Symbol:
GJA5
Name:
gap junction protein alpha 5
RGD ID:
11856222
Description:
ENCODES a protein that exhibits connexin binding (ortholog); disordered domain specific binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN cell communication by chemical coupling (ortholog); cell communication by electrical coupling (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); atrial standstill 1 (ortholog); autism spectrum disorder (ortholog); FOUND IN cell projection (ortholog); connexin complex (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 101,927,011 - 101,952,954 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 101,515,393 - 101,539,948 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 123,200,111 - 123,224,626 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 112,306,880 - 112,331,358 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 112,328,337 - 112,329,413 (+) Ensembl panpan1.1 panPan2
JBrowse:
View Region in Genome Browser (JBrowse)
Model
GJA5 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 101,927,011 - 101,952,954 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 101,515,393 - 101,539,948 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 123,200,111 - 123,224,626 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 112,306,880 - 112,331,358 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 112,328,337 - 112,329,413 (+) Ensembl panpan1.1 panPan2
GJA5 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 147,756,199 - 147,773,351 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 147,756,199 - 147,773,362 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 147,228,332 - 147,245,455 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 145,694,956 - 145,712,108 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 144,453,708 - 144,457,501 NCBI Celera 1 121,738,476 - 121,755,641 (+) NCBI Celera Cytogenetic Map 1 q21.2 NCBI HuRef 1 120,641,850 - 120,658,997 (-) NCBI HuRef CHM1_1 1 149,124,325 - 149,141,488 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 147,034,309 - 147,051,468 (+) NCBI T2T-CHM13v2.0
Gja5 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 96,939,718 - 96,960,950 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 96,812,009 - 96,984,732 (+) Ensembl GRCm39 Ensembl GRCm38 3 97,032,402 - 97,053,634 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 96,904,693 - 97,077,416 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 96,836,339 - 96,857,557 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 97,117,821 - 97,139,039 (+) NCBI MGSCv36 mm8 Celera 3 98,439,607 - 98,460,828 (+) NCBI Celera Cytogenetic Map 3 F2.1 NCBI cM Map 3 42.04 NCBI
Gja5 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 187,291,227 - 187,310,770 (+) NCBI GRCr8 mRatBN7.2 2 184,602,407 - 184,621,952 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 184,564,475 - 184,621,952 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 192,244,465 - 192,263,988 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 190,042,684 - 190,062,193 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 184,877,034 - 184,896,564 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 199,162,745 - 199,184,942 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 199,162,745 - 199,184,939 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 218,648,368 - 218,669,354 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 191,824,118 - 191,843,867 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 2 191,786,871 - 191,806,619 (+) NCBI Celera 2 177,098,223 - 177,117,685 (+) NCBI Celera Cytogenetic Map 2 q34 NCBI
Gja5 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955568 635,042 - 653,349 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955568 635,319 - 652,692 (+) NCBI ChiLan1.0 ChiLan1.0
GJA5 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 58,289,327 - 58,305,315 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 58,289,327 - 58,305,315 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 57,757,715 - 57,773,685 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 59,286,062 - 59,301,971 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 59,285,495 - 59,302,023 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 58,159,018 - 58,175,010 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 58,219,654 - 58,235,621 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 58,946,248 - 58,962,243 (-) NCBI UU_Cfam_GSD_1.0
Gja5
GJA5 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 99,854,392 - 99,871,286 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 4 99,854,129 - 99,871,288 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 109,687,517 - 109,704,699 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
GJA5 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Vero_WHO_p1.0 NW_023666038 14,460,790 - 14,478,590 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Gja5
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSPPAT00000011731 ⟹ ENSPPAP00000002431
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 1 112,328,337 - 112,329,413 (+) Ensembl
RefSeq Acc Id:
XM_003809189 ⟹ XP_003809237
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 1 101,934,401 - 101,952,954 (+) NCBI NHGRI_mPanPan1 1 101,522,774 - 101,539,948 (+) NCBI Mhudiblu_PPA_v0 1 123,200,111 - 123,217,344 (-) NCBI PanPan1.1 1 112,313,948 - 112,331,358 (+) NCBI
Sequence:
TGTGAGGACAAGGACAACAGGCAGACAGACAGGGGGAGGGCTGCAGGGAGGAGGGGGCTCTGCCTCCTTGGGGGCCAGGGAAGGGGAGCACAGTGAGCTGAGGCTACGAGGAGGTGGAGGGAGGAAGA
hide sequence
RefSeq Acc Id:
XM_024926256 ⟹ XP_024782024
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 1 101,927,011 - 101,952,954 (+) NCBI NHGRI_mPanPan1 1 101,515,396 - 101,539,948 (+) NCBI Mhudiblu_PPA_v0 1 123,200,111 - 123,224,626 (-) NCBI PanPan1.1 1 112,306,880 - 112,331,358 (+) NCBI
Sequence:
CAAAGAGGCTATGAAGATGCAAAGAGAAGGCATCTGTCTAAAGCTGGCGGGCTTTGGTCTATCCCCCGAGAAGGGAATTTGGTCTATCCCCTGAGAAGGGAATCTTCATGTTAGAAGTTTTGGCATCT
hide sequence
RefSeq Acc Id:
XM_055102271 ⟹ XP_054958246
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 1 101,927,011 - 101,952,954 (+) NCBI NHGRI_mPanPan1 1 101,515,393 - 101,539,948 (+) NCBI
RefSeq Acc Id:
XM_055102272 ⟹ XP_054958247
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 1 101,938,509 - 101,952,954 (+) NCBI NHGRI_mPanPan1 1 101,526,877 - 101,539,948 (+) NCBI
RefSeq Acc Id:
XP_003809237 ⟸ XM_003809189
- UniProtKB:
A0A2R8ZBI8 (UniProtKB/TrEMBL)
- Sequence:
MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGSYEYPVA
hide sequence
RefSeq Acc Id:
XP_024782024 ⟸ XM_024926256
- UniProtKB:
A0A2R8ZBI8 (UniProtKB/TrEMBL)
- Sequence:
MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGSYEYPVA
hide sequence
Ensembl Acc Id:
ENSPPAP00000002431 ⟸ ENSPPAT00000011731
RefSeq Acc Id:
XP_054958246 ⟸ XM_055102271
- UniProtKB:
A0A2R8ZBI8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_054958247 ⟸ XM_055102272
- UniProtKB:
A0A2R8ZBI8 (UniProtKB/TrEMBL)
