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Gene: PROM1 (prominin 1) Pan paniscus

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Symbol:

PROM1

Name:

prominin 1

RGD ID:

11749759

Description:

ENCODES a protein that exhibits actinin binding (inferred); cadherin binding (inferred); cholesterol binding (inferred); INVOLVED IN retina layer formation (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); cone-rod dystrophy (ortholog); FOUND IN brush border (ortholog); cell projection (ortholog); extracellular space (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

prominin-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PROM1 (prominin 1)	NCBI	Ortholog
Mus musculus (house mouse):	Prom1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Prom1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Prom1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PROM1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Prom1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PROM1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PROM1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Prom1 (prominin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,045 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	16,444,172 - 16,587,747 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	10,405,299 - 10,519,518 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	15,702,155 - 15,816,070 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	15,702,159 - 15,815,454 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PROM1	Bonobo	diabetes mellitus		ISO	Prom1 (Rattus norvegicus)	9068941		RGD	PMID:11237753 and REF_RGD_ID:68837
PROM1	Bonobo	hepatocellular carcinoma		ISO	Prom1 (Mus musculus)	9068941	mRNA:increased expression:liver (mouse)	RGD	PMID:26569409 and REF_RGD_ID:11344640

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PROM1	Bonobo	cone-rod dystrophy		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	cone-rod dystrophy		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	cone-rod dystrophy 12		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cone-rod dystrophy 12	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	cone-rod dystrophy 2		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	fundus dystrophy		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinal dystrophy	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	genetic disease		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
PROM1	Bonobo	Joubert syndrome 1		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial aplasia of the vermis	ClinVar	PMID:28492532
PROM1	Bonobo	Leber congenital amaurosis		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16199547 more ...
PROM1	Bonobo	Leber congenital amaurosis 1		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Leber congenital amaurosis 1	ClinVar	PMID:17605048 more ...
PROM1	Bonobo	macular degeneration		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Macular dystrophy	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	optic atrophy		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Optic atrophy	ClinVar	PMID:24265693 more ...
PROM1	Bonobo	retinal macular dystrophy		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Macular dystrophy and retinal	ClinVar	PMID:23757202 more ...
PROM1	Bonobo	retinal macular dystrophy 2		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinal macular dystrophy type 2	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	retinitis pigmentosa 41		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinitis pigmentosa 41	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	Stargardt disease		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Stargardt disease	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	Stargardt disease		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Stargardt disease	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	Stargardt Disease 1		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Fundus flavimaculatus	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	Stargardt Disease 4		ISO	PROM1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10205271 more ...
PROM1	Bonobo	Usher syndrome		ISO	PROM1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Usher syndrome	ClinVar	PMID:17576681 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PROM1	Bonobo	Colonic Neoplasms		ISO	PROM1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21188121
PROM1	Bonobo	Colorectal Neoplasms		ISO	PROM1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:18829568
PROM1	Bonobo	glioblastoma		ISO	PROM1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:18679414 more ...
PROM1	Bonobo	Neoplastic Cell Transformation		ISO	PROM1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:29626521
PROM1	Bonobo	transitional cell carcinoma		ISO	PROM1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:32673656
PROM1	Bonobo	uterine carcinosarcoma		ISO	PROM1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21919130
PROM1	Bonobo	Uterine Neoplasms		ISO	PROM1 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21919130

