Gene: Paf1 (PAF1 homolog, Paf1/RNA polymerase II complex component) Rattus norvegicus
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Symbol: Paf1
Name: PAF1 homolog, Paf1/RNA polymerase II complex component
Description: ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); endodermal cell fate commitment (ortholog); histone H2B ubiquitination (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Peroxisome Biogenesis Disorder 3B (ortholog); Peroxisome Biogenesis Disorder 5A (Zellweger) (ortholog); Peroxisome Biogenesis Disorder 5B (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); cell junction (ortholog); cytoplasm (ortholog); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC361531; MGC114568; Paf1, RNA polymerase II associated factor, homolog; Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae); RGD1306219; RNA polymerase II-associated factor 1 homolog; similar to PD2 protein
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0185,362,421 - 85,367,999 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0186,577,751 - 86,583,329 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4183,501,213 - 83,506,791 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1183,579,323 - 83,584,901 (+)NCBI
Celera178,079,922 - 78,085,501 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Paf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306219
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE