Symbol:
LOC101965998 (Ensembl: NOTCH2)
Name:
notch receptor 2
RGD ID:
12574204
Description:
ENCODES a protein that exhibits calcium ion binding (inferred); cis-regulatory region sequence-specific DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); INVOLVED IN activation of protein kinase B activity (ortholog); brain development (ortholog); tissue regeneration (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Acroosteolysis Dominant Type (ortholog); Alagille syndrome (ortholog); ALAGILLE SYNDROME 2 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
neurogenic locus notch homolog protein 2; notch 2; Notch2
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - PID (archival)
LOC101965998
NOTCH2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 119,911,553 - 120,069,662 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 119,911,553 - 120,100,779 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 120,454,176 - 120,612,276 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 120,255,699 - 120,413,799 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 120,166,219 - 120,324,318 NCBI Celera 1 118,684,898 - 118,760,431 (-) NCBI Celera Cytogenetic Map 1 p12 NCBI HuRef 1 118,312,713 - 118,398,477 (-) NCBI HuRef CHM1_1 1 120,569,670 - 120,727,793 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 119,924,810 - 120,082,923 (-) NCBI T2T-CHM13v2.0
Notch2 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 97,920,854 - 98,057,683 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 97,920,843 - 98,057,677 (+) Ensembl GRCm39 Ensembl GRCm38 3 98,013,538 - 98,150,367 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 98,013,527 - 98,150,361 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 97,817,461 - 97,954,290 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 98,098,943 - 98,232,854 (+) NCBI MGSCv36 mm8 Celera 3 99,412,506 - 99,549,473 (+) NCBI Celera Cytogenetic Map 3 F2.2 NCBI cM Map 3 42.42 NCBI
Notch2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 188,299,336 - 188,432,823 (+) NCBI GRCr8 mRatBN7.2 2 185,610,594 - 185,744,088 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 185,610,589 - 185,744,088 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 193,258,974 - 193,392,488 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 191,067,260 - 191,200,638 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 185,891,558 - 186,025,066 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 200,187,184 - 200,320,403 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 200,187,179 - 200,320,215 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 207,597,473 - 207,599,560 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Rnor_5.0 2 219,662,511 - 219,793,306 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 192,839,350 - 192,986,589 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 2 178,101,416 - 178,234,556 (+) NCBI Celera Cytogenetic Map 2 q34 NCBI
Notch2 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955568 1,660,731 - 1,809,173 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955568 1,660,357 - 1,812,285 (+) NCBI ChiLan1.0 ChiLan1.0
NOTCH2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 112,490,679 - 112,716,322 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 112,158,059 - 112,315,530 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 82,457,829 - 82,615,142 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 117,537,162 - 117,612,840 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 117,538,243 - 117,612,840 (+) Ensembl panpan1.1 panPan2
NOTCH2 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 56,854,825 - 57,020,157 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 56,860,429 - 57,020,857 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 56,476,088 - 56,659,161 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 57,717,260 - 57,900,443 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 57,739,989 - 57,996,124 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 56,764,520 - 56,924,479 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 56,800,478 - 56,960,572 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 57,426,245 - 57,608,931 (-) NCBI UU_Cfam_GSD_1.0
NOTCH2 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 100,981,636 - 101,150,195 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 4 100,951,522 - 101,152,348 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 110,927,023 - 110,985,673 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
NOTCH2 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 13,712,140 - 13,871,777 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 13,712,292 - 13,871,784 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666038 16,342,675 - 16,501,918 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Notch2
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000004669 ⟹ ENSSTOP00000004190
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936872 390,852 - 536,321 (+) Ensembl
RefSeq Acc Id:
XM_021720867 ⟹ XP_021576542
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405058 2,620,590 - 2,684,163 (-) NCBI SpeTri2.0 NW_004936872 454,273 - 539,544 (+) NCBI
Sequence:
TAACTTGTGCCTTCAGTCTCTTGATTCACAATTTAGTATTACTCAGATGAACCACATTACTTACTATCAGTTTTTGTACTTACGAGGCATCAGATGTTTTCATGGACTCTTCTTTTTTTTCCTACAGA
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RefSeq Acc Id:
XP_021576542 ⟸ XM_021720867
- Sequence:
MDSSFFSYRCPEGFLGEYCQHRNPCEKNRCQNGGTCVAQAMLGKATCRCAPGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKLCQWTDACLSHPCANGSTCTTVANQFSCKCL
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Ensembl Acc Id:
ENSSTOP00000004190 ⟸ ENSSTOT00000004669
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2021-03-26
LOC101965998
notch receptor 2
Notch2
notch receptor 2
Symbol and/or name change
5135510 APPROVED
2019-01-08
Notch2
notch receptor 2
notch 2
Symbol and/or name change
5135510 APPROVED
