	PMID:22206623
Mynn	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Mynn (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of MYNN mRNA	CTD	PMID:21570461 and PMID:26377647
Mynn	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of MYNN mRNA	CTD	PMID:33387578
Mynn	Rat	2,4-dinitrotoluene	affects expression	EXP		6480464	2 and 4-dinitrotoluene affects the expression of MYNN mRNA	CTD	PMID:21346803
Mynn	Rat	2-hydroxypropanoic acid	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Lactic Acid results in decreased expression of MYNN mRNA	CTD	PMID:30851411
Mynn	Rat	6-propyl-2-thiouracil	decreases expression	EXP		6480464	Propylthiouracil results in decreased expression of MYNN mRNA	CTD	PMID:30047161
Mynn	Rat	acrylamide	increases expression	EXP		6480464	Acrylamide results in increased expression of MYNN mRNA	CTD	PMID:28959563
Mynn	Rat	aflatoxin B1	increases expression	ISO	Mynn (Mus musculus)	6480464	Aflatoxin B1 results in increased expression of MYNN mRNA	CTD	PMID:19770486
Mynn	Rat	amitrole	decreases expression	EXP		6480464	Amitrole results in decreased expression of MYNN mRNA	CTD	PMID:30047161
Mynn	Rat	ammonium chloride	affects expression	EXP		6480464	Ammonium Chloride affects the expression of MYNN mRNA	CTD	PMID:16483693
Mynn	Rat	benzene	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Benzene results in decreased expression of MYNN mRNA	CTD	PMID:15929907
Mynn	Rat	benzo[a]pyrene diol epoxide I	affects expression	ISO	MYNN (Homo sapiens)	6480464	7 more ...	CTD	PMID:20382639
Mynn	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of MYNN mRNA	CTD	PMID:25181051 more ...
Mynn	Rat	bisphenol A	affects methylation	ISO	Mynn (Mus musculus)	6480464	bisphenol A affects the methylation of MYNN promoter	CTD	PMID:27334623
Mynn	Rat	butanal	increases expression	ISO	MYNN (Homo sapiens)	6480464	butyraldehyde results in increased expression of MYNN mRNA	CTD	PMID:26079696
Mynn	Rat	C60 fullerene	increases expression	EXP		6480464	fullerene C60 results in increased expression of MYNN mRNA	CTD	PMID:19167457
Mynn	Rat	calcitriol	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Calcitriol results in decreased expression of MYNN mRNA	CTD	PMID:21592394
Mynn	Rat	calcitriol	multiple interactions	ISO	MYNN (Homo sapiens)	6480464	[Testosterone co-treated with Calcitriol] results in decreased expression of MYNN mRNA	CTD	PMID:21592394
Mynn	Rat	celastrol	decreases expression	ISO	MYNN (Homo sapiens)	6480464	celastrol results in decreased expression of MYNN mRNA	CTD	PMID:17010675
Mynn	Rat	CGP 52608	multiple interactions	ISO	MYNN (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to MYNN gene]	CTD	PMID:28238834
Mynn	Rat	choline	multiple interactions	ISO	Mynn (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of MYNN gene	CTD	PMID:20938992
Mynn	Rat	CU-O LINKAGE	increases expression	ISO	MYNN (Homo sapiens)	6480464	cupric oxide results in increased expression of MYNN mRNA	CTD	PMID:22077320
Mynn	Rat	cylindrospermopsin	increases expression	ISO	MYNN (Homo sapiens)	6480464	cylindrospermopsin results in increased expression of MYNN mRNA	CTD	PMID:24921660
Mynn	Rat	Dibutyl phosphate	affects expression	ISO	MYNN (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of MYNN mRNA	CTD	PMID:37042841
Mynn	Rat	dicrotophos	decreases expression	ISO	MYNN (Homo sapiens)	6480464	dicrotophos results in decreased expression of MYNN mRNA	CTD	PMID:28302478
Mynn	Rat	dorsomorphin	multiple interactions	ISO	MYNN (Homo sapiens)	6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of MYNN mRNA	CTD	PMID:27188386
Mynn	Rat	doxorubicin	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Doxorubicin results in decreased expression of MYNN mRNA	CTD	PMID:29803840
Mynn	Rat	ethyl methanesulfonate	increases expression	ISO	MYNN (Homo sapiens)	6480464	Ethyl Methanesulfonate results in increased expression of MYNN mRNA	CTD	PMID:23649840
Mynn	Rat	folic acid	multiple interactions	ISO	Mynn (Mus musculus)	6480464	[1 more ...	CTD	PMID:20938992 and PMID:22206623
Mynn	Rat	folic acid	increases expression	ISO	MYNN (Homo sapiens)	6480464	Folic Acid results in increased expression of MYNN mRNA	CTD	PMID:21867686
Mynn	Rat	formaldehyde	increases expression	ISO	MYNN (Homo sapiens)	6480464	Formaldehyde results in increased expression of MYNN mRNA	CTD	PMID:20655997 and PMID:23649840
Mynn	Rat	gedunin	decreases expression	ISO	MYNN (Homo sapiens)	6480464	gedunin results in decreased expression of MYNN mRNA	CTD	PMID:17010675
Mynn	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of MYNN mRNA	CTD	PMID:33387578
Mynn	Rat	gold atom	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Gold results in decreased expression of MYNN mRNA	CTD	PMID:25523186
Mynn	Rat	gold(0)	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Gold results in decreased expression of MYNN mRNA	CTD	PMID:25523186
Mynn	Rat	L-methionine	multiple interactions	ISO	Mynn (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of MYNN gene	CTD	PMID:20938992
Mynn	Rat	methyl methanesulfonate	increases expression	ISO	MYNN (Homo sapiens)	6480464	Methyl Methanesulfonate results in increased expression of MYNN mRNA	CTD	PMID:23649840
Mynn	Rat	methylmercury chloride	decreases expression	ISO	MYNN (Homo sapiens)	6480464	methylmercuric chloride results in decreased expression of MYNN mRNA	CTD	PMID:28001369
Mynn	Rat	methylmercury chloride	increases expression	ISO	MYNN (Homo sapiens)	6480464	methylmercuric chloride results in increased expression of MYNN mRNA	CTD	PMID:28001369
Mynn	Rat	phenobarbital	affects expression	ISO	MYNN (Homo sapiens)	6480464	Phenobarbital affects the expression of MYNN mRNA	CTD	PMID:19159669
Mynn	Rat	rac-lactic acid	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Lactic Acid results in decreased expression of MYNN mRNA	CTD	PMID:30851411
Mynn	Rat	resveratrol	multiple interactions	ISO	MYNN (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of MYNN mRNA	CTD	PMID:23557933
Mynn	Rat	SB 431542	multiple interactions	ISO	MYNN (Homo sapiens)	6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of MYNN mRNA	CTD	PMID:27188386
Mynn	Rat	sodium arsenite	increases expression	ISO	MYNN (Homo sapiens)	6480464	sodium arsenite results in increased expression of MYNN mRNA	CTD	PMID:38568856
Mynn	Rat	sulfadimethoxine	decreases expression	EXP		6480464	Sulfadimethoxine results in decreased expression of MYNN mRNA	CTD	PMID:30047161
Mynn	Rat	sunitinib	increases expression	ISO	MYNN (Homo sapiens)	6480464	Sunitinib results in increased expression of MYNN mRNA	CTD	PMID:31533062
Mynn	Rat	testosterone	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Testosterone results in decreased expression of MYNN mRNA	CTD	PMID:21592394
Mynn	Rat	testosterone	multiple interactions	ISO	MYNN (Homo sapiens)	6480464	[Testosterone co-treated with Calcitriol] results in decreased expression of MYNN mRNA	CTD	PMID:21592394
Mynn	Rat	thimerosal	increases expression	ISO	MYNN (Homo sapiens)	6480464	Thimerosal results in increased expression of MYNN mRNA	CTD	PMID:27188386
Mynn	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of MYNN mRNA	CTD	PMID:23411599 and PMID:34492290
Mynn	Rat	thiram	increases expression	ISO	MYNN (Homo sapiens)	6480464	Thiram results in increased expression of MYNN mRNA	CTD	PMID:38568856
Mynn	Rat	titanium dioxide	decreases methylation	ISO	Mynn (Mus musculus)	6480464	titanium dioxide results in decreased methylation of MYNN gene	CTD	PMID:35295148
Mynn	Rat	triphenyl phosphate	affects expression	ISO	MYNN (Homo sapiens)	6480464	triphenyl phosphate affects the expression of MYNN mRNA	CTD	PMID:37042841
Mynn	Rat	valproic acid	affects expression	ISO	MYNN (Homo sapiens)	6480464	Valproic Acid affects the expression of MYNN mRNA	CTD	PMID:25979313
Mynn	Rat	valproic acid	decreases expression	ISO	MYNN (Homo sapiens)	6480464	Valproic Acid results in decreased expression of MYNN mRNA	CTD	PMID:23179753 more ...
Mynn	Rat	valproic acid	multiple interactions	ISO	MYNN (Homo sapiens)	6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of MYNN mRNA	CTD	PMID:27188386
Mynn	Rat	vinclozolin	increases expression	EXP		6480464	vinclozolin results in increased expression of MYNN mRNA	CTD	PMID:23034163