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PROM1	Bonobo	cone-rod dystrophy 12		ISO	PROM1 (Homo sapiens)	7240710		OMIM
PROM1	Bonobo	retinal macular dystrophy 2		ISO	PROM1 (Homo sapiens)	7240710		OMIM
PROM1	Bonobo	retinitis pigmentosa 41		ISO	PROM1 (Homo sapiens)	7240710		OMIM
PROM1	Bonobo	Stargardt Disease 4		ISO	PROM1 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PROM1	Bonobo	camera-type eye photoreceptor cell differentiation	involved_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	camera-type eye photoreceptor cell differentiation	involved_in	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	glomerular parietal epithelial cell differentiation	involved_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	photoreceptor cell maintenance	involved_in	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	photoreceptor cell maintenance	involved_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	podocyte differentiation	involved_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	positive regulation of nephron tubule epithelial cell differentiation	involved_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	retina layer formation	involved_in	ISO	Prom1 (Mus musculus)	9068941	PMID:19228982	UniProt	PMID:19228982
PROM1	Bonobo	retina morphogenesis in camera-type eye	involved_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PROM1	Bonobo	apical plasma membrane	located_in	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	brush border	located_in	ISO	Prom1 (Mus musculus)	9068941	PMID:9356465	MGI	PMID:9356465
PROM1	Bonobo	cell projection	located_in	ISO	Prom1 (Mus musculus)	9068941	PMID:10587575	MGI	PMID:10587575
PROM1	Bonobo	cell surface	located_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	cell surface	located_in	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	cilium	located_in	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	endoplasmic reticulum	located_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	endoplasmic reticulum-Golgi intermediate compartment	located_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	extracellular exosome	located_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	extracellular space	located_in	ISO	Prom1 (Mus musculus)	9068941	PMID:15976444	MGI	PMID:15976444
PROM1	Bonobo	membrane	located_in	IEA	InterPro:IPR008795	150520179		InterPro	GO_REF:0000002
PROM1	Bonobo	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
PROM1	Bonobo	microvillus	located_in	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	microvillus membrane	located_in	IEA	UniProtKB-SubCell:SL-0294	150520179		UniProt	GO_REF:0000044
PROM1	Bonobo	photoreceptor outer segment	located_in	ISO	Prom1 (Mus musculus)	9068941	PMID:19228982	UniProt	PMID:19228982
PROM1	Bonobo	photoreceptor outer segment membrane	located_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	plasma membrane	located_in	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	prominosome	located_in	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	stereocilium	located_in	ISO	Prom1 (Mus musculus)	9068941	PMID:15316084	MGI	PMID:15316084

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PROM1	Bonobo	actinin binding	enables	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	cadherin binding	enables	IEA	UniProtKB:O43490 and ensembl:ENSP00000415481	150520179		Ensembl	GO_REF:0000107
PROM1	Bonobo	cholesterol binding	enables	IEA	PANTHER:PTN000506631 and PANTHER:PTN002733198	150520179		TreeGrafter	GO_REF:0000118
PROM1	Bonobo	protein binding	enables	ISO	UniProtKB:Q8VHP6	9068941	PMID:18654668	IntAct	PMID:18654668
PROM1	Bonobo	protein binding	enables	ISO	UniProtKB:Q9UHE5 and UniProtKB:Q9UHF3	9068941	PMID:24556617	UniProt	PMID:24556617
PROM1	Bonobo	protein binding	enables	ISO	UniProtKB:Q9UBN7	9068941	PMID:23084749	IntAct	PMID:23084749

PMID:30032202

PROM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,045 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	16,444,172 - 16,587,747 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	10,405,299 - 10,519,518 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	15,702,155 - 15,816,070 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	15,702,159 - 15,815,454 (-)	Ensembl	panpan1.1		panPan2

PROM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	15,968,228 - 16,084,023 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	15,963,076 - 16,084,378 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	15,969,851 - 16,085,646 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	15,578,955 - 15,686,664 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	15,646,125 - 15,753,835	NCBI
Celera	4	16,434,397 - 16,550,164 (-)	NCBI		Celera
Cytogenetic Map	4	p15.32	NCBI
HuRef	4	15,319,438 - 15,435,190 (-)	NCBI		HuRef
CHM1_1	4	15,967,639 - 16,083,574 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	15,949,919 - 16,107,700 (-)	NCBI		T2T-CHM13v2.0

Prom1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	44,150,963 - 44,260,850 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	44,150,962 - 44,259,374 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	43,993,621 - 44,102,047 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	43,993,620 - 44,102,032 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	44,384,861 - 44,492,975 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	44,281,870 - 44,389,929 (-)	NCBI		MGSCv36	mm8
Celera	5	41,422,565 - 41,530,564 (-)	NCBI		Celera
Cytogenetic Map	5	B3	NCBI
cM Map	5	23.97	NCBI

