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Gene: Dlg3 (discs large MAGUK scaffold protein 3) Ictidomys tridecemlineatus

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Symbol:

Dlg3

Name:

discs large MAGUK scaffold protein 3

RGD ID:

12648012

Description:

ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN establishment of planar polarity (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal hemophilia A (ortholog); epilepsy (ortholog); FOUND IN dendritic shaft (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

discs large MAGUK scaffold protein 3, transcript variant X1; discs large MAGUK scaffold protein 3, transcript variant X2; discs large MAGUK scaffold protein 3, transcript variant X3; discs large MAGUK scaffold protein 3, transcript variant X4; discs large MAGUK scaffold protein 3, transcript variant X5; discs large MAGUK scaffold protein 3, transcript variant X6; discs large MAGUK scaffold protein 3, transcript variant X7; discs large MAGUK scaffold protein 3, transcript variant X8; disks large homolog 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	47,220,157 - 47,276,307 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936762	982,258 - 1,038,492 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936762	982,331 - 1,038,486 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

autosomal hemophilia A (ISO)

epilepsy (ISO)

factor VIII deficiency (ISO)

genetic disease (ISO)

intellectual disability (ISO)

non-syndromic X-linked intellectual disability (ISO)

non-syndromic X-linked intellectual disability 90 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

X-Linked Intellectual Developmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell-cell adhesion (IEA)

chemical synaptic transmission (IEA)

establishment of planar polarity (IEA,ISO)

establishment or maintenance of epithelial cell apical/basal polarity (IEA,ISO)

receptor clustering (IEA)

receptor localization to synapse (IEA)

regulation of postsynaptic membrane neurotransmitter receptor levels (IEA)

Cellular Component

AMPA glutamate receptor complex (IEA)

basolateral plasma membrane (IEA)

bicellular tight junction (IEA)

cell-cell junction (IEA)

cytoplasm (IEA)

dendritic shaft (ISO)

glutamatergic synapse (IEA,ISO)

growth cone (ISO)

neuromuscular junction (IEA)

neuron projection (IEA)

neuronal cell body (ISO)

plasma membrane (IEA)

postsynaptic density (ISO)

postsynaptic density membrane (IEA)

postsynaptic density, intracellular component (ISO)

synapse (ISO)

Molecular Function

ionotropic glutamate receptor binding (IEA,ISO)

kinase binding (IEA)

PDZ domain binding (ISO)

phosphatase binding (IEA)

protein binding (ISO)

protein domain specific binding (ISO)

protein kinase binding (IEA)

protein phosphatase binding (ISO)

structural constituent of postsynaptic density (ISO)

ubiquitin protein ligase binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Dlg3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	47,220,157 - 47,276,307 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936762	982,258 - 1,038,492 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936762	982,331 - 1,038,486 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DLG3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	70,444,835 - 70,505,490 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	70,444,835 - 70,505,490 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	69,664,685 - 69,725,340 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	69,581,449 - 69,642,062 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	69,447,839 - 69,505,554	NCBI
Celera	X	70,018,031 - 70,078,673 (+)	NCBI		Celera
Cytogenetic Map	X	q13.1	NCBI
HuRef	X	63,486,322 - 63,547,144 (+)	NCBI		HuRef
CHM1_1	X	69,558,605 - 69,619,214 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	68,878,160 - 68,938,810 (+)	NCBI		T2T-CHM13v2.0

Dlg3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	99,811,200 - 99,862,016 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	99,811,328 - 99,862,016 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	100,767,411 - 100,818,410 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	100,767,722 - 100,818,410 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	97,963,062 - 98,013,749 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	96,970,466 - 97,021,127 (+)	NCBI		MGSCv36	mm8
Celera	X	87,686,891 - 87,737,556 (+)	NCBI		Celera
Cytogenetic Map	X	C3	NCBI
cM Map	X	43.72	NCBI

Dlg3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	69,899,694 - 69,951,928 (+)	NCBI		GRCr8
mRatBN7.2	X	65,859,653 - 65,911,887 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	67,343,327 - 67,394,012 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	70,843,724 - 70,894,417 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	68,404,631 - 68,455,321 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	70,596,246 - 70,648,529 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	70,596,576 - 70,648,532 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	88,777,585 - 88,828,504 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	88,851,017 - 88,901,937 (+)	NCBI
Celera	X	66,218,231 - 66,268,819 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

Dlg3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955475	9,992,215 - 10,056,348 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955475	9,992,888 - 10,056,197 (+)	NCBI	ChiLan1.0	ChiLan1.0

DLG3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	70,121,582 - 70,181,058 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	70,125,184 - 70,184,660 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	59,712,755 - 59,773,372 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	69,771,482 - 69,831,376 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	69,771,477 - 69,831,369 (+)	Ensembl	panpan1.1		panPan2

DLG3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	54,886,700 - 54,941,502 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	54,886,389 - 54,939,675 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	45,713,141 - 45,768,580 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	55,853,333 - 55,908,759 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	55,853,116 - 55,908,756 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	53,822,238 - 53,877,672 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	55,153,323 - 55,208,774 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	55,080,264 - 55,135,709 (+)	NCBI		UU_Cfam_GSD_1.0

DLG3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	56,472,307 - 56,527,983 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	56,471,941 - 56,531,481 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	63,666,759 - 63,724,414 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DLG3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	60,290,280 - 60,346,954 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	60,290,630 - 60,346,953 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	2,134,119 - 2,191,196 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dlg3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624903	409,709 - 473,659 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624903	409,721 - 473,422 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005339979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005339980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005339981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005339982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005339983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021719926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000009644 ⟹ ENSSTOP00000008653

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936762	984,439 - 1,038,131 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000030885 ⟹ ENSSTOP00000025548

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936762	982,258 - 1,038,492 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000035577 ⟹ ENSSTOP00000024267

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936762	982,258 - 1,038,492 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000038502 ⟹ ENSSTOP00000029060

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936762	982,331 - 1,038,472 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000038978 ⟹ ENSSTOP00000031716

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936762	982,331 - 1,031,368 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000042068 ⟹ ENSSTOP00000032587

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936762	982,331 - 1,038,472 (-)	Ensembl

RefSeq Acc Id:

XM_005339981 ⟹ XP_005340038

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,220,157 - 47,276,307 (-)	NCBI
SpeTri2.0	NW_004936762	982,331 - 1,038,486 (-)	NCBI

Sequence:

show sequence

GAGATGCTCTTGACTCCACTCAGATCCATCCTGGGGACCAGAGCAGAAGCGGTCCTCGTTGCAC
CCAGTCTCTGCTTGGGCTCCCGCTTCTTCTTTGCCGCTGGGCCTTGGCCCAGAAGCCACGACGG
GCGACACGGAGCCACCAGTGCTAGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGGC
CCCCGGACGCCCTCCCGGCCCCAGGCCCCGCTCTGCCCGGGCGCCCCCACGGGTGCCCCCCCCT
TCCTGGTCCGAGCAGTGTGAGTGTGCCCGGGAGCCCGGCGGCGGCGGCGGTGTGGAAACTGGCG
TGGGCTGGGGGGTCCGAGCTGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTG
CCCCGAGTGCTATGAAGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAACCTCCTGGCTACGGG
GATTGGCAGGTGCCCGACCCCTATGGGCCAGGTGGGGGTAATGGGGCCAGCTCCAGTTATGGGG
GCTACAGCTCGCAGACCCTGCCCTCACAGGCAGGGGCCACCCCCACTCCTCGCACCAAGGCCAA
GCTCATCCCCACCGGCCGGGATGTGGGGCCAGTGCCCCCTAAGCCAGTCCCAGGCAAGAGCACC
CCCAAACTCAACGGCAGTGGCCCCAGCTGGTGGCCTGAATGCACCTGTACCAACCGGGACTGGT
ATGAGCAGGTGAATGGCAGTGATGGCATGTTCAAATATGAGGAGATAGTACTCGAACGGGGCAA
CTCTGGCCTGGGCTTCAGTATTGCAGGTGGCATCGACAACCCCCATGTCCCTGATGACCCTGGA
ATCTTTATTACCAAGATCATCCCTGGTGGAGCAGCTGCCATGGATGGAAGGCTAGGGGTGAATG
ACTGTGTTCTGCGGGTGAATGAGGTGGACGTGTCGGAGGTGGTGCACAGCCGGGCCGTGGAGGC
GTTGAAGGAGGCAGGTCCTGTGGTGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCCGAGACC
ATCATGGAGGTCAACTTGCTCAAAGGGCCCAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTG
GCAACCAGCACATCCCAGGAGACAACAGCATCTACATCACCAAGATCATTGAGGGGGGAGCTGC
TCAGAAGGATGGACGCCTACAGATTGGGGACCGGCTGCTGGCGGTGAACAACACCAATCTACAG
GATGTGAGGCACGAGGAAGCTGTAGCCTCACTGAAGAATACATCTGATATGGTCTATCTGAAAG
TGGCTAAGCCAGGCAGTCTCCACCTCAACGACATGTACGCTCCCCCTGACTACGCCAGCACTTT
TACCGCCTTGGCTGACAACCACATAAGCCATAATTCCAGCCTGGGTTATCTCGGGGCGGTGGAG
AGCAAGGTCAGCTACCCGGCTCCTCCTCAGGTCCCCCCCACTCGCTACTCTCCTATCCCCAGGC
ACATGCTGGCCGAGGAGGACTTCACCAGAGAGCCCCGCAAGATCATCCTACACAAAGGCTCTAC
AGGCCTAGGTTTCAACATCGTAGGAGGAGAGGATGGAGAAGGCATTTTTGTCTCCTTCATCCTG
GCAGGAGGCCCAGCCGACCTGAGTGGGGAGCTGCGCAGGGGAGACCGGATCTTATCGGTAAATG
GAGTGAACCTGAGGAATGCAACTCATGAGCAGGCTGCAGCTGCTCTGAAACGGGCTGGCCAGTC
AGTCACCATTGTGGCCCAGTACAGACCTGAAGAGTACAGTCGCTTTGAATCGAAGATACATGAC
TTGCGAGAACAAATGATGAACAGCAGCATGAGTTCTGGGTCAGGGTCCCTCCGAACAAGTGAGA
AGAGGTCCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGGGACAGCTGCCTGCCAAG
CCAGGGGCTTAGTTTTTCTTATGGTGACATTCTACATGTCATTAATGCCTCTGATGATGAGTGG
TGGCAGGCAAGGCTGGTGACCCCACATGGAGAGAGTGAGCAGATTGGCGTAATCCCCAGTAAGA
AGAGAGTGGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAGTTCCATGCCAGGACGGGGAT
GATTGAGTCTAATAGGGACTTCCCTGGGTTAAGTGACGATTATTATGGAGCAAAGAACCTGAAA
GGACAAGAAGATGCTATTTTGTCATATGAGCCAGTGACAAGGCAAGAAATTCACTACGCAAGGC
CTGTGATCATCTTGGGTCCAATGAAAGACCGAGTCAACGATGACCTGATCTCTGAGTTTCCACA
TAAATTTGGATCCTGTGTGCCACATACCACCCGGCCTCGGCGTGATAATGAGGTGGATGGACAG
GACTACCACTTTGTGGTGTCCCGAGAACAAATGGAAAAGGATATTCAGGACAACAAGTTCATTG
AGGCGGGCCAGTTCAACGATAATCTGTATGGAACCAGCATCCAGTCAGTGCGGGCAGTTGCAGA
GAGGGGCAAACACTGCATCTTAGATGTTTCCGGCAATGCCATCAAGAGACTGCAGCAAGCACAA
CTTTACCCCATTGCCATTTTCATCAAGCCCAAGTCCATTGAAGCACTTATGGAAATGAATCGAC
GGCAGACATATGAACAAGCAAATAAGATCTATGACAAAGCCATGAAACTGGAGCAGGAGTTTGG
AGAATACTTTACAGCCATTGTACAGGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAA
ATCATTGAGGACCAGTCTGGGCACTACATTTGGGTCCCATCCCCTGAAAAACTCTGAAGAATCC
CCTCCAACCATTCTCTTGTGAACAGAAGAAATCAAGTCCCTCTTCCCTCCTCCCTCTTCATTCC
TGTCCCCATGGGGAGAACAAATGACTACTGTTCTTGTCCCCTTTTTTAGATATGTCAAAAAAAT
TGAGTTTTCTAGTCTTCTTTTTTTTTAATTTTTGTTTTGTTTTCATTTATTTTTTGGGATGATG
CCATCTCACTCATCATGTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAGCACTATCACAGG
TGCAAATCCATCAGAGCCATTGTTTTCATAAAAACCAAGCAGAAGCGAAGAGAAGAGAGGAGGA
CTGATGGAAAGACAGACTCTGGACAGCTGCACGGCTTGTGAAGTGAGCTAAATGCAGCACATGA
TGAGGTGCTCCTGGGCACTTCTCCCCATCTGTACTGCTGTCTTGCAGCTCTGAACAGTGCAACG
TAATGGCAACAGGAAGTATCTTATTTATATATAGATATATATATGTAATTTATATAAAATATAT
AGAAATTATTATATATATATATTATACACTCTCCTATAATATATATATATATATATTCACACAC
ATTGGGACTAGAAAATCTATGGAGACTTCGTCAATGGTACTATGTTATTAGAGAAACGCTTTAA
TTTTCATATTCCAATCAGATGGCATCTTATATCCCACCTGGTTGAGAAGGGTTTGAGAATGGTA
GAAAGTGCTGTACGGAGGGTATGCACACTTGGTCATTCTCTTGAGAGCTAAGGCTTACTCTTGG
CAGGGTCAGCCTGAGGCCTGAGAGAAAGGGCTTTGGCCTGGGAGCGTGAAGTTTGGAGACTTGA
CCTGAGAGCAGCTGCTGCCCTGAGGTGCAGTCAGTCCTGTGTGCGGAGAGAGAATGGCTAATGA
TGCTCCATATAAAATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTT
TTGTTCATTTTTAAGCTGCTGTTAAACCAAAATCATGTTGTGCTACTGTGTCAGCCTTTTCATT
ATTCCAAATTTTACTTTTACTATTTAAGTGAATGCGTAGAATCCAATTTGCCAATGTTCTAAAG
GCTTCCAAGCTTCTGAAGGAGCCAGGCCGTGGCCGTCCAGTCAGCAGAGGGAAAGCGGGGCCCA
GTGGGCTGGGGAGGAGCTGGGCCCCCGCACTGCCACACTGGCCCTTCACTTGCCTGCCTAGGAT
ATGCTGGACTCTAGCTAGGGTTCCTTCATGGGGCCACTGACAGGGACAGGGAGGTGCTTGCCTT
CCAGTTCTCTGCTGGGATAGTAGAACAGCATTTGGCTTGGCCAGCCATGTAGTGAGTTTGATTT
GGGTATTTTTTGCAGCTGCTCCATATGCCCTACCCCAGCCCCCTCACCAACAGCTGGTAGCTTA
CTGTTTCTTCAAGAAGAAAGTAGAATTTAATGCTGTAAATTTGAGCTGTAGAGCTAAGATTCAC
TTACTGGTGAGCCATGAGACCTTGTTGCTTTCTCCCAGAGTCTGATGGCAGTGACTGTGGTCCA
GGGAGTTCTCTGCCCACCACCAATGCGGGCAGCAGGTGTGGCCCAGCCTTCCCCCCTCCCCACT
GTGCTCCTTTGAAGCCAATGTGCCTCCCTCACCTCCATGCTGGAGGGAAGACGCAGGGGAGAAT
ATAGAAATGCTTGGCCCTAAAGTTGAGCCCACTGGATTAGGACCAGTGCGAATGACACAAGTGT
TGAAGATGCTTTAAGCACTACCAGCCAAATTCAGGAAATCTGTTCACAGTTATCCTACCAGCAT
ACTGAGGCTAACTGTAAAGTGTGGGGCCCAGAATGAGGGTAATGAAAGGGCAGCAGCTTTCCCT
TGGGCAGTACACTGGATTGAAGGCAAAGAGGGATGAAGTTATGGCCATTGTGCCTCTGATGTGG
GGGGTGAGCAGGGAGTGTTGATTCTGTGATGGTAACTGACATGTCTGAATGATGCTGGACCCTC
CCTCCCTCCCTCCTGGGGAAGAAAAGCGAAGATTCAAAGTAAGCATGACACTAGTTGGTTTACC
AGTGTTCCTTCCAAGGAGACATATATTTTTTAATAAACGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_005339982 ⟹ XP_005340039

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,220,157 - 47,269,164 (-)	NCBI
SpeTri2.0	NW_004936762	982,331 - 1,031,415 (-)	NCBI

Sequence:

show sequence

GATCCGAAAGTGCAGATAAAGGGTGGGGTGGAGCGTTTAGGGGCTGAGGAGGTGGGTGCTGTGG
GTTTTCCTGCCTTGACATAGTTTGCACCCCCGCCCCCCCTGTGCTCCAGCCACTCCAAATTATT
GAAGAAAGCAGTTCAGCCAGTGGGGTTGGGGGGATTCTGAGAGGCCAGCAGGCCCGGTGGCCTC
ACGGGGAATGGCCCCGCCCCACCGTGGCTGCGGCTGAGCCCCGCGGTGGAACTGGTCCGGCCAG
CCGGGATTCCGGGGGACAGGTTTGCGGGGTGGGGCCTGGTAGGCTGCTGGGCAGACGGCGGTAG
AGCCGGAAGGGTAGGCAGACAGGGGGAGAGCCAGAGGAGCCATGGAGAGGGCCCGCAAGTTCTC
AGGCTCCGGCTTGGCCCTGGGCTTGGGCTCGGCCTCAGCTTCGGCCTGGAGGAGGGCTTCGCAG
AGGTGGGCCTGGCCGCTCCGCTCCCTGCGGCCTGGAGGGGATGCCAGAGAGCCCCGCAAGATCA
TCCTACACAAAGGCTCTACAGGCCTAGGTTTCAACATCGTAGGAGGAGAGGATGGAGAAGGCAT
TTTTGTCTCCTTCATCCTGGCAGGAGGCCCAGCCGACCTGAGTGGGGAGCTGCGCAGGGGAGAC
CGGATCTTATCGGTAAATGGAGTGAACCTGAGGAATGCAACTCATGAGCAGGCTGCAGCTGCTC
TGAAACGGGCTGGCCAGTCAGTCACCATTGTGGCCCAGTACAGACCTGAAGAGTACAGTCGCTT
TGAATCGAAGATACATGACTTGCGAGAACAAATGATGAACAGCAGCATGAGTTCTGGGTCAGGG
TCCCTCCGAACAAGTGAGAAGAGGTCCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTC
GGGACAGCTGCCTGCCAAGCCAGGGGCTTAGTTTTTCTTATGGTGACATTCTACATGTCATTAA
TGCCTCTGATGATGAGTGGTGGCAGGCAAGGCTGGTGACCCCACATGGAGAGAGTGAGCAGATT
GGCGTAATCCCCAGTAAGAAGAGAGTGGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAGT
TCCATGCCAGGACGGGGATGATTGAGTCTAATAGGTCGATCAAAACGAAACGTAAAAAGAGTTT
CCGCCTCTCTCGAAAGTTTCCATTTTACAAGAGCAAAGAAAACATGGCCCAGGAGAGCAGCATA
CAGGAACAGGGAGTGACATCCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGAAGATG
CTATTTTGTCATATGAGCCAGTGACAAGGCAAGAAATTCACTACGCAAGGCCTGTGATCATCTT
GGGTCCAATGAAAGACCGAGTCAACGATGACCTGATCTCTGAGTTTCCACATAAATTTGGATCC
TGTGTGCCACATACCACCCGGCCTCGGCGTGATAATGAGGTGGATGGACAGGACTACCACTTTG
TGGTGTCCCGAGAACAAATGGAAAAGGATATTCAGGACAACAAGTTCATTGAGGCGGGCCAGTT
CAACGATAATCTGTATGGAACCAGCATCCAGTCAGTGCGGGCAGTTGCAGAGAGGGGCAAACAC
TGCATCTTAGATGTTTCCGGCAATGCCATCAAGAGACTGCAGCAAGCACAACTTTACCCCATTG
CCATTTTCATCAAGCCCAAGTCCATTGAAGCACTTATGGAAATGAATCGACGGCAGACATATGA
ACAAGCAAATAAGATCTATGACAAAGCCATGAAACTGGAGCAGGAGTTTGGAGAATACTTTACA
GCCATTGTACAGGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAAATCATTGAGGACC
AGTCTGGGCACTACATTTGGGTCCCATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACCATTC
TCTTGTGAACAGAAGAAATCAAGTCCCTCTTCCCTCCTCCCTCTTCATTCCTGTCCCCATGGGG
AGAACAAATGACTACTGTTCTTGTCCCCTTTTTTAGATATGTCAAAAAAATTGAGTTTTCTAGT
CTTCTTTTTTTTTAATTTTTGTTTTGTTTTCATTTATTTTTTGGGATGATGCCATCTCACTCAT
CATGTGACTGTGCCCATTCCTGCATGGACCTTTCCCAAGCACTATCACAGGTGCAAATCCATCA
GAGCCATTGTTTTCATAAAAACCAAGCAGAAGCGAAGAGAAGAGAGGAGGACTGATGGAAAGAC
AGACTCTGGACAGCTGCACGGCTTGTGAAGTGAGCTAAATGCAGCACATGATGAGGTGCTCCTG
GGCACTTCTCCCCATCTGTACTGCTGTCTTGCAGCTCTGAACAGTGCAACGTAATGGCAACAGG
AAGTATCTTATTTATATATAGATATATATATGTAATTTATATAAAATATATAGAAATTATTATA
TATATATATTATACACTCTCCTATAATATATATATATATATATTCACACACATTGGGACTAGAA
AATCTATGGAGACTTCGTCAATGGTACTATGTTATTAGAGAAACGCTTTAATTTTCATATTCCA
ATCAGATGGCATCTTATATCCCACCTGGTTGAGAAGGGTTTGAGAATGGTAGAAAGTGCTGTAC
GGAGGGTATGCACACTTGGTCATTCTCTTGAGAGCTAAGGCTTACTCTTGGCAGGGTCAGCCTG
AGGCCTGAGAGAAAGGGCTTTGGCCTGGGAGCGTGAAGTTTGGAGACTTGACCTGAGAGCAGCT
GCTGCCCTGAGGTGCAGTCAGTCCTGTGTGCGGAGAGAGAATGGCTAATGATGCTCCATATAAA
ATTGCCTATTGTTTTATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTTTTGTTCATTTTTA
AGCTGCTGTTAAACCAAAATCATGTTGTGCTACTGTGTCAGCCTTTTCATTATTCCAAATTTTA
CTTTTACTATTTAAGTGAATGCGTAGAATCCAATTTGCCAATGTTCTAAAGGCTTCCAAGCTTC
TGAAGGAGCCAGGCCGTGGCCGTCCAGTCAGCAGAGGGAAAGCGGGGCCCAGTGGGCTGGGGAG
GAGCTGGGCCCCCGCACTGCCACACTGGCCCTTCACTTGCCTGCCTAGGATATGCTGGACTCTA
GCTAGGGTTCCTTCATGGGGCCACTGACAGGGACAGGGAGGTGCTTGCCTTCCAGTTCTCTGCT
GGGATAGTAGAACAGCATTTGGCTTGGCCAGCCATGTAGTGAGTTTGATTTGGGTATTTTTTGC
AGCTGCTCCATATGCCCTACCCCAGCCCCCTCACCAACAGCTGGTAGCTTACTGTTTCTTCAAG
AAGAAAGTAGAATTTAATGCTGTAAATTTGAGCTGTAGAGCTAAGATTCACTTACTGGTGAGCC
ATGAGACCTTGTTGCTTTCTCCCAGAGTCTGATGGCAGTGACTGTGGTCCAGGGAGTTCTCTGC
CCACCACCAATGCGGGCAGCAGGTGTGGCCCAGCCTTCCCCCCTCCCCACTGTGCTCCTTTGAA
GCCAATGTGCCTCCCTCACCTCCATGCTGGAGGGAAGACGCAGGGGAGAATATAGAAATGCTTG
GCCCTAAAGTTGAGCCCACTGGATTAGGACCAGTGCGAATGACACAAGTGTTGAAGATGCTTTA
AGCACTACCAGCCAAATTCAGGAAATCTGTTCACAGTTATCCTACCAGCATACTGAGGCTAACT
GTAAAGTGTGGGGCCCAGAATGAGGGTAATGAAAGGGCAGCAGCTTTCCCTTGGGCAGTACACT
GGATTGAAGGCAAAGAGGGATGAAGTTATGGCCATTGTGCCTCTGATGTGGGGGGTGAGCAGGG
AGTGTTGATTCTGTGATGGTAACTGACATGTCTGAATGATGCTGGACCCTCCCTCCCTCCCTCC
TGGGGAAGAAAAGCGAAGATTCAAAGTAAGCATGACACTAGTTGGTTTACCAGTGTTCCTTCCA
AGGAGACATATATTTTTTAATAAACGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_005339983 ⟹ XP_005340040

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,220,157 - 47,266,428 (-)	NCBI
SpeTri2.0	NW_004936762	982,331 - 1,028,602 (-)	NCBI

Sequence:

show sequence

TGCGCGCCTCAGGCGTCTCCTCCTCCTTCTTCCCCTCCCCCTCCTTCTCCCTCTTTCTCTCTCC
CCTCCTCCCGCGCGCCCCGCTTTGTGTCCGTGGTCTCCCGCGCGGGACGGAGGGACTGGCTGGA
GCTGGTTCTTTCTCAGCACTAGACCTGGACTCCGACCCGGCGCCAGAGTACAGTCGCTTTGAAT
CGAAGATACATGACTTGCGAGAACAAATGATGAACAGCAGCATGAGTTCTGGGTCAGGGTCCCT
CCGAACAAGTGAGAAGAGGTCCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGGGAC
AGCTGCCTGCCAAGCCAGGGGCTTAGTTTTTCTTATGGTGACATTCTACATGTCATTAATGCCT
CTGATGATGAGTGGTGGCAGGCAAGGCTGGTGACCCCACATGGAGAGAGTGAGCAGATTGGCGT
AATCCCCAGTAAGAAGAGAGTGGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAGTTCCAT
GCCAGGACGGGGATGATTGAGTCTAATAGGTCGATCAAAACGAAACGTAAAAAGAGTTTCCGCC
TCTCTCGAAAGTTTCCATTTTACAAGAGCAAAGAAAACATGGCCCAGGAGAGCAGCATACAGGA
ACAGGGAGTGACATCCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGAAGATGCTATT
TTGTCATATGAGCCAGTGACAAGGCAAGAAATTCACTACGCAAGGCCTGTGATCATCTTGGGTC
CAATGAAAGACCGAGTCAACGATGACCTGATCTCTGAGTTTCCACATAAATTTGGATCCTGTGT
GCCACATACCACCCGGCCTCGGCGTGATAATGAGGTGGATGGACAGGACTACCACTTTGTGGTG
TCCCGAGAACAAATGGAAAAGGATATTCAGGACAACAAGTTCATTGAGGCGGGCCAGTTCAACG
ATAATCTGTATGGAACCAGCATCCAGTCAGTGCGGGCAGTTGCAGAGAGGGGCAAACACTGCAT
CTTAGATGTTTCCGGCAATGCCATCAAGAGACTGCAGCAAGCACAACTTTACCCCATTGCCATT
TTCATCAAGCCCAAGTCCATTGAAGCACTTATGGAAATGAATCGACGGCAGACATATGAACAAG
CAAATAAGATCTATGACAAAGCCATGAAACTGGAGCAGGAGTTTGGAGAATACTTTACAGCCAT
TGTACAGGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAAATCATTGAGGACCAGTCT
GGGCACTACATTTGGGTCCCATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTG
TGAACAGAAGAAATCAAGTCCCTCTTCCCTCCTCCCTCTTCATTCCTGTCCCCATGGGGAGAAC
AAATGACTACTGTTCTTGTCCCCTTTTTTAGATATGTCAAAAAAATTGAGTTTTCTAGTCTTCT
TTTTTTTTAATTTTTGTTTTGTTTTCATTTATTTTTTGGGATGATGCCATCTCACTCATCATGT
GACTGTGCCCATTCCTGCATGGACCTTTCCCAAGCACTATCACAGGTGCAAATCCATCAGAGCC
ATTGTTTTCATAAAAACCAAGCAGAAGCGAAGAGAAGAGAGGAGGACTGATGGAAAGACAGACT
CTGGACAGCTGCACGGCTTGTGAAGTGAGCTAAATGCAGCACATGATGAGGTGCTCCTGGGCAC
TTCTCCCCATCTGTACTGCTGTCTTGCAGCTCTGAACAGTGCAACGTAATGGCAACAGGAAGTA
TCTTATTTATATATAGATATATATATGTAATTTATATAAAATATATAGAAATTATTATATATAT
ATATTATACACTCTCCTATAATATATATATATATATATTCACACACATTGGGACTAGAAAATCT
ATGGAGACTTCGTCAATGGTACTATGTTATTAGAGAAACGCTTTAATTTTCATATTCCAATCAG
ATGGCATCTTATATCCCACCTGGTTGAGAAGGGTTTGAGAATGGTAGAAAGTGCTGTACGGAGG
GTATGCACACTTGGTCATTCTCTTGAGAGCTAAGGCTTACTCTTGGCAGGGTCAGCCTGAGGCC
TGAGAGAAAGGGCTTTGGCCTGGGAGCGTGAAGTTTGGAGACTTGACCTGAGAGCAGCTGCTGC
CCTGAGGTGCAGTCAGTCCTGTGTGCGGAGAGAGAATGGCTAATGATGCTCCATATAAAATTGC
CTATTGTTTTATGCCACCTGATGTGTCTGCATGAGAGGTTTCCTTTTTGTTCATTTTTAAGCTG
CTGTTAAACCAAAATCATGTTGTGCTACTGTGTCAGCCTTTTCATTATTCCAAATTTTACTTTT
ACTATTTAAGTGAATGCGTAGAATCCAATTTGCCAATGTTCTAAAGGCTTCCAAGCTTCTGAAG
GAGCCAGGCCGTGGCCGTCCAGTCAGCAGAGGGAAAGCGGGGCCCAGTGGGCTGGGGAGGAGCT
GGGCCCCCGCACTGCCACACTGGCCCTTCACTTGCCTGCCTAGGATATGCTGGACTCTAGCTAG
GGTTCCTTCATGGGGCCACTGACAGGGACAGGGAGGTGCTTGCCTTCCAGTTCTCTGCTGGGAT
AGTAGAACAGCATTTGGCTTGGCCAGCCATGTAGTGAGTTTGATTTGGGTATTTTTTGCAGCTG
CTCCATATGCCCTACCCCAGCCCCCTCACCAACAGCTGGTAGCTTACTGTTTCTTCAAGAAGAA
AGTAGAATTTAATGCTGTAAATTTGAGCTGTAGAGCTAAGATTCACTTACTGGTGAGCCATGAG
ACCTTGTTGCTTTCTCCCAGAGTCTGATGGCAGTGACTGTGGTCCAGGGAGTTCTCTGCCCACC
ACCAATGCGGGCAGCAGGTGTGGCCCAGCCTTCCCCCCTCCCCACTGTGCTCCTTTGAAGCCAA
TGTGCCTCCCTCACCTCCATGCTGGAGGGAAGACGCAGGGGAGAATATAGAAATGCTTGGCCCT
AAAGTTGAGCCCACTGGATTAGGACCAGTGCGAATGACACAAGTGTTGAAGATGCTTTAAGCAC
TACCAGCCAAATTCAGGAAATCTGTTCACAGTTATCCTACCAGCATACTGAGGCTAACTGTAAA
GTGTGGGGCCCAGAATGAGGGTAATGAAAGGGCAGCAGCTTTCCCTTGGGCAGTACACTGGATT
GAAGGCAAAGAGGGATGAAGTTATGGCCATTGTGCCTCTGATGTGGGGGGTGAGCAGGGAGTGT
TGATTCTGTGATGGTAACTGACATGTCTGAATGATGCTGGACCCTCCCTCCCTCCCTCCTGGGG
AAGAAAAGCGAAGATTCAAAGTAAGCATGACACTAGTTGGTTTACCAGTGTTCCTTCCAAGGAG
ACATATATTTTTTAATAAACGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_021719926 ⟹ XP_021575601

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,220,157 - 47,276,307 (-)	NCBI
SpeTri2.0	NW_004936762	982,331 - 1,038,486 (-)	NCBI

Sequence:

show sequence

GAGATGCTCTTGACTCCACTCAGATCCATCCTGGGGACCAGAGCAGAAGCGGTCCTCGTTGCAC
CCAGTCTCTGCTTGGGCTCCCGCTTCTTCTTTGCCGCTGGGCCTTGGCCCAGAAGCCACGACGG
GCGACACGGAGCCACCAGTGCTAGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGGC
CCCCGGACGCCCTCCCGGCCCCAGGCCCCGCTCTGCCCGGGCGCCCCCACGGGTGCCCCCCCCT
TCCTGGTCCGAGCAGTGTGAGTGTGCCCGGGAGCCCGGCGGCGGCGGCGGTGTGGAAACTGGCG
TGGGCTGGGGGGTCCGAGCTGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTG
CCCCGAGTGCTATGAAGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAACCTCCTGGCTACGGG
GATTGGCAGGTGCCCGACCCCTATGGGCCAGGTGGGGGTAATGGGGCCAGCTCCAGTTATGGGG
GCTACAGCTCGCAGACCCTGCCCTCACAGGCAGGGGCCACCCCCACTCCTCGCACCAAGGCCAA
GCTCATCCCCACCGGCCGGGATGTGGGGCCAGTGCCCCCTAAGCCAGTCCCAGGCAAGAGCACC
CCCAAACTCAACGGCAGTGGCCCCAGCTGGTGGCCTGAATGCACCTGTACCAACCGGGACTGGT
ATGAGCAGGTGAATGGCAGTGATGGCATGTTCAAATATGAGGAGATAGTACTCGAACGGGGCAA
CTCTGGCCTGGGCTTCAGTATTGCAGGTGGCATCGACAACCCCCATGTCCCTGATGACCCTGGA
ATCTTTATTACCAAGATCATCCCTGGTGGAGCAGCTGCCATGGATGGAAGGCTAGGGGTGAATG
ACTGTGTTCTGCGGGTGAATGAGGTGGACGTGTCGGAGGTGGTGCACAGCCGGGCCGTGGAGGC
GTTGAAGGAGGCAGGTCCTGTGGTGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCCGAGACC
ATCATGGAGGTCAACTTGCTCAAAGGGCCCAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTG
GCAACCAGCACATCCCAGGAGACAACAGCATCTACATCACCAAGATCATTGAGGGGGGAGCTGC
TCAGAAGGATGGACGCCTACAGATTGGGGACCGGCTGCTGGCGGTGAACAACACCAATCTACAG
GATGTGAGGCACGAGGAAGCTGTAGCCTCACTGAAGAATACATCTGATATGGTCTATCTGAAAG
TGGCTAAGCCAGGCAGTCTCCACCTCAACGACATGTACGCTCCCCCTGACTACGCCAGCACTTT
TACCGCCTTGGCTGACAACCACATAAGCCATAATTCCAGCCTGGGTTATCTCGGGGCGGTGGAG
AGCAAGGTCAGCTACCCGGCTCCTCCTCAGGTCCCCCCCACTCGCTACTCTCCTATCCCCAGGC
ACATGCTGGCCGAGGAGGACTTCACCAGAGAGCCCCGCAAGATCATCCTACACAAAGGCTCTAC
AGGCCTAGGTTTCAACATCGTAGGAGGAGAGGATGGAGAAGGCATTTTTGTCTCCTTCATCCTG
GCAGGAGGCCCAGCCGACCTGAGTGGGGAGCTGCGCAGGGGAGACCGGATCTTATCGGTAAATG
GAGTGAACCTGAGGAATGCAACTCATGAGCAGGCTGCAGCTGCTCTGAAACGGGCTGGCCAGTC
AGTCACCATTGTGGCCCAGTACAGACCTGAAGAGTACAGTCGCTTTGAATCGAAGATACATGAC
TTGCGAGAACAAATGATGAACAGCAGCATGAGTTCTGGGTCAGGGTCCCTCCGAACAAGTGAGA
AGAGGTCCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGGGACAGCTGCCTGCCAAG
CCAGGGGCTTAGTTTTTCTTATGGTGACATTCTACATGTCATTAATGCCTCTGATGATGAGTGG
TGGCAGGCAAGGCTGGTGACCCCACATGGAGAGAGTGAGCAGATTGGCGTAATCCCCAGTAAGA
AGAGAGTGGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAGTTCCATGCCAGGACGGGGAT
GATTGAGTCTAATAGGTCGATCAAAACGAAACGTAAAAAGAGTTTCCGCCTCTCTCGAAAGTTT
CCATTTTACAAGAGCAAAGAAAACATGGCCCAGGAGAGCAGCATACAGGAACAGGGAGTGACAT
CCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGAAGATGCTATTTTGTCATATGAGCC
AGTGACAAGGCAAGAAATTCACTACGCAAGGCCTGTGATCATCTTGGGTCCAATGAAAGACCGA
GTCAACGATGACCTGATCTCTGAGTTTCCACATAAATTTGGATCCTGTGTGCCACATACCACCC
GGCCTCGGCGTGATAATGAGGTGGATGGACAGGACTACCACTTTGTGGTGTCCCGAGAACAAAT
GGAAAAGGATATTCAGGACAACAAGTTCATTGAGGCGGGCCAGTTCAACGATAATCTGTATGGA
ACCAGCATCCAGTCAGTGCGGGCAGTTGCAGAGAGGGGCAAACACTGCATCTTAGATGTTTCCG
GCAATGCCATCAAGAGACTGCAGCAAGCACAACTTTACCCCATTGCCATTTTCATCAAGCCCAA
GTCCATTGAAGCACTTATGGAAATGAATCGACGGCAGACATATGAACAAGCAAATAAGATCTAT
GACAAAGCCATGAAACTGGAGCAGGAGTTTGGAGAATACTTTACAGCCATTGTACAGGGTGACT
CACTGGAAGAGATTTATAACAAAATCAAACAAATCATTGAGGACCAGTCTGGGCACTACATTTG
GGTCCCATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGAACAGAAGAAAT
CAAGTCCCTCTTCCCTCCTCCCTCTTCATTCCTGTCCCCATGGGGAGAACAAATGACTACTGTT
CTTGTCCCCTTTTTTAGATATGTCAAAAAAATTGAGTTTTCTAGTCTTCTTTTTTTTTAATTTT
TGTTTTGTTTTCATTTATTTTTTGGGATGATGCCATCTCACTCATCATGTGACTGTGCCCATTC
CTGCATGGACCTTTCCCAAGCACTATCACAGGTGCAAATCCATCAGAGCCATTGTTTTCATAAA
AACCAAGCAGAAGCGAAGAGAAGAGAGGAGGACTGATGGAAAGACAGACTCTGGACAGCTGCAC
GGCTTGTGAAGTGAGCTAAATGCAGCACATGATGAGGTGCTCCTGGGCACTTCTCCCCATCTGT
ACTGCTGTCTTGCAGCTCTGAACAGTGCAACGTAATGGCAACAGGAAGTATCTTATTTATATAT
AGATATATATATGTAATTTATATAAAATATATAGAAATTATTATATATATATATTATACACTCT
CCTATAATATATATATATATATATTCACACACATTGGGACTAGAAAATCTATGGAGACTTCGTC
AATGGTACTATGTTATTAGAGAAACGCTTTAATTTTCATATTCCAATCAGATGGCATCTTATAT
CCCACCTGGTTGAGAAGGGTTTGAGAATGGTAGAAAGTGCTGTACGGAGGGTATGCACACTTGG
TCATTCTCTTGAGAGCTAAGGCTTACTCTTGGCAGGGTCAGCCTGAGGCCTGAGAGAAAGGGCT
TTGGCCTGGGAGCGTGAAGTTTGGAGACTTGACCTGAGAGCAGCTGCTGCCCTGAGGTGCAGTC
AGTCCTGTGTGCGGAGAGAGAATGGCTAATGATGCTCCATATAAAATTGCCTATTGTTTTATGC
CACCTGATGTGTCTGCATGAGAGGTTTCCTTTTTGTTCATTTTTAAGCTGCTGTTAAACCAAAA
TCATGTTGTGCTACTGTGTCAGCCTTTTCATTATTCCAAATTTTACTTTTACTATTTAAGTGAA
TGCGTAGAATCCAATTTGCCAATGTTCTAAAGGCTTCCAAGCTTCTGAAGGAGCCAGGCCGTGG
CCGTCCAGTCAGCAGAGGGAAAGCGGGGCCCAGTGGGCTGGGGAGGAGCTGGGCCCCCGCACTG
CCACACTGGCCCTTCACTTGCCTGCCTAGGATATGCTGGACTCTAGCTAGGGTTCCTTCATGGG
GCCACTGACAGGGACAGGGAGGTGCTTGCCTTCCAGTTCTCTGCTGGGATAGTAGAACAGCATT
TGGCTTGGCCAGCCATGTAGTGAGTTTGATTTGGGTATTTTTTGCAGCTGCTCCATATGCCCTA
CCCCAGCCCCCTCACCAACAGCTGGTAGCTTACTGTTTCTTCAAGAAGAAAGTAGAATTTAATG
CTGTAAATTTGAGCTGTAGAGCTAAGATTCACTTACTGGTGAGCCATGAGACCTTGTTGCTTTC
TCCCAGAGTCTGATGGCAGTGACTGTGGTCCAGGGAGTTCTCTGCCCACCACCAATGCGGGCAG
CAGGTGTGGCCCAGCCTTCCCCCCTCCCCACTGTGCTCCTTTGAAGCCAATGTGCCTCCCTCAC
CTCCATGCTGGAGGGAAGACGCAGGGGAGAATATAGAAATGCTTGGCCCTAAAGTTGAGCCCAC
TGGATTAGGACCAGTGCGAATGACACAAGTGTTGAAGATGCTTTAAGCACTACCAGCCAAATTC
AGGAAATCTGTTCACAGTTATCCTACCAGCATACTGAGGCTAACTGTAAAGTGTGGGGCCCAGA
ATGAGGGTAATGAAAGGGCAGCAGCTTTCCCTTGGGCAGTACACTGGATTGAAGGCAAAGAGGG
ATGAAGTTATGGCCATTGTGCCTCTGATGTGGGGGGTGAGCAGGGAGTGTTGATTCTGTGATGG
TAACTGACATGTCTGAATGATGCTGGACCCTCCCTCCCTCCCTCCTGGGGAAGAAAAGCGAAGA
TTCAAAGTAAGCATGACACTAGTTGGTTTACCAGTGTTCCTTCCAAGGAGACATATATTTTTTA
ATAAACGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_040282010 ⟹ XP_040137944

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,220,157 - 47,276,307 (-)	NCBI

RefSeq Acc Id:

XM_040282015 ⟹ XP_040137949

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,220,157 - 47,276,307 (-)	NCBI

RefSeq Acc Id:

XM_040282024 ⟹ XP_040137958

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,220,157 - 47,272,561 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005340038	(Get FASTA)	NCBI Sequence Viewer
	XP_005340039	(Get FASTA)	NCBI Sequence Viewer
	XP_005340040	(Get FASTA)	NCBI Sequence Viewer
	XP_021575601	(Get FASTA)	NCBI Sequence Viewer
	XP_040137944	(Get FASTA)	NCBI Sequence Viewer
	XP_040137949	(Get FASTA)	NCBI Sequence Viewer
	XP_040137958	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000008653.3
	ENSSTOP00000024267.1
	ENSSTOP00000025548.1
	ENSSTOP00000029060.1
	ENSSTOP00000031716.1
	ENSSTOP00000032587.1
GenBank Protein	KAG3272373	(Get FASTA)	NCBI Sequence Viewer
	KAG3272374	(Get FASTA)	NCBI Sequence Viewer
	KAG3272375	(Get FASTA)	NCBI Sequence Viewer
	KAG3272376	(Get FASTA)	NCBI Sequence Viewer
	KAG3272377	(Get FASTA)	NCBI Sequence Viewer
	KAG3272378	(Get FASTA)	NCBI Sequence Viewer
	KAG3272379	(Get FASTA)	NCBI Sequence Viewer
	KAG3272380	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005340039 ⟸ XM_005339982
- Peptide Label:	isoform X6
- UniProtKB:	A0A287DDX6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERARKFSGSGLALGLGSASASAWRRASQRWAWPLRSLRPGGDAREPRKIILHKGSTGLGFNIV GGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQY RPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSY GDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSI KTKRKKSFRLSRKFPFYKSKENMAQESSIQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIH YARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDN KFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALME MNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:

XP_005340040 ⟸ XM_005339983

- Peptide Label:

isoform X7

- Sequence:

show sequence

MMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQAR
LVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYK
SKENMAQESSIQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDD
LISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQ
SVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAM
KLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL

hide sequence

RefSeq Acc Id:	XP_005340038 ⟸ XM_005339981
- Peptide Label:	isoform X4
- UniProtKB:	I3MDY4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASSSYGGYSSQTLPSQAG ATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFK YEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVS EVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIY ITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSLHLNDM YAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPTRYSPIPRHMLAEEDFTREP RKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQA AAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDY DRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLK TVKFHARTGMIESNRDFPGLSDDYYGAKNLKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRV NDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGT SIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYD KAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:	XP_021575601 ⟸ XM_021719926
- Peptide Label:	isoform X1
- UniProtKB:	A0A287CW97 (UniProtKB/TrEMBL), A0A287CSL6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASSSYGGYSSQTLPSQAG ATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFK YEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVS EVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIY ITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSLHLNDM YAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPTRYSPIPRHMLAEEDFTREP RKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQA AAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDY DRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLK TVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQESSIQEQGVTSNTSDSESSSKG QEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQD YHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQL YPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQI IEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:	XP_040137949 ⟸ XM_040282015
- Peptide Label:	isoform X3
- UniProtKB:	I3MDY4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040137944 ⟸ XM_040282010
- Peptide Label:	isoform X2
- UniProtKB:	A0A287CSL6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040137958 ⟸ XM_040282024
- Peptide Label:	isoform X5
- UniProtKB:	A0A287CSL6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000025548 ⟸ ENSSTOT00000030885

Ensembl Acc Id:

ENSSTOP00000029060 ⟸ ENSSTOT00000038502

Ensembl Acc Id:

ENSSTOP00000031716 ⟸ ENSSTOT00000038978

Ensembl Acc Id:

ENSSTOP00000024267 ⟸ ENSSTOT00000035577

Ensembl Acc Id:

ENSSTOP00000032587 ⟸ ENSSTOT00000042068

Ensembl Acc Id:

ENSSTOP00000008653 ⟸ ENSSTOT00000009644

Protein Domains

Guanylate kinase-like PDZ SH3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000009640	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000009644.3	UniProtKB/TrEMBL
	ENSSTOT00000030885.1	UniProtKB/TrEMBL
	ENSSTOT00000035577.1	UniProtKB/TrEMBL
	ENSSTOT00000038502.1	UniProtKB/TrEMBL
	ENSSTOT00000038978.1	UniProtKB/TrEMBL
	ENSSTOT00000042068.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.42.10	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	Guanylate Kinase phosphate binding domain	UniProtKB/TrEMBL
	SH3 Domains	UniProtKB/TrEMBL
InterPro	DLG1-like	UniProtKB/TrEMBL
	DLG1_PEST_dom	UniProtKB/TrEMBL
	DLG3_SH3	UniProtKB/TrEMBL
	GK/Ca_channel_bsu	UniProtKB/TrEMBL
	Guanylate_kin-like_dom	UniProtKB/TrEMBL
	Guanylate_kinase_CS	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_assoc	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	SH3-like_dom_sf	UniProtKB/TrEMBL
	SH3_domain	UniProtKB/TrEMBL
	Synaptic_Scaffolding_LAP-MAGUK	UniProtKB/TrEMBL
NCBI Gene	Dlg3	ENTREZGENE
PANTHER	DISCS LARGE	UniProtKB/TrEMBL
	DISKS LARGE HOMOLOG 3	UniProtKB/TrEMBL
Pfam	Guanylate_kin	UniProtKB/TrEMBL
	MAGUK_N_PEST	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	PDZ_assoc	UniProtKB/TrEMBL
	SH3_1	UniProtKB/TrEMBL
PIRSF	MAGUK_DLGH	UniProtKB/TrEMBL
PROSITE	GUANYLATE_KINASE_1	UniProtKB/TrEMBL
	GUANYLATE_KINASE_2	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
SMART	GuKc	UniProtKB/TrEMBL
	MAGUK_N_PEST	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50044	UniProtKB/TrEMBL
	SSF50156	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0A287CSL6	ENTREZGENE, UniProtKB/TrEMBL
	A0A287CW97	ENTREZGENE, UniProtKB/TrEMBL
	A0A287D6A7_ICTTR	UniProtKB/TrEMBL
	A0A287DDX6	ENTREZGENE, UniProtKB/TrEMBL
	A0A287DGE9_ICTTR	UniProtKB/TrEMBL
	I3MDY4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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