Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pabpc4 (poly(A) binding protein, cytoplasmic 4) Rattus norvegicus
Analyze
Symbol: Pabpc4
Name: poly(A) binding protein, cytoplasmic 4
Description: Predicted to have mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Predicted to be involved in myeloid cell development and regulation of mRNA stability. Predicted to localize to several cellular components, including the cytoplasmic stress granule; cytosol; and ribonucleoprotein complex. Orthologous to human PABPC4 (poly(A) binding protein cytoplasmic 4); PARTICIPATES IN mRNA decay pathway; RNA degradation pathway; RNA transport pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC298510; poly A binding protein, cytoplasmic 4; poly(A) binding protein, cytoplasmic 4 (inducible form); polyadenylate-binding protein 4
Orthologs:
Homo sapiens (human) : PABPC4 (poly(A) binding protein cytoplasmic 4)  HGNC  Alliance
Mus musculus (house mouse) : Pabpc4 (poly(A) binding protein, cytoplasmic 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pabpc4 (poly(A) binding protein cytoplasmic 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PABPC4 (poly(A) binding protein cytoplasmic 4)
Canis lupus familiaris (dog) : HEYL (hes related family bHLH transcription factor with YRPW motif like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pabpc4 (poly(A) binding protein cytoplasmic 4)
Sus scrofa (pig) : PABPC4 (poly(A) binding protein cytoplasmic 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05140,978,893 - 140,994,732 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5140,979,435 - 140,994,732 (+)Ensembl
Rnor_5.05144,768,558 - 144,784,395 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45142,599,706 - 142,615,003 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15142,604,839 - 142,620,228 (+)NCBI
Celera5134,102,156 - 134,117,452 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pabpc4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305015
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.