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Mynn	Rat	cellular response to leukemia inhibitory factor	acts_upstream_of_or_within	ISO	Mynn (Mus musculus)	1624291	PMID:20439489	RGD	PMID:20439489
Mynn	Rat	cellular response to leukemia inhibitory factor	acts_upstream_of_or_within	IEA	UniProtKB:Q99MD8 and ensembl:ENSMUSP00000141951	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Mynn	Rat	regulation of transcription by RNA polymerase II	involved_in	IBA	FB:FBgn0004618 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Mynn	Rat	nucleoplasm	located_in	IEA	UniProtKB:Q9NPC7 and ensembl:ENSP00000326240	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Mynn	Rat	nucleoplasm	located_in	ISO	MYNN (Homo sapiens) more ...	1624291		RGD	GO_REF:0000052
Mynn	Rat	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Mynn	Rat	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	1600115	GO_REF:0000044	UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Mynn	Rat	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Mynn	Rat	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	FB:FBgn0004618 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Mynn	Rat	metal ion binding	enables	IEA	UniProtKB-KW:KW-0479	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Mynn	Rat	protein binding	enables	ISO	MYNN (Homo sapiens)	1624291	UniProtKB:G5E9A7 more ...	RGD	PMID:32296183 and PMID:32814053
Mynn	Rat	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IBA	MGI:1338823 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Mynn	Rat	zinc ion binding	enables	IEA	UniProtKB-KW:KW-0863	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:10873615	PMID:12477932	PMID:20439489

Mynn
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	114,708,150 - 114,726,450 (-)	NCBI		GRCr8
mRatBN7.2	2	112,779,654 - 112,797,188 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	112,779,657 - 112,796,397 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	119,431,002 - 119,448,295 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	117,543,564 - 117,560,857 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	112,260,576 - 112,277,875 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	116,397,154 - 116,414,702 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	116,398,242 - 116,413,873 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	136,090,953 - 136,108,487 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	117,199,510 - 117,215,148 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	117,144,478 - 117,160,110 (-)	NCBI
Celera	2	107,959,621 - 107,975,259 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

MYNN
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	169,773,396 - 169,789,716 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	169,773,396 - 169,789,716 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	169,491,184 - 169,507,504 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	170,973,547 - 170,988,032 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	170,973,916 - 170,988,034	NCBI
Celera	3	167,889,333 - 167,905,983 (+)	NCBI		Celera
Cytogenetic Map	3	q26.2	NCBI
HuRef	3	166,860,802 - 166,877,445 (+)	NCBI		HuRef
CHM1_1	3	169,453,864 - 169,470,515 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	172,557,621 - 172,573,941 (+)	NCBI		T2T-CHM13v2.0

Mynn
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	30,656,212 - 30,674,022 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	30,656,214 - 30,674,022 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	30,602,087 - 30,619,873 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	30,602,065 - 30,619,873 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	30,501,009 - 30,517,419 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	30,792,925 - 30,809,335 (+)	NCBI		MGSCv36	mm8
Celera	3	30,514,760 - 30,531,155 (+)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	14.27	NCBI

Mynn
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	32,200 - 44,127 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	32,200 - 44,127 (+)	NCBI	ChiLan1.0	ChiLan1.0

MYNN
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	167,666,802 - 167,681,677 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	167,671,782 - 167,686,400 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	166,786,529 - 166,802,362 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	174,840,160 - 174,856,668 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	174,840,394 - 174,856,661 (+)	Ensembl	panpan1.1		panPan2

MYNN
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	34,378,434 - 34,411,976 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	34,379,088 - 34,392,197 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	43,454,750 - 43,475,106 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	34,457,132 - 34,490,502 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	34,457,713 - 34,473,249 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	34,403,578 - 34,436,907 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	34,370,652 - 34,404,000 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	34,635,328 - 34,668,682 (+)	NCBI		UU_Cfam_GSD_1.0

Mynn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	100,976,825 - 101,027,939 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936593	2,629,794 - 2,645,258 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936593	2,629,750 - 2,645,211 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYNN
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	108,435,324 - 108,457,226 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	108,435,194 - 108,452,699 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	117,161,416 - 117,177,778 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MYNN
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	19,611,809 - 19,626,413 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	19,612,703 - 19,625,905 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	28,416,175 - 28,432,472 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mynn
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	47,822,991 - 47,833,988 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	47,823,818 - 47,835,298 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Mynn
59 total Variants

Assembly: Rnor_5.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
2	136102520	136102521	T	A	snv	F344/Jcl (KyushuU)	View more Information

Predicted Target Of

	Summary Value
Count of predictions:	93
Count of miRNA genes:	77
Interacting mature miRNAs:	91
Transcripts:	ENSRNOT00000010344
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	43162366	148478373	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	102803808	147803808	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1598865	Bp296	Blood pressure QTL 296	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	81018907	126018907	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
1578772	Stresp14	Stress response QTL 14	5	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	2	82345893	130923501	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	18960362	228801039	Rat
152025242	Bw191	Body weight QTL 191	3.62		body mass (VT:0001259)		2	38573329	122609194	Rat
1598862	Glom9	Glomerulus QTL 9	3.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	2	92337601	137337601	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	76539322	150540526	Rat
1598863	Cm65	Cardiac mass QTL 65	2.3		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	92337601	137337601	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	25413423	143657569	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
2300165	Bmd49	Bone mineral density QTL 49	4.8	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	2	88862519	133862519	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
2300170	Bmd45	Bone mineral density QTL 45	12.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
7411551	Bw131	Body weight QTL 131	29.6	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	2	67942638	112942638	Rat
8662836	Vetf8	Vascular elastic tissue fragility QTL 8	0.66		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	104559726	149559726	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	26917817	136917119	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	78665616	143657569	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
2300185	Bmd46	Bone mineral density QTL 46	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	112456140	212696837	Rat
61392	Bp6	Blood pressure QTL 6	7		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	80270434	125270434	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	112456140	212696837	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
1581552	Pur12	Proteinuria QTL 12	5.19	0.0009	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	2	112103657	148076632	Rat
1558653	Prcr1	Prostate cancer resistance QTL 1	5		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	2	72532993	157142209	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
7207808	Bmd89	Bone mineral density QTL 89	4.1		femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	2	88862519	133862519	Rat
1558648	Smcn1	Smooth muscle cell number QTL 1		0.039	blood vessel smooth muscle cell quantity (VT:0010525)	aorta smooth muscle cell count per unit vessel length (CMO:0001646)	2	59134147	127460910	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	28484589	169504100	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	28484589	169504100	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
61438	Cia7	Collagen induced arthritis QTL 7	4.6	0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	2	59324377	141596857	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	26917817	127469484	Rat

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001012178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AH011787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AH012036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC089853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000010344 ⟹ ENSRNOP00000010344

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	112,779,721 - 112,796,383 (-)	Ensembl
Rnor_6.0 Ensembl	2	116,398,242 - 116,413,873 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000078148 ⟹ ENSRNOP00000075326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	112,779,657 - 112,796,397 (-)	Ensembl
Rnor_6.0 Ensembl	2	116,398,674 - 116,413,043 (-)	Ensembl

RefSeq Acc Id:

NM_001012178 ⟹ NP_001012178

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,708,150 - 114,725,452 (-)	NCBI
mRatBN7.2	2	112,779,654 - 112,796,956 (-)	NCBI
Rnor_6.0	2	116,398,235 - 116,413,873 (-)	NCBI
Rnor_5.0	2	136,090,953 - 136,108,487 (-)	NCBI
RGSC_v3.4	2	117,199,510 - 117,215,148 (-)	RGD
Celera	2	107,959,621 - 107,975,259 (-)	RGD

Sequence:

show sequence

GGCGGTGAGAGAGTGAAGAAACTGTTTCCCTTGGGCGGATACGGATCAAGGGTAAAATACCATTCTGATACCAAAATGCAGTATTCACACCACTGTGAGCACCTTTTAGAGAGACTGAATAAACAACG
AGAAGCAGGATTTCTTTGTGACTGTACCATAGTGATTGGAGAATTCCAGTTCAAGGCGCATAGGAATGTGCTTGCCTCCTTTATTGGAATGTTAAGGAAATCCACCAGGCTGCTGACTATCTCAAAGT
AGAAGAGGTAGTAACAAAATGTAAAATAAAGATGGAGGATTTCGCCTTCATTGCTAGTCCCTCTTCTACAGAAATATCTAGTATTACTGGGAACATCGAGTTGAATCAACAGACCTGTCTTCTTACTC
TTCGAGATTATAACAATCGGGAGAAATCAGAAGTCTCCACAGACTCAGTTCAGGCAAACCCTAAACAACGGGTATTGACAAAGAAATCGTCTCAAAGTAAAAAGAAGAAAAAGGCCTTCAATTCCCAG
AACCCAGGGCGAGCTAAAGCACTGCAACACCACAGTGGTGTTTCAGAGAGTGCGTCTGTCGAGTTATTCCTGGATGCGAACAAGTTGTCCCCACCTGCAGTAGAACAAGTCATTCAAGGAAATGACAC
TTCAGAACTTGAGTTGACCTCAGTTGTGGAGAATACTTTTCCTGCACAAGATATTGTGCAAACTGTTACAGTCAAACGGAAACGTCGAAAATCACAGTCACATTGTGCCCTGAAAGAACACTCCATGT
CTAACATAGCCAGTGTAAAGAGTCCATATGAGCTGGAGAACGCCGGGGAAGAGCTGGACCCAAGGTATTCCAAGGCCAAGCCAATGTGTAACACGTGTGGGAAGGTGTTTTCAGAAGCCAGCAGCCTT
CGAAGGCACATGAGAATACACAAAGGAGTCAAGCCGTACGTCTGCCACTTGTGTGGAAAGGCGTTTACCCAGTGCAACCAGCTGAAAACTCATGTGAGGACTCACACAGGGGAAAGGCCATATAAATG
TGAACTGTGTGATAAAGGATTTGCTCAGAAATGCCAGCTGGTCTTCCATAGTCGCATGCATCATGGTGAGGAAAAACCCTATAAATGTGATGTGTGCAATTTACAGTTTGCAACTTCTAGCAATCTCA
AGATTCATGCAAGGAAACACAGTGGAGAAAAGCCATATGTCTGTGATAGGTGTGGGCAGAGATTTGCCCAGGCCAGCACCCTGACCTATCATGTCCGCAGGCACACTGGAGAAAAGCCTTACGTGTGC
GACACCTGCGGAAAGGCCTTTGCTGTCTCTAGCTCTCTCATCACTCATTCTCGGAAACACACAGGAGAACGACCATTTATCTGTGAATTATGTGGAAATTCTTACACTGACATTAAAAACTTAAAGAA
GCATAAAACAAAGGTCCATTCTGGTACAGATAAAAATGCAGATTGCAGTGTAGATGACCATGCTGTAAGTGAACAAGACTCCATACAGAGAAGTCCTTTGTCAGAAACGCTAGATGTGAAGCCTTCTG
ATATGACTCTACCCTTAGCGCTTCCTCTTGGGACTGAGGACCACCATATGCTTCTACCTGTCACGGATAGTCAGTCTCCTACATCAGACACACTGCTGAGGTCAACTGTGAATGGATATTCGGAACCA
CAGTTGATTTTTTTACAACAATTATATTGACTTCGAGGACATGGAATTGCTAAGGCATCCTTGGCAGTAAATGTAAACATGTCTGGTAAGGTGCATATTCATATGGACTCCCACTCAGTTGAGCTGTG
TGACCACTAGTTTTTATTCACGGAAGTAAAAGCACCGATTCTGATACTGCATCAGTCAGTGCTTGTTCTGGCTTTGACTTCCATTGTAAACAACCAGCCTGTCAAGGAGCGACTTCTACCATGGTGGC
CCTGTTTTGGGTGGGTAAGTTTTAGACACTGTTAAAGCTGCCTTAATTCCATCTCTTTTGCATTGTAGACTTACTTGATCCTTAGGTAGAATCTGCCCTGTGGGTTTTTCGTTGTTCTCTCCTTGCTG
TTTAAACAAAGTCTGCAGTAATAACAGCTTCAAAGTGTTTGTTTGTGAGGCCTGTGGACCAGTGTGGAAACTTTCGGAGGGATTGGAGTTCATGTTTATGTCTGAACATTTAGATACTAAGGAAGACT
TGTGCTATTTATTAATATATTCCTTTAGAGGTAACTTTTCTAATGAGGCCAAACGAAGTATTTCTCTTAAAACCCAGAAAATGTGTGTACATTTTTGTTCATTTAGAGTGAATTCAGTATTCAAGAAA
ACCAGTCGGTCCCCAGCTCCGAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001399702 ⟹ NP_001386631

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,708,150 - 114,725,452 (-)	NCBI
mRatBN7.2	2	112,779,654 - 112,796,956 (-)	NCBI

RefSeq Acc Id:

NM_001399703 ⟹ NP_001386632

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,708,150 - 114,725,452 (-)	NCBI
mRatBN7.2	2	112,779,654 - 112,796,956 (-)	NCBI

RefSeq Acc Id:

XM_006232233 ⟹ XP_006232295

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	114,708,217 - 114,726,450 (-)	NCBI
mRatBN7.2	2	112,779,654 - 112,797,188 (-)	NCBI
Rnor_6.0	2	116,397,154 - 116,414,702 (-)	NCBI
Rnor_5.0	2	136,090,953 - 136,108,487 (-)	NCBI

Sequence:

show sequence

CAACAAACGTTTCAGTTGTGCTTTTTAATATTTATGACGTCCGCAGGTTCTAGGGAAGAATCTG
CACGAACACATCAAAACTTTTTGACGCTTTTGTATAGCGCAGCGATAACTTTGCTCTTCTCCCTTTACTGCACTAACTCTGATTTCGAGGTAAATAATTGTGCTAAAATTATTCTGGGTCAGAAGCAG
GAAAACCTTTTCCGGTAGAAAGCCCACCTTCCTCTCACGTTGCGCATGCCCAGTGTGCCCTGCTGCTTTGCTTTGCTTTCCTGCATCTCAGCCTCTGTCACCAGGTAAGGGCATTCTGGAAGATGAGT
TTCGGTGTGCCGGCTCAAACAGAACTCTGGGGGTCCCAAGAGCTTTCGGATATGCAAAAGAGGAAGGAGTGATTGGTCTCGACTTAAGCATATCCCTCCCACCCACCACGGTCAAGAACCAGGGTGCA
CAACGCAGTCATCTCCACTGGAGGGGCGCTAATGAAGACAGGATGACAGGCGAGAAAAAGAACTACAACTCCCAGCATGCAGCGCGCAGCGCGGTTCCTGGAGAGGCCGGCTGTGCACTTGAGCCGGG
TCTCCGCCCAGATTCTGGGCCGACAGCGGTGGGCTGACAAGTGAGCGTCTGGCGCAGGATGTAAGTCAGCAGTGAGGTGTGATCCGGAGACCTGGGCATGCCGGGAAGTCAGGGCTCAGAGACCCAGC
TCGCCGGCCCTAGTGGACACCTAGAGTCCTATCTCCGGTGTCCCCATGGACCACACATCCGGACGTGACGCGACGGCGGAGGAGGCAGGGAGAGGAGGAGCGTCGCGGTGACGTCCTCCCAAGATGGC
GGTGAGAGAGTGAAGAAACTGTTTCCCTTGGGCGGATACGGATCAAGGGTAAAATACCATTCTGATACCAAAATGCAGTATTCACACCACTGTGAGCACCTTTTAGAGAGACTGAATAAACAACGAGA
AGCAGGATTTCTTTGTGACTGTACCATAGTGATTGGAGAATTCCAGTTCAAGGCGCATAGGAATGTGCTTGCCTCCTTTAGTGAGTATTTTGGTGCGATCTACAGAAGCACTTCTGAGAACAATGTTT
TTCTTGATCAGAGTCAGGTGAAGGCTGACGGATTTCAGAAACTGTTGGAGTTTATATATACAGGAACTTTAAATCTCGACAGTTGGAATGTTAAGGAAATCCACCAGGCTGCTGACTATCTCAAAGTA
GAAGAGGTAGTAACAAAATGTAAAATAAAGATGGAGGATTTCGCCTTCATTGCTAGTCCCTCTTCTACAGAAATATCTAGTATTACTGGGAACATCGAGTTGAATCAACAGACCTGTCTTCTTACTCT
TCGAGATTATAACAATCGGGAGAAATCAGAAGTCTCCACAGACTCAGTTCAGGCAAACCCTAAACAACGGGTATTGACAAAGAAATCGTCTCAAAGTAAAAAGAAGAAAAAGGCCTTCAATTCCCAGA
ACCCAGGGCGAGCTAAAGCACTGCAACACCACAGTGGTGTTTCAGAGAGTGCGTCTGTCGAGTTATTCCTGGATGCGAACAAGTTGTCCCCACCTGCAGTAGAACAAGTCATTCAAGGAAATGACACT
TCAGAACTTGAGTTGACCTCAGTTGTGGAGAATACTTTTCCTGCACAAGATATTGTGCAAACTGTTACAGTCAAACGGAAACGTCGAAAATCACAGTCACATTGTGCCCTGAAAGAACACTCCATGTC
TAACATAGCCAGTGTAAAGAGTCCATATGAGCTGGAGAACGCCGGGGAAGAGCTGGACCCAAGGTATTCCAAGGCCAAGCCAATGTGTAACACGTGTGGGAAGGTGTTTTCAGAAGCCAGCAGCCTTC
GAAGGCACATGAGAATACACAAAGGAGTCAAGCCGTACGTCTGCCACTTGTGTGGAAAGGCGTTTACCCAGTGCAACCAGCTGAAAACTCATGTGAGGACTCACACAGGGGAAAGGCCATATAAATGT
GAACTGTGTGATAAAGGATTTGCTCAGAAATGCCAGCTGGTCTTCCATAGTCGCATGCATCATGGTGAGGAAAAACCCTATAAATGTGATGTGTGCAATTTACAGTTTGCAACTTCTAGCAATCTCAA
GATTCATGCAAGGAAACACAGTGGAGAAAAGCCATATGTCTGTGATAGGTGTGGGCAGAGATTTGCCCAGGCCAGCACCCTGACCTATCATGTCCGCAGGCACACTGGAGAAAAGCCTTACGTGTGCG
ACACCTGCGGAAAGGCCTTTGCTGTCTCTAGCTCTCTCATCACTCATTCTCGGAAACACACAGGAGAACGACCATTTATCTGTGAATTATGTGGAAATTCTTACACTGACATTAAAAACTTAAAGAAG
CATAAAACAAAGGTCCATTCTGGTACAGATAAAAATGCAGATTGCAGTGTAGATGACCATGCTGTAAGTGAACAAGACTCCATACAGAGAAGTCCTTTGTCAGAAACGCTAGATGTGAAGCCTTCTGA
TATGACTCTACCCTTAGCGCTTCCTCTTGGGACTGAGGACCACCATATGCTTCTACCTGTCACGGATAGTCAGTCTCCTACATCAGACACACTGCTGAGGTCAACTGTGAATGGATATTCGGAACCAC
AGTTGATTTTTTTACAACAATTATATTGACTTCGAGGACATGGAATTGCTAAGGCATCCTTGGCAGTAAATGTAAACATGTCTGGTAAGGTGCATATTCATATGGACTCCCACTCAGTTGAGCTGTGT
GACCACTAGTTTTTATTCACGGAAGTAAAAGCACCGATTCTGATACTGCATCAGTCAGTGCTTGTTCTGGCTTTGACTTCCATTGTAAACAACCAGCCTGTCAAGGAGCGACTTCTACCATGGTGGCC
CTGTTTTGGGTGGGTAAGTTTTAGACACTGTTAAAGCTGCCTTAATTCCATCTCTTTTGCATTGTAGACTTACTTGATCCTTAGGTAGAATCTGCCCTGTGGGTTTTTCGTTGTTCTCTCCTTGCTGT
TTAAACAAAGTCTGCAGTAATAACAGCTTCAAAGTGTTTGTTTGTGAGGCCTGTGGACCAGTGTGGAAACTTTCGGAGGGATTGGAGTTCATGTTTATGTCTGAACATTTAGATACTAAGGAAGACTT
GTGCTATTTATTAATATATTCCTTTAGAGGTAACTTTTCTAATGAGGCCAAACGAAGTATTTCTCTTAAAACCCAGAAAATGTGTGTACATTTTTGTTCATTTAGAGTGAATTCAGTATTCAAGAAAA
CCAGTCGGTCCCCAGCTCCGAAAAAAAGAAAAGAAAAAGAAAACCAGTACTCAGATCAATTTTTGTTTGAGTTGAAACTATATTTTTTTAAATAGATATTTGGTGTTTTTAAGTGGTCAGAAGACAGT
TTTGGAATTTGATTCATTTTATATTTTATTAGATTTGTAGATTATTGGAAGTGAATATATAACAAGTTTTGGAAATTTTTGATAAGCCTATCTTGTATCAGTTATGCACTTTTTAAAATAAATGTTCT
AAAAAGAATTTTCTAGCTATAAAATACATACTAGAAATCACTTGGCTTCTAAATTTGATATATTACTTAGAAAAATCAAGAAGCTTGTGTTGCATGCCTAAGGCAGCACACATACACACAAATAGAAT
TAATATCCTAACTTCAGTTATAAGCTATACTTTTGGATTATCATTTTGTTTACCATTTTATATTGAGTTTTTTATAAACATGGGATTTCCGATTTTATGAATTAAACTGCAACTTTTGGTTGTTGGCT
GTAGCTTTAGAGTGGTCCTTTCCATGCCAGCTGGGTGTAGAGAACTCAGCGGCACCCCATCCCTCACGCCTGCTCCCTCTCTTCCTGCATATTCATTGATTTCACTTGGCATTGTAAGTTACAGTTTC
CCAGTCAGTTCCTGTGGCCGATGAAGTCATGGTGACTGTTTCTCTTCTCTGCCATCAGTTAGTTAGGTCTCACTTGTTTTCAGGATTTACACTGCACTGAAACAGACTCACGGTGTTCACTGATACTG
AACTCTTTGATCATAATTCTCCTGTTTGGGTCCAAGTCATAGAACTAAGAAGACATAATCGAACGCTCAGTTCTTACAAACTGCGGGTGTCTTCACATTTCTTAGAGCTATAACATTTCCACAGTAAA
TTACAACCGGTGAGCCTGACTGAACTAGCGAGAGAGTATGAAATACCACCTTTGTATAATAAACTTATTTTATTATTCAGCTAAAAAATCTGTGTGTATGTTAAATGAACATACTGAGTTTGAATAAA
ATTTGTAAGGTATAAAATGTTCAGCTAATCTTTTCTGGTTTAAGATCAATAAAAATTTACTGGAATATAACAAAACTGAAAAAA