Prom1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	71,202,303 - 71,307,008 (+)	NCBI		GRCr8
mRatBN7.2	14	66,989,545 - 67,094,534 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	66,990,160 - 67,094,527 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	71,398,422 - 71,501,438 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	72,670,309 - 72,774,669 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	69,108,846 - 69,211,863 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	71,532,321 - 71,637,400 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	71,533,063 - 71,637,417 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	71,573,130 - 71,668,097 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	72,122,986 - 72,230,453 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	72,125,409 - 72,232,843 (+)	NCBI
Celera	14	65,949,815 - 66,052,606 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Prom1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955480	7,961,389 - 8,059,589 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955480	7,955,501 - 8,059,537 (+)	NCBI	ChiLan1.0	ChiLan1.0

PROM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	64,229,487 - 64,362,346 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	64,260,685 - 64,382,009 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	66,778,870 - 66,880,110 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	64,707,547 - 64,840,616 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	64,732,612 - 64,855,496 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	64,228,808 - 64,330,214 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	64,432,846 - 64,534,046 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	64,793,321 - 64,894,543 (+)	NCBI		UU_Cfam_GSD_1.0

Prom1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	58,176,590 - 58,315,536 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	11,878,012 - 12,018,177 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	11,878,261 - 12,017,228 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PROM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	11,215,663 - 11,317,312 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	11,215,659 - 11,331,442 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	10,866,626 - 10,987,214 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PROM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	34,093,699 - 34,243,630 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	34,129,532 - 34,243,778 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	80,860,464 - 80,977,347 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Prom1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	15,771,286 - 15,886,348 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	15,765,162 - 15,886,023 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_003826801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003826803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008952142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111229	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111230	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055111232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057302035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057302036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057302037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000042016 ⟹ ENSPPAP00000019259

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	15,702,159 - 15,815,454 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000042025 ⟹ ENSPPAP00000019268

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	15,702,347 - 15,811,762 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000042033 ⟹ ENSPPAP00000019275

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	15,704,997 - 15,807,710 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000042035 ⟹ ENSPPAP00000019277

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	15,704,997 - 15,807,710 (-)	Ensembl

RefSeq Acc Id:

XM_003826801 ⟹ XP_003826849

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,360,774 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,558,431 (-)	NCBI
Mhudiblu_PPA_v0	4	10,405,299 - 10,519,516 (-)	NCBI
PanPan1.1	4	15,702,157 - 15,816,070 (-)	NCBI

Sequence:

show sequence

CTAATGCGGCCGGGATGAGACAGGAGAGTTTTTAGGAGGGTAGCTGCATTCTAAGTAAGGGACTCTGCTGGGGTAAAAGAGGCGCAAGCGTTGCAAGAAGGGAGTGCAGGGCGTTGAGCAGGCACCTC
TACAGGAAATGGATGCTGTCCAGGTGCCGGTGGGCGCCCCAGGGCTACGTGGCGAAGCAGCTCAGCCGGTCCAATCAGAGTGCGTCCAGGGCTCGGGTTTCGCGATCTTTAAGTGACTGAGGCAGATC
CCCACGCGGCACCTGGCCATGCTCTCAGCTCTCCCGCCGCGGGATGGTGCCTTGAGTGAATGACCCCCTTGGAGAACATTCTTCCGCATCCCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAGAT
TCAGCAGATCCAGTGCTTCCTGCTCCTCTTCTGCCCAGGAACACGCTTGCCTTCCCCAAGGCTTCCAGAAGCTCTGAGGCAGGAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTTGCTAGCTATG
GCCCTCGTACTCGGCTCCCTGTTGCTGCTGGGGCTGTGCGGGAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGATGCTCCTAAGGCTTGGAATTATGAATTGCCTGCAACAAATTATGAGACCCA
AGACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAGTGCATATCTTTCTCTATGTGGTACAGCCGCGTGATTTCCCAGAAGATACTTTGAGAAAAGTCATACAGAAGGCATATGAATCCA
AAATTGATTATGACAAGATTGTCTACTATGAAGCAGGGATTATTCTATGCTGTGTCCTGGGGCTGCTGTTTATTATTCTGATGCCTCTGGTGGGGTATTTCTTTTGTATGTGTCGTTGCTGTAACAAA
TGTGGTGGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTCTTGGTGATTTGTATAATAATAAGCATTGGCATCTTCTATGGTTTTGTGGCAAATCA
CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAAATCAAATATATATTGGCCCAGTACAACACTACCAAGG
ACAAGGCGTTCACAGATCTGAACAGTATCAATTCAGTGCTAGGAGGCGGAATTCTTGACCGACTGAGACCCAACATCATCCCTGTTCTTGATGAGATTAAGTCCATGGCAACAGCGATCAAGGAGACC
AAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACTCAGCTTAGCAGCAGTCTGACCAGCATGAAAACTAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTTGGT
GCGTCCATCAAGTGAAATCTGCAACAGCATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAG
ATTTGGATGGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGAC
AATGTAACTCAGCGTCTTCCTATTCAGGATATACTCTCAGAATTCTCTGTTTATGTTAATAACACTGAAAGTTACATCCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGG
TGGCCTGGTCATCTGCTCTCTGCTGACCCTCATCGTGATTTTTTACTACCTGGGCTTACTGTGTGGCGTGTGTGGCTATGACAGGCATGCCACCCCAACCACCCGAGGCTGTGTCTCCAACACCGGAG
GCGTCTTCCTCATGGTTGGAGTTGGATTAAGTTTCCTGTTTTGCTGGATATTGATGATCATTGTGGTTCTTACCTTTGTCTTTGGTGCAAATGTGGAAAAACTGATCTGTGAACCTTACACGAGCAAG
GAATTATTCCAGGTTTTGGATACACCCTACTTACTAAATGAAGACTGGGAATACTATCTCTCTGGGAAGCTATTTAATAAATCAAAAATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGCAAAAA
AAATAGAGGCACTTACGGCACTCTTCACCTGCAGAACAGCTTCAATATCAGTGAACGTCTCAACATTAATGAGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTCTGAAGGTAAATCTTAATATCT
TTCTGTTGGGTGCAGCAGGAAGAAAAAACCTTCAGGATTTTGCTGCTTGTGGAATAGACAGAATGAATTATGACAGCTACTTGGCTCAGACTGGTAAATCCCCTGCAGGAGTGAATCTTTTATCATTT
GCGTATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAACTCCCTGAAAAGAGATGCACAAACTATTAAAACGATTCACCAGCAACGAGTCCTTCCTATAGAACAATCACTGAG
CACTCTATACCAAAGCGTCAAGATACTTCAACGCACAGGGAATGGATTGTTGGAGAGAGTAACTAGGATTCTAGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAACAATACTTCCTCTGTTATTA
TTGAGGAAACTAAGAAGTATGGGAGAACAATAATAGGATATTTTGAACATTATCTGCAGTGGATCGAGTTCTCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGCTCTAGATACTGCT
GTTGATGTCTTTCTGTGTAGCTACATTATCGACCCCTTGAATTTGTTTTGGTTTGGCATAGGAAAAGCTACTGTATTTTTACTTCCGGCTCTAATTTTTGCGGTAAAACTGGCTAAATACTACCGTCG
AATGGATTCGGAGGACGTGTACGATGATGTTGAAACTATACCCATGAAAAATATGGAAAATGGTAATAATGGTTATCATAAAGATCATGTATATGGTATTCACAATCCTGTTATGACAAGCCCATCAC
AACATTGATAGCTGATGTTGAAACTGCTTGAGCATCAGGAACTCAAAGTGGAAAGGATCACAGATTTTTGATAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTA
GTGACTCAGGCGGGCACCAAGGAAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCATGGTCCATCACTATTCAAGGATGACTCCCTCCCTTCCTGTCTATT
TTTGTTTTTTACTTTTTTACACTGAGTTTCTATTTAGACACTACAACATATGGGGTGTTTGTTCCCATTGGATGCATTTCTATCAAAACTCTATCAAATGTGATGGCTAGGTTCTAACATATTGCCAT
GTGTGGAGTGTGCTAAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAATGGTGTATATACCTTTTGTTACCACAGAGTTTTTTAAACAAATGAGTATTATAGGACTTTCTTCTAAA
TGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAAAATAATCCATTTTCACTAAAAGTGTGTGAAACCTACAGCATATCCTTCGTGCAGAGATTTTCATCTATTATACTTTATCAAAGATTG
GCCATGTTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGGCAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAAAGAAATGCTGTTCGTTCAAAAGTGGAGTT
GTTTTAACAGATGCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTAGGATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCTAAAATGAAATAT
GAGAAGATCCTGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATATTCATTTGCTTCAGGAGTTTCATGTTGGATCTG
TCATTATCAAAAGTGATCAGCAATGAAAAACTGGTCGGACAAAATTTAACGTTGACGTAATGAAATTCCAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGCAGATTGCAGTTCTGATTCATTTCA
ATAAAAAGGAACTTGGAAAACA

hide sequence

RefSeq Acc Id:

XM_008952142 ⟹ XP_008950390

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,360,774 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,558,431 (-)	NCBI
Mhudiblu_PPA_v0	4	10,405,299 - 10,519,516 (-)	NCBI
PanPan1.1	4	15,702,155 - 15,816,070 (-)	NCBI

Sequence:

show sequence

CTAATGCGGCCGGGATGAGACAGGAGAGTTTTTAGGAGGGTAGCTGCATTCTAAGTAAGGGACT
CTGCTGGGGTAAAAGAGGCGCAAGCGTTGCAAGAAGGGAGTGCAGGGCGTTGAGCAGGCACCTCTACAGGAAATGGATGCTGTCCAGGTGCCGGTGGGCGCCCCAGGGCTACGTGGCGAAGCAGCTCA
GCCGGTCCAATCAGAGTGCGTCCAGGGCTCGGGTTTCGCGATCTTTAAGTGACTGAGGCAGATCCCCACGCGGCACCTGGCCATGCTCTCAGCTCTCCCGCCGCGGGATGGTGCCTTGAGTGAATGAC
CCCCTTGGAGAACATTCTTCCGCATCCCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTTCCTGCTCCTCTTCTGCCCAGGAACACGCTTGCCTTCCCCAAGGCTT
CCAGAAGCTCTGAGGCAGGAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTTGCTAGCTATGGCCCTCGTACTCGGCTCCCTGTTGCTGCTGGGGCTGTGCGGGAACTCCTTTTCAGGAGGGCAGC
CTTCATCCACAGATGCTCCTAAGGCTTGGAATTATGAATTGCCTGCAACAAATTATGAGACCCAAGACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAGTGCATATCTTTCTCTATGTG
GTACAGCCGCGTGATTTCCCAGAAGATACTTTGAGAAAAGTCATACAGAAGGCATATGAATCCAAAATTGATTATGACAAGATTGTCTACTATGAAGCAGGGATTATTCTATGCTGTGTCCTGGGGCT
GCTGTTTATTATTCTGATGCCTCTGGTGGGGTATTTCTTTTGTATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAA
TCTCCCTCTTGGTGATTTGTATAATAATAAGCATTGGCATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGA
ACTCTCTTGAATGAAACTCCAGAGCAAATCAAATATATATTGGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAATTCAGTGCTAGGAGGCGGAATTCTTGACCGACT
GAGACCCAACATCATCCCTGTTCTTGATGAGATTAAGTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACTCAGCTTA
GCAGCAGTCTGACCAGCATGAAAACTAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTTGGTGCGTCCATCAAGTGAAATCTGCAACAGCATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCCT
GAACTGAGGCAGCTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAACG
CCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAATGTAACTCAGCGTCTTCCTATTCAGGATATACTCTCAGAATTCTCTGTTTATGTTAATAACA
CTGAAAGTTACATCCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGACCCTCATCGTGATTTTTTACTACCTGGGCTTACTGTGT
GGCGTGTGTGGCTATGACAGGCATGCCACCCCAACCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGATTAAGTTTCCTGTTTTGCTGGATATTGATGATCATTGT
GGTTCTTACCTTTGTCTTTGGTGCAAATGTGGAAAAACTGATCTGTGAACCTTACACGAGCAAGGAATTATTCCAGGTTTTGGATACACCCTACTTACTAAATGAAGACTGGGAATACTATCTCTCTG
GGAAGCTATTTAATAAATCAAAAATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGCAAAAAAAATAGAGGCACTTACGGCACTCTTCACCTGCAGAACAGCTTCAATATCAGTGAACGTCTCAAC
ATTAATGAGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTCTGAAGGTAAATCTTAATATCTTTCTGTTGGGTGCAGCAGGAAGAAAAAACCTTCAGGATTTTGCTGCTTGTGGAATAGACAGAAT
GAATTATGACAGCTACTTGGCTCAGACTGGTAAATCCCCTGCAGGAGTGAATCTTTTATCATTTGCGTATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAACTCCCTGAAAA
GAGATGCACAAACTATTAAAACGATTCACCAGCAACGAGTCCTTCCTATAGAACAATCACTGAGCACTCTATACCAAAGCGTCAAGATACTTCAACGCACAGGGAATGGATTGTTGGAGAGAGTAACT
AGGATTCTAGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAACAATACTTCCTCTGTTATTATTGAGGAAACTAAGAAGTATGGGAGAACAATAATAGGATATTTTGAACATTATCTGCAGTGGAT
CGAGTTCTCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGCTCTAGATACTGCTGTTGATGTCTTTCTGTGTAGCTACATTATCGACCCCTTGAATTTGTTTTGGTTTGGCATAGGAA
AAGCTACTGTATTTTTACTTCCGGCTCTAATTTTTGCGGTAAAACTGGCTAAATACTACCGTCGAATGGATTCGGAGGACGTGTACGATGACCCATCACAACATTGATAGCTGATGTTGAAACTGCTT
GAGCATCAGGAACTCAAAGTGGAAAGGATCACAGATTTTTGATAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGAAACGGC
ACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCATGGTCCATCACTATTCAAGGATGACTCCCTCCCTTCCTGTCTATTTTTGTTTTTTACTTTTTTACACTGAGTTT
CTATTTAGACACTACAACATATGGGGTGTTTGTTCCCATTGGATGCATTTCTATCAAAACTCTATCAAATGTGATGGCTAGGTTCTAACATATTGCCATGTGTGGAGTGTGCTAAACACACACCAGTT
TACAGGAAAGATGCATTTTGTGTACAGTAAATGGTGTATATACCTTTTGTTACCACAGAGTTTTTTAAACAAATGAGTATTATAGGACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTT
GGTGCTGTTGAAAATAATCCATTTTCACTAAAAGTGTGTGAAACCTACAGCATATCCTTCGTGCAGAGATTTTCATCTATTATACTTTATCAAAGATTGGCCATGTTCCACTTGGAAATGGCATGCAA
AAGCAATCATAGAGAAACCTGCGTAACTCCATCTGGCAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAAAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGCCAATTACGGTGTACA
GTTTAACAGAGTTTTCTGTTGCATTAGGATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCTAAAATGAAATATGAGAAGATCCTGTCACAATTCTTAGATCT
GGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATATTCATTTGCTTCAGGAGTTTCATGTTGGATCTGTCATTATCAAAAGTGATCAGCAATGAAAA
ACTGGTCGGACAAAATTTAACGTTGACGTAATGAAATTCCAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGCAGATTGCAGTTCTGATTCATTTCAATAAAAAGGAACTTGGAAAACATG

hide sequence

RefSeq Acc Id:

XM_034958329 ⟹ XP_034814220

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,360,119 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,557,777 (-)	NCBI
Mhudiblu_PPA_v0	4	10,405,299 - 10,518,859 (-)	NCBI

RefSeq Acc Id:

XM_034958331 ⟹ XP_034814222

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,354,462 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,552,119 (-)	NCBI
Mhudiblu_PPA_v0	4	10,405,299 - 10,511,490 (-)	NCBI

RefSeq Acc Id:

XM_034958335 ⟹ XP_034814226

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,360,775 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,558,432 (-)	NCBI
Mhudiblu_PPA_v0	4	10,405,299 - 10,519,518 (-)	NCBI

RefSeq Acc Id:

XM_034958337 ⟹ XP_034814228

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,360,118 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,557,775 (-)	NCBI
Mhudiblu_PPA_v0	4	10,405,299 - 10,518,858 (-)	NCBI

RefSeq Acc Id:

XM_055111208 ⟹ XP_054967183

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,993 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,649 (-)	NCBI

RefSeq Acc Id:

XM_055111209 ⟹ XP_054967184

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,045 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,587,747 (-)	NCBI

RefSeq Acc Id:

XM_055111210 ⟹ XP_054967185

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,358,736 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,556,393 (-)	NCBI

RefSeq Acc Id:

XM_055111211 ⟹ XP_054967186

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,354,462 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,552,119 (-)	NCBI

RefSeq Acc Id:

XM_055111212 ⟹ XP_054967187

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,993 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,650 (-)	NCBI

RefSeq Acc Id:

XM_055111213 ⟹ XP_054967188

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,993 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,650 (-)	NCBI

RefSeq Acc Id:

XM_055111214 ⟹ XP_054967189

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,026 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,587,728 (-)	NCBI

RefSeq Acc Id:

XM_055111215 ⟹ XP_054967190

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,993 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,650 (-)	NCBI

RefSeq Acc Id:

XM_055111216 ⟹ XP_054967191

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,993 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,650 (-)	NCBI

RefSeq Acc Id:

XM_055111217 ⟹ XP_054967192

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,993 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,649 (-)	NCBI

RefSeq Acc Id:

XM_055111218 ⟹ XP_054967193

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,993 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,649 (-)	NCBI

RefSeq Acc Id:

XM_055111219 ⟹ XP_054967194

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,035 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,587,737 (-)	NCBI

RefSeq Acc Id:

XM_055111220 ⟹ XP_054967195

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,017 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,587,719 (-)	NCBI

RefSeq Acc Id:

XM_055111221 ⟹ XP_054967196

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,354,462 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,552,119 (-)	NCBI

RefSeq Acc Id:

XM_055111222 ⟹ XP_054967197

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,035 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,587,737 (-)	NCBI

RefSeq Acc Id:

XM_055111223 ⟹ XP_054967198

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,035 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,587,737 (-)	NCBI

RefSeq Acc Id:

XM_055111224 ⟹ XP_054967199

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,358,731 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,556,372 (-)	NCBI

RefSeq Acc Id:

XM_055111225 ⟹ XP_054967200

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,990 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,644 (-)	NCBI

RefSeq Acc Id:

XM_055111226 ⟹ XP_054967201

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,990 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,644 (-)	NCBI

RefSeq Acc Id:

XM_055111227 ⟹ XP_054967202

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,358,756 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,556,416 (-)	NCBI

RefSeq Acc Id:

XM_055111228 ⟹ XP_054967203

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,990 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,644 (-)	NCBI

RefSeq Acc Id:

XM_055111229 ⟹ XP_054967204

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,390,035 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,587,737 (-)	NCBI

RefSeq Acc Id:

XM_055111230 ⟹ XP_054967205

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,358,730 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,556,369 (-)	NCBI

RefSeq Acc Id:

XM_055111231 ⟹ XP_054967206

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,990 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,644 (-)	NCBI

RefSeq Acc Id:

XM_055111232 ⟹ XP_054967207

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,356,990 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,554,644 (-)	NCBI

RefSeq Acc Id:

XM_057302035 ⟹ XP_057158018

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,360,775 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,558,432 (-)	NCBI

RefSeq Acc Id:

XM_057302036 ⟹ XP_057158019

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,360,118 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,557,775 (-)	NCBI

RefSeq Acc Id:

XM_057302037 ⟹ XP_057158020

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	16,246,553 - 16,359,788 (-)	NCBI
NHGRI_mPanPan1	4	16,444,172 - 16,557,441 (-)	NCBI


Protein RefSeqs	XP_003826849	(Get FASTA)	NCBI Sequence Viewer
	XP_008950390	(Get FASTA)	NCBI Sequence Viewer
	XP_034814220	(Get FASTA)	NCBI Sequence Viewer
	XP_034814222	(Get FASTA)	NCBI Sequence Viewer
	XP_034814226	(Get FASTA)	NCBI Sequence Viewer
	XP_034814228	(Get FASTA)	NCBI Sequence Viewer
	XP_054967183	(Get FASTA)	NCBI Sequence Viewer
	XP_054967184	(Get FASTA)	NCBI Sequence Viewer
	XP_054967185	(Get FASTA)	NCBI Sequence Viewer
	XP_054967186	(Get FASTA)	NCBI Sequence Viewer
	XP_054967187	(Get FASTA)	NCBI Sequence Viewer
	XP_054967188	(Get FASTA)	NCBI Sequence Viewer
	XP_054967189	(Get FASTA)	NCBI Sequence Viewer
	XP_054967190	(Get FASTA)	NCBI Sequence Viewer
	XP_054967191	(Get FASTA)	NCBI Sequence Viewer
	XP_054967192	(Get FASTA)	NCBI Sequence Viewer
	XP_054967193	(Get FASTA)	NCBI Sequence Viewer
	XP_054967194	(Get FASTA)	NCBI Sequence Viewer
	XP_054967195	(Get FASTA)	NCBI Sequence Viewer
	XP_054967196	(Get FASTA)	NCBI Sequence Viewer
	XP_054967197	(Get FASTA)	NCBI Sequence Viewer
	XP_054967198	(Get FASTA)	NCBI Sequence Viewer
	XP_054967199	(Get FASTA)	NCBI Sequence Viewer
	XP_054967200	(Get FASTA)	NCBI Sequence Viewer
	XP_054967201	(Get FASTA)	NCBI Sequence Viewer
	XP_054967202	(Get FASTA)	NCBI Sequence Viewer
	XP_054967203	(Get FASTA)	NCBI Sequence Viewer
	XP_054967204	(Get FASTA)	NCBI Sequence Viewer
	XP_054967205	(Get FASTA)	NCBI Sequence Viewer
	XP_054967206	(Get FASTA)	NCBI Sequence Viewer
	XP_054967207	(Get FASTA)	NCBI Sequence Viewer
	XP_057158018	(Get FASTA)	NCBI Sequence Viewer
	XP_057158019	(Get FASTA)	NCBI Sequence Viewer
	XP_057158020	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000019259.1
	ENSPPAP00000019268.1
	ENSPPAP00000019275.1
	ENSPPAP00000019277.1

RefSeq Acc Id:	XP_008950390 ⟸ XM_008952142
- Peptide Label:	isoform X6
- UniProtKB:	A0A2R9APH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVHIFLYVVQPRDFPEDTLRKVIQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYFFCMCRCCN KCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIKSMATAIKE TKEALENMNSTLKSLHQQSTQLSSSLTSMKTSLRSSLNDPLCLVRPSSEICNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDI DNVTQRLPIQDILSEFSVYVNNTESYIHRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGGVFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTS KELFQVLDTPYLLNEDWEYYLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISERLNINEHTGSISSELESLKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLS FAYDLEAKANSLPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASLDFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDT AVDVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDPSQH hide sequence

RefSeq Acc Id:	XP_003826849 ⟸ XM_003826801
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9AWA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVHIFLY VVQPRDFPEDTLRKVIQKAYESKIDYDKIVYYEAGIILCCVLGLLFIILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSNFKDL RTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSMKTSLRSSLNDPLCLVRPSSEICNSIRLSLSQLNSN PELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSEFSVYVNNTESYIHRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLL CGVCGYDRHATPTTRGCVSNTGGVFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFQVLDTPYLLNEDWEYYLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISERL NINEHTGSISSELESLKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANSLPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERV TRILASLDFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVDVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNMEN GNNGYHKDHVYGIHNPVMTSPSQH hide sequence

RefSeq Acc Id:	XP_034814226 ⟸ XM_034958335
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R9APH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034814220 ⟸ XM_034958329
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9AQ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034814228 ⟸ XM_034958337
- Peptide Label:	isoform X6
- UniProtKB:	A0A2R9APH5 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000032761	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000042016.1	UniProtKB/TrEMBL
	ENSPPAT00000042025.1	UniProtKB/TrEMBL
	ENSPPAT00000042033.1	UniProtKB/TrEMBL
	ENSPPAT00000042035.1	UniProtKB/TrEMBL
InterPro	Prominin	UniProtKB/TrEMBL
KEGG Report	pps:100975958	UniProtKB/TrEMBL
NCBI Gene	PROM1	ENTREZGENE
PANTHER	PROMININ-1	UniProtKB/TrEMBL
	PTHR22730	UniProtKB/TrEMBL
Pfam	Prominin	UniProtKB/TrEMBL
UniProt	A0A2R9APH5	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9AQ27	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9AU33	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9AWA6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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