NPPA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 2 | 84,406,317 - 84,408,115 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 84,396,073 - 84,408,385 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 80,939,561 - 80,941,359 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 85,071,241 - 85,073,039 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 2 | 85,060,271 - 85,073,309 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 2 | 81,819,847 - 81,821,645 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 82,819,771 - 82,821,568 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 83,882,545 - 83,884,343 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
NPPA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 11,845,709 - 11,847,783 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 11,845,709 - 11,848,345 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 11,905,766 - 11,907,840 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 11,828,363 - 11,830,422 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 11,840,041 - 11,842,101 | NCBI | | | | | Celera | 1 | 11,019,389 - 11,021,472 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p36.22 | NCBI | | | | | HuRef | 1 | 11,060,823 - 11,062,905 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 11,893,660 - 11,895,736 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 11,389,795 - 11,391,868 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Nppa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 148,085,179 - 148,086,531 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 148,085,179 - 148,086,536 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 148,000,722 - 148,002,074 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 148,000,722 - 148,002,079 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 147,374,855 - 147,376,176 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 146,844,546 - 146,845,867 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 150,267,117 - 150,268,440 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | E1 | NCBI | | | | | cM Map | 4 | 78.66 | NCBI | | | | |
|
Nppa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 163,712,184 - 163,713,493 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 158,429,042 - 158,430,351 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 158,429,042 - 158,430,351 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 161,145,793 - 161,147,102 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 162,973,730 - 162,975,039 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 162,930,077 - 162,931,386 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 164,808,407 - 164,809,716 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 164,808,323 - 164,809,705 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 168,466,309 - 168,467,618 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 165,074,518 - 165,075,827 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 165,084,713 - 165,086,000 (+) | NCBI | | | | | Celera | 5 | 156,710,885 - 156,712,194 (+) | NCBI | | Celera | | | RH 3.4 Map | 5 | 1106.6 | RGD | | | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
|
Nppa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955486 | 2,060,735 - 2,063,003 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955486 | 2,061,196 - 2,062,805 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
NPPA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 216,375,951 - 216,382,131 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 215,021,064 - 215,023,807 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 10,608,025 - 10,610,287 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 11,825,072 - 11,827,452 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 11,825,072 - 11,827,373 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Nppa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
NPPA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 71,918,845 - 71,921,405 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 71,919,557 - 71,921,345 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 65,829,057 - 65,830,990 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
NPPA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 119,942,412 - 119,946,211 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 119,944,532 - 119,945,917 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666054 | 23,811,217 - 23,814,235 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Nppa (Heterocephalus glaber - naked mole-rat) |
|