hide sequence


Protein RefSeqs	NP_001012178	(Get FASTA)	NCBI Sequence Viewer
	NP_001386631	(Get FASTA)	NCBI Sequence Viewer
	NP_001386632	(Get FASTA)	NCBI Sequence Viewer
	XP_006232295	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH89853	(Get FASTA)	NCBI Sequence Viewer
	AAM95444	(Get FASTA)	NCBI Sequence Viewer
	AAN39285	(Get FASTA)	NCBI Sequence Viewer
	AAN39287	(Get FASTA)	NCBI Sequence Viewer
	EDM01167	(Get FASTA)	NCBI Sequence Viewer
	EDM01168	(Get FASTA)	NCBI Sequence Viewer
	EDM01169	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000010344
	ENSRNOP00000010344.6
	ENSRNOP00000075326
	ENSRNOP00000075326.1

RefSeq Acc Id:	NP_001012178 ⟸ NM_001012178
- Peptide Label:	isoform 3
- UniProtKB:	Q5FVP1 (UniProtKB/TrEMBL), F7F7X6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEDFAFIASPSSTEISSITGNIELNQQTCLLTLRDYNNREKSEVSTDSVQANPKQRVLTKKSSQSKKKKKAFNSQNPGRAKALQHHSGVSESASVELFLDANKLSPPAVEQVIQGNDTSELELTSVVE NTFPAQDIVQTVTVKRKRRKSQSHCALKEHSMSNIASVKSPYELENAGEELDPRYSKAKPMCNTCGKVFSEASSLRRHMRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGERPYKCELCDKGFAQK CQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGERPFICELCGNSYTDIKNLKKHKTKVHSGTD KNADCSVDDHAVSEQDSIQRSPLSETLDVKPSDMTLPLALPLGTEDHHMLLPVTDSQSPTSDTLLRSTVNGYSEPQLIFLQQLY hide sequence

RefSeq Acc Id:	XP_006232295 ⟸ XM_006232233
- Peptide Label:	isoform X1
- UniProtKB:	A6IHL9 (UniProtKB/TrEMBL), F7F7X6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKMEDFAFIASPSSTE ISSITGNIELNQQTCLLTLRDYNNREKSEVSTDSVQANPKQRVLTKKSSQSKKKKKAFNSQNPGRAKALQHHSGVSESASVELFLDANKLSPPAVEQVIQGNDTSELELTSVVENTFPAQDIVQTVTV KRKRRKSQSHCALKEHSMSNIASVKSPYELENAGEELDPRYSKAKPMCNTCGKVFSEASSLRRHMRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGERPYKCELCDKGFAQKCQLVFHSRMHHGEE KPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGERPFICELCGNSYTDIKNLKKHKTKVHSGTDKNADCSVDDHAVSE QDSIQRSPLSETLDVKPSDMTLPLALPLGTEDHHMLLPVTDSQSPTSDTLLRSTVNGYSEPQLIFLQQLY hide sequence

Ensembl Acc Id:

ENSRNOP00000075326 ⟸ ENSRNOT00000078148

Ensembl Acc Id:

ENSRNOP00000010344 ⟸ ENSRNOT00000010344

RefSeq Acc Id:	NP_001386632 ⟸ NM_001399703
- Peptide Label:	isoform 2
- UniProtKB:	A6IHM1 (UniProtKB/TrEMBL), F7F7X6 (UniProtKB/TrEMBL)

Protein Domains

BTB C2H2-type

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2KAA6-F1-model_v2	AlphaFold	A0A0G2KAA6	1-610	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13691277

Promoter ID:

EPDNEW_R1802

Type:

multiple initiation site

Name:

Mynn_1

Description:

myoneurin

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	116,413,886 - 116,413,946	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-53452	BioCyc
Ensembl Genes	ENSRNOG00000027923	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000010344	ENTREZGENE
	ENSRNOT00000010344.7	UniProtKB/TrEMBL
	ENSRNOT00000078148	ENTREZGENE
	ENSRNOT00000078148.2	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
	Potassium Channel Kv1.1, Chain A	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7379696	IMAGE-MGC_LOAD
InterPro	BTB/POZ_dom	UniProtKB/TrEMBL
	GLI_C2H2-zinc-finger	UniProtKB/TrEMBL
	Ikaros_C2H2-ZF	UniProtKB/TrEMBL
	POZ_dom	UniProtKB/TrEMBL
	Znf_C2H2-type	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	ZnFinger_BTB_dom_contain	UniProtKB/TrEMBL
KEGG Report	rno:361924	UniProtKB/TrEMBL
MGC_CLONE	MGC:108895	IMAGE-MGC_LOAD
NCBI Gene	361924	ENTREZGENE
PANTHER	AGAP004733-PA	UniProtKB/TrEMBL
	KLUMPFUSS, ISOFORM B-RELATED	UniProtKB/TrEMBL
	PAIR-RULE PROTEIN ODD-PAIRED	UniProtKB/TrEMBL
	RIKEN CDNA 6720489N17 GENE-RELATED	UniProtKB/TrEMBL
	ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 44 ISOFORM X1	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN ZIC AND GLI	UniProtKB/TrEMBL
	ZNF44 PROTEIN	UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PhenoGen	Mynn	PhenoGen
PROSITE	BTB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000027923	RatGTEx
SMART	BTB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54695	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2KAA6	ENTREZGENE, UniProtKB/TrEMBL
	A6IHL9	ENTREZGENE, UniProtKB/TrEMBL
	A6IHM0	ENTREZGENE, UniProtKB/TrEMBL
	A6IHM1	ENTREZGENE, UniProtKB/TrEMBL
	F7F7X6	ENTREZGENE, UniProtKB/TrEMBL
	Q5FVP1	ENTREZGENE, UniProtKB/TrEMBL
	Q811Y9_RAT	UniProtKB/TrEMBL
	Q811Z0_RAT	UniProtKB/TrEMBL
	Q811Z1_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Mynn	myoneurin	Mynn_predicted	myoneurin (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Mynn_predicted	myoneurin (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar